2024-07-27 22:43:30,213 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-27 22:43:30,542 Running on GPU
2024-07-27 22:43:34,210 Found 6 citations for tools or databases
2024-07-27 22:43:34,210 Query 1/1: TP53_RAB40A (length 670)
2024-07-27 22:43:34,857 Sleeping for 6s. Reason: PENDING
2024-07-27 22:43:41,277 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:43:48,743 Sleeping for 6s. Reason: RUNNING
2024-07-27 22:43:55,165 Sleeping for 9s. Reason: RUNNING
2024-07-27 22:44:04,617 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:44:13,047 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:44:21,492 Sleeping for 9s. Reason: RUNNING
2024-07-27 22:44:30,958 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:44:38,395 Sleeping for 7s. Reason: RUNNING
2024-07-27 22:44:45,835 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:44:56,821 Sleeping for 9s. Reason: PENDING
2024-07-27 22:45:06,262 Sleeping for 5s. Reason: RUNNING
2024-07-27 22:45:11,695 Sleeping for 10s. Reason: RUNNING
2024-07-27 22:45:22,130 Sleeping for 8s. Reason: RUNNING
2024-07-27 22:45:30,555 Sleeping for 10s. Reason: RUNNING
2024-07-27 22:45:40,975 Sleeping for 6s. Reason: RUNNING
2024-07-27 22:45:49,605 Setting max_seq=508, max_extra_seq=2048
2024-07-27 22:48:51,908 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.4 pTM=0.393 ipTM=0.183
2024-07-27 22:49:01,060 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.5 pTM=0.393 ipTM=0.18 tol=7.89
2024-07-27 22:49:10,229 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58 pTM=0.391 ipTM=0.177 tol=3.38
2024-07-27 22:49:19,412 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.5 pTM=0.388 ipTM=0.173 tol=4.02
2024-07-27 22:49:28,614 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.4 pTM=0.387 ipTM=0.17 tol=3.38
2024-07-27 22:49:37,803 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.6 pTM=0.388 ipTM=0.174 tol=2.19
2024-07-27 22:49:47,007 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.1 pTM=0.389 ipTM=0.178 tol=3.31
2024-07-27 22:49:56,266 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.5 pTM=0.387 ipTM=0.175 tol=2.81
2024-07-27 22:50:05,489 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.5 pTM=0.389 ipTM=0.174 tol=2.72
2024-07-27 22:50:14,714 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.4 pTM=0.389 ipTM=0.175 tol=3.19
2024-07-27 22:50:23,940 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.7 pTM=0.391 ipTM=0.181 tol=3.41
2024-07-27 22:50:33,178 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.8 pTM=0.392 ipTM=0.181 tol=3.32
2024-07-27 22:50:42,412 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.3 pTM=0.392 ipTM=0.184 tol=2.31
2024-07-27 22:50:51,652 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.5 pTM=0.391 ipTM=0.181 tol=1.77
2024-07-27 22:51:00,906 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.2 pTM=0.395 ipTM=0.188 tol=2.01
2024-07-27 22:51:10,149 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.1 pTM=0.392 ipTM=0.182 tol=2.03
2024-07-27 22:51:19,402 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.9 pTM=0.394 ipTM=0.186 tol=1.73
2024-07-27 22:51:28,646 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.9 pTM=0.393 ipTM=0.183 tol=2.7
2024-07-27 22:51:37,905 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.3 pTM=0.396 ipTM=0.189 tol=8.32
2024-07-27 22:51:47,167 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.9 pTM=0.392 ipTM=0.181 tol=3.74
2024-07-27 22:51:56,430 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.9 pTM=0.393 ipTM=0.182 tol=3.08
2024-07-27 22:52:05,691 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.1 pTM=0.394 ipTM=0.184 tol=2.21
2024-07-27 22:52:14,942 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.3 pTM=0.396 ipTM=0.192 tol=1.82
2024-07-27 22:52:24,206 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.4 pTM=0.394 ipTM=0.186 tol=1.7
2024-07-27 22:52:33,467 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.3 pTM=0.396 ipTM=0.189 tol=1.79
2024-07-27 22:52:42,723 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.2 pTM=0.394 ipTM=0.186 tol=1.18
2024-07-27 22:52:51,981 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.2 pTM=0.396 ipTM=0.194 tol=3.1
2024-07-27 22:53:01,241 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.2 pTM=0.394 ipTM=0.185 tol=2.23
2024-07-27 22:53:10,506 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.2 pTM=0.396 ipTM=0.192 tol=1.33
2024-07-27 22:53:19,770 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.2 pTM=0.391 ipTM=0.18 tol=1.66
2024-07-27 22:53:29,033 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.4 pTM=0.395 ipTM=0.189 tol=0.958
2024-07-27 22:53:29,034 alphafold2_multimer_v3_model_1_seed_000 took 454.5s (30 recycles)
2024-07-27 22:53:38,601 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.3 pTM=0.394 ipTM=0.194
2024-07-27 22:53:47,895 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.6 pTM=0.393 ipTM=0.184 tol=8.52
2024-07-27 22:53:57,196 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.3 pTM=0.39 ipTM=0.174 tol=5.3
2024-07-27 22:54:06,501 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=60.5 pTM=0.397 ipTM=0.19 tol=3.19
2024-07-27 22:54:15,809 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=60.4 pTM=0.399 ipTM=0.194 tol=3.25
2024-07-27 22:54:25,133 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=60.2 pTM=0.394 ipTM=0.184 tol=2.22
2024-07-27 22:54:34,445 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=60.2 pTM=0.396 ipTM=0.186 tol=2.18
2024-07-27 22:54:43,755 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=60.1 pTM=0.397 ipTM=0.189 tol=2.07
2024-07-27 22:54:53,067 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=60 pTM=0.392 ipTM=0.179 tol=2.29
2024-07-27 22:55:02,386 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.9 pTM=0.387 ipTM=0.169 tol=3.72
2024-07-27 22:55:11,720 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=60 pTM=0.387 ipTM=0.169 tol=3.21
2024-07-27 22:55:21,023 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.1 pTM=0.389 ipTM=0.17 tol=1.66
2024-07-27 22:55:30,335 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.8 pTM=0.387 ipTM=0.169 tol=2.96
2024-07-27 22:55:39,652 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=60.1 pTM=0.387 ipTM=0.167 tol=1.77
2024-07-27 22:55:48,979 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=60.3 pTM=0.388 ipTM=0.17 tol=2.3
2024-07-27 22:55:58,290 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=60.2 pTM=0.387 ipTM=0.17 tol=1.81
2024-07-27 22:56:07,613 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.3 pTM=0.388 ipTM=0.172 tol=2.62
2024-07-27 22:56:16,919 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.9 pTM=0.387 ipTM=0.168 tol=3.2
2024-07-27 22:56:26,244 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.3 pTM=0.387 ipTM=0.169 tol=2.45
2024-07-27 22:56:35,553 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59.8 pTM=0.388 ipTM=0.169 tol=2.95
2024-07-27 22:56:44,866 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60 pTM=0.387 ipTM=0.168 tol=1.1
2024-07-27 22:56:54,171 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60 pTM=0.389 ipTM=0.173 tol=2.2
2024-07-27 22:57:03,481 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.8 pTM=0.386 ipTM=0.168 tol=1.38
2024-07-27 22:57:12,791 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=59.8 pTM=0.388 ipTM=0.171 tol=1.23
2024-07-27 22:57:22,097 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.7 pTM=0.388 ipTM=0.17 tol=1.08
2024-07-27 22:57:31,406 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=60.1 pTM=0.389 ipTM=0.173 tol=1.89
2024-07-27 22:57:40,704 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59.6 pTM=0.388 ipTM=0.174 tol=3.63
2024-07-27 22:57:50,007 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.9 pTM=0.388 ipTM=0.171 tol=3.66
2024-07-27 22:57:59,317 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.6 pTM=0.386 ipTM=0.169 tol=1.62
2024-07-27 22:58:08,619 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.9 pTM=0.387 ipTM=0.17 tol=2.1
2024-07-27 22:58:17,927 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.8 pTM=0.386 ipTM=0.168 tol=2.45
2024-07-27 22:58:17,928 alphafold2_multimer_v3_model_2_seed_000 took 288.6s (30 recycles)
2024-07-27 22:58:27,527 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=57.2 pTM=0.388 ipTM=0.176
2024-07-27 22:58:36,844 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59 pTM=0.39 ipTM=0.173 tol=4.95
2024-07-27 22:58:46,173 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.2 pTM=0.392 ipTM=0.174 tol=4.98
2024-07-27 22:58:55,513 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.4 pTM=0.392 ipTM=0.176 tol=4.09
2024-07-27 22:59:04,849 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.4 pTM=0.392 ipTM=0.176 tol=5.27
2024-07-27 22:59:14,171 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.2 pTM=0.393 ipTM=0.179 tol=3.2
2024-07-27 22:59:23,505 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.9 pTM=0.394 ipTM=0.183 tol=6.5
2024-07-27 22:59:32,851 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.3 pTM=0.397 ipTM=0.191 tol=3.71
2024-07-27 22:59:42,196 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.9 pTM=0.399 ipTM=0.192 tol=6.16
2024-07-27 22:59:51,540 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.7 pTM=0.396 ipTM=0.18 tol=13.9
2024-07-27 23:00:00,882 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.1 pTM=0.393 ipTM=0.177 tol=8.16
2024-07-27 23:00:10,233 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.9 pTM=0.395 ipTM=0.179 tol=8.61
2024-07-27 23:00:19,573 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.1 pTM=0.395 ipTM=0.18 tol=5.32
2024-07-27 23:00:28,918 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.4 pTM=0.394 ipTM=0.179 tol=6.25
2024-07-27 23:00:38,272 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.7 pTM=0.394 ipTM=0.181 tol=4.41
2024-07-27 23:00:47,625 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.5 pTM=0.395 ipTM=0.187 tol=10.8
2024-07-27 23:00:56,987 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.6 pTM=0.392 ipTM=0.178 tol=10.5
2024-07-27 23:01:06,341 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.8 pTM=0.395 ipTM=0.188 tol=4.05
2024-07-27 23:01:15,694 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.2 pTM=0.393 ipTM=0.183 tol=3.63
2024-07-27 23:01:25,034 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58 pTM=0.394 ipTM=0.185 tol=2.93
2024-07-27 23:01:34,389 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.2 pTM=0.395 ipTM=0.188 tol=2.11
2024-07-27 23:01:43,734 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.1 pTM=0.395 ipTM=0.189 tol=4.04
2024-07-27 23:01:53,089 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.2 pTM=0.397 ipTM=0.196 tol=3.13
2024-07-27 23:02:02,447 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.2 pTM=0.396 ipTM=0.19 tol=2.44
2024-07-27 23:02:11,798 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.4 pTM=0.399 ipTM=0.198 tol=2.08
2024-07-27 23:02:21,136 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.2 pTM=0.396 ipTM=0.192 tol=1.52
2024-07-27 23:02:30,484 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.4 pTM=0.401 ipTM=0.204 tol=1.84
2024-07-27 23:02:39,825 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.5 pTM=0.399 ipTM=0.198 tol=1.89
2024-07-27 23:02:49,165 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.6 pTM=0.401 ipTM=0.205 tol=1.99
2024-07-27 23:02:58,500 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.3 pTM=0.397 ipTM=0.197 tol=2.31
2024-07-27 23:03:07,845 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.6 pTM=0.403 ipTM=0.209 tol=1.71
2024-07-27 23:03:07,846 alphafold2_multimer_v3_model_3_seed_000 took 289.6s (30 recycles)
2024-07-27 23:03:17,422 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.4 pTM=0.404 ipTM=0.218
2024-07-27 23:03:26,755 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.6 pTM=0.391 ipTM=0.191 tol=14.1
2024-07-27 23:03:36,077 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.7 pTM=0.394 ipTM=0.193 tol=6.02
2024-07-27 23:03:45,403 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.7 pTM=0.393 ipTM=0.192 tol=8.41
2024-07-27 23:03:54,718 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.7 pTM=0.391 ipTM=0.239 tol=4.59
2024-07-27 23:04:04,039 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.6 pTM=0.394 ipTM=0.2 tol=5.39
2024-07-27 23:04:13,352 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.8 pTM=0.393 ipTM=0.22 tol=4.35
2024-07-27 23:04:22,679 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.1 pTM=0.394 ipTM=0.205 tol=2.79
2024-07-27 23:04:31,996 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.9 pTM=0.394 ipTM=0.194 tol=2.32
2024-07-27 23:04:41,304 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.8 pTM=0.393 ipTM=0.186 tol=5.15
2024-07-27 23:04:50,626 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.9 pTM=0.389 ipTM=0.188 tol=2.75
2024-07-27 23:04:59,956 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.1 pTM=0.393 ipTM=0.187 tol=2.65
2024-07-27 23:05:09,276 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.8 pTM=0.392 ipTM=0.186 tol=2.54
2024-07-27 23:05:18,603 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.2 pTM=0.392 ipTM=0.189 tol=6.92
2024-07-27 23:05:27,938 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.4 pTM=0.393 ipTM=0.188 tol=3.75
2024-07-27 23:05:37,267 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.2 pTM=0.392 ipTM=0.187 tol=4.87
2024-07-27 23:05:46,593 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.2 pTM=0.393 ipTM=0.187 tol=5.36
2024-07-27 23:05:55,915 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.2 pTM=0.394 ipTM=0.186 tol=5.01
2024-07-27 23:06:05,246 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.9 pTM=0.393 ipTM=0.19 tol=4.81
2024-07-27 23:06:14,569 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.3 pTM=0.395 ipTM=0.197 tol=7.55
2024-07-27 23:06:23,892 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57 pTM=0.394 ipTM=0.194 tol=4.43
2024-07-27 23:06:33,215 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.7 pTM=0.393 ipTM=0.189 tol=6.63
2024-07-27 23:06:42,538 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.2 pTM=0.389 ipTM=0.178 tol=2.76
2024-07-27 23:06:51,872 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.7 pTM=0.392 ipTM=0.184 tol=3.17
2024-07-27 23:07:01,204 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.1 pTM=0.391 ipTM=0.181 tol=2.97
2024-07-27 23:07:10,526 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.9 pTM=0.394 ipTM=0.213 tol=2.1
2024-07-27 23:07:19,847 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.7 pTM=0.392 ipTM=0.186 tol=2.2
2024-07-27 23:07:29,173 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.7 pTM=0.396 ipTM=0.195 tol=2.55
2024-07-27 23:07:38,493 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.6 pTM=0.391 ipTM=0.19 tol=3.55
2024-07-27 23:07:47,816 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.8 pTM=0.392 ipTM=0.189 tol=3.58
2024-07-27 23:07:57,147 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.9 pTM=0.391 ipTM=0.185 tol=3.56
2024-07-27 23:07:57,148 alphafold2_multimer_v3_model_4_seed_000 took 289.0s (30 recycles)
2024-07-27 23:08:06,732 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55 pTM=0.412 ipTM=0.228
2024-07-27 23:08:16,077 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.1 pTM=0.399 ipTM=0.188 tol=13
2024-07-27 23:08:25,430 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57 pTM=0.395 ipTM=0.182 tol=12.3
2024-07-27 23:08:34,806 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.3 pTM=0.396 ipTM=0.191 tol=9.38
2024-07-27 23:08:44,187 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.8 pTM=0.394 ipTM=0.187 tol=5.37
2024-07-27 23:08:53,556 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.7 pTM=0.396 ipTM=0.192 tol=5.11
2024-07-27 23:09:02,930 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.8 pTM=0.396 ipTM=0.191 tol=3.71
2024-07-27 23:09:12,319 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.7 pTM=0.396 ipTM=0.191 tol=4.82
2024-07-27 23:09:21,705 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.6 pTM=0.396 ipTM=0.189 tol=5.42
2024-07-27 23:09:31,071 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.6 pTM=0.394 ipTM=0.183 tol=3.53
2024-07-27 23:09:40,441 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.9 pTM=0.396 ipTM=0.19 tol=2.48
2024-07-27 23:09:49,811 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.8 pTM=0.396 ipTM=0.19 tol=2.94
2024-07-27 23:09:59,180 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.9 pTM=0.398 ipTM=0.197 tol=4.8
2024-07-27 23:10:08,559 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.5 pTM=0.394 ipTM=0.186 tol=6.05
2024-07-27 23:10:17,935 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.9 pTM=0.398 ipTM=0.196 tol=4.2
2024-07-27 23:10:27,304 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.7 pTM=0.395 ipTM=0.187 tol=6.45
2024-07-27 23:10:36,669 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.8 pTM=0.398 ipTM=0.197 tol=6.58
2024-07-27 23:10:46,044 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.9 pTM=0.393 ipTM=0.184 tol=2.29
2024-07-27 23:10:55,405 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.8 pTM=0.398 ipTM=0.197 tol=7.06
2024-07-27 23:11:04,777 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.6 pTM=0.393 ipTM=0.185 tol=3.03
2024-07-27 23:11:14,132 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.8 pTM=0.397 ipTM=0.195 tol=3.35
2024-07-27 23:11:23,503 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.7 pTM=0.393 ipTM=0.184 tol=3.37
2024-07-27 23:11:32,856 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.8 pTM=0.397 ipTM=0.198 tol=1.8
2024-07-27 23:11:42,226 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58 pTM=0.394 ipTM=0.185 tol=4.48
2024-07-27 23:11:51,590 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.9 pTM=0.399 ipTM=0.201 tol=2.22
2024-07-27 23:12:00,944 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.8 pTM=0.395 ipTM=0.186 tol=2.24
2024-07-27 23:12:10,306 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58 pTM=0.404 ipTM=0.21 tol=4.79
2024-07-27 23:12:19,666 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58 pTM=0.395 ipTM=0.186 tol=4.88
2024-07-27 23:12:29,021 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58 pTM=0.401 ipTM=0.204 tol=3.99
2024-07-27 23:12:38,383 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.8 pTM=0.392 ipTM=0.182 tol=5.46
2024-07-27 23:12:47,737 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.8 pTM=0.399 ipTM=0.201 tol=6.68
2024-07-27 23:12:47,737 alphafold2_multimer_v3_model_5_seed_000 took 290.3s (30 recycles)
2024-07-27 23:12:48,025 reranking models by 'multimer' metric
2024-07-27 23:12:51,305 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-27 23:13:38,427 Relaxation took 50.4s
2024-07-27 23:13:38,427 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.6 pTM=0.403 ipTM=0.209
2024-07-27 23:14:07,902 Relaxation took 29.5s
2024-07-27 23:14:07,902 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.8 pTM=0.399 ipTM=0.201
2024-07-27 23:14:29,567 Relaxation took 21.7s
2024-07-27 23:14:29,567 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.4 pTM=0.395 ipTM=0.189
2024-07-27 23:15:18,450 Relaxation took 48.9s
2024-07-27 23:15:18,450 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.9 pTM=0.391 ipTM=0.185
2024-07-27 23:15:52,725 Relaxation took 34.3s
2024-07-27 23:15:52,726 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.8 pTM=0.386 ipTM=0.168
2024-07-27 23:15:53,969 Done