2024-07-28 05:00:55,150 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 05:00:55,464 Running on GPU
2024-07-28 05:00:58,816 Found 6 citations for tools or databases
2024-07-28 05:00:58,816 Query 1/1: TULP3_BTBD1 (length 984)
2024-07-28 05:00:59,275 Sleeping for 8s. Reason: PENDING
2024-07-28 05:01:07,693 Sleeping for 9s. Reason: RUNNING
2024-07-28 05:01:17,125 Sleeping for 8s. Reason: RUNNING
2024-07-28 05:01:25,563 Sleeping for 7s. Reason: RUNNING
2024-07-28 05:01:32,992 Sleeping for 8s. Reason: RUNNING
2024-07-28 05:01:41,423 Sleeping for 7s. Reason: RUNNING
2024-07-28 05:01:48,838 Sleeping for 7s. Reason: RUNNING
2024-07-28 05:01:56,257 Sleeping for 10s. Reason: RUNNING
2024-07-28 05:02:08,533 Sleeping for 8s. Reason: PENDING
2024-07-28 05:02:16,953 Sleeping for 10s. Reason: RUNNING
2024-07-28 05:02:27,373 Sleeping for 10s. Reason: RUNNING
2024-07-28 05:02:37,803 Sleeping for 9s. Reason: RUNNING
2024-07-28 05:02:47,243 Sleeping for 9s. Reason: RUNNING
2024-07-28 05:02:59,801 Setting max_seq=508, max_extra_seq=2048
2024-07-28 05:05:32,398 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.9 pTM=0.354 ipTM=0.312
2024-07-28 05:05:51,809 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.3 pTM=0.348 ipTM=0.2 tol=12.5
2024-07-28 05:06:11,252 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.3 pTM=0.479 ipTM=0.418 tol=19.3
2024-07-28 05:06:30,776 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63 pTM=0.351 ipTM=0.177 tol=13
2024-07-28 05:06:50,316 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.8 pTM=0.356 ipTM=0.182 tol=9.13
2024-07-28 05:07:09,855 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63 pTM=0.392 ipTM=0.264 tol=5.19
2024-07-28 05:07:29,455 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63.4 pTM=0.352 ipTM=0.162 tol=5.07
2024-07-28 05:07:49,033 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.4 pTM=0.354 ipTM=0.163 tol=5.44
2024-07-28 05:08:08,634 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.1 pTM=0.352 ipTM=0.152 tol=4.26
2024-07-28 05:08:28,236 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62 pTM=0.353 ipTM=0.158 tol=3.83
2024-07-28 05:08:47,846 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.7 pTM=0.365 ipTM=0.21 tol=5.96
2024-07-28 05:09:07,463 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.8 pTM=0.354 ipTM=0.16 tol=3.34
2024-07-28 05:09:27,078 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.7 pTM=0.351 ipTM=0.153 tol=10.5
2024-07-28 05:09:46,708 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.9 pTM=0.348 ipTM=0.19 tol=6.68
2024-07-28 05:10:06,319 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62 pTM=0.352 ipTM=0.174 tol=5.01
2024-07-28 05:10:25,977 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.2 pTM=0.35 ipTM=0.148 tol=4.33
2024-07-28 05:10:45,582 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.9 pTM=0.35 ipTM=0.168 tol=4.8
2024-07-28 05:11:05,195 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.8 pTM=0.35 ipTM=0.219 tol=6.16
2024-07-28 05:11:24,842 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.2 pTM=0.352 ipTM=0.182 tol=5.23
2024-07-28 05:11:44,472 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.4 pTM=0.347 ipTM=0.212 tol=5.79
2024-07-28 05:12:04,085 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.1 pTM=0.351 ipTM=0.218 tol=3.9
2024-07-28 05:12:23,702 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62 pTM=0.348 ipTM=0.19 tol=3.87
2024-07-28 05:12:43,330 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.2 pTM=0.352 ipTM=0.17 tol=3.87
2024-07-28 05:13:02,967 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.5 pTM=0.348 ipTM=0.185 tol=3.84
2024-07-28 05:13:22,574 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.5 pTM=0.355 ipTM=0.179 tol=8.17
2024-07-28 05:13:42,190 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62 pTM=0.403 ipTM=0.315 tol=13
2024-07-28 05:14:01,841 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63.1 pTM=0.348 ipTM=0.145 tol=7.79
2024-07-28 05:14:21,474 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.5 pTM=0.348 ipTM=0.152 tol=6.9
2024-07-28 05:14:41,119 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.7 pTM=0.351 ipTM=0.154 tol=11.1
2024-07-28 05:15:00,731 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.9 pTM=0.349 ipTM=0.165 tol=6.48
2024-07-28 05:15:20,354 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.8 pTM=0.351 ipTM=0.225 tol=6.33
2024-07-28 05:15:20,355 alphafold2_multimer_v3_model_1_seed_000 took 735.6s (30 recycles)
2024-07-28 05:15:40,534 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.3 pTM=0.362 ipTM=0.183
2024-07-28 05:16:00,071 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.2 pTM=0.54 ipTM=0.493 tol=22.4
2024-07-28 05:16:19,737 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=64.9 pTM=0.351 ipTM=0.138 tol=15.9
2024-07-28 05:16:39,357 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.4 pTM=0.352 ipTM=0.139 tol=14.8
2024-07-28 05:16:58,976 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.7 pTM=0.353 ipTM=0.158 tol=9.59
2024-07-28 05:17:18,602 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.9 pTM=0.352 ipTM=0.148 tol=4.9
2024-07-28 05:17:38,229 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.1 pTM=0.351 ipTM=0.154 tol=3.05
2024-07-28 05:17:57,838 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.9 pTM=0.353 ipTM=0.152 tol=4.34
2024-07-28 05:18:17,443 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.2 pTM=0.351 ipTM=0.155 tol=3
2024-07-28 05:18:37,052 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.1 pTM=0.351 ipTM=0.152 tol=1.94
2024-07-28 05:18:56,671 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.2 pTM=0.35 ipTM=0.15 tol=1.65
2024-07-28 05:19:16,275 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65 pTM=0.351 ipTM=0.155 tol=1.78
2024-07-28 05:19:35,881 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65 pTM=0.351 ipTM=0.159 tol=1.97
2024-07-28 05:19:55,501 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.1 pTM=0.353 ipTM=0.151 tol=2.75
2024-07-28 05:20:15,134 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.9 pTM=0.353 ipTM=0.156 tol=1.72
2024-07-28 05:20:34,777 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.2 pTM=0.354 ipTM=0.154 tol=4
2024-07-28 05:20:54,419 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.2 pTM=0.356 ipTM=0.16 tol=7.12
2024-07-28 05:21:14,063 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.2 pTM=0.362 ipTM=0.161 tol=2.14
2024-07-28 05:21:33,699 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.2 pTM=0.361 ipTM=0.165 tol=2.17
2024-07-28 05:21:53,357 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.1 pTM=0.358 ipTM=0.162 tol=2.55
2024-07-28 05:22:12,998 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.2 pTM=0.36 ipTM=0.165 tol=2.21
2024-07-28 05:22:32,609 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.9 pTM=0.36 ipTM=0.164 tol=2.29
2024-07-28 05:22:52,243 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.2 pTM=0.361 ipTM=0.167 tol=1.27
2024-07-28 05:23:11,883 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.2 pTM=0.364 ipTM=0.167 tol=1.56
2024-07-28 05:23:31,525 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.1 pTM=0.365 ipTM=0.166 tol=1.78
2024-07-28 05:23:51,175 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65 pTM=0.361 ipTM=0.167 tol=1.31
2024-07-28 05:24:10,822 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.8 pTM=0.359 ipTM=0.166 tol=1.75
2024-07-28 05:24:30,456 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.1 pTM=0.361 ipTM=0.17 tol=2.68
2024-07-28 05:24:50,088 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.2 pTM=0.357 ipTM=0.172 tol=1.26
2024-07-28 05:25:09,715 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65 pTM=0.357 ipTM=0.171 tol=1.37
2024-07-28 05:25:29,337 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.8 pTM=0.357 ipTM=0.164 tol=2.86
2024-07-28 05:25:29,338 alphafold2_multimer_v3_model_2_seed_000 took 608.4s (30 recycles)
2024-07-28 05:25:49,541 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.9 pTM=0.353 ipTM=0.24
2024-07-28 05:26:09,173 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.4 pTM=0.356 ipTM=0.142 tol=13.9
2024-07-28 05:26:28,725 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.2 pTM=0.532 ipTM=0.487 tol=20.7
2024-07-28 05:26:48,409 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.7 pTM=0.354 ipTM=0.129 tol=13
2024-07-28 05:27:08,099 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.1 pTM=0.351 ipTM=0.148 tol=13.7
2024-07-28 05:27:27,686 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.6 pTM=0.458 ipTM=0.367 tol=16.5
2024-07-28 05:27:47,335 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.3 pTM=0.359 ipTM=0.14 tol=12.2
2024-07-28 05:28:06,940 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.9 pTM=0.503 ipTM=0.444 tol=13.1
2024-07-28 05:28:26,616 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.4 pTM=0.363 ipTM=0.132 tol=10.8
2024-07-28 05:28:46,362 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.2 pTM=0.365 ipTM=0.137 tol=20
2024-07-28 05:29:06,123 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.2 pTM=0.353 ipTM=0.132 tol=7.27
2024-07-28 05:29:25,726 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.7 pTM=0.522 ipTM=0.469 tol=25.2
2024-07-28 05:29:45,428 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.6 pTM=0.37 ipTM=0.126 tol=15.6
2024-07-28 05:30:05,175 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.2 pTM=0.368 ipTM=0.138 tol=20.8
2024-07-28 05:30:24,904 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65 pTM=0.37 ipTM=0.143 tol=7.58
2024-07-28 05:30:44,533 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.9 pTM=0.446 ipTM=0.354 tol=28.6
2024-07-28 05:31:04,200 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65 pTM=0.385 ipTM=0.172 tol=7.3
2024-07-28 05:31:23,761 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62 pTM=0.511 ipTM=0.449 tol=8.68
2024-07-28 05:31:43,456 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.4 pTM=0.375 ipTM=0.13 tol=19.7
2024-07-28 05:32:03,023 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.7 pTM=0.519 ipTM=0.454 tol=17.3
2024-07-28 05:32:22,696 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.3 pTM=0.381 ipTM=0.13 tol=13.6
2024-07-28 05:32:42,422 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.1 pTM=0.375 ipTM=0.124 tol=18.9
2024-07-28 05:33:02,028 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.3 pTM=0.501 ipTM=0.44 tol=21.6
2024-07-28 05:33:21,707 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.4 pTM=0.37 ipTM=0.128 tol=13.7
2024-07-28 05:33:41,405 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.1 pTM=0.369 ipTM=0.139 tol=21.2
2024-07-28 05:34:01,121 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=65 pTM=0.361 ipTM=0.141 tol=4.85
2024-07-28 05:34:20,706 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.4 pTM=0.49 ipTM=0.418 tol=27.8
2024-07-28 05:34:40,406 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65 pTM=0.366 ipTM=0.128 tol=19.5
2024-07-28 05:35:00,121 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.9 pTM=0.365 ipTM=0.14 tol=19
2024-07-28 05:35:19,717 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.7 pTM=0.512 ipTM=0.457 tol=29.3
2024-07-28 05:35:39,420 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.5 pTM=0.368 ipTM=0.123 tol=17.2
2024-07-28 05:35:39,421 alphafold2_multimer_v3_model_3_seed_000 took 609.5s (30 recycles)
2024-07-28 05:35:59,590 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=62.8 pTM=0.384 ipTM=0.259
2024-07-28 05:36:19,212 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.9 pTM=0.363 ipTM=0.155 tol=14.4
2024-07-28 05:36:38,816 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.3 pTM=0.552 ipTM=0.515 tol=22.8
2024-07-28 05:36:58,480 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.9 pTM=0.362 ipTM=0.161 tol=17.5
2024-07-28 05:37:18,128 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.3 pTM=0.357 ipTM=0.154 tol=11
2024-07-28 05:37:37,779 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64 pTM=0.363 ipTM=0.183 tol=12.1
2024-07-28 05:37:57,387 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.7 pTM=0.494 ipTM=0.428 tol=19.4
2024-07-28 05:38:17,018 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.4 pTM=0.362 ipTM=0.155 tol=14
2024-07-28 05:38:36,650 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.2 pTM=0.359 ipTM=0.159 tol=12.2
2024-07-28 05:38:56,246 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.6 pTM=0.455 ipTM=0.379 tol=14.3
2024-07-28 05:39:15,861 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.1 pTM=0.369 ipTM=0.172 tol=10.6
2024-07-28 05:39:35,491 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.9 pTM=0.372 ipTM=0.166 tol=9.59
2024-07-28 05:39:55,088 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.1 pTM=0.428 ipTM=0.333 tol=11.7
2024-07-28 05:40:14,685 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.2 pTM=0.418 ipTM=0.274 tol=10.6
2024-07-28 05:40:34,356 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.1 pTM=0.374 ipTM=0.171 tol=12.2
2024-07-28 05:40:53,993 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.8 pTM=0.373 ipTM=0.175 tol=8.43
2024-07-28 05:41:13,585 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61 pTM=0.511 ipTM=0.446 tol=21.1
2024-07-28 05:41:33,258 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.1 pTM=0.366 ipTM=0.166 tol=14.4
2024-07-28 05:41:52,910 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.6 pTM=0.361 ipTM=0.159 tol=10.6
2024-07-28 05:42:12,571 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.5 pTM=0.359 ipTM=0.156 tol=7.4
2024-07-28 05:42:32,214 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.4 pTM=0.497 ipTM=0.43 tol=18
2024-07-28 05:42:51,857 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.9 pTM=0.369 ipTM=0.183 tol=13.5
2024-07-28 05:43:11,487 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.6 pTM=0.368 ipTM=0.169 tol=9.79
2024-07-28 05:43:31,141 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.2 pTM=0.36 ipTM=0.155 tol=9.56
2024-07-28 05:43:50,779 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=59.8 pTM=0.481 ipTM=0.403 tol=20.5
2024-07-28 05:44:10,421 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.4 pTM=0.359 ipTM=0.151 tol=13.9
2024-07-28 05:44:30,084 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.5 pTM=0.357 ipTM=0.145 tol=16
2024-07-28 05:44:49,744 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.6 pTM=0.36 ipTM=0.162 tol=9.52
2024-07-28 05:45:09,393 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.6 pTM=0.36 ipTM=0.16 tol=9.09
2024-07-28 05:45:29,007 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.1 pTM=0.498 ipTM=0.428 tol=22.9
2024-07-28 05:45:48,636 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64 pTM=0.367 ipTM=0.164 tol=13.2
2024-07-28 05:45:48,637 alphafold2_multimer_v3_model_4_seed_000 took 608.6s (30 recycles)
2024-07-28 05:46:08,905 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.7 pTM=0.355 ipTM=0.167
2024-07-28 05:46:28,576 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.6 pTM=0.367 ipTM=0.149 tol=18.3
2024-07-28 05:46:48,156 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.4 pTM=0.54 ipTM=0.496 tol=14.6
2024-07-28 05:47:07,851 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.5 pTM=0.366 ipTM=0.151 tol=13
2024-07-28 05:47:27,486 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.8 pTM=0.458 ipTM=0.37 tol=11
2024-07-28 05:47:47,142 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66 pTM=0.372 ipTM=0.148 tol=8.57
2024-07-28 05:48:06,801 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.4 pTM=0.384 ipTM=0.184 tol=9.34
2024-07-28 05:48:26,405 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.1 pTM=0.5 ipTM=0.427 tol=13.4
2024-07-28 05:48:46,072 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.2 pTM=0.379 ipTM=0.155 tol=9.89
2024-07-28 05:49:05,740 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66 pTM=0.383 ipTM=0.151 tol=11.6
2024-07-28 05:49:25,361 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.6 pTM=0.54 ipTM=0.489 tol=10.4
2024-07-28 05:49:45,028 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.1 pTM=0.379 ipTM=0.166 tol=8.3
2024-07-28 05:50:04,629 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.7 pTM=0.524 ipTM=0.469 tol=9.44
2024-07-28 05:50:24,284 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.2 pTM=0.383 ipTM=0.154 tol=8.98
2024-07-28 05:50:43,911 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.3 pTM=0.4 ipTM=0.232 tol=8.54
2024-07-28 05:51:03,486 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.2 pTM=0.473 ipTM=0.373 tol=6.66
2024-07-28 05:51:23,146 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.9 pTM=0.383 ipTM=0.171 tol=9.21
2024-07-28 05:51:42,822 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.6 pTM=0.372 ipTM=0.152 tol=8.16
2024-07-28 05:52:02,451 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.3 pTM=0.468 ipTM=0.382 tol=8.94
2024-07-28 05:52:22,115 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.2 pTM=0.375 ipTM=0.153 tol=5.58
2024-07-28 05:52:41,772 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.6 pTM=0.374 ipTM=0.153 tol=6.29
2024-07-28 05:53:01,383 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.5 pTM=0.53 ipTM=0.479 tol=10
2024-07-28 05:53:21,066 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.9 pTM=0.383 ipTM=0.164 tol=7
2024-07-28 05:53:40,688 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64 pTM=0.478 ipTM=0.39 tol=8.34
2024-07-28 05:54:00,353 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.9 pTM=0.38 ipTM=0.156 tol=7.68
2024-07-28 05:54:20,002 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.1 pTM=0.396 ipTM=0.233 tol=5.9
2024-07-28 05:54:39,635 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.9 pTM=0.398 ipTM=0.244 tol=5.95
2024-07-28 05:54:59,257 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.8 pTM=0.434 ipTM=0.302 tol=4.29
2024-07-28 05:55:18,938 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.7 pTM=0.375 ipTM=0.159 tol=6.67
2024-07-28 05:55:38,536 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.7 pTM=0.521 ipTM=0.468 tol=6.21
2024-07-28 05:55:58,205 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.9 pTM=0.38 ipTM=0.159 tol=6.35
2024-07-28 05:55:58,206 alphafold2_multimer_v3_model_5_seed_000 took 609.0s (30 recycles)
2024-07-28 05:55:58,806 reranking models by 'multimer' metric
2024-07-28 05:56:01,025 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 05:57:43,003 Relaxation took 104.2s
2024-07-28 05:57:43,003 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.8 pTM=0.351 ipTM=0.225
2024-07-28 05:59:49,814 Relaxation took 126.8s
2024-07-28 05:59:49,814 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64 pTM=0.367 ipTM=0.164
2024-07-28 06:00:44,168 Relaxation took 54.4s
2024-07-28 06:00:44,168 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.9 pTM=0.38 ipTM=0.159
2024-07-28 06:02:26,251 Relaxation took 102.1s
2024-07-28 06:02:26,252 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.8 pTM=0.357 ipTM=0.164
2024-07-28 06:03:41,275 Relaxation took 75.0s
2024-07-28 06:03:41,275 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.5 pTM=0.368 ipTM=0.123
2024-07-28 06:03:43,125 Done