2024-07-27 21:12:54,495 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 21:12:54,889 Running on GPU
2024-07-27 21:12:58,313 Found 6 citations for tools or databases
2024-07-27 21:12:58,313 Query 1/1: TMEM161A_FBXL2 (length 902)
2024-07-27 21:12:58,809 Sleeping for 5s. Reason: PENDING
2024-07-27 21:13:04,273 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:13:09,690 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:13:16,140 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:13:23,606 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:13:29,046 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:13:38,471 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:13:46,888 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:13:55,490 Sleeping for 7s. Reason: PENDING
2024-07-27 21:14:02,916 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:14:09,338 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:14:18,771 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:14:24,217 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:14:32,632 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:14:40,067 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:14:53,701 Setting max_seq=508, max_extra_seq=2048
2024-07-27 21:18:37,577 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=80.8 pTM=0.573 ipTM=0.349
2024-07-27 21:18:58,844 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.9 pTM=0.555 ipTM=0.251 tol=2.24
2024-07-27 21:19:20,151 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=79.9 pTM=0.555 ipTM=0.237 tol=2.21
2024-07-27 21:19:41,485 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=80.4 pTM=0.552 ipTM=0.244 tol=0.778
2024-07-27 21:20:02,845 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=80.4 pTM=0.549 ipTM=0.246 tol=0.731
2024-07-27 21:20:24,191 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=80.4 pTM=0.551 ipTM=0.246 tol=0.477
2024-07-27 21:20:24,192 alphafold2_multimer_v3_model_1_seed_000 took 323.5s (5 recycles)
2024-07-27 21:20:46,285 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=80.2 pTM=0.568 ipTM=0.322
2024-07-27 21:21:07,713 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80.6 pTM=0.569 ipTM=0.271 tol=1.04
2024-07-27 21:21:29,127 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.7 pTM=0.556 ipTM=0.252 tol=1.28
2024-07-27 21:21:50,537 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.7 pTM=0.554 ipTM=0.25 tol=0.709
2024-07-27 21:22:11,976 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=81.4 pTM=0.552 ipTM=0.231 tol=0.519
2024-07-27 21:22:33,376 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=81.1 pTM=0.551 ipTM=0.248 tol=0.299
2024-07-27 21:22:33,376 alphafold2_multimer_v3_model_2_seed_000 took 128.5s (5 recycles)
2024-07-27 21:22:55,470 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=79.1 pTM=0.555 ipTM=0.216
2024-07-27 21:23:16,911 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=80.8 pTM=0.646 ipTM=0.445 tol=5.85
2024-07-27 21:23:38,374 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=80.4 pTM=0.653 ipTM=0.449 tol=2.16
2024-07-27 21:23:59,799 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=81.1 pTM=0.671 ipTM=0.497 tol=0.629
2024-07-27 21:24:21,232 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80.4 pTM=0.652 ipTM=0.46 tol=0.675
2024-07-27 21:24:42,649 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=80.8 pTM=0.664 ipTM=0.483 tol=0.598
2024-07-27 21:25:04,086 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.5 pTM=0.648 ipTM=0.448 tol=0.506
2024-07-27 21:25:25,524 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=80.2 pTM=0.641 ipTM=0.431 tol=0.543
2024-07-27 21:25:46,971 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=80.4 pTM=0.648 ipTM=0.447 tol=0.387
2024-07-27 21:25:46,972 alphafold2_multimer_v3_model_3_seed_000 took 193.0s (8 recycles)
2024-07-27 21:26:09,116 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.8 pTM=0.729 ipTM=0.619
2024-07-27 21:26:30,642 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=78.8 pTM=0.57 ipTM=0.227 tol=6.91
2024-07-27 21:26:52,111 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=79.9 pTM=0.605 ipTM=0.331 tol=6.7
2024-07-27 21:27:13,570 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=80.8 pTM=0.641 ipTM=0.431 tol=2.02
2024-07-27 21:27:35,035 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=80.3 pTM=0.616 ipTM=0.365 tol=1.27
2024-07-27 21:27:56,482 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=80.6 pTM=0.635 ipTM=0.414 tol=0.78
2024-07-27 21:28:17,917 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=80.2 pTM=0.619 ipTM=0.385 tol=0.953
2024-07-27 21:28:39,362 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=79.9 pTM=0.606 ipTM=0.34 tol=0.521
2024-07-27 21:29:00,804 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=80.2 pTM=0.621 ipTM=0.377 tol=0.551
2024-07-27 21:29:22,270 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=80.6 pTM=0.623 ipTM=0.389 tol=0.682
2024-07-27 21:29:43,716 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=80.1 pTM=0.606 ipTM=0.344 tol=1.09
2024-07-27 21:30:05,182 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=80.8 pTM=0.632 ipTM=0.417 tol=0.903
2024-07-27 21:30:26,639 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=80.4 pTM=0.633 ipTM=0.414 tol=0.477
2024-07-27 21:30:26,640 alphafold2_multimer_v3_model_4_seed_000 took 279.0s (12 recycles)
2024-07-27 21:30:48,742 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=79.7 pTM=0.567 ipTM=0.242
2024-07-27 21:31:10,202 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=79.6 pTM=0.564 ipTM=0.262 tol=2.36
2024-07-27 21:31:31,656 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=79.6 pTM=0.556 ipTM=0.246 tol=1.21
2024-07-27 21:31:53,118 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.8 pTM=0.55 ipTM=0.25 tol=1.61
2024-07-27 21:32:14,574 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=80.2 pTM=0.55 ipTM=0.239 tol=0.526
2024-07-27 21:32:36,016 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=81.7 pTM=0.551 ipTM=0.246 tol=1.41
2024-07-27 21:32:57,461 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=81.9 pTM=0.547 ipTM=0.241 tol=1.38
2024-07-27 21:33:18,898 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=81.6 pTM=0.543 ipTM=0.233 tol=0.456
2024-07-27 21:33:18,899 alphafold2_multimer_v3_model_5_seed_000 took 171.6s (7 recycles)
2024-07-27 21:33:19,540 reranking models by 'multimer' metric
2024-07-27 21:33:23,093 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 21:34:01,282 Relaxation took 41.7s
2024-07-27 21:34:01,282 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=80.4 pTM=0.648 ipTM=0.447
2024-07-27 21:35:04,156 Relaxation took 62.9s
2024-07-27 21:35:04,156 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=80.4 pTM=0.633 ipTM=0.414
2024-07-27 21:36:08,615 Relaxation took 64.5s
2024-07-27 21:36:08,615 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=81.1 pTM=0.551 ipTM=0.248
2024-07-27 21:36:52,210 Relaxation took 43.6s
2024-07-27 21:36:52,210 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=80.4 pTM=0.551 ipTM=0.246
2024-07-27 21:37:29,991 Relaxation took 37.8s
2024-07-27 21:37:29,991 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=81.6 pTM=0.543 ipTM=0.233
2024-07-27 21:37:31,914 Done