2024-07-28 03:05:11,107 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 03:05:11,428 Running on GPU 2024-07-28 03:05:14,716 Found 6 citations for tools or databases 2024-07-28 03:05:14,716 Query 1/1: TRIM35_GAN (length 1091) 2024-07-28 03:05:15,169 Sleeping for 8s. Reason: PENDING 2024-07-28 03:05:23,595 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:05:31,018 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:05:37,478 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:05:47,896 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:05:54,320 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:06:03,739 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:06:09,170 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:06:19,589 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:06:27,038 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:06:34,458 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:06:43,909 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:06:53,318 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:07:01,749 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:07:10,173 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:07:20,615 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:07:28,052 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:07:37,466 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:07:44,899 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:07:53,344 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:08:01,771 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:08:12,193 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:08:21,633 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:08:28,083 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:08:38,498 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:08:46,750 Sleeping for 5s. Reason: PENDING 2024-07-28 03:08:52,159 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:09:02,580 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:09:12,015 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:09:18,429 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:09:27,833 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:09:37,250 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:09:46,689 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:09:57,117 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:10:07,557 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:10:15,982 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:10:21,398 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:10:26,819 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:10:33,259 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:10:41,681 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:10:48,118 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:10:55,563 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:11:00,968 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:11:09,402 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:11:14,856 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:11:23,462 Setting max_seq=508, max_extra_seq=2048 2024-07-28 03:14:54,200 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=78.2 pTM=0.529 ipTM=0.146 2024-07-28 03:15:21,821 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=81.3 pTM=0.54 ipTM=0.134 tol=7.68 2024-07-28 03:15:49,619 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=81.1 pTM=0.543 ipTM=0.133 tol=6.02 2024-07-28 03:16:17,531 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=80.4 pTM=0.537 ipTM=0.135 tol=5.5 2024-07-28 03:16:45,530 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=80.9 pTM=0.539 ipTM=0.136 tol=1.9 2024-07-28 03:17:13,577 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=80.9 pTM=0.539 ipTM=0.139 tol=2.78 2024-07-28 03:17:41,686 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=80.9 pTM=0.538 ipTM=0.141 tol=3.09 2024-07-28 03:18:09,874 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=81.1 pTM=0.538 ipTM=0.148 tol=3.99 2024-07-28 03:18:38,039 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=81.2 pTM=0.54 ipTM=0.166 tol=3.13 2024-07-28 03:19:06,195 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=80.8 pTM=0.542 ipTM=0.17 tol=1.26 2024-07-28 03:19:34,389 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=81.1 pTM=0.542 ipTM=0.172 tol=1.97 2024-07-28 03:20:02,553 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=81.2 pTM=0.543 ipTM=0.172 tol=1.49 2024-07-28 03:20:30,743 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=81 pTM=0.541 ipTM=0.171 tol=0.924 2024-07-28 03:20:58,930 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=80.8 pTM=0.542 ipTM=0.174 tol=0.519 2024-07-28 03:21:27,095 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=80.9 pTM=0.541 ipTM=0.183 tol=1.89 2024-07-28 03:21:55,249 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=80.9 pTM=0.546 ipTM=0.19 tol=2 2024-07-28 03:22:23,429 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=81.2 pTM=0.54 ipTM=0.172 tol=1.27 2024-07-28 03:22:51,595 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=80.6 pTM=0.54 ipTM=0.172 tol=1.81 2024-07-28 03:23:19,727 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=81.1 pTM=0.54 ipTM=0.17 tol=1.14 2024-07-28 03:23:47,844 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=81.1 pTM=0.549 ipTM=0.188 tol=1.96 2024-07-28 03:24:15,949 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=81.4 pTM=0.542 ipTM=0.17 tol=1.89 2024-07-28 03:24:44,043 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=81 pTM=0.551 ipTM=0.195 tol=2.22 2024-07-28 03:25:12,137 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=81.1 pTM=0.538 ipTM=0.165 tol=1.95 2024-07-28 03:25:40,198 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=80.8 pTM=0.545 ipTM=0.193 tol=1.09 2024-07-28 03:26:08,301 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=81.4 pTM=0.545 ipTM=0.183 tol=1.17 2024-07-28 03:26:36,387 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=80.9 pTM=0.538 ipTM=0.18 tol=1.15 2024-07-28 03:27:04,483 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=80.9 pTM=0.533 ipTM=0.172 tol=1.34 2024-07-28 03:27:32,546 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=81.1 pTM=0.55 ipTM=0.209 tol=1.31 2024-07-28 03:28:00,634 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=81 pTM=0.541 ipTM=0.176 tol=0.95 2024-07-28 03:28:28,725 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=80.7 pTM=0.538 ipTM=0.182 tol=1.43 2024-07-28 03:28:56,788 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=81.2 pTM=0.548 ipTM=0.19 tol=1.67 2024-07-28 03:28:56,789 alphafold2_multimer_v3_model_1_seed_000 took 1048.4s (30 recycles) 2024-07-28 03:29:25,674 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=77.2 pTM=0.531 ipTM=0.156 2024-07-28 03:29:53,854 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=81.6 pTM=0.542 ipTM=0.154 tol=8.45 2024-07-28 03:30:21,993 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=82.6 pTM=0.552 ipTM=0.17 tol=8 2024-07-28 03:30:50,183 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=82.4 pTM=0.555 ipTM=0.17 tol=3.62 2024-07-28 03:31:18,368 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=82.3 pTM=0.55 ipTM=0.164 tol=3.13 2024-07-28 03:31:46,557 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=82.3 pTM=0.549 ipTM=0.163 tol=1.74 2024-07-28 03:32:14,719 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=82.2 pTM=0.551 ipTM=0.173 tol=12.5 2024-07-28 03:32:42,841 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=82.4 pTM=0.56 ipTM=0.201 tol=1.32 2024-07-28 03:33:10,993 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=82.1 pTM=0.548 ipTM=0.181 tol=3.16 2024-07-28 03:33:39,166 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=82.4 pTM=0.546 ipTM=0.164 tol=2.76 2024-07-28 03:34:07,340 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=82.2 pTM=0.545 ipTM=0.161 tol=3.29 2024-07-28 03:34:35,537 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=82.5 pTM=0.548 ipTM=0.157 tol=4.25 2024-07-28 03:35:03,705 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=82.3 pTM=0.551 ipTM=0.164 tol=4.86 2024-07-28 03:35:31,863 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=82.4 pTM=0.552 ipTM=0.165 tol=2.3 2024-07-28 03:36:00,049 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=82.4 pTM=0.552 ipTM=0.165 tol=0.494 2024-07-28 03:36:00,050 alphafold2_multimer_v3_model_2_seed_000 took 422.5s (14 recycles) 2024-07-28 03:36:29,013 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=78.9 pTM=0.507 ipTM=0.146 2024-07-28 03:36:57,261 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=81.2 pTM=0.525 ipTM=0.137 tol=15.7 2024-07-28 03:37:25,415 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=81.1 pTM=0.539 ipTM=0.17 tol=17.5 2024-07-28 03:37:53,650 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=80.9 pTM=0.528 ipTM=0.137 tol=4.34 2024-07-28 03:38:21,911 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80.6 pTM=0.528 ipTM=0.132 tol=8.95 2024-07-28 03:38:50,153 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=80.9 pTM=0.533 ipTM=0.148 tol=5.65 2024-07-28 03:39:18,395 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.6 pTM=0.521 ipTM=0.137 tol=7.44 2024-07-28 03:39:46,604 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=80.9 pTM=0.521 ipTM=0.141 tol=5.27 2024-07-28 03:40:14,828 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=80.9 pTM=0.523 ipTM=0.14 tol=4.95 2024-07-28 03:40:43,017 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=80.7 pTM=0.527 ipTM=0.141 tol=7.31 2024-07-28 03:41:11,213 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=80.9 pTM=0.52 ipTM=0.14 tol=6.56 2024-07-28 03:41:39,395 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=80.9 pTM=0.524 ipTM=0.143 tol=6.02 2024-07-28 03:42:07,572 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=80.4 pTM=0.515 ipTM=0.136 tol=6.95 2024-07-28 03:42:35,714 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=80.8 pTM=0.523 ipTM=0.148 tol=6.37 2024-07-28 03:43:03,834 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=80.6 pTM=0.517 ipTM=0.141 tol=5.54 2024-07-28 03:43:31,989 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=81 pTM=0.525 ipTM=0.151 tol=5.91 2024-07-28 03:44:00,117 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=80.3 pTM=0.516 ipTM=0.145 tol=5.62 2024-07-28 03:44:28,268 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=80.9 pTM=0.522 ipTM=0.152 tol=4.77 2024-07-28 03:44:56,431 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=80.6 pTM=0.517 ipTM=0.142 tol=4.92 2024-07-28 03:45:24,573 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=80.4 pTM=0.519 ipTM=0.146 tol=5.6 2024-07-28 03:45:52,709 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=80.6 pTM=0.518 ipTM=0.144 tol=5.41 2024-07-28 03:46:20,848 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=81 pTM=0.525 ipTM=0.144 tol=5.72 2024-07-28 03:46:48,987 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=80.6 pTM=0.521 ipTM=0.14 tol=5.48 2024-07-28 03:47:17,098 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=80.8 pTM=0.525 ipTM=0.142 tol=6.57 2024-07-28 03:47:45,281 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=80.8 pTM=0.521 ipTM=0.139 tol=5.5 2024-07-28 03:48:13,497 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=80.8 pTM=0.525 ipTM=0.143 tol=5.89 2024-07-28 03:48:41,761 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=80.8 pTM=0.522 ipTM=0.138 tol=6.99 2024-07-28 03:49:10,034 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=80.9 pTM=0.528 ipTM=0.144 tol=5.64 2024-07-28 03:49:38,344 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=80.4 pTM=0.521 ipTM=0.135 tol=4.64 2024-07-28 03:50:06,634 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=80.9 pTM=0.528 ipTM=0.143 tol=5.36 2024-07-28 03:50:34,902 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=80.4 pTM=0.52 ipTM=0.14 tol=5.34 2024-07-28 03:50:34,903 alphafold2_multimer_v3_model_3_seed_000 took 874.1s (30 recycles) 2024-07-28 03:51:03,814 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.2 pTM=0.528 ipTM=0.143 2024-07-28 03:51:32,041 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=82.4 pTM=0.553 ipTM=0.143 tol=14.3 2024-07-28 03:52:00,285 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=82.8 pTM=0.554 ipTM=0.141 tol=5.91 2024-07-28 03:52:28,528 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=82.9 pTM=0.556 ipTM=0.145 tol=3.12 2024-07-28 03:52:56,755 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=82.8 pTM=0.553 ipTM=0.149 tol=7.24 2024-07-28 03:53:24,994 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=82.9 pTM=0.558 ipTM=0.152 tol=2.97 2024-07-28 03:53:53,206 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=83 pTM=0.557 ipTM=0.156 tol=4.68 2024-07-28 03:54:21,398 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=82.9 pTM=0.557 ipTM=0.164 tol=1.23 2024-07-28 03:54:49,562 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=83 pTM=0.557 ipTM=0.174 tol=3.34 2024-07-28 03:55:17,697 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=83 pTM=0.559 ipTM=0.172 tol=2.72 2024-07-28 03:55:45,849 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=82.6 pTM=0.556 ipTM=0.167 tol=2.19 2024-07-28 03:56:14,003 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=82.8 pTM=0.556 ipTM=0.168 tol=2.32 2024-07-28 03:56:42,172 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=82.8 pTM=0.557 ipTM=0.166 tol=2.54 2024-07-28 03:57:10,313 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=82.6 pTM=0.561 ipTM=0.208 tol=2.32 2024-07-28 03:57:38,506 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=82.9 pTM=0.557 ipTM=0.164 tol=3.02 2024-07-28 03:58:06,699 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=82.8 pTM=0.559 ipTM=0.167 tol=2.59 2024-07-28 03:58:34,876 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=82.7 pTM=0.556 ipTM=0.163 tol=0.979 2024-07-28 03:59:03,026 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=82.6 pTM=0.557 ipTM=0.163 tol=1.27 2024-07-28 03:59:31,189 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=82.7 pTM=0.558 ipTM=0.163 tol=2.71 2024-07-28 03:59:59,362 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=82.7 pTM=0.554 ipTM=0.162 tol=2.34 2024-07-28 04:00:27,556 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=82.8 pTM=0.556 ipTM=0.166 tol=1.54 2024-07-28 04:00:55,709 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=82.8 pTM=0.557 ipTM=0.171 tol=3.29 2024-07-28 04:01:23,850 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=82.8 pTM=0.557 ipTM=0.166 tol=3.19 2024-07-28 04:01:52,030 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=82.5 pTM=0.556 ipTM=0.165 tol=2.83 2024-07-28 04:02:20,204 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=82.9 pTM=0.557 ipTM=0.166 tol=1.36 2024-07-28 04:02:48,327 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=82.9 pTM=0.558 ipTM=0.18 tol=3.44 2024-07-28 04:03:16,475 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=83.1 pTM=0.556 ipTM=0.168 tol=2.75 2024-07-28 04:03:44,668 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=82.8 pTM=0.558 ipTM=0.162 tol=2.46 2024-07-28 04:04:12,846 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=82.9 pTM=0.557 ipTM=0.164 tol=3 2024-07-28 04:04:40,997 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=82.8 pTM=0.557 ipTM=0.169 tol=2.38 2024-07-28 04:05:09,112 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=82.6 pTM=0.561 ipTM=0.199 tol=1.38 2024-07-28 04:05:09,113 alphafold2_multimer_v3_model_4_seed_000 took 873.5s (30 recycles) 2024-07-28 04:05:37,923 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=76.4 pTM=0.538 ipTM=0.167 2024-07-28 04:06:06,106 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=80.4 pTM=0.522 ipTM=0.132 tol=13.9 2024-07-28 04:06:34,274 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=80.4 pTM=0.544 ipTM=0.157 tol=11.5 2024-07-28 04:07:02,464 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=80.1 pTM=0.543 ipTM=0.162 tol=9.16 2024-07-28 04:07:30,617 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=80.4 pTM=0.543 ipTM=0.157 tol=4.03 2024-07-28 04:07:58,770 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=80.1 pTM=0.55 ipTM=0.166 tol=2.96 2024-07-28 04:08:26,934 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=80.8 pTM=0.552 ipTM=0.159 tol=2.26 2024-07-28 04:08:55,071 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=80.8 pTM=0.554 ipTM=0.177 tol=4.14 2024-07-28 04:09:23,260 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=80.5 pTM=0.555 ipTM=0.179 tol=3.01 2024-07-28 04:09:51,491 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=80.7 pTM=0.557 ipTM=0.178 tol=1.87 2024-07-28 04:10:19,714 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=80.8 pTM=0.561 ipTM=0.187 tol=5.66 2024-07-28 04:10:47,914 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=81.1 pTM=0.569 ipTM=0.211 tol=2.58 2024-07-28 04:11:16,149 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=81.1 pTM=0.559 ipTM=0.179 tol=1.29 2024-07-28 04:11:44,369 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=81.1 pTM=0.566 ipTM=0.196 tol=1.15 2024-07-28 04:12:12,580 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=81.5 pTM=0.569 ipTM=0.202 tol=0.589 2024-07-28 04:12:40,804 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=81.5 pTM=0.562 ipTM=0.184 tol=1.57 2024-07-28 04:13:09,036 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=81.6 pTM=0.566 ipTM=0.195 tol=1.82 2024-07-28 04:13:37,290 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=81.2 pTM=0.561 ipTM=0.183 tol=1.33 2024-07-28 04:14:05,540 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=81.6 pTM=0.56 ipTM=0.179 tol=1.32 2024-07-28 04:14:33,756 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=81.3 pTM=0.568 ipTM=0.202 tol=1.48 2024-07-28 04:15:01,969 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=81.4 pTM=0.557 ipTM=0.178 tol=1.05 2024-07-28 04:15:30,169 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=81.4 pTM=0.563 ipTM=0.19 tol=0.874 2024-07-28 04:15:58,307 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=81.4 pTM=0.565 ipTM=0.196 tol=2 2024-07-28 04:16:26,392 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=81.4 pTM=0.569 ipTM=0.208 tol=1.53 2024-07-28 04:16:54,508 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=81.7 pTM=0.557 ipTM=0.176 tol=1.62 2024-07-28 04:17:22,584 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=81.3 pTM=0.566 ipTM=0.2 tol=1.23 2024-07-28 04:17:50,690 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=81.8 pTM=0.559 ipTM=0.179 tol=1.48 2024-07-28 04:18:18,786 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=81.4 pTM=0.562 ipTM=0.188 tol=1.13 2024-07-28 04:18:46,889 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=81.5 pTM=0.562 ipTM=0.192 tol=1.68 2024-07-28 04:19:15,009 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=81.4 pTM=0.563 ipTM=0.198 tol=1.05 2024-07-28 04:19:43,159 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=81.6 pTM=0.562 ipTM=0.19 tol=1.18 2024-07-28 04:19:43,160 alphafold2_multimer_v3_model_5_seed_000 took 873.3s (30 recycles) 2024-07-28 04:19:43,881 reranking models by 'multimer' metric 2024-07-28 04:19:46,940 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 04:22:32,415 Relaxation took 168.5s 2024-07-28 04:22:32,415 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=82.6 pTM=0.561 ipTM=0.199 2024-07-28 04:24:54,342 Relaxation took 141.9s 2024-07-28 04:24:54,342 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=81.6 pTM=0.562 ipTM=0.19 2024-07-28 04:25:41,150 Relaxation took 46.8s 2024-07-28 04:25:41,151 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=81.2 pTM=0.548 ipTM=0.19 2024-07-28 04:26:46,866 Relaxation took 65.7s 2024-07-28 04:26:46,866 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=82.4 pTM=0.552 ipTM=0.165 2024-07-28 04:29:17,379 Relaxation took 150.5s 2024-07-28 04:29:17,379 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=80.4 pTM=0.52 ipTM=0.14 2024-07-28 04:29:19,474 Done