2024-07-28 03:18:43,235 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 03:18:43,572 Running on GPU 2024-07-28 03:18:47,024 Found 6 citations for tools or databases 2024-07-28 03:18:47,024 Query 1/1: TRIM45_KLHL18 (length 1137) 2024-07-28 03:18:47,496 Sleeping for 5s. Reason: PENDING 2024-07-28 03:18:52,918 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:18:58,345 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:19:04,783 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:19:13,227 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:19:23,650 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:19:31,090 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:19:39,502 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:19:46,938 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:19:56,372 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:20:05,845 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:20:14,283 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:20:23,727 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:20:29,168 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:20:39,609 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:20:45,025 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:20:52,442 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:21:00,878 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:21:08,307 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:21:17,725 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:21:28,146 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:21:35,570 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:21:43,984 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:21:52,414 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:21:59,848 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:22:09,283 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:22:19,735 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:22:29,044 Sleeping for 7s. Reason: PENDING 2024-07-28 03:22:36,466 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:22:45,886 Sleeping for 7s. Reason: RUNNING 2024-07-28 03:22:53,294 Sleeping for 6s. Reason: RUNNING 2024-07-28 03:22:59,721 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:23:09,173 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:23:19,620 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:23:30,046 Sleeping for 10s. Reason: RUNNING 2024-07-28 03:23:40,503 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:23:49,917 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:23:58,360 Sleeping for 5s. Reason: RUNNING 2024-07-28 03:24:03,808 Sleeping for 8s. Reason: RUNNING 2024-07-28 03:24:12,247 Sleeping for 9s. Reason: RUNNING 2024-07-28 03:24:26,476 Setting max_seq=508, max_extra_seq=2048 2024-07-28 03:28:09,882 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.4 pTM=0.381 ipTM=0.152 2024-07-28 03:28:39,526 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.8 pTM=0.395 ipTM=0.181 tol=7.09 2024-07-28 03:29:09,320 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.2 pTM=0.441 ipTM=0.286 tol=8.59 2024-07-28 03:29:39,198 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=73.1 pTM=0.386 ipTM=0.194 tol=6.48 2024-07-28 03:30:09,143 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.8 pTM=0.383 ipTM=0.187 tol=2.41 2024-07-28 03:30:39,135 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.8 pTM=0.385 ipTM=0.19 tol=2.3 2024-07-28 03:31:09,161 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.4 pTM=0.381 ipTM=0.19 tol=1.86 2024-07-28 03:31:39,216 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.6 pTM=0.385 ipTM=0.196 tol=1.41 2024-07-28 03:32:09,271 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.8 pTM=0.38 ipTM=0.188 tol=2.37 2024-07-28 03:32:39,277 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.9 pTM=0.431 ipTM=0.289 tol=3.85 2024-07-28 03:33:09,318 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.8 pTM=0.388 ipTM=0.205 tol=3.02 2024-07-28 03:33:39,345 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72 pTM=0.383 ipTM=0.193 tol=1.99 2024-07-28 03:34:09,381 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.5 pTM=0.383 ipTM=0.185 tol=1.44 2024-07-28 03:34:39,418 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.8 pTM=0.383 ipTM=0.183 tol=1.42 2024-07-28 03:35:09,438 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.8 pTM=0.434 ipTM=0.275 tol=5.07 2024-07-28 03:35:39,467 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.6 pTM=0.383 ipTM=0.195 tol=4.08 2024-07-28 03:36:09,640 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.8 pTM=0.369 ipTM=0.148 tol=11.8 2024-07-28 03:36:39,819 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.7 pTM=0.372 ipTM=0.15 tol=6.95 2024-07-28 03:37:10,014 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.6 pTM=0.383 ipTM=0.272 tol=17.7 2024-07-28 03:37:40,241 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=75.3 pTM=0.367 ipTM=0.148 tol=5.96 2024-07-28 03:38:10,498 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.3 pTM=0.365 ipTM=0.152 tol=7.71 2024-07-28 03:38:40,664 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.4 pTM=0.367 ipTM=0.154 tol=6.75 2024-07-28 03:39:10,816 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.4 pTM=0.369 ipTM=0.157 tol=5.79 2024-07-28 03:39:41,008 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.6 pTM=0.376 ipTM=0.254 tol=19.6 2024-07-28 03:40:11,185 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=75.2 pTM=0.367 ipTM=0.16 tol=6.55 2024-07-28 03:40:41,354 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.6 pTM=0.368 ipTM=0.148 tol=13.6 2024-07-28 03:41:11,520 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.8 pTM=0.367 ipTM=0.151 tol=7.72 2024-07-28 03:41:41,697 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74 pTM=0.371 ipTM=0.155 tol=4.68 2024-07-28 03:42:11,827 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.8 pTM=0.38 ipTM=0.179 tol=4.13 2024-07-28 03:42:41,956 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.2 pTM=0.392 ipTM=0.22 tol=13.7 2024-07-28 03:43:12,145 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=73.8 pTM=0.387 ipTM=0.275 tol=8.73 2024-07-28 03:43:12,146 alphafold2_multimer_v3_model_1_seed_000 took 1121.0s (30 recycles) 2024-07-28 03:43:43,166 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.3 pTM=0.394 ipTM=0.151 2024-07-28 03:44:13,291 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=74.9 pTM=0.388 ipTM=0.166 tol=10.9 2024-07-28 03:44:43,391 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=75.1 pTM=0.42 ipTM=0.337 tol=9.09 2024-07-28 03:45:13,412 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=75.8 pTM=0.441 ipTM=0.369 tol=6.83 2024-07-28 03:45:43,456 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.1 pTM=0.433 ipTM=0.349 tol=2.42 2024-07-28 03:46:13,507 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=76.5 pTM=0.403 ipTM=0.245 tol=4.32 2024-07-28 03:46:43,501 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=75.8 pTM=0.425 ipTM=0.331 tol=3.2 2024-07-28 03:47:13,515 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.2 pTM=0.397 ipTM=0.219 tol=4.13 2024-07-28 03:47:43,487 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.2 pTM=0.419 ipTM=0.302 tol=4.08 2024-07-28 03:48:13,433 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.9 pTM=0.417 ipTM=0.293 tol=1.79 2024-07-28 03:48:43,402 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=76.4 pTM=0.402 ipTM=0.234 tol=2.15 2024-07-28 03:49:13,364 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.9 pTM=0.419 ipTM=0.306 tol=2.42 2024-07-28 03:49:43,327 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.9 pTM=0.41 ipTM=0.265 tol=2.36 2024-07-28 03:50:13,282 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.1 pTM=0.406 ipTM=0.244 tol=1.73 2024-07-28 03:50:43,205 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=75.8 pTM=0.426 ipTM=0.324 tol=2.82 2024-07-28 03:51:13,154 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=76.5 pTM=0.396 ipTM=0.21 tol=4.6 2024-07-28 03:51:43,073 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=75.9 pTM=0.426 ipTM=0.33 tol=5.12 2024-07-28 03:52:13,033 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=76.4 pTM=0.399 ipTM=0.234 tol=4.03 2024-07-28 03:52:42,965 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.1 pTM=0.404 ipTM=0.244 tol=1.74 2024-07-28 03:53:12,922 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.9 pTM=0.425 ipTM=0.319 tol=2.45 2024-07-28 03:53:42,884 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.5 pTM=0.402 ipTM=0.231 tol=3.22 2024-07-28 03:54:12,826 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.8 pTM=0.423 ipTM=0.318 tol=2.9 2024-07-28 03:54:42,780 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76.1 pTM=0.404 ipTM=0.254 tol=2.38 2024-07-28 03:55:12,722 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.8 pTM=0.424 ipTM=0.323 tol=2.38 2024-07-28 03:55:42,705 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=76 pTM=0.419 ipTM=0.302 tol=1.22 2024-07-28 03:56:12,691 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=76 pTM=0.416 ipTM=0.287 tol=1.05 2024-07-28 03:56:42,727 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=76.1 pTM=0.419 ipTM=0.303 tol=1.23 2024-07-28 03:57:12,782 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=76.1 pTM=0.408 ipTM=0.264 tol=1.75 2024-07-28 03:57:42,813 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=75.9 pTM=0.415 ipTM=0.289 tol=1.36 2024-07-28 03:58:12,900 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.1 pTM=0.406 ipTM=0.236 tol=1.89 2024-07-28 03:58:42,983 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=76.1 pTM=0.404 ipTM=0.226 tol=1.02 2024-07-28 03:58:42,984 alphafold2_multimer_v3_model_2_seed_000 took 930.1s (30 recycles) 2024-07-28 03:59:13,978 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.5 pTM=0.368 ipTM=0.142 2024-07-28 03:59:44,168 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.9 pTM=0.385 ipTM=0.142 tol=28.8 2024-07-28 04:00:14,340 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.9 pTM=0.391 ipTM=0.282 tol=33.3 2024-07-28 04:00:44,464 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.1 pTM=0.395 ipTM=0.216 tol=27.3 2024-07-28 04:01:14,512 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.8 pTM=0.403 ipTM=0.229 tol=4.11 2024-07-28 04:01:44,617 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.6 pTM=0.397 ipTM=0.165 tol=4.07 2024-07-28 04:02:14,724 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.9 pTM=0.397 ipTM=0.164 tol=4.69 2024-07-28 04:02:44,813 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=77.1 pTM=0.401 ipTM=0.159 tol=1.8 2024-07-28 04:03:14,895 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=77.2 pTM=0.394 ipTM=0.162 tol=1.76 2024-07-28 04:03:44,951 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=77.4 pTM=0.404 ipTM=0.168 tol=1.87 2024-07-28 04:04:15,024 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=77.6 pTM=0.402 ipTM=0.167 tol=1.84 2024-07-28 04:04:45,103 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.3 pTM=0.405 ipTM=0.169 tol=2.25 2024-07-28 04:05:15,219 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=77.3 pTM=0.398 ipTM=0.164 tol=2.78 2024-07-28 04:05:45,342 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=77.4 pTM=0.397 ipTM=0.164 tol=1.72 2024-07-28 04:06:15,495 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=77.4 pTM=0.396 ipTM=0.162 tol=0.872 2024-07-28 04:06:45,655 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=77.4 pTM=0.4 ipTM=0.16 tol=1.3 2024-07-28 04:07:15,840 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=77.6 pTM=0.397 ipTM=0.163 tol=1.93 2024-07-28 04:07:45,997 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77.2 pTM=0.4 ipTM=0.161 tol=2.3 2024-07-28 04:08:16,132 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=77.4 pTM=0.398 ipTM=0.162 tol=3.34 2024-07-28 04:08:46,245 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.4 pTM=0.397 ipTM=0.161 tol=3.14 2024-07-28 04:09:16,387 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=77.6 pTM=0.395 ipTM=0.162 tol=6.18 2024-07-28 04:09:46,525 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77 pTM=0.399 ipTM=0.164 tol=6 2024-07-28 04:10:16,723 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.2 pTM=0.398 ipTM=0.163 tol=10.6 2024-07-28 04:10:46,835 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.8 pTM=0.4 ipTM=0.167 tol=12.3 2024-07-28 04:11:16,872 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=75.7 pTM=0.472 ipTM=0.373 tol=7.69 2024-07-28 04:11:46,891 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76 pTM=0.481 ipTM=0.383 tol=4.13 2024-07-28 04:12:16,944 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76 pTM=0.481 ipTM=0.389 tol=2.79 2024-07-28 04:12:46,994 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=75.6 pTM=0.478 ipTM=0.385 tol=1.58 2024-07-28 04:13:17,036 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=74.9 pTM=0.482 ipTM=0.382 tol=2.03 2024-07-28 04:13:47,116 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=75.6 pTM=0.459 ipTM=0.343 tol=9.27 2024-07-28 04:14:17,189 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=75.2 pTM=0.474 ipTM=0.386 tol=9.44 2024-07-28 04:14:17,190 alphafold2_multimer_v3_model_3_seed_000 took 933.4s (30 recycles) 2024-07-28 04:14:48,109 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.8 pTM=0.374 ipTM=0.179 2024-07-28 04:15:18,180 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=73.1 pTM=0.395 ipTM=0.205 tol=8.32 2024-07-28 04:15:48,243 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=73.8 pTM=0.397 ipTM=0.195 tol=3.55 2024-07-28 04:16:18,294 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=74.2 pTM=0.402 ipTM=0.226 tol=3.41 2024-07-28 04:16:48,356 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=73.5 pTM=0.389 ipTM=0.193 tol=2.28 2024-07-28 04:17:18,441 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74.4 pTM=0.386 ipTM=0.191 tol=4.24 2024-07-28 04:17:48,530 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=73.3 pTM=0.39 ipTM=0.189 tol=3.18 2024-07-28 04:18:18,654 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.2 pTM=0.385 ipTM=0.185 tol=3.28 2024-07-28 04:18:48,744 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=73.7 pTM=0.385 ipTM=0.186 tol=2.57 2024-07-28 04:19:18,868 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=73.9 pTM=0.378 ipTM=0.177 tol=2.82 2024-07-28 04:19:48,983 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=73.4 pTM=0.384 ipTM=0.184 tol=2.7 2024-07-28 04:20:19,210 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.7 pTM=0.369 ipTM=0.147 tol=8.8 2024-07-28 04:20:49,425 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=75.1 pTM=0.379 ipTM=0.15 tol=14.4 2024-07-28 04:21:19,608 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=76.3 pTM=0.379 ipTM=0.151 tol=4.53 2024-07-28 04:21:49,716 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=75.6 pTM=0.403 ipTM=0.189 tol=5.77 2024-07-28 04:22:19,825 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=75.6 pTM=0.389 ipTM=0.296 tol=8.27 2024-07-28 04:22:49,878 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=76.1 pTM=0.438 ipTM=0.287 tol=5.88 2024-07-28 04:23:19,950 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.1 pTM=0.424 ipTM=0.258 tol=3.63 2024-07-28 04:23:49,962 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=75.8 pTM=0.471 ipTM=0.361 tol=5.05 2024-07-28 04:24:20,002 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77 pTM=0.437 ipTM=0.305 tol=3.67 2024-07-28 04:24:49,995 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=75.4 pTM=0.488 ipTM=0.388 tol=5.28 2024-07-28 04:25:20,023 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.1 pTM=0.429 ipTM=0.267 tol=5.99 2024-07-28 04:25:50,025 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75.8 pTM=0.487 ipTM=0.402 tol=5.74 2024-07-28 04:26:20,094 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=76.8 pTM=0.44 ipTM=0.307 tol=7.29 2024-07-28 04:26:50,099 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.8 pTM=0.473 ipTM=0.374 tol=4.05 2024-07-28 04:27:20,090 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=76.6 pTM=0.453 ipTM=0.344 tol=4.7 2024-07-28 04:27:50,014 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.6 pTM=0.487 ipTM=0.394 tol=3.18 2024-07-28 04:28:20,028 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77 pTM=0.421 ipTM=0.247 tol=5.61 2024-07-28 04:28:50,024 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=75.9 pTM=0.476 ipTM=0.382 tol=5.04 2024-07-28 04:29:19,991 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=76.9 pTM=0.439 ipTM=0.301 tol=6.54 2024-07-28 04:29:49,930 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75.8 pTM=0.477 ipTM=0.37 tol=5.01 2024-07-28 04:29:49,931 alphafold2_multimer_v3_model_4_seed_000 took 932.0s (30 recycles) 2024-07-28 04:30:20,914 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.3 pTM=0.366 ipTM=0.131 2024-07-28 04:30:51,032 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.4 pTM=0.441 ipTM=0.337 tol=16.2 2024-07-28 04:31:21,257 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=75.4 pTM=0.392 ipTM=0.171 tol=8.58 2024-07-28 04:31:51,309 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.7 pTM=0.495 ipTM=0.391 tol=25.4 2024-07-28 04:32:21,398 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=71.4 pTM=0.464 ipTM=0.325 tol=6.69 2024-07-28 04:32:51,463 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.7 pTM=0.48 ipTM=0.371 tol=5.78 2024-07-28 04:33:21,534 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.9 pTM=0.479 ipTM=0.386 tol=8.19 2024-07-28 04:33:51,597 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.6 pTM=0.497 ipTM=0.426 tol=7.15 2024-07-28 04:34:21,647 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.2 pTM=0.493 ipTM=0.415 tol=9.68 2024-07-28 04:34:51,684 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=71.1 pTM=0.494 ipTM=0.413 tol=8.48 2024-07-28 04:35:21,740 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.1 pTM=0.487 ipTM=0.407 tol=5.44 2024-07-28 04:35:51,768 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.9 pTM=0.492 ipTM=0.403 tol=8.38 2024-07-28 04:36:21,795 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.7 pTM=0.453 ipTM=0.324 tol=5.66 2024-07-28 04:36:51,816 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.2 pTM=0.452 ipTM=0.317 tol=6.13 2024-07-28 04:37:21,895 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72 pTM=0.442 ipTM=0.295 tol=7.13 2024-07-28 04:37:52,001 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.1 pTM=0.437 ipTM=0.264 tol=9.36 2024-07-28 04:38:22,108 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=72.2 pTM=0.447 ipTM=0.291 tol=8.16 2024-07-28 04:38:52,176 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.9 pTM=0.441 ipTM=0.28 tol=7.37 2024-07-28 04:39:22,327 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.8 pTM=0.43 ipTM=0.234 tol=8.76 2024-07-28 04:39:52,434 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.6 pTM=0.449 ipTM=0.317 tol=10.2 2024-07-28 04:40:22,564 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71.1 pTM=0.439 ipTM=0.259 tol=9.67 2024-07-28 04:40:52,725 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.9 pTM=0.436 ipTM=0.259 tol=5.84 2024-07-28 04:41:22,807 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.5 pTM=0.448 ipTM=0.285 tol=6.68 2024-07-28 04:41:52,926 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=72.1 pTM=0.428 ipTM=0.229 tol=6.68 2024-07-28 04:42:23,058 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.2 pTM=0.433 ipTM=0.249 tol=6.9 2024-07-28 04:42:53,202 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.9 pTM=0.437 ipTM=0.266 tol=5.23 2024-07-28 04:43:23,326 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.9 pTM=0.444 ipTM=0.28 tol=4.04 2024-07-28 04:43:53,501 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.8 pTM=0.427 ipTM=0.234 tol=5.7 2024-07-28 04:44:23,634 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.5 pTM=0.442 ipTM=0.269 tol=7.27 2024-07-28 04:44:53,811 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.4 pTM=0.434 ipTM=0.261 tol=7.27 2024-07-28 04:45:23,931 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.1 pTM=0.45 ipTM=0.292 tol=8.86 2024-07-28 04:45:23,932 alphafold2_multimer_v3_model_5_seed_000 took 933.2s (30 recycles) 2024-07-28 04:45:24,717 reranking models by 'multimer' metric 2024-07-28 04:45:26,355 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 04:46:46,600 Relaxation took 81.9s 2024-07-28 04:46:46,601 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=75.2 pTM=0.474 ipTM=0.386 2024-07-28 04:49:43,787 Relaxation took 177.2s 2024-07-28 04:49:43,787 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.8 pTM=0.477 ipTM=0.37 2024-07-28 04:52:28,072 Relaxation took 164.3s 2024-07-28 04:52:28,072 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.1 pTM=0.45 ipTM=0.292 2024-07-28 04:54:52,243 Relaxation took 144.2s 2024-07-28 04:54:52,243 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=73.8 pTM=0.387 ipTM=0.275 2024-07-28 04:56:07,781 Relaxation took 75.5s 2024-07-28 04:56:07,781 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.1 pTM=0.404 ipTM=0.226 2024-07-28 04:56:10,018 Done