2024-07-27 21:22:47,109 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 21:22:47,454 Running on GPU
2024-07-27 21:22:51,407 Found 6 citations for tools or databases
2024-07-27 21:22:51,408 Query 1/1: TMEM161A_FBXL20 (length 915)
2024-07-27 21:22:51,935 Sleeping for 6s. Reason: PENDING
2024-07-27 21:22:58,369 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:23:03,801 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:23:09,231 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:23:14,646 Sleeping for 10s. Reason: RUNNING
2024-07-27 21:23:25,076 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:23:34,519 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:23:43,503 Sleeping for 6s. Reason: PENDING
2024-07-27 21:23:50,311 Sleeping for 7s. Reason: RUNNING
2024-07-27 21:23:57,740 Sleeping for 6s. Reason: RUNNING
2024-07-27 21:24:04,176 Sleeping for 5s. Reason: RUNNING
2024-07-27 21:24:09,607 Sleeping for 8s. Reason: RUNNING
2024-07-27 21:24:18,028 Sleeping for 9s. Reason: RUNNING
2024-07-27 21:24:29,956 Setting max_seq=508, max_extra_seq=2048
2024-07-27 21:27:50,395 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=80.8 pTM=0.571 ipTM=0.258
2024-07-27 21:28:09,459 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.8 pTM=0.544 ipTM=0.221 tol=2.37
2024-07-27 21:28:28,575 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=79.9 pTM=0.552 ipTM=0.213 tol=2.97
2024-07-27 21:28:47,745 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=80 pTM=0.553 ipTM=0.21 tol=1.07
2024-07-27 21:29:06,961 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=80.2 pTM=0.541 ipTM=0.194 tol=1.24
2024-07-27 21:29:26,200 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=80.2 pTM=0.548 ipTM=0.206 tol=0.789
2024-07-27 21:29:45,495 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=80.2 pTM=0.535 ipTM=0.197 tol=1.31
2024-07-27 21:30:04,791 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=80.3 pTM=0.544 ipTM=0.199 tol=0.869
2024-07-27 21:30:24,097 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=80 pTM=0.539 ipTM=0.201 tol=0.612
2024-07-27 21:30:43,421 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=80.2 pTM=0.546 ipTM=0.198 tol=0.65
2024-07-27 21:31:02,747 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=79.9 pTM=0.544 ipTM=0.198 tol=0.729
2024-07-27 21:31:22,103 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=80.2 pTM=0.544 ipTM=0.197 tol=0.667
2024-07-27 21:31:41,439 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=80.2 pTM=0.549 ipTM=0.22 tol=0.705
2024-07-27 21:32:00,811 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=80.3 pTM=0.549 ipTM=0.207 tol=0.746
2024-07-27 21:32:20,176 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=80 pTM=0.542 ipTM=0.2 tol=0.497
2024-07-27 21:32:20,176 alphafold2_multimer_v3_model_1_seed_000 took 465.3s (14 recycles)
2024-07-27 21:32:40,095 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=80.8 pTM=0.556 ipTM=0.216
2024-07-27 21:32:59,495 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=80.5 pTM=0.562 ipTM=0.244 tol=2.24
2024-07-27 21:33:18,894 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=80.1 pTM=0.554 ipTM=0.221 tol=1.9
2024-07-27 21:33:38,282 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=80.6 pTM=0.552 ipTM=0.238 tol=0.886
2024-07-27 21:33:57,665 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.8 pTM=0.554 ipTM=0.219 tol=1.03
2024-07-27 21:34:17,027 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.7 pTM=0.549 ipTM=0.224 tol=0.836
2024-07-27 21:34:36,368 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.8 pTM=0.548 ipTM=0.214 tol=0.77
2024-07-27 21:34:55,746 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=80.8 pTM=0.548 ipTM=0.219 tol=0.518
2024-07-27 21:35:15,149 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=80.7 pTM=0.548 ipTM=0.219 tol=0.673
2024-07-27 21:35:34,553 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.9 pTM=0.546 ipTM=0.228 tol=0.822
2024-07-27 21:35:53,944 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.6 pTM=0.546 ipTM=0.222 tol=1.26
2024-07-27 21:36:13,337 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.8 pTM=0.544 ipTM=0.233 tol=1.92
2024-07-27 21:36:32,726 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.7 pTM=0.547 ipTM=0.242 tol=0.59
2024-07-27 21:36:52,112 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=80.8 pTM=0.547 ipTM=0.241 tol=2.22
2024-07-27 21:37:11,502 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.6 pTM=0.545 ipTM=0.237 tol=2.18
2024-07-27 21:37:30,874 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.5 pTM=0.546 ipTM=0.235 tol=1.28
2024-07-27 21:37:50,264 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.9 pTM=0.552 ipTM=0.232 tol=1.39
2024-07-27 21:38:09,642 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.9 pTM=0.551 ipTM=0.239 tol=0.616
2024-07-27 21:38:29,034 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.8 pTM=0.551 ipTM=0.214 tol=0.68
2024-07-27 21:38:48,404 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.5 pTM=0.55 ipTM=0.228 tol=0.902
2024-07-27 21:39:07,763 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.6 pTM=0.549 ipTM=0.228 tol=1.76
2024-07-27 21:39:27,142 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=80.9 pTM=0.55 ipTM=0.235 tol=0.908
2024-07-27 21:39:46,534 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.9 pTM=0.55 ipTM=0.237 tol=0.814
2024-07-27 21:40:05,904 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.8 pTM=0.547 ipTM=0.229 tol=2.7
2024-07-27 21:40:25,275 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.8 pTM=0.546 ipTM=0.232 tol=0.475
2024-07-27 21:40:25,276 alphafold2_multimer_v3_model_2_seed_000 took 484.6s (24 recycles)
2024-07-27 21:40:45,222 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=80.9 pTM=0.545 ipTM=0.192
2024-07-27 21:41:04,617 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=80.6 pTM=0.557 ipTM=0.233 tol=4.26
2024-07-27 21:41:23,980 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=79.9 pTM=0.544 ipTM=0.204 tol=3.06
2024-07-27 21:41:43,347 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=80.8 pTM=0.551 ipTM=0.225 tol=4.88
2024-07-27 21:42:02,726 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80.7 pTM=0.552 ipTM=0.224 tol=1.38
2024-07-27 21:42:22,087 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=80.7 pTM=0.553 ipTM=0.229 tol=0.857
2024-07-27 21:42:41,439 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.4 pTM=0.552 ipTM=0.225 tol=0.798
2024-07-27 21:43:00,772 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=80.4 pTM=0.551 ipTM=0.223 tol=0.629
2024-07-27 21:43:20,097 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=79.8 pTM=0.55 ipTM=0.233 tol=1.59
2024-07-27 21:43:39,399 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=80.2 pTM=0.556 ipTM=0.242 tol=1.62
2024-07-27 21:43:58,696 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=79.8 pTM=0.554 ipTM=0.234 tol=0.82
2024-07-27 21:44:18,024 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=80 pTM=0.554 ipTM=0.235 tol=0.671
2024-07-27 21:44:37,345 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=80.3 pTM=0.56 ipTM=0.25 tol=0.53
2024-07-27 21:44:56,659 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=80.2 pTM=0.552 ipTM=0.228 tol=0.611
2024-07-27 21:45:15,979 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=79.9 pTM=0.542 ipTM=0.211 tol=2.51
2024-07-27 21:45:35,327 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=80.9 pTM=0.543 ipTM=0.209 tol=1.73
2024-07-27 21:45:54,675 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=80.9 pTM=0.541 ipTM=0.221 tol=1.07
2024-07-27 21:46:14,033 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=80.8 pTM=0.542 ipTM=0.215 tol=1.9
2024-07-27 21:46:33,379 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=80.9 pTM=0.54 ipTM=0.216 tol=1.83
2024-07-27 21:46:52,678 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=80.8 pTM=0.544 ipTM=0.227 tol=2.6
2024-07-27 21:47:12,001 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=81.4 pTM=0.546 ipTM=0.215 tol=0.993
2024-07-27 21:47:31,345 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=81.4 pTM=0.543 ipTM=0.225 tol=0.813
2024-07-27 21:47:50,679 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=81.5 pTM=0.542 ipTM=0.204 tol=0.812
2024-07-27 21:48:10,010 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=81.4 pTM=0.539 ipTM=0.208 tol=1.27
2024-07-27 21:48:29,326 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=81.8 pTM=0.549 ipTM=0.219 tol=0.659
2024-07-27 21:48:48,616 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=81.3 pTM=0.542 ipTM=0.203 tol=0.681
2024-07-27 21:49:07,940 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=81.5 pTM=0.545 ipTM=0.212 tol=0.742
2024-07-27 21:49:27,291 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=81.8 pTM=0.544 ipTM=0.208 tol=0.907
2024-07-27 21:49:46,634 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=81.8 pTM=0.544 ipTM=0.205 tol=0.422
2024-07-27 21:49:46,635 alphafold2_multimer_v3_model_3_seed_000 took 560.8s (28 recycles)
2024-07-27 21:50:06,522 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.7 pTM=0.691 ipTM=0.576
2024-07-27 21:50:25,908 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.8 pTM=0.555 ipTM=0.251 tol=8.38
2024-07-27 21:50:45,282 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=78 pTM=0.572 ipTM=0.265 tol=6.78
2024-07-27 21:51:04,653 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=79.5 pTM=0.612 ipTM=0.372 tol=2.47
2024-07-27 21:51:24,044 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=79.6 pTM=0.609 ipTM=0.371 tol=0.801
2024-07-27 21:51:43,431 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=79.3 pTM=0.596 ipTM=0.328 tol=1.62
2024-07-27 21:52:02,782 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=79.5 pTM=0.604 ipTM=0.356 tol=1.42
2024-07-27 21:52:22,160 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=79.3 pTM=0.595 ipTM=0.335 tol=1.34
2024-07-27 21:52:41,577 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=79.2 pTM=0.601 ipTM=0.338 tol=0.892
2024-07-27 21:53:00,993 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.6 pTM=0.619 ipTM=0.388 tol=1.04
2024-07-27 21:53:20,398 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.6 pTM=0.614 ipTM=0.388 tol=1.24
2024-07-27 21:53:39,840 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.6 pTM=0.6 ipTM=0.346 tol=1.12
2024-07-27 21:53:59,266 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=79.3 pTM=0.594 ipTM=0.321 tol=0.702
2024-07-27 21:54:18,682 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=79.4 pTM=0.602 ipTM=0.343 tol=0.53
2024-07-27 21:54:38,072 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=79.6 pTM=0.613 ipTM=0.378 tol=0.672
2024-07-27 21:54:57,473 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=79.5 pTM=0.611 ipTM=0.379 tol=0.504
2024-07-27 21:55:16,839 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=79.4 pTM=0.611 ipTM=0.375 tol=0.564
2024-07-27 21:55:36,208 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=79.9 pTM=0.617 ipTM=0.394 tol=1.59
2024-07-27 21:55:55,618 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=80 pTM=0.616 ipTM=0.384 tol=0.856
2024-07-27 21:56:14,989 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=79.9 pTM=0.627 ipTM=0.417 tol=0.685
2024-07-27 21:56:34,353 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=79.9 pTM=0.612 ipTM=0.389 tol=1.23
2024-07-27 21:56:53,736 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=79.7 pTM=0.6 ipTM=0.335 tol=1.3
2024-07-27 21:57:13,148 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=79.7 pTM=0.603 ipTM=0.35 tol=0.571
2024-07-27 21:57:32,546 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=79.4 pTM=0.599 ipTM=0.351 tol=0.86
2024-07-27 21:57:51,928 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=80.2 pTM=0.637 ipTM=0.447 tol=1.26
2024-07-27 21:58:11,301 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=80.1 pTM=0.632 ipTM=0.448 tol=1.45
2024-07-27 21:58:30,693 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=80.2 pTM=0.63 ipTM=0.43 tol=1.04
2024-07-27 21:58:50,098 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=79.9 pTM=0.625 ipTM=0.424 tol=0.773
2024-07-27 21:59:09,482 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=79.6 pTM=0.617 ipTM=0.395 tol=0.78
2024-07-27 21:59:28,867 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=79.8 pTM=0.618 ipTM=0.392 tol=1.12
2024-07-27 21:59:48,238 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=79.5 pTM=0.615 ipTM=0.383 tol=0.711
2024-07-27 21:59:48,239 alphafold2_multimer_v3_model_4_seed_000 took 601.1s (30 recycles)
2024-07-27 22:00:08,123 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=79.4 pTM=0.57 ipTM=0.25
2024-07-27 22:00:27,517 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=78.6 pTM=0.544 ipTM=0.203 tol=4.58
2024-07-27 22:00:46,890 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=78.5 pTM=0.543 ipTM=0.226 tol=4.3
2024-07-27 22:01:06,292 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=79.4 pTM=0.541 ipTM=0.212 tol=2.11
2024-07-27 22:01:25,695 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=79.3 pTM=0.541 ipTM=0.211 tol=1.06
2024-07-27 22:01:45,106 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=79.4 pTM=0.542 ipTM=0.228 tol=1.61
2024-07-27 22:02:04,528 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=79.4 pTM=0.539 ipTM=0.204 tol=0.687
2024-07-27 22:02:23,944 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=79.2 pTM=0.538 ipTM=0.222 tol=0.287
2024-07-27 22:02:23,945 alphafold2_multimer_v3_model_5_seed_000 took 155.2s (7 recycles)
2024-07-27 22:02:24,460 reranking models by 'multimer' metric
2024-07-27 22:02:27,762 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 22:03:04,946 Relaxation took 40.5s
2024-07-27 22:03:04,947 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=79.5 pTM=0.615 ipTM=0.383
2024-07-27 22:03:37,517 Relaxation took 32.6s
2024-07-27 22:03:37,517 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=80.8 pTM=0.546 ipTM=0.232
2024-07-27 22:04:18,763 Relaxation took 41.2s
2024-07-27 22:04:18,763 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.2 pTM=0.538 ipTM=0.222
2024-07-27 22:04:49,520 Relaxation took 30.8s
2024-07-27 22:04:49,520 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=81.8 pTM=0.544 ipTM=0.205
2024-07-27 22:05:19,271 Relaxation took 29.7s
2024-07-27 22:05:19,271 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=80 pTM=0.542 ipTM=0.2
2024-07-27 22:05:20,986 Done