2024-07-28 02:39:21,159 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 02:39:21,472 Running on GPU
2024-07-28 02:39:25,009 Found 6 citations for tools or databases
2024-07-28 02:39:25,009 Query 1/1: TRIM35_FBXL5 (length 1185)
2024-07-28 02:39:25,470 Sleeping for 6s. Reason: PENDING
2024-07-28 02:39:31,894 Sleeping for 5s. Reason: RUNNING
2024-07-28 02:39:37,338 Sleeping for 8s. Reason: RUNNING
2024-07-28 02:39:45,784 Sleeping for 7s. Reason: RUNNING
2024-07-28 02:39:53,222 Sleeping for 10s. Reason: RUNNING
2024-07-28 02:40:03,647 Sleeping for 7s. Reason: RUNNING
2024-07-28 02:40:11,069 Sleeping for 10s. Reason: RUNNING
2024-07-28 02:40:21,491 Sleeping for 10s. Reason: RUNNING
2024-07-28 02:40:31,910 Sleeping for 8s. Reason: RUNNING
2024-07-28 02:40:40,330 Sleeping for 10s. Reason: RUNNING
2024-07-28 02:40:50,766 Sleeping for 5s. Reason: RUNNING
2024-07-28 02:40:56,177 Sleeping for 9s. Reason: RUNNING
2024-07-28 02:41:05,596 Sleeping for 5s. Reason: RUNNING
2024-07-28 02:41:11,035 Sleeping for 7s. Reason: RUNNING
2024-07-28 02:41:18,465 Sleeping for 5s. Reason: RUNNING
2024-07-28 02:41:23,891 Sleeping for 7s. Reason: RUNNING
2024-07-28 02:41:31,328 Sleeping for 10s. Reason: RUNNING
2024-07-28 02:41:41,776 Sleeping for 6s. Reason: RUNNING
2024-07-28 02:41:48,209 Sleeping for 8s. Reason: RUNNING
2024-07-28 02:41:56,614 Sleeping for 10s. Reason: RUNNING
2024-07-28 02:42:07,049 Sleeping for 7s. Reason: RUNNING
2024-07-28 02:42:14,470 Sleeping for 6s. Reason: RUNNING
2024-07-28 02:42:22,763 Sleeping for 6s. Reason: PENDING
2024-07-28 02:42:29,202 Sleeping for 7s. Reason: RUNNING
2024-07-28 02:42:36,640 Sleeping for 8s. Reason: RUNNING
2024-07-28 02:42:45,054 Sleeping for 6s. Reason: RUNNING
2024-07-28 02:42:51,460 Sleeping for 6s. Reason: RUNNING
2024-07-28 02:42:57,867 Sleeping for 8s. Reason: RUNNING
2024-07-28 02:43:06,300 Sleeping for 6s. Reason: RUNNING
2024-07-28 02:43:12,716 Sleeping for 5s. Reason: RUNNING
2024-07-28 02:43:18,153 Sleeping for 5s. Reason: RUNNING
2024-07-28 02:43:23,573 Sleeping for 7s. Reason: RUNNING
2024-07-28 02:43:30,986 Sleeping for 10s. Reason: RUNNING
2024-07-28 02:43:41,426 Sleeping for 8s. Reason: RUNNING
2024-07-28 02:43:53,597 Setting max_seq=508, max_extra_seq=2048
2024-07-28 02:47:43,491 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.9 pTM=0.368 ipTM=0.156
2024-07-28 02:48:17,426 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=64.6 pTM=0.371 ipTM=0.148 tol=21.4
2024-07-28 02:48:51,588 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=64.7 pTM=0.373 ipTM=0.154 tol=6.18
2024-07-28 02:49:25,871 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.1 pTM=0.377 ipTM=0.156 tol=3.08
2024-07-28 02:50:00,242 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.8 pTM=0.377 ipTM=0.161 tol=6.02
2024-07-28 02:50:34,680 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.6 pTM=0.373 ipTM=0.158 tol=7.41
2024-07-28 02:51:09,004 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.3 pTM=0.386 ipTM=0.197 tol=12.2
2024-07-28 02:51:43,319 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.3 pTM=0.39 ipTM=0.206 tol=8.3
2024-07-28 02:52:17,658 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.3 pTM=0.39 ipTM=0.208 tol=5.71
2024-07-28 02:52:52,011 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.4 pTM=0.388 ipTM=0.209 tol=3.53
2024-07-28 02:53:26,378 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.9 pTM=0.393 ipTM=0.208 tol=6.45
2024-07-28 02:54:00,768 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.7 pTM=0.391 ipTM=0.211 tol=4.06
2024-07-28 02:54:35,198 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68 pTM=0.396 ipTM=0.235 tol=2.84
2024-07-28 02:55:09,622 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.9 pTM=0.396 ipTM=0.217 tol=8.09
2024-07-28 02:55:44,058 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.9 pTM=0.395 ipTM=0.219 tol=4.8
2024-07-28 02:56:18,441 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.5 pTM=0.403 ipTM=0.213 tol=6.73
2024-07-28 02:56:52,815 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.1 pTM=0.408 ipTM=0.222 tol=6.98
2024-07-28 02:57:27,205 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.7 pTM=0.414 ipTM=0.221 tol=5.69
2024-07-28 02:58:01,595 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.9 pTM=0.408 ipTM=0.215 tol=6.17
2024-07-28 02:58:35,975 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.8 pTM=0.408 ipTM=0.211 tol=2.73
2024-07-28 02:59:10,453 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.1 pTM=0.409 ipTM=0.227 tol=3.26
2024-07-28 02:59:44,833 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.1 pTM=0.414 ipTM=0.22 tol=2.86
2024-07-28 03:00:19,291 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.1 pTM=0.41 ipTM=0.22 tol=3.93
2024-07-28 03:00:53,754 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.9 pTM=0.41 ipTM=0.218 tol=4.96
2024-07-28 03:01:28,228 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.1 pTM=0.407 ipTM=0.222 tol=5.87
2024-07-28 03:02:02,612 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.8 pTM=0.403 ipTM=0.209 tol=5.31
2024-07-28 03:02:36,966 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.3 pTM=0.408 ipTM=0.215 tol=2.41
2024-07-28 03:03:11,345 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.9 pTM=0.402 ipTM=0.204 tol=4
2024-07-28 03:03:45,700 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.4 pTM=0.415 ipTM=0.218 tol=9.05
2024-07-28 03:04:20,120 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.9 pTM=0.403 ipTM=0.216 tol=9.12
2024-07-28 03:04:54,533 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.2 pTM=0.412 ipTM=0.229 tol=5.81
2024-07-28 03:04:54,534 alphafold2_multimer_v3_model_1_seed_000 took 1255.9s (30 recycles)
2024-07-28 03:05:29,853 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=63.9 pTM=0.373 ipTM=0.167
2024-07-28 03:06:04,337 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.8 pTM=0.374 ipTM=0.153 tol=13.2
2024-07-28 03:06:38,797 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.6 pTM=0.37 ipTM=0.15 tol=8.78
2024-07-28 03:07:13,297 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.6 pTM=0.374 ipTM=0.152 tol=8.76
2024-07-28 03:07:47,795 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.1 pTM=0.373 ipTM=0.155 tol=5.17
2024-07-28 03:08:22,270 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.2 pTM=0.371 ipTM=0.154 tol=5.01
2024-07-28 03:08:56,728 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.2 pTM=0.378 ipTM=0.162 tol=5.29
2024-07-28 03:09:31,225 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.1 pTM=0.38 ipTM=0.164 tol=4.57
2024-07-28 03:10:05,663 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.1 pTM=0.378 ipTM=0.164 tol=5.08
2024-07-28 03:10:40,087 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.1 pTM=0.374 ipTM=0.159 tol=2.62
2024-07-28 03:11:14,503 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=67.2 pTM=0.377 ipTM=0.161 tol=3.5
2024-07-28 03:11:48,943 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67 pTM=0.38 ipTM=0.163 tol=2.85
2024-07-28 03:12:23,425 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.8 pTM=0.378 ipTM=0.162 tol=3.72
2024-07-28 03:12:57,885 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67 pTM=0.379 ipTM=0.162 tol=4.04
2024-07-28 03:13:32,354 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.8 pTM=0.375 ipTM=0.156 tol=4.27
2024-07-28 03:14:06,848 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.6 pTM=0.377 ipTM=0.159 tol=3.3
2024-07-28 03:14:41,294 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.6 pTM=0.378 ipTM=0.159 tol=4.99
2024-07-28 03:15:15,729 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.6 pTM=0.376 ipTM=0.159 tol=4.23
2024-07-28 03:15:50,177 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.7 pTM=0.374 ipTM=0.158 tol=4.98
2024-07-28 03:16:24,613 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.9 pTM=0.373 ipTM=0.158 tol=4.4
2024-07-28 03:16:59,092 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.8 pTM=0.375 ipTM=0.159 tol=3.93
2024-07-28 03:17:33,598 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.8 pTM=0.376 ipTM=0.158 tol=4.72
2024-07-28 03:18:08,079 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.9 pTM=0.372 ipTM=0.156 tol=4.13
2024-07-28 03:18:42,567 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.8 pTM=0.372 ipTM=0.155 tol=5.09
2024-07-28 03:19:17,062 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.7 pTM=0.371 ipTM=0.156 tol=3.58
2024-07-28 03:19:51,549 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.3 pTM=0.367 ipTM=0.153 tol=2.94
2024-07-28 03:20:26,024 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.5 pTM=0.371 ipTM=0.156 tol=2.83
2024-07-28 03:21:00,504 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.3 pTM=0.372 ipTM=0.156 tol=2.29
2024-07-28 03:21:35,001 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.1 pTM=0.377 ipTM=0.161 tol=3.79
2024-07-28 03:22:09,515 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.2 pTM=0.378 ipTM=0.16 tol=4.59
2024-07-28 03:22:44,024 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.9 pTM=0.379 ipTM=0.161 tol=2.93
2024-07-28 03:22:44,026 alphafold2_multimer_v3_model_2_seed_000 took 1068.6s (30 recycles)
2024-07-28 03:23:19,545 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.1 pTM=0.37 ipTM=0.16
2024-07-28 03:23:54,220 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.7 pTM=0.376 ipTM=0.162 tol=17.7
2024-07-28 03:24:28,855 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.6 pTM=0.374 ipTM=0.157 tol=7.51
2024-07-28 03:25:03,434 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.9 pTM=0.371 ipTM=0.144 tol=15.6
2024-07-28 03:25:37,905 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.1 pTM=0.365 ipTM=0.139 tol=16.4
2024-07-28 03:26:12,334 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65 pTM=0.368 ipTM=0.139 tol=5.07
2024-07-28 03:26:46,919 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=64.4 pTM=0.37 ipTM=0.148 tol=10
2024-07-28 03:27:21,344 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.4 pTM=0.372 ipTM=0.146 tol=6.3
2024-07-28 03:27:55,761 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.9 pTM=0.376 ipTM=0.151 tol=7.43
2024-07-28 03:28:30,203 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.8 pTM=0.383 ipTM=0.158 tol=5.97
2024-07-28 03:29:04,635 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=64.1 pTM=0.387 ipTM=0.16 tol=3.07
2024-07-28 03:29:39,050 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.3 pTM=0.391 ipTM=0.16 tol=3.34
2024-07-28 03:30:13,518 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.8 pTM=0.39 ipTM=0.159 tol=3.1
2024-07-28 03:30:47,954 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.1 pTM=0.391 ipTM=0.162 tol=4.75
2024-07-28 03:31:22,400 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.2 pTM=0.391 ipTM=0.16 tol=2.57
2024-07-28 03:31:56,820 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64 pTM=0.391 ipTM=0.158 tol=2.75
2024-07-28 03:32:31,220 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.8 pTM=0.391 ipTM=0.161 tol=2.86
2024-07-28 03:33:05,631 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.6 pTM=0.393 ipTM=0.165 tol=3.02
2024-07-28 03:33:40,059 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.6 pTM=0.392 ipTM=0.163 tol=2.69
2024-07-28 03:34:14,509 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.8 pTM=0.391 ipTM=0.159 tol=2.61
2024-07-28 03:34:48,943 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.7 pTM=0.394 ipTM=0.163 tol=2.77
2024-07-28 03:35:23,374 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64 pTM=0.393 ipTM=0.16 tol=2.62
2024-07-28 03:35:57,803 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.6 pTM=0.393 ipTM=0.163 tol=3.63
2024-07-28 03:36:32,256 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.5 pTM=0.393 ipTM=0.16 tol=3.35
2024-07-28 03:37:06,697 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.7 pTM=0.393 ipTM=0.162 tol=5.02
2024-07-28 03:37:41,175 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64 pTM=0.387 ipTM=0.153 tol=5.65
2024-07-28 03:38:15,621 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.9 pTM=0.389 ipTM=0.158 tol=3.96
2024-07-28 03:38:50,049 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.8 pTM=0.39 ipTM=0.16 tol=3.04
2024-07-28 03:39:24,484 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.8 pTM=0.393 ipTM=0.162 tol=2.34
2024-07-28 03:39:58,927 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.2 pTM=0.396 ipTM=0.162 tol=2.94
2024-07-28 03:40:33,381 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.2 pTM=0.395 ipTM=0.162 tol=3.09
2024-07-28 03:40:33,382 alphafold2_multimer_v3_model_3_seed_000 took 1068.5s (30 recycles)
2024-07-28 03:41:08,678 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.7 pTM=0.357 ipTM=0.163
2024-07-28 03:41:43,142 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.6 pTM=0.378 ipTM=0.156 tol=14.2
2024-07-28 03:42:17,579 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.7 pTM=0.381 ipTM=0.164 tol=9.98
2024-07-28 03:42:52,012 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=66.2 pTM=0.382 ipTM=0.159 tol=5.38
2024-07-28 03:43:26,456 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.8 pTM=0.388 ipTM=0.169 tol=3.85
2024-07-28 03:44:00,874 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.8 pTM=0.388 ipTM=0.168 tol=3.95
2024-07-28 03:44:35,252 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.1 pTM=0.395 ipTM=0.17 tol=3.6
2024-07-28 03:45:09,727 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.1 pTM=0.397 ipTM=0.173 tol=4.11
2024-07-28 03:45:44,062 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66 pTM=0.398 ipTM=0.175 tol=3.64
2024-07-28 03:46:18,410 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.8 pTM=0.394 ipTM=0.173 tol=4.01
2024-07-28 03:46:52,716 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.1 pTM=0.396 ipTM=0.172 tol=4.41
2024-07-28 03:47:26,990 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.1 pTM=0.397 ipTM=0.172 tol=4.86
2024-07-28 03:48:01,251 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.8 pTM=0.398 ipTM=0.172 tol=3.51
2024-07-28 03:48:35,477 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.1 pTM=0.399 ipTM=0.175 tol=3.74
2024-07-28 03:49:09,688 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.9 pTM=0.398 ipTM=0.173 tol=3.67
2024-07-28 03:49:43,917 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.2 pTM=0.397 ipTM=0.172 tol=3.72
2024-07-28 03:50:18,164 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.1 pTM=0.396 ipTM=0.171 tol=2.79
2024-07-28 03:50:52,361 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.1 pTM=0.4 ipTM=0.176 tol=2.67
2024-07-28 03:51:26,596 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65.6 pTM=0.399 ipTM=0.177 tol=3.48
2024-07-28 03:52:00,871 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66 pTM=0.399 ipTM=0.174 tol=4.23
2024-07-28 03:52:35,157 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65.6 pTM=0.4 ipTM=0.178 tol=3.94
2024-07-28 03:53:09,528 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.5 pTM=0.399 ipTM=0.173 tol=3.55
2024-07-28 03:53:43,867 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.8 pTM=0.397 ipTM=0.176 tol=2.92
2024-07-28 03:54:18,192 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.8 pTM=0.394 ipTM=0.17 tol=4.03
2024-07-28 03:54:52,456 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.6 pTM=0.395 ipTM=0.173 tol=2.53
2024-07-28 03:55:26,822 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.6 pTM=0.396 ipTM=0.175 tol=3.04
2024-07-28 03:56:01,089 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.6 pTM=0.397 ipTM=0.175 tol=3.06
2024-07-28 03:56:35,380 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65.8 pTM=0.399 ipTM=0.175 tol=2.49
2024-07-28 03:57:09,684 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65.9 pTM=0.4 ipTM=0.172 tol=2.66
2024-07-28 03:57:44,091 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.2 pTM=0.403 ipTM=0.174 tol=2.96
2024-07-28 03:58:18,424 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.2 pTM=0.404 ipTM=0.18 tol=3.8
2024-07-28 03:58:18,425 alphafold2_multimer_v3_model_4_seed_000 took 1064.2s (30 recycles)
2024-07-28 03:58:53,662 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.5 pTM=0.382 ipTM=0.188
2024-07-28 03:59:28,129 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.1 pTM=0.389 ipTM=0.175 tol=9.67
2024-07-28 04:00:02,577 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.2 pTM=0.394 ipTM=0.192 tol=8.21
2024-07-28 04:00:37,009 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.1 pTM=0.406 ipTM=0.269 tol=5.04
2024-07-28 04:01:11,431 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.2 pTM=0.409 ipTM=0.304 tol=3.71
2024-07-28 04:01:45,812 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.3 pTM=0.417 ipTM=0.342 tol=2.96
2024-07-28 04:02:20,186 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.7 pTM=0.421 ipTM=0.355 tol=3.2
2024-07-28 04:02:54,540 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.1 pTM=0.433 ipTM=0.401 tol=2.95
2024-07-28 04:03:28,867 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.2 pTM=0.435 ipTM=0.422 tol=3.89
2024-07-28 04:04:03,166 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.4 pTM=0.442 ipTM=0.458 tol=3.97
2024-07-28 04:04:37,519 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67 pTM=0.45 ipTM=0.49 tol=4.6
2024-07-28 04:05:11,881 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.3 pTM=0.458 ipTM=0.516 tol=6.34
2024-07-28 04:05:46,266 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.2 pTM=0.463 ipTM=0.536 tol=5.72
2024-07-28 04:06:20,637 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.6 pTM=0.467 ipTM=0.559 tol=4.08
2024-07-28 04:06:55,002 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.7 pTM=0.471 ipTM=0.579 tol=3.63
2024-07-28 04:07:29,376 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.6 pTM=0.474 ipTM=0.589 tol=4.05
2024-07-28 04:08:03,759 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.6 pTM=0.475 ipTM=0.592 tol=4.98
2024-07-28 04:08:38,132 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.6 pTM=0.476 ipTM=0.594 tol=5.05
2024-07-28 04:09:12,491 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.4 pTM=0.475 ipTM=0.589 tol=3.09
2024-07-28 04:09:46,859 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.5 pTM=0.475 ipTM=0.594 tol=2.4
2024-07-28 04:10:21,213 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.5 pTM=0.475 ipTM=0.591 tol=2.33
2024-07-28 04:10:55,579 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.8 pTM=0.477 ipTM=0.595 tol=5.02
2024-07-28 04:11:29,957 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.4 pTM=0.473 ipTM=0.588 tol=4.6
2024-07-28 04:12:04,342 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.6 pTM=0.474 ipTM=0.588 tol=5.86
2024-07-28 04:12:38,747 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.6 pTM=0.474 ipTM=0.592 tol=1.81
2024-07-28 04:13:13,151 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.6 pTM=0.473 ipTM=0.588 tol=1.94
2024-07-28 04:13:47,565 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.9 pTM=0.476 ipTM=0.59 tol=2.18
2024-07-28 04:14:21,917 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.8 pTM=0.477 ipTM=0.594 tol=3.32
2024-07-28 04:14:56,322 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.8 pTM=0.478 ipTM=0.598 tol=3.5
2024-07-28 04:15:30,808 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.1 pTM=0.481 ipTM=0.606 tol=1.7
2024-07-28 04:16:05,187 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.9 pTM=0.479 ipTM=0.604 tol=3.61
2024-07-28 04:16:05,188 alphafold2_multimer_v3_model_5_seed_000 took 1065.9s (30 recycles)
2024-07-28 04:16:06,023 reranking models by 'multimer' metric
2024-07-28 04:16:08,943 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 04:17:53,801 Relaxation took 107.8s
2024-07-28 04:17:53,801 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.9 pTM=0.479 ipTM=0.604
2024-07-28 04:20:30,967 Relaxation took 157.2s
2024-07-28 04:20:30,967 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.2 pTM=0.412 ipTM=0.229
2024-07-28 04:23:56,885 Relaxation took 205.9s
2024-07-28 04:23:56,885 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.2 pTM=0.404 ipTM=0.18
2024-07-28 04:27:13,638 Relaxation took 196.8s
2024-07-28 04:27:13,638 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.2 pTM=0.395 ipTM=0.162
2024-07-28 04:29:33,291 Relaxation took 139.7s
2024-07-28 04:29:33,291 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.9 pTM=0.379 ipTM=0.161
2024-07-28 04:29:35,536 Done