2024-07-27 21:05:14,380 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 21:05:14,693 Running on GPU
2024-07-27 21:05:17,011 Found 6 citations for tools or databases
2024-07-27 21:05:17,011 Query 1/1: THRA_KLHL42 (length 995)
2024-07-27 21:05:17,434 Sleeping for 9s. Reason: PENDING
2024-07-27 21:05:26,900 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:05:37,340 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:05:47,775 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:05:53,222 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:05:58,652 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:06:09,112 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:06:14,537 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:06:20,968 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:06:31,438 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:06:41,881 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:06:47,314 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:06:56,733 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:07:04,159 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:07:12,590 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:07:23,849 Sleeping for 5s. Reason: PENDING
2024-07-27 21:07:29,302 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:07:35,765 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:07:47,213 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:07:56,663 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:08:06,096 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:08:16,555 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:08:23,982 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:08:31,416 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:08:36,849 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:08:47,504 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:08:52,927 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:09:04,225 Setting max_seq=508, max_extra_seq=2048
2024-07-27 21:12:28,506 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.4 pTM=0.503 ipTM=0.164
2024-07-27 21:12:50,977 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.4 pTM=0.5 ipTM=0.165 tol=24.3
2024-07-27 21:13:13,478 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.5 pTM=0.519 ipTM=0.342 tol=7.49
2024-07-27 21:13:36,083 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.5 pTM=0.493 ipTM=0.179 tol=10.1
2024-07-27 21:13:58,701 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.5 pTM=0.501 ipTM=0.168 tol=7.92
2024-07-27 21:14:21,316 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.8 pTM=0.494 ipTM=0.163 tol=12.3
2024-07-27 21:14:43,941 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.8 pTM=0.496 ipTM=0.185 tol=13.6
2024-07-27 21:15:06,615 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.9 pTM=0.502 ipTM=0.151 tol=19.7
2024-07-27 21:15:29,261 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.6 pTM=0.519 ipTM=0.166 tol=6.44
2024-07-27 21:15:51,914 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.1 pTM=0.522 ipTM=0.196 tol=5.28
2024-07-27 21:16:14,590 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.3 pTM=0.518 ipTM=0.163 tol=4.23
2024-07-27 21:16:37,289 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.8 pTM=0.518 ipTM=0.163 tol=3.34
2024-07-27 21:17:00,001 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.3 pTM=0.518 ipTM=0.164 tol=3.86
2024-07-27 21:17:22,723 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.2 pTM=0.513 ipTM=0.155 tol=3.27
2024-07-27 21:17:45,442 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.2 pTM=0.514 ipTM=0.161 tol=2.13
2024-07-27 21:18:08,162 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.7 pTM=0.508 ipTM=0.147 tol=3.59
2024-07-27 21:18:30,883 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.4 pTM=0.509 ipTM=0.15 tol=2.93
2024-07-27 21:18:53,633 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.4 pTM=0.505 ipTM=0.144 tol=2.25
2024-07-27 21:19:16,345 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=65.8 pTM=0.514 ipTM=0.163 tol=8.11
2024-07-27 21:19:39,106 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.9 pTM=0.507 ipTM=0.144 tol=4.62
2024-07-27 21:20:01,837 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.4 pTM=0.515 ipTM=0.16 tol=4.05
2024-07-27 21:20:24,568 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.2 pTM=0.517 ipTM=0.177 tol=3
2024-07-27 21:20:47,282 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.5 pTM=0.511 ipTM=0.149 tol=3.45
2024-07-27 21:21:09,959 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.4 pTM=0.51 ipTM=0.148 tol=3.87
2024-07-27 21:21:32,660 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.4 pTM=0.516 ipTM=0.161 tol=3.47
2024-07-27 21:21:55,371 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.1 pTM=0.511 ipTM=0.149 tol=3.04
2024-07-27 21:22:18,039 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.4 pTM=0.516 ipTM=0.16 tol=2.69
2024-07-27 21:22:40,751 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.7 pTM=0.506 ipTM=0.145 tol=7.63
2024-07-27 21:23:03,416 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.3 pTM=0.516 ipTM=0.166 tol=9.7
2024-07-27 21:23:26,122 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.1 pTM=0.522 ipTM=0.211 tol=2.65
2024-07-27 21:23:48,869 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.2 pTM=0.513 ipTM=0.153 tol=3.76
2024-07-27 21:23:48,870 alphafold2_multimer_v3_model_1_seed_000 took 881.1s (30 recycles)
2024-07-27 21:24:12,207 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.9 pTM=0.6 ipTM=0.376
2024-07-27 21:24:34,962 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.8 pTM=0.543 ipTM=0.228 tol=10.3
2024-07-27 21:24:57,690 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.5 pTM=0.521 ipTM=0.183 tol=4.95
2024-07-27 21:25:20,444 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.8 pTM=0.508 ipTM=0.157 tol=5.9
2024-07-27 21:25:43,229 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.1 pTM=0.498 ipTM=0.14 tol=4.41
2024-07-27 21:26:06,027 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.7 pTM=0.501 ipTM=0.136 tol=14.4
2024-07-27 21:26:28,766 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.3 pTM=0.508 ipTM=0.145 tol=10.8
2024-07-27 21:26:51,481 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.7 pTM=0.514 ipTM=0.139 tol=4.29
2024-07-27 21:27:14,217 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.6 pTM=0.517 ipTM=0.144 tol=2.75
2024-07-27 21:27:36,978 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.1 pTM=0.52 ipTM=0.146 tol=2.08
2024-07-27 21:27:59,796 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.2 pTM=0.52 ipTM=0.147 tol=1.95
2024-07-27 21:28:22,615 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.4 pTM=0.521 ipTM=0.151 tol=2.73
2024-07-27 21:28:45,426 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.4 pTM=0.521 ipTM=0.15 tol=2.34
2024-07-27 21:29:08,233 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.4 pTM=0.521 ipTM=0.153 tol=3.15
2024-07-27 21:29:31,040 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.6 pTM=0.522 ipTM=0.155 tol=4.11
2024-07-27 21:29:53,875 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.6 pTM=0.521 ipTM=0.152 tol=4.18
2024-07-27 21:30:16,690 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68 pTM=0.524 ipTM=0.159 tol=3.86
2024-07-27 21:30:39,500 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.3 pTM=0.522 ipTM=0.157 tol=2.86
2024-07-27 21:31:02,315 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.1 pTM=0.519 ipTM=0.15 tol=3.12
2024-07-27 21:31:25,129 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.2 pTM=0.52 ipTM=0.152 tol=2.9
2024-07-27 21:31:47,961 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.3 pTM=0.521 ipTM=0.15 tol=2.75
2024-07-27 21:32:10,785 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.6 pTM=0.519 ipTM=0.149 tol=2.18
2024-07-27 21:32:33,609 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.4 pTM=0.521 ipTM=0.151 tol=2.77
2024-07-27 21:32:56,428 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.6 pTM=0.522 ipTM=0.154 tol=2.42
2024-07-27 21:33:19,234 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.6 pTM=0.523 ipTM=0.154 tol=2.49
2024-07-27 21:33:42,035 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.4 pTM=0.521 ipTM=0.151 tol=1.57
2024-07-27 21:34:04,817 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.1 pTM=0.521 ipTM=0.154 tol=2.77
2024-07-27 21:34:27,573 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.4 pTM=0.523 ipTM=0.157 tol=1.88
2024-07-27 21:34:50,340 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.3 pTM=0.523 ipTM=0.157 tol=2.65
2024-07-27 21:35:13,143 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.6 pTM=0.525 ipTM=0.157 tol=2.21
2024-07-27 21:35:35,940 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.4 pTM=0.525 ipTM=0.157 tol=2.19
2024-07-27 21:35:35,941 alphafold2_multimer_v3_model_2_seed_000 took 706.5s (30 recycles)
2024-07-27 21:35:59,314 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.7 pTM=0.532 ipTM=0.197
2024-07-27 21:36:22,043 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.2 pTM=0.525 ipTM=0.174 tol=9.16
2024-07-27 21:36:44,837 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.2 pTM=0.509 ipTM=0.152 tol=6.11
2024-07-27 21:37:07,610 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.7 pTM=0.503 ipTM=0.147 tol=8.78
2024-07-27 21:37:30,402 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.5 pTM=0.508 ipTM=0.148 tol=10.8
2024-07-27 21:37:53,203 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.9 pTM=0.514 ipTM=0.16 tol=4.95
2024-07-27 21:38:16,046 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.4 pTM=0.507 ipTM=0.139 tol=6.52
2024-07-27 21:38:38,850 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.2 pTM=0.513 ipTM=0.158 tol=6.49
2024-07-27 21:39:01,675 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.3 pTM=0.513 ipTM=0.153 tol=7.43
2024-07-27 21:39:24,479 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.2 pTM=0.517 ipTM=0.162 tol=6.81
2024-07-27 21:39:47,298 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.6 pTM=0.511 ipTM=0.155 tol=8.66
2024-07-27 21:40:10,094 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.4 pTM=0.509 ipTM=0.148 tol=5.91
2024-07-27 21:40:32,952 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.6 pTM=0.504 ipTM=0.138 tol=5.08
2024-07-27 21:40:55,762 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.9 pTM=0.514 ipTM=0.148 tol=6.56
2024-07-27 21:41:18,592 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.8 pTM=0.507 ipTM=0.145 tol=6.83
2024-07-27 21:41:41,380 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.8 pTM=0.518 ipTM=0.159 tol=4.14
2024-07-27 21:42:04,176 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.2 pTM=0.512 ipTM=0.156 tol=6.36
2024-07-27 21:42:26,966 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.8 pTM=0.521 ipTM=0.161 tol=6.18
2024-07-27 21:42:49,732 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.4 pTM=0.513 ipTM=0.153 tol=6.08
2024-07-27 21:43:12,464 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.1 pTM=0.519 ipTM=0.168 tol=4.81
2024-07-27 21:43:35,186 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.2 pTM=0.515 ipTM=0.16 tol=3.68
2024-07-27 21:43:57,869 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.7 pTM=0.52 ipTM=0.169 tol=3.69
2024-07-27 21:44:20,575 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.2 pTM=0.521 ipTM=0.172 tol=3.9
2024-07-27 21:44:43,265 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.8 pTM=0.519 ipTM=0.159 tol=4.96
2024-07-27 21:45:05,940 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.9 pTM=0.518 ipTM=0.165 tol=3.68
2024-07-27 21:45:28,671 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.3 pTM=0.519 ipTM=0.17 tol=2.96
2024-07-27 21:45:51,397 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.3 pTM=0.519 ipTM=0.167 tol=2.96
2024-07-27 21:46:14,135 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.2 pTM=0.516 ipTM=0.167 tol=3.17
2024-07-27 21:46:36,869 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.1 pTM=0.517 ipTM=0.172 tol=3.13
2024-07-27 21:46:59,561 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.8 pTM=0.522 ipTM=0.172 tol=2.68
2024-07-27 21:47:22,275 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.7 pTM=0.522 ipTM=0.171 tol=1.64
2024-07-27 21:47:22,276 alphafold2_multimer_v3_model_3_seed_000 took 705.7s (30 recycles)
2024-07-27 21:47:45,561 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.9 pTM=0.521 ipTM=0.166
2024-07-27 21:48:08,402 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.8 pTM=0.506 ipTM=0.136 tol=14.5
2024-07-27 21:48:31,131 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.1 pTM=0.511 ipTM=0.155 tol=19.8
2024-07-27 21:48:53,845 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.4 pTM=0.526 ipTM=0.165 tol=7.95
2024-07-27 21:49:16,614 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.1 pTM=0.526 ipTM=0.164 tol=7.05
2024-07-27 21:49:39,408 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.8 pTM=0.528 ipTM=0.165 tol=6.16
2024-07-27 21:50:02,157 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.5 pTM=0.531 ipTM=0.169 tol=4.92
2024-07-27 21:50:24,851 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.2 pTM=0.543 ipTM=0.217 tol=7.64
2024-07-27 21:50:47,584 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66.5 pTM=0.53 ipTM=0.17 tol=6.19
2024-07-27 21:51:10,307 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.9 pTM=0.532 ipTM=0.171 tol=2.33
2024-07-27 21:51:33,046 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.7 pTM=0.529 ipTM=0.165 tol=3.28
2024-07-27 21:51:55,782 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.4 pTM=0.529 ipTM=0.167 tol=2.57
2024-07-27 21:52:18,523 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.3 pTM=0.528 ipTM=0.164 tol=1.58
2024-07-27 21:52:41,272 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.1 pTM=0.529 ipTM=0.168 tol=2.15
2024-07-27 21:53:04,043 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=66.1 pTM=0.528 ipTM=0.164 tol=1.92
2024-07-27 21:53:26,806 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.2 pTM=0.531 ipTM=0.169 tol=1.97
2024-07-27 21:53:49,574 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.4 pTM=0.53 ipTM=0.167 tol=2.05
2024-07-27 21:54:12,332 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.1 pTM=0.53 ipTM=0.171 tol=2.44
2024-07-27 21:54:35,095 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.2 pTM=0.528 ipTM=0.165 tol=2.6
2024-07-27 21:54:57,863 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.2 pTM=0.533 ipTM=0.174 tol=2.25
2024-07-27 21:55:20,611 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66 pTM=0.53 ipTM=0.168 tol=2.29
2024-07-27 21:55:43,337 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66 pTM=0.535 ipTM=0.178 tol=2.51
2024-07-27 21:56:06,086 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.4 pTM=0.532 ipTM=0.172 tol=4.05
2024-07-27 21:56:28,827 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.7 pTM=0.534 ipTM=0.175 tol=2.99
2024-07-27 21:56:51,569 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.2 pTM=0.53 ipTM=0.17 tol=3.47
2024-07-27 21:57:14,314 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.4 pTM=0.529 ipTM=0.173 tol=2.58
2024-07-27 21:57:37,068 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.4 pTM=0.527 ipTM=0.163 tol=3.17
2024-07-27 21:57:59,803 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.5 pTM=0.531 ipTM=0.169 tol=3.19
2024-07-27 21:58:22,512 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.1 pTM=0.538 ipTM=0.217 tol=6.79
2024-07-27 21:58:45,288 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.1 pTM=0.531 ipTM=0.167 tol=3.94
2024-07-27 21:59:08,068 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.5 pTM=0.531 ipTM=0.168 tol=2.8
2024-07-27 21:59:08,069 alphafold2_multimer_v3_model_4_seed_000 took 705.2s (30 recycles)
2024-07-27 21:59:31,360 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.2 pTM=0.578 ipTM=0.4
2024-07-27 21:59:54,100 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.2 pTM=0.519 ipTM=0.161 tol=13.5
2024-07-27 22:00:16,877 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.2 pTM=0.512 ipTM=0.149 tol=7.83
2024-07-27 22:00:39,642 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.6 pTM=0.54 ipTM=0.39 tol=9.65
2024-07-27 22:01:02,404 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70 pTM=0.574 ipTM=0.64 tol=6.56
2024-07-27 22:01:25,187 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.9 pTM=0.572 ipTM=0.637 tol=4.73
2024-07-27 22:01:47,986 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70 pTM=0.572 ipTM=0.616 tol=3.6
2024-07-27 22:02:10,767 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.7 pTM=0.57 ipTM=0.622 tol=3.57
2024-07-27 22:02:33,544 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.8 pTM=0.574 ipTM=0.654 tol=2.05
2024-07-27 22:02:56,300 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.6 pTM=0.57 ipTM=0.627 tol=2.6
2024-07-27 22:03:19,052 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.8 pTM=0.573 ipTM=0.642 tol=2.68
2024-07-27 22:03:41,821 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.7 pTM=0.573 ipTM=0.642 tol=3.59
2024-07-27 22:04:04,559 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.8 pTM=0.573 ipTM=0.645 tol=2.07
2024-07-27 22:04:27,350 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.7 pTM=0.572 ipTM=0.641 tol=2.83
2024-07-27 22:04:50,116 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.6 pTM=0.572 ipTM=0.65 tol=1.95
2024-07-27 22:05:12,888 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.8 pTM=0.574 ipTM=0.654 tol=4.33
2024-07-27 22:05:35,664 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.5 pTM=0.575 ipTM=0.662 tol=1.71
2024-07-27 22:05:58,446 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.6 pTM=0.573 ipTM=0.652 tol=3.08
2024-07-27 22:06:21,238 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.4 pTM=0.571 ipTM=0.633 tol=3.52
2024-07-27 22:06:44,038 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.5 pTM=0.572 ipTM=0.638 tol=2.06
2024-07-27 22:07:06,833 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.4 pTM=0.573 ipTM=0.655 tol=1.58
2024-07-27 22:07:29,623 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.6 pTM=0.572 ipTM=0.638 tol=1.44
2024-07-27 22:07:52,376 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.8 pTM=0.576 ipTM=0.67 tol=1.86
2024-07-27 22:08:15,126 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.8 pTM=0.578 ipTM=0.687 tol=1.74
2024-07-27 22:08:37,879 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.7 pTM=0.576 ipTM=0.669 tol=1.28
2024-07-27 22:09:00,622 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.6 pTM=0.574 ipTM=0.661 tol=1.51
2024-07-27 22:09:23,364 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.4 pTM=0.572 ipTM=0.65 tol=1.13
2024-07-27 22:09:46,131 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.6 pTM=0.571 ipTM=0.638 tol=1.32
2024-07-27 22:10:08,850 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.4 pTM=0.572 ipTM=0.644 tol=1.4
2024-07-27 22:10:31,557 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.4 pTM=0.57 ipTM=0.629 tol=3.11
2024-07-27 22:10:54,331 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.5 pTM=0.574 ipTM=0.646 tol=2.4
2024-07-27 22:10:54,332 alphafold2_multimer_v3_model_5_seed_000 took 705.7s (30 recycles)
2024-07-27 22:10:54,938 reranking models by 'multimer' metric
2024-07-27 22:10:58,259 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 22:12:34,555 Relaxation took 99.6s
2024-07-27 22:12:34,556 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.5 pTM=0.574 ipTM=0.646
2024-07-27 22:14:26,114 Relaxation took 111.6s
2024-07-27 22:14:26,114 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.7 pTM=0.522 ipTM=0.171
2024-07-27 22:16:02,450 Relaxation took 96.3s
2024-07-27 22:16:02,450 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.5 pTM=0.531 ipTM=0.168
2024-07-27 22:17:32,606 Relaxation took 90.2s
2024-07-27 22:17:32,606 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.4 pTM=0.525 ipTM=0.157
2024-07-27 22:19:35,180 Relaxation took 122.6s
2024-07-27 22:19:35,180 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.2 pTM=0.513 ipTM=0.153
2024-07-27 22:19:37,366 Done