2024-07-27 22:35:50,269 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 22:35:50,590 Running on GPU
2024-07-27 22:35:54,136 Found 6 citations for tools or databases
2024-07-27 22:35:54,136 Query 1/1: TP53_KLHL3 (length 980)
2024-07-27 22:35:54,605 Sleeping for 8s. Reason: PENDING
2024-07-27 22:36:03,051 Sleeping for 9s. Reason: RUNNING
2024-07-27 22:36:12,529 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:36:19,972 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:36:27,414 Sleeping for 6s. Reason: RUNNING
2024-07-27 22:36:33,860 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:36:41,281 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:36:49,487 Sleeping for 6s. Reason: RUNNING
2024-07-27 22:36:55,903 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:37:03,347 Sleeping for 5s. Reason: RUNNING
2024-07-27 22:37:08,933 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:37:17,356 Sleeping for 9s. Reason: RUNNING
2024-07-27 22:37:27,842 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:37:35,293 Sleeping for 10s. Reason: RUNNING
2024-07-27 22:37:45,718 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:37:54,159 Sleeping for 5s. Reason: RUNNING
2024-07-27 22:37:59,593 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:38:07,036 Sleeping for 6s. Reason: RUNNING
2024-07-27 22:38:13,479 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:38:20,902 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:38:32,762 Sleeping for 10s. Reason: PENDING
2024-07-27 22:38:43,175 Sleeping for 6s. Reason: RUNNING
2024-07-27 22:38:49,597 Sleeping for 6s. Reason: RUNNING
2024-07-27 22:38:56,066 Sleeping for 6s. Reason: RUNNING
2024-07-27 22:39:02,502 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:39:10,948 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:39:19,373 Sleeping for 10s. Reason: RUNNING
2024-07-27 22:39:29,799 Sleeping for 9s. Reason: RUNNING
2024-07-27 22:39:39,229 Sleeping for 10s. Reason: RUNNING
2024-07-27 22:39:49,642 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:40:01,434 Setting max_seq=508, max_extra_seq=2048
2024-07-27 22:42:50,946 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=74.8 pTM=0.402 ipTM=0.186
2024-07-27 22:43:11,521 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.3 pTM=0.398 ipTM=0.287 tol=7.7
2024-07-27 22:43:32,180 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.8 pTM=0.395 ipTM=0.224 tol=3.43
2024-07-27 22:43:52,879 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.9 pTM=0.395 ipTM=0.241 tol=6.07
2024-07-27 22:44:13,659 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.8 pTM=0.393 ipTM=0.229 tol=2.35
2024-07-27 22:44:34,469 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.9 pTM=0.395 ipTM=0.235 tol=3.78
2024-07-27 22:44:55,314 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.2 pTM=0.396 ipTM=0.23 tol=2.33
2024-07-27 22:45:16,160 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.2 pTM=0.397 ipTM=0.233 tol=1.9
2024-07-27 22:45:37,027 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.2 pTM=0.397 ipTM=0.221 tol=2.61
2024-07-27 22:45:57,896 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75 pTM=0.396 ipTM=0.224 tol=1.71
2024-07-27 22:46:18,840 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.1 pTM=0.395 ipTM=0.225 tol=0.882
2024-07-27 22:46:39,794 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.3 pTM=0.396 ipTM=0.226 tol=2.44
2024-07-27 22:47:00,741 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.1 pTM=0.395 ipTM=0.22 tol=2.92
2024-07-27 22:47:21,688 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.2 pTM=0.396 ipTM=0.234 tol=3.57
2024-07-27 22:47:42,642 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75 pTM=0.395 ipTM=0.222 tol=1.31
2024-07-27 22:48:03,595 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=75.2 pTM=0.395 ipTM=0.213 tol=1.23
2024-07-27 22:48:24,569 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.3 pTM=0.396 ipTM=0.234 tol=1.46
2024-07-27 22:48:45,543 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=75.1 pTM=0.395 ipTM=0.222 tol=2.24
2024-07-27 22:49:06,471 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.1 pTM=0.394 ipTM=0.222 tol=1.7
2024-07-27 22:49:27,387 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=75.1 pTM=0.395 ipTM=0.218 tol=1.81
2024-07-27 22:49:48,306 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=75.2 pTM=0.396 ipTM=0.227 tol=2.45
2024-07-27 22:50:09,210 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.2 pTM=0.397 ipTM=0.232 tol=3.21
2024-07-27 22:50:30,115 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75 pTM=0.396 ipTM=0.23 tol=1.75
2024-07-27 22:50:51,020 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=75.3 pTM=0.398 ipTM=0.218 tol=2.18
2024-07-27 22:51:11,924 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.1 pTM=0.397 ipTM=0.22 tol=2.04
2024-07-27 22:51:32,850 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.1 pTM=0.399 ipTM=0.222 tol=1.89
2024-07-27 22:51:53,803 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.2 pTM=0.398 ipTM=0.227 tol=3.34
2024-07-27 22:52:14,711 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.2 pTM=0.398 ipTM=0.222 tol=1.95
2024-07-27 22:52:35,617 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=75.1 pTM=0.397 ipTM=0.223 tol=1.26
2024-07-27 22:52:56,512 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.1 pTM=0.397 ipTM=0.229 tol=1.54
2024-07-27 22:53:17,425 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.9 pTM=0.396 ipTM=0.225 tol=1.4
2024-07-27 22:53:17,426 alphafold2_multimer_v3_model_1_seed_000 took 791.1s (30 recycles)
2024-07-27 22:53:39,014 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.1 pTM=0.411 ipTM=0.165
2024-07-27 22:54:00,035 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.1 pTM=0.405 ipTM=0.167 tol=6.66
2024-07-27 22:54:21,031 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.1 pTM=0.403 ipTM=0.166 tol=6.42
2024-07-27 22:54:42,022 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.3 pTM=0.398 ipTM=0.16 tol=3.8
2024-07-27 22:55:03,004 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.6 pTM=0.4 ipTM=0.181 tol=8.41
2024-07-27 22:55:23,987 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.9 pTM=0.402 ipTM=0.298 tol=3.35
2024-07-27 22:55:44,957 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77 pTM=0.402 ipTM=0.316 tol=2.03
2024-07-27 22:56:05,929 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77.1 pTM=0.401 ipTM=0.316 tol=2.33
2024-07-27 22:56:26,925 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77.1 pTM=0.4 ipTM=0.31 tol=1.33
2024-07-27 22:56:47,919 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=76.9 pTM=0.399 ipTM=0.284 tol=2
2024-07-27 22:57:08,921 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.9 pTM=0.399 ipTM=0.263 tol=1.23
2024-07-27 22:57:29,907 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77 pTM=0.399 ipTM=0.267 tol=1.83
2024-07-27 22:57:50,893 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=76.9 pTM=0.399 ipTM=0.275 tol=2.41
2024-07-27 22:58:11,951 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.9 pTM=0.4 ipTM=0.286 tol=2.29
2024-07-27 22:58:33,006 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=76.8 pTM=0.399 ipTM=0.269 tol=2.12
2024-07-27 22:58:54,066 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.9 pTM=0.401 ipTM=0.262 tol=2.3
2024-07-27 22:59:15,124 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=76.9 pTM=0.4 ipTM=0.26 tol=1.35
2024-07-27 22:59:36,140 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=76.9 pTM=0.399 ipTM=0.265 tol=3.43
2024-07-27 22:59:57,124 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.8 pTM=0.398 ipTM=0.252 tol=4.66
2024-07-27 23:00:18,108 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=76.8 pTM=0.401 ipTM=0.255 tol=3.24
2024-07-27 23:00:39,095 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.9 pTM=0.401 ipTM=0.254 tol=2.75
2024-07-27 23:01:00,075 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.9 pTM=0.401 ipTM=0.259 tol=2.09
2024-07-27 23:01:21,063 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76.8 pTM=0.401 ipTM=0.254 tol=2.11
2024-07-27 23:01:42,058 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=77 pTM=0.401 ipTM=0.242 tol=1.24
2024-07-27 23:02:03,044 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76.8 pTM=0.4 ipTM=0.253 tol=1.24
2024-07-27 23:02:24,014 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76.9 pTM=0.4 ipTM=0.267 tol=1.1
2024-07-27 23:02:45,011 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=76.9 pTM=0.401 ipTM=0.276 tol=1.25
2024-07-27 23:03:06,042 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.9 pTM=0.401 ipTM=0.27 tol=1.81
2024-07-27 23:03:27,055 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=76.8 pTM=0.401 ipTM=0.264 tol=2.02
2024-07-27 23:03:48,069 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.8 pTM=0.401 ipTM=0.262 tol=1.25
2024-07-27 23:04:09,076 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=76.7 pTM=0.4 ipTM=0.247 tol=1.42
2024-07-27 23:04:09,077 alphafold2_multimer_v3_model_2_seed_000 took 651.0s (30 recycles)
2024-07-27 23:04:30,713 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=75.9 pTM=0.439 ipTM=0.22
2024-07-27 23:04:51,820 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.7 pTM=0.415 ipTM=0.176 tol=7.71
2024-07-27 23:05:12,935 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.6 pTM=0.431 ipTM=0.214 tol=4.51
2024-07-27 23:05:34,065 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=76.5 pTM=0.423 ipTM=0.201 tol=2.12
2024-07-27 23:05:55,181 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.5 pTM=0.428 ipTM=0.205 tol=1.6
2024-07-27 23:06:16,299 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.3 pTM=0.423 ipTM=0.202 tol=1.25
2024-07-27 23:06:37,422 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.4 pTM=0.424 ipTM=0.204 tol=1.56
2024-07-27 23:06:58,550 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.3 pTM=0.423 ipTM=0.203 tol=1.39
2024-07-27 23:07:19,673 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=76.4 pTM=0.422 ipTM=0.199 tol=2.27
2024-07-27 23:07:40,810 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.2 pTM=0.419 ipTM=0.196 tol=2.46
2024-07-27 23:08:01,963 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.2 pTM=0.417 ipTM=0.188 tol=2.76
2024-07-27 23:08:23,116 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.1 pTM=0.419 ipTM=0.195 tol=1.1
2024-07-27 23:08:44,267 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76.2 pTM=0.419 ipTM=0.194 tol=1.18
2024-07-27 23:09:05,432 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.1 pTM=0.42 ipTM=0.198 tol=2.07
2024-07-27 23:09:26,594 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=76 pTM=0.416 ipTM=0.186 tol=3.68
2024-07-27 23:09:47,743 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76.1 pTM=0.418 ipTM=0.191 tol=1.71
2024-07-27 23:10:08,895 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76.1 pTM=0.415 ipTM=0.181 tol=1.55
2024-07-27 23:10:30,022 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.1 pTM=0.418 ipTM=0.194 tol=1.42
2024-07-27 23:10:51,134 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76 pTM=0.414 ipTM=0.182 tol=1.2
2024-07-27 23:11:12,243 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.1 pTM=0.417 ipTM=0.191 tol=1.56
2024-07-27 23:11:33,348 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.9 pTM=0.414 ipTM=0.178 tol=2.34
2024-07-27 23:11:54,450 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=75.9 pTM=0.414 ipTM=0.182 tol=2.12
2024-07-27 23:12:15,562 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.1 pTM=0.42 ipTM=0.193 tol=1.17
2024-07-27 23:12:36,681 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.1 pTM=0.418 ipTM=0.188 tol=1.02
2024-07-27 23:12:57,786 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76.2 pTM=0.425 ipTM=0.204 tol=1.59
2024-07-27 23:13:18,883 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.1 pTM=0.422 ipTM=0.196 tol=2.93
2024-07-27 23:13:40,008 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.3 pTM=0.424 ipTM=0.198 tol=1.92
2024-07-27 23:14:01,135 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.1 pTM=0.42 ipTM=0.188 tol=2.28
2024-07-27 23:14:22,255 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=75.9 pTM=0.421 ipTM=0.198 tol=2.36
2024-07-27 23:14:43,393 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=75.9 pTM=0.417 ipTM=0.188 tol=1.7
2024-07-27 23:15:04,528 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=75.9 pTM=0.418 ipTM=0.189 tol=2.37
2024-07-27 23:15:04,529 alphafold2_multimer_v3_model_3_seed_000 took 654.9s (30 recycles)
2024-07-27 23:15:26,207 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=74.5 pTM=0.408 ipTM=0.184
2024-07-27 23:15:47,302 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=75.1 pTM=0.401 ipTM=0.154 tol=7.15
2024-07-27 23:16:08,375 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74.8 pTM=0.402 ipTM=0.159 tol=4.19
2024-07-27 23:16:29,472 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.3 pTM=0.399 ipTM=0.146 tol=2.86
2024-07-27 23:16:50,550 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=74.8 pTM=0.397 ipTM=0.148 tol=2.78
2024-07-27 23:17:11,647 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74.9 pTM=0.396 ipTM=0.147 tol=2.05
2024-07-27 23:17:32,743 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.9 pTM=0.397 ipTM=0.148 tol=1.88
2024-07-27 23:17:53,831 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=75.1 pTM=0.399 ipTM=0.149 tol=3.16
2024-07-27 23:18:14,926 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75.1 pTM=0.397 ipTM=0.148 tol=3.15
2024-07-27 23:18:36,020 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.1 pTM=0.404 ipTM=0.152 tol=4.06
2024-07-27 23:18:57,115 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.9 pTM=0.401 ipTM=0.146 tol=3.06
2024-07-27 23:19:18,221 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=75.1 pTM=0.407 ipTM=0.149 tol=2.65
2024-07-27 23:19:39,323 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75.1 pTM=0.4 ipTM=0.146 tol=3.36
2024-07-27 23:20:00,424 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.9 pTM=0.408 ipTM=0.146 tol=3.36
2024-07-27 23:20:21,531 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=75 pTM=0.399 ipTM=0.144 tol=3.05
2024-07-27 23:20:42,637 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.8 pTM=0.405 ipTM=0.141 tol=2.29
2024-07-27 23:21:03,732 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=73.2 pTM=0.396 ipTM=0.144 tol=7.61
2024-07-27 23:21:24,839 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=74.8 pTM=0.404 ipTM=0.14 tol=7.8
2024-07-27 23:21:45,942 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=74.6 pTM=0.397 ipTM=0.142 tol=5.02
2024-07-27 23:22:07,038 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=74.8 pTM=0.4 ipTM=0.14 tol=3.66
2024-07-27 23:22:28,137 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=74.8 pTM=0.399 ipTM=0.142 tol=3.17
2024-07-27 23:22:49,239 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=74.9 pTM=0.407 ipTM=0.147 tol=5.11
2024-07-27 23:23:10,344 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=74.9 pTM=0.401 ipTM=0.147 tol=2.88
2024-07-27 23:23:31,460 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.1 pTM=0.404 ipTM=0.146 tol=2.63
2024-07-27 23:23:52,563 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.1 pTM=0.398 ipTM=0.147 tol=3.13
2024-07-27 23:24:13,672 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=74.9 pTM=0.407 ipTM=0.147 tol=2.62
2024-07-27 23:24:34,793 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.1 pTM=0.402 ipTM=0.146 tol=2.04
2024-07-27 23:24:55,900 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=75.1 pTM=0.41 ipTM=0.147 tol=2.54
2024-07-27 23:25:17,008 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=74.9 pTM=0.403 ipTM=0.149 tol=2.21
2024-07-27 23:25:38,101 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.8 pTM=0.408 ipTM=0.148 tol=1.84
2024-07-27 23:25:59,172 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=74.8 pTM=0.401 ipTM=0.145 tol=2.45
2024-07-27 23:25:59,173 alphafold2_multimer_v3_model_4_seed_000 took 654.0s (30 recycles)
2024-07-27 23:26:20,828 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=74.8 pTM=0.416 ipTM=0.163
2024-07-27 23:26:41,952 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.7 pTM=0.41 ipTM=0.172 tol=7.14
2024-07-27 23:27:03,084 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.4 pTM=0.406 ipTM=0.164 tol=5.13
2024-07-27 23:27:24,206 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.4 pTM=0.401 ipTM=0.157 tol=4.37
2024-07-27 23:27:45,347 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.5 pTM=0.405 ipTM=0.161 tol=2.95
2024-07-27 23:28:06,492 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.3 pTM=0.399 ipTM=0.156 tol=2.97
2024-07-27 23:28:27,642 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.4 pTM=0.402 ipTM=0.16 tol=5.02
2024-07-27 23:28:48,778 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.4 pTM=0.402 ipTM=0.156 tol=4.79
2024-07-27 23:29:09,888 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.4 pTM=0.403 ipTM=0.158 tol=4.9
2024-07-27 23:29:30,984 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=75.2 pTM=0.4 ipTM=0.156 tol=1.98
2024-07-27 23:29:52,126 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.4 pTM=0.403 ipTM=0.154 tol=2.35
2024-07-27 23:30:13,278 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=75.4 pTM=0.401 ipTM=0.157 tol=1.48
2024-07-27 23:30:34,427 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.4 pTM=0.402 ipTM=0.155 tol=2.81
2024-07-27 23:30:55,581 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=75.3 pTM=0.4 ipTM=0.156 tol=2.2
2024-07-27 23:31:16,742 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=75.2 pTM=0.4 ipTM=0.156 tol=2.87
2024-07-27 23:31:37,900 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=75.2 pTM=0.399 ipTM=0.156 tol=3.75
2024-07-27 23:31:59,064 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75.2 pTM=0.4 ipTM=0.154 tol=3.1
2024-07-27 23:32:20,196 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.3 pTM=0.4 ipTM=0.157 tol=4.83
2024-07-27 23:32:41,315 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.2 pTM=0.401 ipTM=0.156 tol=2.9
2024-07-27 23:33:02,418 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.3 pTM=0.402 ipTM=0.158 tol=2.53
2024-07-27 23:33:23,543 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.4 pTM=0.403 ipTM=0.155 tol=2.09
2024-07-27 23:33:44,669 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.4 pTM=0.402 ipTM=0.158 tol=2.21
2024-07-27 23:34:05,759 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=75.4 pTM=0.404 ipTM=0.159 tol=1.92
2024-07-27 23:34:26,834 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.4 pTM=0.404 ipTM=0.161 tol=2.19
2024-07-27 23:34:47,922 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.4 pTM=0.402 ipTM=0.156 tol=2.08
2024-07-27 23:35:09,045 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75.3 pTM=0.401 ipTM=0.157 tol=2.21
2024-07-27 23:35:30,212 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.5 pTM=0.404 ipTM=0.156 tol=2.07
2024-07-27 23:35:51,355 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.5 pTM=0.402 ipTM=0.156 tol=2.57
2024-07-27 23:36:12,486 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=75.4 pTM=0.403 ipTM=0.156 tol=1.89
2024-07-27 23:36:33,646 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75.4 pTM=0.401 ipTM=0.156 tol=2.73
2024-07-27 23:36:54,795 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=75.3 pTM=0.402 ipTM=0.154 tol=2.85
2024-07-27 23:36:54,796 alphafold2_multimer_v3_model_5_seed_000 took 655.0s (30 recycles)
2024-07-27 23:36:55,389 reranking models by 'multimer' metric
2024-07-27 23:36:58,731 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 23:38:36,296 Relaxation took 100.9s
2024-07-27 23:38:36,296 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.7 pTM=0.4 ipTM=0.247
2024-07-27 23:39:47,218 Relaxation took 70.9s
2024-07-27 23:39:47,218 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.9 pTM=0.396 ipTM=0.225
2024-07-27 23:40:53,972 Relaxation took 66.8s
2024-07-27 23:40:53,972 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=75.9 pTM=0.418 ipTM=0.189
2024-07-27 23:41:56,557 Relaxation took 62.6s
2024-07-27 23:41:56,557 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75.3 pTM=0.402 ipTM=0.154
2024-07-27 23:43:56,417 Relaxation took 119.9s
2024-07-27 23:43:56,418 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=74.8 pTM=0.401 ipTM=0.145
2024-07-27 23:43:58,202 Done