2024-07-27 21:38:06,853 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-27 21:38:07,231 Running on GPU 2024-07-27 21:38:11,019 Found 6 citations for tools or databases 2024-07-27 21:38:11,019 Query 1/1: TP53_CRBN (length 835) 2024-07-27 21:38:11,467 Sleeping for 7s. Reason: PENDING 2024-07-27 21:38:18,893 Sleeping for 10s. Reason: RUNNING 2024-07-27 21:38:29,339 Sleeping for 8s. Reason: RUNNING 2024-07-27 21:38:37,806 Sleeping for 9s. Reason: RUNNING 2024-07-27 21:38:47,244 Sleeping for 10s. Reason: RUNNING 2024-07-27 21:38:57,675 Sleeping for 5s. Reason: RUNNING 2024-07-27 21:39:04,143 Sleeping for 8s. Reason: RUNNING 2024-07-27 21:39:12,583 Sleeping for 6s. Reason: RUNNING 2024-07-27 21:39:20,798 Sleeping for 6s. Reason: PENDING 2024-07-27 21:39:27,215 Sleeping for 8s. Reason: RUNNING 2024-07-27 21:39:35,671 Sleeping for 8s. Reason: RUNNING 2024-07-27 21:39:44,098 Sleeping for 8s. Reason: RUNNING 2024-07-27 21:39:52,543 Sleeping for 9s. Reason: RUNNING 2024-07-27 21:40:04,335 Setting max_seq=508, max_extra_seq=2048 2024-07-27 21:44:03,568 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=63.9 pTM=0.499 ipTM=0.201 2024-07-27 21:44:21,463 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.5 pTM=0.482 ipTM=0.179 tol=7.62 2024-07-27 21:44:39,373 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.8 pTM=0.499 ipTM=0.256 tol=5.25 2024-07-27 21:44:57,316 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.485 ipTM=0.215 tol=1.92 2024-07-27 21:45:15,256 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.4 pTM=0.479 ipTM=0.19 tol=2.76 2024-07-27 21:45:33,233 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.4 pTM=0.472 ipTM=0.174 tol=3.7 2024-07-27 21:45:51,184 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.2 pTM=0.474 ipTM=0.187 tol=1.27 2024-07-27 21:46:09,156 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.3 pTM=0.472 ipTM=0.173 tol=1.71 2024-07-27 21:46:27,152 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.1 pTM=0.476 ipTM=0.182 tol=1.37 2024-07-27 21:46:45,157 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.4 pTM=0.474 ipTM=0.175 tol=1.94 2024-07-27 21:47:03,153 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.3 pTM=0.476 ipTM=0.185 tol=1.18 2024-07-27 21:47:21,147 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.4 pTM=0.475 ipTM=0.179 tol=1.23 2024-07-27 21:47:39,176 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.2 pTM=0.478 ipTM=0.184 tol=1.93 2024-07-27 21:47:57,176 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.2 pTM=0.473 ipTM=0.177 tol=2.05 2024-07-27 21:48:15,183 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.2 pTM=0.478 ipTM=0.191 tol=2.67 2024-07-27 21:48:33,215 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.6 pTM=0.474 ipTM=0.175 tol=2.13 2024-07-27 21:48:51,247 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.3 pTM=0.479 ipTM=0.191 tol=1.58 2024-07-27 21:49:09,270 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.4 pTM=0.474 ipTM=0.178 tol=1.33 2024-07-27 21:49:27,274 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.1 pTM=0.476 ipTM=0.187 tol=1.37 2024-07-27 21:49:45,307 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.2 pTM=0.474 ipTM=0.182 tol=1.54 2024-07-27 21:50:03,319 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.1 pTM=0.477 ipTM=0.183 tol=1.92 2024-07-27 21:50:21,337 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.3 pTM=0.476 ipTM=0.182 tol=1.49 2024-07-27 21:50:39,340 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.2 pTM=0.477 ipTM=0.19 tol=1.99 2024-07-27 21:50:57,346 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.4 pTM=0.476 ipTM=0.185 tol=2.23 2024-07-27 21:51:15,362 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64 pTM=0.479 ipTM=0.193 tol=1.35 2024-07-27 21:51:33,378 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.4 pTM=0.473 ipTM=0.18 tol=2.26 2024-07-27 21:51:51,417 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.2 pTM=0.48 ipTM=0.193 tol=1.7 2024-07-27 21:52:09,436 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.2 pTM=0.474 ipTM=0.184 tol=4.29 2024-07-27 21:52:27,448 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.1 pTM=0.48 ipTM=0.194 tol=4.18 2024-07-27 21:52:45,469 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.4 pTM=0.475 ipTM=0.183 tol=1.59 2024-07-27 21:53:03,470 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.1 pTM=0.48 ipTM=0.191 tol=1.72 2024-07-27 21:53:03,471 alphafold2_multimer_v3_model_1_seed_000 took 772.4s (30 recycles) 2024-07-27 21:53:22,071 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.5 pTM=0.507 ipTM=0.227 2024-07-27 21:53:40,122 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.4 pTM=0.543 ipTM=0.347 tol=6.35 2024-07-27 21:53:58,181 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66.2 pTM=0.512 ipTM=0.258 tol=3.54 2024-07-27 21:54:16,247 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.4 pTM=0.483 ipTM=0.188 tol=2.11 2024-07-27 21:54:34,305 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.3 pTM=0.474 ipTM=0.17 tol=2.1 2024-07-27 21:54:52,379 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.2 pTM=0.471 ipTM=0.17 tol=1.97 2024-07-27 21:55:10,443 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.3 pTM=0.472 ipTM=0.167 tol=2.56 2024-07-27 21:55:28,499 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.1 pTM=0.471 ipTM=0.17 tol=2.17 2024-07-27 21:55:46,562 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65 pTM=0.468 ipTM=0.163 tol=1.52 2024-07-27 21:56:04,614 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.1 pTM=0.469 ipTM=0.172 tol=1.38 2024-07-27 21:56:22,661 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.2 pTM=0.469 ipTM=0.168 tol=2.44 2024-07-27 21:56:40,720 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.2 pTM=0.471 ipTM=0.17 tol=2.15 2024-07-27 21:56:58,773 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.9 pTM=0.467 ipTM=0.172 tol=1.4 2024-07-27 21:57:16,833 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.7 pTM=0.466 ipTM=0.174 tol=2.11 2024-07-27 21:57:34,891 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65 pTM=0.467 ipTM=0.174 tol=1.28 2024-07-27 21:57:52,976 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.1 pTM=0.463 ipTM=0.171 tol=15.6 2024-07-27 21:58:11,074 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.6 pTM=0.465 ipTM=0.164 tol=9.19 2024-07-27 21:58:29,156 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.7 pTM=0.465 ipTM=0.171 tol=9.94 2024-07-27 21:58:47,219 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.8 pTM=0.465 ipTM=0.171 tol=5.64 2024-07-27 21:59:05,310 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.4 pTM=0.467 ipTM=0.171 tol=5.51 2024-07-27 21:59:23,375 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.8 pTM=0.469 ipTM=0.166 tol=3.85 2024-07-27 21:59:41,472 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.8 pTM=0.463 ipTM=0.17 tol=3.02 2024-07-27 21:59:59,554 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.8 pTM=0.468 ipTM=0.17 tol=2.61 2024-07-27 22:00:17,628 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.9 pTM=0.465 ipTM=0.169 tol=3.11 2024-07-27 22:00:35,682 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.8 pTM=0.465 ipTM=0.172 tol=3.72 2024-07-27 22:00:53,767 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65 pTM=0.465 ipTM=0.168 tol=2.22 2024-07-27 22:01:11,851 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65 pTM=0.467 ipTM=0.173 tol=2.63 2024-07-27 22:01:29,931 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.9 pTM=0.466 ipTM=0.173 tol=2.71 2024-07-27 22:01:47,978 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65 pTM=0.466 ipTM=0.17 tol=1.69 2024-07-27 22:02:06,049 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.9 pTM=0.465 ipTM=0.169 tol=1.06 2024-07-27 22:02:24,118 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.9 pTM=0.467 ipTM=0.17 tol=1.93 2024-07-27 22:02:24,118 alphafold2_multimer_v3_model_2_seed_000 took 560.1s (30 recycles) 2024-07-27 22:02:42,724 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=63.8 pTM=0.475 ipTM=0.186 2024-07-27 22:03:00,794 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.5 pTM=0.466 ipTM=0.176 tol=12.2 2024-07-27 22:03:18,871 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.4 pTM=0.465 ipTM=0.183 tol=4.01 2024-07-27 22:03:36,963 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.4 pTM=0.468 ipTM=0.192 tol=2.32 2024-07-27 22:03:55,058 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.5 pTM=0.469 ipTM=0.2 tol=2.91 2024-07-27 22:04:13,158 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.4 pTM=0.466 ipTM=0.196 tol=1.37 2024-07-27 22:04:31,265 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.4 pTM=0.466 ipTM=0.193 tol=1.55 2024-07-27 22:04:49,370 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.5 pTM=0.467 ipTM=0.194 tol=1.26 2024-07-27 22:05:07,479 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.3 pTM=0.465 ipTM=0.191 tol=0.85 2024-07-27 22:05:25,603 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.3 pTM=0.466 ipTM=0.196 tol=1.33 2024-07-27 22:05:43,727 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.4 pTM=0.463 ipTM=0.199 tol=1.27 2024-07-27 22:06:01,867 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.3 pTM=0.465 ipTM=0.198 tol=1.9 2024-07-27 22:06:19,967 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.3 pTM=0.461 ipTM=0.196 tol=1.79 2024-07-27 22:06:38,085 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63 pTM=0.463 ipTM=0.201 tol=1.88 2024-07-27 22:06:56,215 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.2 pTM=0.462 ipTM=0.197 tol=1.77 2024-07-27 22:07:14,314 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.3 pTM=0.462 ipTM=0.197 tol=2.07 2024-07-27 22:07:32,424 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.3 pTM=0.464 ipTM=0.194 tol=1.38 2024-07-27 22:07:50,554 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.3 pTM=0.459 ipTM=0.194 tol=1.03 2024-07-27 22:08:08,667 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.9 pTM=0.461 ipTM=0.195 tol=1.77 2024-07-27 22:08:26,791 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.2 pTM=0.46 ipTM=0.193 tol=1.05 2024-07-27 22:08:44,914 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.1 pTM=0.462 ipTM=0.199 tol=1.1 2024-07-27 22:09:03,035 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.2 pTM=0.46 ipTM=0.197 tol=1.51 2024-07-27 22:09:21,171 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.1 pTM=0.46 ipTM=0.194 tol=1.48 2024-07-27 22:09:39,275 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.2 pTM=0.461 ipTM=0.192 tol=1.53 2024-07-27 22:09:57,409 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63 pTM=0.459 ipTM=0.185 tol=1.15 2024-07-27 22:10:15,522 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.1 pTM=0.461 ipTM=0.187 tol=1.06 2024-07-27 22:10:33,635 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.1 pTM=0.459 ipTM=0.198 tol=1.66 2024-07-27 22:10:51,743 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63 pTM=0.458 ipTM=0.187 tol=1.64 2024-07-27 22:11:09,848 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63 pTM=0.459 ipTM=0.193 tol=1.21 2024-07-27 22:11:27,950 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63 pTM=0.46 ipTM=0.193 tol=1.32 2024-07-27 22:11:46,081 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63 pTM=0.461 ipTM=0.192 tol=1.13 2024-07-27 22:11:46,082 alphafold2_multimer_v3_model_3_seed_000 took 561.4s (30 recycles) 2024-07-27 22:12:04,655 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.8 pTM=0.489 ipTM=0.218 2024-07-27 22:12:22,700 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=62.1 pTM=0.47 ipTM=0.215 tol=6.41 2024-07-27 22:12:40,776 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.2 pTM=0.46 ipTM=0.194 tol=3.04 2024-07-27 22:12:58,879 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.6 pTM=0.454 ipTM=0.195 tol=3.33 2024-07-27 22:13:16,947 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62 pTM=0.464 ipTM=0.194 tol=2.97 2024-07-27 22:13:35,003 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62 pTM=0.476 ipTM=0.23 tol=3.83 2024-07-27 22:13:53,035 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.2 pTM=0.483 ipTM=0.262 tol=2.85 2024-07-27 22:14:11,066 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.6 pTM=0.468 ipTM=0.217 tol=1.88 2024-07-27 22:14:29,104 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.2 pTM=0.463 ipTM=0.197 tol=1.34 2024-07-27 22:14:47,168 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.9 pTM=0.466 ipTM=0.194 tol=3.07 2024-07-27 22:15:05,201 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.1 pTM=0.468 ipTM=0.202 tol=2.41 2024-07-27 22:15:23,231 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62 pTM=0.462 ipTM=0.197 tol=2.48 2024-07-27 22:15:41,292 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.3 pTM=0.453 ipTM=0.194 tol=4.1 2024-07-27 22:15:59,338 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.7 pTM=0.459 ipTM=0.188 tol=1.75 2024-07-27 22:16:17,369 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.1 pTM=0.47 ipTM=0.22 tol=2.96 2024-07-27 22:16:35,444 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.4 pTM=0.453 ipTM=0.186 tol=9.59 2024-07-27 22:16:53,534 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.8 pTM=0.454 ipTM=0.19 tol=13.2 2024-07-27 22:17:11,615 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.9 pTM=0.457 ipTM=0.19 tol=4.43 2024-07-27 22:17:29,684 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.7 pTM=0.457 ipTM=0.196 tol=4.14 2024-07-27 22:17:47,751 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.9 pTM=0.457 ipTM=0.19 tol=2.15 2024-07-27 22:18:05,813 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.5 pTM=0.459 ipTM=0.201 tol=2.23 2024-07-27 22:18:23,875 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.9 pTM=0.456 ipTM=0.185 tol=4.7 2024-07-27 22:18:41,914 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.8 pTM=0.458 ipTM=0.195 tol=3.73 2024-07-27 22:18:59,961 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62 pTM=0.459 ipTM=0.184 tol=1.44 2024-07-27 22:19:17,999 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.8 pTM=0.458 ipTM=0.191 tol=3.2 2024-07-27 22:19:36,034 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61.9 pTM=0.458 ipTM=0.184 tol=4.39 2024-07-27 22:19:54,068 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.7 pTM=0.455 ipTM=0.189 tol=2.7 2024-07-27 22:20:12,120 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.5 pTM=0.455 ipTM=0.186 tol=1.68 2024-07-27 22:20:30,151 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.6 pTM=0.46 ipTM=0.188 tol=3.79 2024-07-27 22:20:48,184 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.6 pTM=0.459 ipTM=0.191 tol=3.1 2024-07-27 22:21:06,233 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.7 pTM=0.458 ipTM=0.197 tol=2.59 2024-07-27 22:21:06,234 alphafold2_multimer_v3_model_4_seed_000 took 559.6s (30 recycles) 2024-07-27 22:21:24,812 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.2 pTM=0.569 ipTM=0.437 2024-07-27 22:21:42,885 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=64.2 pTM=0.48 ipTM=0.206 tol=7.57 2024-07-27 22:22:01,001 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.6 pTM=0.46 ipTM=0.169 tol=6.86 2024-07-27 22:22:19,154 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.4 pTM=0.464 ipTM=0.165 tol=7.98 2024-07-27 22:22:37,301 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.7 pTM=0.467 ipTM=0.167 tol=5.6 2024-07-27 22:22:55,461 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.8 pTM=0.472 ipTM=0.168 tol=5.32 2024-07-27 22:23:13,616 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.7 pTM=0.47 ipTM=0.164 tol=3.85 2024-07-27 22:23:31,738 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.7 pTM=0.477 ipTM=0.169 tol=2.94 2024-07-27 22:23:49,882 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.6 pTM=0.472 ipTM=0.169 tol=3.38 2024-07-27 22:24:08,018 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.7 pTM=0.475 ipTM=0.168 tol=1.54 2024-07-27 22:24:26,167 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.7 pTM=0.472 ipTM=0.164 tol=1.7 2024-07-27 22:24:44,299 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.8 pTM=0.477 ipTM=0.168 tol=2.21 2024-07-27 22:25:02,442 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.7 pTM=0.471 ipTM=0.166 tol=2.14 2024-07-27 22:25:20,583 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.7 pTM=0.477 ipTM=0.169 tol=1.74 2024-07-27 22:25:38,733 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.8 pTM=0.474 ipTM=0.164 tol=2.48 2024-07-27 22:25:56,883 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.7 pTM=0.476 ipTM=0.169 tol=1.98 2024-07-27 22:26:15,022 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.7 pTM=0.475 ipTM=0.169 tol=1.99 2024-07-27 22:26:33,169 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.8 pTM=0.474 ipTM=0.166 tol=2.81 2024-07-27 22:26:51,327 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.6 pTM=0.475 ipTM=0.17 tol=1.74 2024-07-27 22:27:09,468 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.8 pTM=0.474 ipTM=0.167 tol=1.6 2024-07-27 22:27:27,605 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.8 pTM=0.477 ipTM=0.169 tol=2.51 2024-07-27 22:27:45,729 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.8 pTM=0.473 ipTM=0.166 tol=3.57 2024-07-27 22:28:03,868 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.8 pTM=0.477 ipTM=0.17 tol=6.17 2024-07-27 22:28:22,005 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.8 pTM=0.473 ipTM=0.164 tol=3.67 2024-07-27 22:28:40,114 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.7 pTM=0.479 ipTM=0.176 tol=1.55 2024-07-27 22:28:58,239 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.8 pTM=0.47 ipTM=0.161 tol=1.58 2024-07-27 22:29:16,371 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.7 pTM=0.474 ipTM=0.168 tol=2.62 2024-07-27 22:29:34,490 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.5 pTM=0.471 ipTM=0.17 tol=4.62 2024-07-27 22:29:52,616 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.7 pTM=0.476 ipTM=0.174 tol=3.1 2024-07-27 22:30:10,730 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.7 pTM=0.475 ipTM=0.174 tol=2.31 2024-07-27 22:30:28,849 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.7 pTM=0.478 ipTM=0.174 tol=1.39 2024-07-27 22:30:28,850 alphafold2_multimer_v3_model_5_seed_000 took 562.1s (30 recycles) 2024-07-27 22:30:29,407 reranking models by 'multimer' metric 2024-07-27 22:30:32,683 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-27 22:31:34,291 Relaxation took 64.9s 2024-07-27 22:31:34,291 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.7 pTM=0.458 ipTM=0.197 2024-07-27 22:32:05,827 Relaxation took 31.5s 2024-07-27 22:32:05,828 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.1 pTM=0.48 ipTM=0.191 2024-07-27 22:34:02,317 Relaxation took 116.5s 2024-07-27 22:34:02,317 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63 pTM=0.461 ipTM=0.192 2024-07-27 22:35:11,053 Relaxation took 68.7s 2024-07-27 22:35:11,053 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.7 pTM=0.478 ipTM=0.174 2024-07-27 22:35:43,733 Relaxation took 32.7s 2024-07-27 22:35:43,733 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.9 pTM=0.467 ipTM=0.17 2024-07-27 22:35:45,548 Done