2024-07-28 03:57:42,127 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 03:57:42,451 Running on GPU
2024-07-28 03:57:45,145 Found 6 citations for tools or databases
2024-07-28 03:57:45,146 Query 1/1: TRIM8_BTBD2 (length 1076)
2024-07-28 03:57:45,584 Sleeping for 5s. Reason: PENDING
2024-07-28 03:57:50,996 Sleeping for 10s. Reason: RUNNING
2024-07-28 03:58:01,427 Sleeping for 7s. Reason: RUNNING
2024-07-28 03:58:08,854 Sleeping for 6s. Reason: RUNNING
2024-07-28 03:58:15,265 Sleeping for 7s. Reason: RUNNING
2024-07-28 03:58:22,694 Sleeping for 6s. Reason: RUNNING
2024-07-28 03:58:29,108 Sleeping for 6s. Reason: RUNNING
2024-07-28 03:58:35,546 Sleeping for 9s. Reason: RUNNING
2024-07-28 03:58:44,974 Sleeping for 8s. Reason: RUNNING
2024-07-28 03:58:53,390 Sleeping for 7s. Reason: RUNNING
2024-07-28 03:59:00,804 Sleeping for 10s. Reason: RUNNING
2024-07-28 03:59:11,223 Sleeping for 5s. Reason: RUNNING
2024-07-28 03:59:16,646 Sleeping for 9s. Reason: RUNNING
2024-07-28 03:59:26,086 Sleeping for 9s. Reason: RUNNING
2024-07-28 03:59:35,512 Sleeping for 7s. Reason: RUNNING
2024-07-28 03:59:42,942 Sleeping for 8s. Reason: RUNNING
2024-07-28 03:59:51,383 Sleeping for 9s. Reason: RUNNING
2024-07-28 04:00:00,813 Sleeping for 7s. Reason: RUNNING
2024-07-28 04:00:08,231 Sleeping for 10s. Reason: RUNNING
2024-07-28 04:00:20,487 Sleeping for 7s. Reason: PENDING
2024-07-28 04:00:27,924 Sleeping for 7s. Reason: RUNNING
2024-07-28 04:00:35,351 Sleeping for 9s. Reason: RUNNING
2024-07-28 04:00:44,781 Sleeping for 9s. Reason: RUNNING
2024-07-28 04:00:54,208 Sleeping for 7s. Reason: RUNNING
2024-07-28 04:01:01,634 Sleeping for 10s. Reason: RUNNING
2024-07-28 04:01:12,061 Sleeping for 10s. Reason: RUNNING
2024-07-28 04:01:22,508 Sleeping for 5s. Reason: RUNNING
2024-07-28 04:01:27,918 Sleeping for 6s. Reason: RUNNING
2024-07-28 04:01:34,357 Sleeping for 7s. Reason: RUNNING
2024-07-28 04:01:41,787 Sleeping for 5s. Reason: RUNNING
2024-07-28 04:01:51,139 Setting max_seq=508, max_extra_seq=2048
2024-07-28 04:04:44,160 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.5 pTM=0.311 ipTM=0.211
2024-07-28 04:05:09,904 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.5 pTM=0.317 ipTM=0.143 tol=14.5
2024-07-28 04:05:35,668 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.9 pTM=0.322 ipTM=0.157 tol=8.73
2024-07-28 04:06:01,495 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.1 pTM=0.319 ipTM=0.223 tol=14.1
2024-07-28 04:06:27,391 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.4 pTM=0.314 ipTM=0.164 tol=8.06
2024-07-28 04:06:53,334 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.4 pTM=0.316 ipTM=0.169 tol=5.45
2024-07-28 04:07:19,263 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.8 pTM=0.315 ipTM=0.202 tol=8.7
2024-07-28 04:07:45,229 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.4 pTM=0.314 ipTM=0.202 tol=8.12
2024-07-28 04:08:11,179 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64 pTM=0.314 ipTM=0.2 tol=3.81
2024-07-28 04:08:37,118 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.1 pTM=0.318 ipTM=0.213 tol=3.68
2024-07-28 04:09:03,078 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64 pTM=0.316 ipTM=0.205 tol=6
2024-07-28 04:09:29,043 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.9 pTM=0.314 ipTM=0.204 tol=5.53
2024-07-28 04:09:55,046 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=63.6 pTM=0.316 ipTM=0.202 tol=2.1
2024-07-28 04:10:21,026 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=63.8 pTM=0.316 ipTM=0.207 tol=2.82
2024-07-28 04:10:47,040 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.8 pTM=0.314 ipTM=0.208 tol=5.2
2024-07-28 04:11:13,031 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64 pTM=0.316 ipTM=0.21 tol=4.72
2024-07-28 04:11:39,029 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.6 pTM=0.315 ipTM=0.209 tol=4.69
2024-07-28 04:12:05,016 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.4 pTM=0.317 ipTM=0.202 tol=2.34
2024-07-28 04:12:31,028 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.2 pTM=0.315 ipTM=0.212 tol=5.77
2024-07-28 04:12:57,033 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.3 pTM=0.316 ipTM=0.203 tol=6.63
2024-07-28 04:13:23,040 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.2 pTM=0.316 ipTM=0.206 tol=5.59
2024-07-28 04:13:49,062 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.5 pTM=0.316 ipTM=0.205 tol=3.74
2024-07-28 04:14:15,072 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.1 pTM=0.311 ipTM=0.208 tol=3.36
2024-07-28 04:14:41,077 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=63.9 pTM=0.314 ipTM=0.21 tol=2.16
2024-07-28 04:15:07,067 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.3 pTM=0.315 ipTM=0.213 tol=4.12
2024-07-28 04:15:33,067 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.1 pTM=0.317 ipTM=0.216 tol=4.97
2024-07-28 04:15:59,063 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.1 pTM=0.315 ipTM=0.213 tol=2
2024-07-28 04:16:25,052 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.9 pTM=0.315 ipTM=0.208 tol=1.8
2024-07-28 04:16:50,993 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.7 pTM=0.313 ipTM=0.208 tol=2.26
2024-07-28 04:17:16,964 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.8 pTM=0.317 ipTM=0.211 tol=4.62
2024-07-28 04:17:42,921 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.8 pTM=0.313 ipTM=0.21 tol=2.86
2024-07-28 04:17:42,922 alphafold2_multimer_v3_model_1_seed_000 took 947.1s (30 recycles)
2024-07-28 04:18:09,610 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.3 pTM=0.333 ipTM=0.138
2024-07-28 04:18:35,540 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.4 pTM=0.328 ipTM=0.139 tol=22.1
2024-07-28 04:19:01,447 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.8 pTM=0.331 ipTM=0.174 tol=21.2
2024-07-28 04:19:27,437 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.1 pTM=0.332 ipTM=0.137 tol=11.8
2024-07-28 04:19:53,436 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.9 pTM=0.332 ipTM=0.131 tol=9.58
2024-07-28 04:20:19,459 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64 pTM=0.331 ipTM=0.133 tol=8.2
2024-07-28 04:20:45,467 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64 pTM=0.331 ipTM=0.135 tol=10.6
2024-07-28 04:21:11,411 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.1 pTM=0.33 ipTM=0.134 tol=6.98
2024-07-28 04:21:37,359 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.9 pTM=0.33 ipTM=0.173 tol=14.7
2024-07-28 04:22:03,292 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.7 pTM=0.33 ipTM=0.15 tol=10.7
2024-07-28 04:22:29,222 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.8 pTM=0.331 ipTM=0.13 tol=9.52
2024-07-28 04:22:55,220 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.8 pTM=0.33 ipTM=0.129 tol=5.58
2024-07-28 04:23:21,231 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.5 pTM=0.333 ipTM=0.13 tol=4.23
2024-07-28 04:23:47,219 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.6 pTM=0.332 ipTM=0.133 tol=6.57
2024-07-28 04:24:13,225 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.4 pTM=0.331 ipTM=0.132 tol=5.15
2024-07-28 04:24:39,174 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.1 pTM=0.332 ipTM=0.133 tol=4.74
2024-07-28 04:25:05,130 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.9 pTM=0.334 ipTM=0.177 tol=13.1
2024-07-28 04:25:31,093 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.8 pTM=0.331 ipTM=0.156 tol=12.7
2024-07-28 04:25:57,062 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.6 pTM=0.336 ipTM=0.133 tol=11
2024-07-28 04:26:23,080 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.7 pTM=0.334 ipTM=0.13 tol=6.32
2024-07-28 04:26:49,067 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.4 pTM=0.336 ipTM=0.133 tol=6.05
2024-07-28 04:27:15,040 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.8 pTM=0.333 ipTM=0.13 tol=6.88
2024-07-28 04:27:41,017 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.5 pTM=0.331 ipTM=0.132 tol=7.52
2024-07-28 04:28:06,978 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.4 pTM=0.333 ipTM=0.134 tol=3.75
2024-07-28 04:28:32,958 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.5 pTM=0.33 ipTM=0.147 tol=13.4
2024-07-28 04:28:58,880 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64 pTM=0.331 ipTM=0.227 tol=12
2024-07-28 04:29:24,857 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.4 pTM=0.333 ipTM=0.137 tol=15.3
2024-07-28 04:29:50,793 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.6 pTM=0.331 ipTM=0.134 tol=16.2
2024-07-28 04:30:16,769 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.4 pTM=0.332 ipTM=0.132 tol=6.44
2024-07-28 04:30:42,824 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.6 pTM=0.335 ipTM=0.131 tol=5.38
2024-07-28 04:31:08,881 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.7 pTM=0.332 ipTM=0.132 tol=4.16
2024-07-28 04:31:08,882 alphafold2_multimer_v3_model_2_seed_000 took 805.3s (30 recycles)
2024-07-28 04:31:35,619 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.7 pTM=0.338 ipTM=0.156
2024-07-28 04:32:01,602 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.7 pTM=0.327 ipTM=0.213 tol=16.4
2024-07-28 04:32:27,612 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.2 pTM=0.33 ipTM=0.138 tol=13.8
2024-07-28 04:32:53,626 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=64.9 pTM=0.337 ipTM=0.148 tol=10.9
2024-07-28 04:33:19,635 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.4 pTM=0.336 ipTM=0.182 tol=5.63
2024-07-28 04:33:45,608 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66 pTM=0.338 ipTM=0.182 tol=4.45
2024-07-28 04:34:11,577 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.6 pTM=0.337 ipTM=0.165 tol=6.38
2024-07-28 04:34:37,548 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.2 pTM=0.338 ipTM=0.158 tol=3.61
2024-07-28 04:35:03,482 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.3 pTM=0.341 ipTM=0.173 tol=5.43
2024-07-28 04:35:29,457 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.1 pTM=0.339 ipTM=0.155 tol=5.56
2024-07-28 04:35:55,439 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.2 pTM=0.342 ipTM=0.153 tol=3.65
2024-07-28 04:36:21,388 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.8 pTM=0.339 ipTM=0.14 tol=2.95
2024-07-28 04:36:47,334 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.8 pTM=0.34 ipTM=0.15 tol=5.5
2024-07-28 04:37:13,279 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=64.9 pTM=0.34 ipTM=0.15 tol=3.73
2024-07-28 04:37:39,215 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.2 pTM=0.336 ipTM=0.171 tol=6.27
2024-07-28 04:38:05,168 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.4 pTM=0.338 ipTM=0.151 tol=5.48
2024-07-28 04:38:31,151 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.2 pTM=0.341 ipTM=0.146 tol=5.24
2024-07-28 04:38:57,133 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.8 pTM=0.34 ipTM=0.145 tol=3.65
2024-07-28 04:39:23,196 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.9 pTM=0.339 ipTM=0.16 tol=5.97
2024-07-28 04:39:49,251 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.6 pTM=0.341 ipTM=0.179 tol=9.12
2024-07-28 04:40:15,293 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.4 pTM=0.341 ipTM=0.16 tol=6.12
2024-07-28 04:40:41,384 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.5 pTM=0.339 ipTM=0.133 tol=6.89
2024-07-28 04:41:07,468 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.9 pTM=0.342 ipTM=0.146 tol=5.46
2024-07-28 04:41:33,465 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.4 pTM=0.344 ipTM=0.165 tol=4.71
2024-07-28 04:41:59,499 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.8 pTM=0.343 ipTM=0.187 tol=4.38
2024-07-28 04:42:25,518 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65.5 pTM=0.341 ipTM=0.167 tol=11.2
2024-07-28 04:42:51,606 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.1 pTM=0.345 ipTM=0.144 tol=7.97
2024-07-28 04:43:17,652 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.9 pTM=0.345 ipTM=0.146 tol=7.48
2024-07-28 04:43:43,728 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.8 pTM=0.342 ipTM=0.15 tol=4.52
2024-07-28 04:44:09,771 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.9 pTM=0.344 ipTM=0.141 tol=7.45
2024-07-28 04:44:35,862 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.8 pTM=0.343 ipTM=0.135 tol=6.09
2024-07-28 04:44:35,863 alphafold2_multimer_v3_model_3_seed_000 took 806.3s (30 recycles)
2024-07-28 04:45:02,569 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.9 pTM=0.329 ipTM=0.169
2024-07-28 04:45:28,569 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.4 pTM=0.335 ipTM=0.136 tol=17.4
2024-07-28 04:45:54,684 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.7 pTM=0.334 ipTM=0.153 tol=15.1
2024-07-28 04:46:20,682 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.3 pTM=0.337 ipTM=0.156 tol=7.89
2024-07-28 04:46:46,715 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.5 pTM=0.34 ipTM=0.148 tol=7.71
2024-07-28 04:47:12,721 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64 pTM=0.34 ipTM=0.148 tol=10.1
2024-07-28 04:47:38,726 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.9 pTM=0.341 ipTM=0.146 tol=6.7
2024-07-28 04:48:04,715 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.3 pTM=0.347 ipTM=0.147 tol=5.81
2024-07-28 04:48:30,728 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.2 pTM=0.347 ipTM=0.147 tol=4.92
2024-07-28 04:48:56,775 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.2 pTM=0.345 ipTM=0.141 tol=4.88
2024-07-28 04:49:22,826 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.9 pTM=0.342 ipTM=0.149 tol=4.38
2024-07-28 04:49:48,886 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.4 pTM=0.35 ipTM=0.144 tol=4.12
2024-07-28 04:50:14,916 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.1 pTM=0.347 ipTM=0.147 tol=5.55
2024-07-28 04:50:40,920 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.2 pTM=0.347 ipTM=0.146 tol=4.88
2024-07-28 04:51:06,928 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.7 pTM=0.343 ipTM=0.148 tol=3.9
2024-07-28 04:51:32,997 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.1 pTM=0.347 ipTM=0.144 tol=3.13
2024-07-28 04:51:59,032 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.1 pTM=0.344 ipTM=0.147 tol=5.44
2024-07-28 04:52:25,094 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.3 pTM=0.345 ipTM=0.146 tol=4.33
2024-07-28 04:52:51,087 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.8 pTM=0.344 ipTM=0.146 tol=3.11
2024-07-28 04:53:17,093 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.1 pTM=0.346 ipTM=0.14 tol=2.42
2024-07-28 04:53:43,144 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.2 pTM=0.338 ipTM=0.148 tol=4.93
2024-07-28 04:54:09,211 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.2 pTM=0.344 ipTM=0.15 tol=4.34
2024-07-28 04:54:35,244 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=63.9 pTM=0.345 ipTM=0.15 tol=6.46
2024-07-28 04:55:01,307 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.5 pTM=0.344 ipTM=0.146 tol=5.02
2024-07-28 04:55:27,323 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.1 pTM=0.34 ipTM=0.148 tol=4.98
2024-07-28 04:55:53,340 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.4 pTM=0.344 ipTM=0.151 tol=5.27
2024-07-28 04:56:19,356 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.3 pTM=0.343 ipTM=0.152 tol=3.43
2024-07-28 04:56:45,368 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.2 pTM=0.346 ipTM=0.145 tol=5.95
2024-07-28 04:57:11,446 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.8 pTM=0.341 ipTM=0.15 tol=4.21
2024-07-28 04:57:37,549 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.1 pTM=0.344 ipTM=0.143 tol=4.87
2024-07-28 04:58:03,619 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.8 pTM=0.34 ipTM=0.145 tol=5.57
2024-07-28 04:58:03,620 alphafold2_multimer_v3_model_4_seed_000 took 807.0s (30 recycles)
2024-07-28 04:58:30,449 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.4 pTM=0.319 ipTM=0.144
2024-07-28 04:58:56,531 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.1 pTM=0.324 ipTM=0.149 tol=25.5
2024-07-28 04:59:22,583 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.2 pTM=0.333 ipTM=0.15 tol=5.56
2024-07-28 04:59:48,692 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.4 pTM=0.333 ipTM=0.144 tol=10.1
2024-07-28 05:00:14,767 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.6 pTM=0.338 ipTM=0.146 tol=4.52
2024-07-28 05:00:40,760 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.7 pTM=0.341 ipTM=0.143 tol=6.2
2024-07-28 05:01:06,768 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.8 pTM=0.34 ipTM=0.141 tol=6.87
2024-07-28 05:01:32,772 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.1 pTM=0.344 ipTM=0.137 tol=9.09
2024-07-28 05:01:58,815 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63 pTM=0.344 ipTM=0.14 tol=5.74
2024-07-28 05:02:24,839 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.3 pTM=0.342 ipTM=0.135 tol=8.96
2024-07-28 05:02:50,834 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.7 pTM=0.353 ipTM=0.152 tol=5.21
2024-07-28 05:03:16,812 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=64.2 pTM=0.35 ipTM=0.142 tol=4.21
2024-07-28 05:03:42,930 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.8 pTM=0.35 ipTM=0.142 tol=5.05
2024-07-28 05:04:09,041 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.8 pTM=0.343 ipTM=0.143 tol=4.74
2024-07-28 05:04:35,146 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.6 pTM=0.343 ipTM=0.142 tol=4
2024-07-28 05:05:01,320 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.7 pTM=0.347 ipTM=0.142 tol=3.13
2024-07-28 05:05:27,471 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.1 pTM=0.346 ipTM=0.14 tol=2.51
2024-07-28 05:05:53,623 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64 pTM=0.348 ipTM=0.145 tol=2.08
2024-07-28 05:06:19,738 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.8 pTM=0.357 ipTM=0.146 tol=4.19
2024-07-28 05:06:45,844 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.7 pTM=0.359 ipTM=0.143 tol=3.65
2024-07-28 05:07:11,971 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.3 pTM=0.369 ipTM=0.145 tol=3.94
2024-07-28 05:07:38,096 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.2 pTM=0.366 ipTM=0.146 tol=5.75
2024-07-28 05:08:04,176 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.2 pTM=0.369 ipTM=0.144 tol=5.38
2024-07-28 05:08:30,278 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.6 pTM=0.374 ipTM=0.143 tol=4.74
2024-07-28 05:08:56,338 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.3 pTM=0.367 ipTM=0.146 tol=3.47
2024-07-28 05:09:22,413 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.3 pTM=0.37 ipTM=0.144 tol=2.44
2024-07-28 05:09:48,509 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.4 pTM=0.368 ipTM=0.146 tol=5.13
2024-07-28 05:10:14,615 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.4 pTM=0.368 ipTM=0.146 tol=4.79
2024-07-28 05:10:40,707 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64.1 pTM=0.365 ipTM=0.143 tol=1.65
2024-07-28 05:11:06,785 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.2 pTM=0.371 ipTM=0.145 tol=2.42
2024-07-28 05:11:32,878 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=64.5 pTM=0.368 ipTM=0.144 tol=9.05
2024-07-28 05:11:32,878 alphafold2_multimer_v3_model_5_seed_000 took 808.6s (30 recycles)
2024-07-28 05:11:33,583 reranking models by 'multimer' metric
2024-07-28 05:11:36,788 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 05:13:02,922 Relaxation took 89.3s
2024-07-28 05:13:02,922 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.8 pTM=0.313 ipTM=0.21
2024-07-28 05:14:24,214 Relaxation took 81.3s
2024-07-28 05:14:24,215 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=64.5 pTM=0.368 ipTM=0.144
2024-07-28 05:28:57,253 Relaxation took 873.0s
2024-07-28 05:28:57,254 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.8 pTM=0.34 ipTM=0.145
2024-07-28 05:30:16,223 Relaxation took 79.0s
2024-07-28 05:30:16,223 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.8 pTM=0.343 ipTM=0.135
2024-07-28 05:32:15,326 Relaxation took 119.1s
2024-07-28 05:32:15,326 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.7 pTM=0.332 ipTM=0.132
2024-07-28 05:32:17,636 Done