2024-07-28 05:31:00,920 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 05:31:01,232 Running on GPU 2024-07-28 05:31:02,073 Found 6 citations for tools or databases 2024-07-28 05:31:02,073 Query 1/1: TULP3_FBXL19 (length 1196) 2024-07-28 05:31:02,481 Sleeping for 10s. Reason: PENDING 2024-07-28 05:31:12,904 Sleeping for 8s. Reason: RUNNING 2024-07-28 05:31:21,347 Sleeping for 8s. Reason: RUNNING 2024-07-28 05:31:29,777 Sleeping for 9s. Reason: RUNNING 2024-07-28 05:31:39,203 Sleeping for 10s. Reason: RUNNING 2024-07-28 05:31:49,628 Sleeping for 7s. Reason: RUNNING 2024-07-28 05:31:57,067 Sleeping for 6s. Reason: RUNNING 2024-07-28 05:32:05,159 Sleeping for 8s. Reason: PENDING 2024-07-28 05:32:13,607 Sleeping for 6s. Reason: RUNNING 2024-07-28 05:32:20,035 Sleeping for 8s. Reason: RUNNING 2024-07-28 05:32:28,493 Sleeping for 5s. Reason: RUNNING 2024-07-28 05:32:33,903 Sleeping for 7s. Reason: RUNNING 2024-07-28 05:32:41,327 Sleeping for 8s. Reason: RUNNING 2024-07-28 05:32:49,756 Sleeping for 7s. Reason: RUNNING 2024-07-28 05:33:00,502 Setting max_seq=508, max_extra_seq=2048 2024-07-28 05:36:03,444 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.8 pTM=0.35 ipTM=0.191 2024-07-28 05:36:38,019 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52 pTM=0.346 ipTM=0.196 tol=13.9 2024-07-28 05:37:12,781 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52 pTM=0.341 ipTM=0.18 tol=14.6 2024-07-28 05:37:47,637 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.3 pTM=0.341 ipTM=0.177 tol=8.25 2024-07-28 05:38:22,617 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.9 pTM=0.342 ipTM=0.215 tol=7.11 2024-07-28 05:38:57,604 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.8 pTM=0.344 ipTM=0.188 tol=6.41 2024-07-28 05:39:32,616 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.9 pTM=0.341 ipTM=0.184 tol=5.14 2024-07-28 05:40:07,628 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.8 pTM=0.344 ipTM=0.187 tol=6.64 2024-07-28 05:40:42,658 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.1 pTM=0.342 ipTM=0.21 tol=6.55 2024-07-28 05:41:17,727 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.2 pTM=0.341 ipTM=0.18 tol=4.24 2024-07-28 05:41:52,813 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.8 pTM=0.338 ipTM=0.185 tol=4.53 2024-07-28 05:42:27,886 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.8 pTM=0.34 ipTM=0.18 tol=3.73 2024-07-28 05:43:02,956 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.8 pTM=0.34 ipTM=0.182 tol=5.43 2024-07-28 05:43:38,042 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.7 pTM=0.34 ipTM=0.18 tol=2.72 2024-07-28 05:44:13,127 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.7 pTM=0.342 ipTM=0.185 tol=3.33 2024-07-28 05:44:48,243 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.7 pTM=0.347 ipTM=0.197 tol=3.79 2024-07-28 05:45:23,346 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.9 pTM=0.344 ipTM=0.192 tol=4.81 2024-07-28 05:45:58,453 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.3 pTM=0.349 ipTM=0.2 tol=4.59 2024-07-28 05:46:33,549 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53.4 pTM=0.347 ipTM=0.214 tol=4.16 2024-07-28 05:47:08,679 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.6 pTM=0.347 ipTM=0.2 tol=2.56 2024-07-28 05:47:43,767 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.6 pTM=0.347 ipTM=0.21 tol=3.32 2024-07-28 05:48:18,851 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.8 pTM=0.351 ipTM=0.36 tol=5.7 2024-07-28 05:48:53,947 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=53.5 pTM=0.349 ipTM=0.211 tol=3.67 2024-07-28 05:49:29,004 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.6 pTM=0.346 ipTM=0.205 tol=3.3 2024-07-28 05:50:04,079 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.6 pTM=0.346 ipTM=0.199 tol=2.23 2024-07-28 05:50:39,136 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.8 pTM=0.352 ipTM=0.233 tol=4.66 2024-07-28 05:51:14,212 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53.7 pTM=0.352 ipTM=0.327 tol=7.08 2024-07-28 05:51:49,279 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.8 pTM=0.345 ipTM=0.198 tol=6.79 2024-07-28 05:52:24,363 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.7 pTM=0.345 ipTM=0.193 tol=5.04 2024-07-28 05:52:59,445 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.8 pTM=0.343 ipTM=0.191 tol=3.86 2024-07-28 05:53:34,518 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.5 pTM=0.346 ipTM=0.198 tol=3.29 2024-07-28 05:53:34,519 alphafold2_multimer_v3_model_1_seed_000 took 1229.6s (30 recycles) 2024-07-28 05:54:10,492 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52 pTM=0.338 ipTM=0.155 2024-07-28 05:54:45,669 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.4 pTM=0.339 ipTM=0.175 tol=20.2 2024-07-28 05:55:20,869 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.2 pTM=0.342 ipTM=0.2 tol=17.3 2024-07-28 05:55:56,071 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=54.2 pTM=0.345 ipTM=0.188 tol=9.88 2024-07-28 05:56:31,263 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.2 pTM=0.349 ipTM=0.238 tol=5.9 2024-07-28 05:57:06,442 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=54.2 pTM=0.347 ipTM=0.19 tol=4.68 2024-07-28 05:57:41,590 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.3 pTM=0.347 ipTM=0.318 tol=3.98 2024-07-28 05:58:16,760 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.5 pTM=0.35 ipTM=0.21 tol=4.19 2024-07-28 05:58:51,943 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=54.8 pTM=0.347 ipTM=0.217 tol=2.71 2024-07-28 05:59:27,119 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.7 pTM=0.347 ipTM=0.185 tol=2.64 2024-07-28 06:00:02,315 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=54.9 pTM=0.349 ipTM=0.215 tol=2.2 2024-07-28 06:00:37,504 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=54.8 pTM=0.349 ipTM=0.199 tol=2.05 2024-07-28 06:01:12,655 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.2 pTM=0.353 ipTM=0.295 tol=2.1 2024-07-28 06:01:47,818 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.9 pTM=0.347 ipTM=0.194 tol=2.5 2024-07-28 06:02:22,998 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55 pTM=0.349 ipTM=0.231 tol=2.28 2024-07-28 06:02:58,216 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.8 pTM=0.346 ipTM=0.197 tol=2 2024-07-28 06:03:33,363 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.9 pTM=0.347 ipTM=0.221 tol=3.07 2024-07-28 06:04:08,540 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.7 pTM=0.348 ipTM=0.188 tol=2.78 2024-07-28 06:04:43,728 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.2 pTM=0.352 ipTM=0.233 tol=2.69 2024-07-28 06:05:18,891 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.2 pTM=0.354 ipTM=0.338 tol=5.02 2024-07-28 06:05:54,072 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.9 pTM=0.349 ipTM=0.213 tol=5.2 2024-07-28 06:06:29,234 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.8 pTM=0.347 ipTM=0.264 tol=2.6 2024-07-28 06:07:04,357 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.8 pTM=0.349 ipTM=0.208 tol=3 2024-07-28 06:07:39,491 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.1 pTM=0.352 ipTM=0.305 tol=2.95 2024-07-28 06:08:14,625 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55 pTM=0.346 ipTM=0.197 tol=2.42 2024-07-28 06:08:49,732 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.1 pTM=0.351 ipTM=0.254 tol=2.38 2024-07-28 06:09:24,855 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.9 pTM=0.348 ipTM=0.191 tol=2.6 2024-07-28 06:09:59,993 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.2 pTM=0.353 ipTM=0.321 tol=3.98 2024-07-28 06:10:35,138 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.1 pTM=0.353 ipTM=0.216 tol=4.74 2024-07-28 06:11:10,293 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.1 pTM=0.35 ipTM=0.241 tol=5.27 2024-07-28 06:11:45,460 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.9 pTM=0.352 ipTM=0.213 tol=3.18 2024-07-28 06:11:45,461 alphafold2_multimer_v3_model_2_seed_000 took 1090.1s (30 recycles) 2024-07-28 06:12:21,557 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.3 pTM=0.352 ipTM=0.196 2024-07-28 06:12:56,827 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=52.1 pTM=0.351 ipTM=0.211 tol=18.8 2024-07-28 06:13:32,148 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=52 pTM=0.339 ipTM=0.161 tol=12.4 2024-07-28 06:14:07,439 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.7 pTM=0.343 ipTM=0.167 tol=8.2 2024-07-28 06:14:42,682 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.7 pTM=0.343 ipTM=0.181 tol=7.86 2024-07-28 06:15:17,958 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.8 pTM=0.342 ipTM=0.169 tol=11.2 2024-07-28 06:15:53,200 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.1 pTM=0.35 ipTM=0.231 tol=15.7 2024-07-28 06:16:28,453 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.3 pTM=0.343 ipTM=0.361 tol=16.7 2024-07-28 06:17:03,713 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54 pTM=0.343 ipTM=0.192 tol=9.45 2024-07-28 06:17:39,023 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.9 pTM=0.346 ipTM=0.201 tol=9.3 2024-07-28 06:18:14,352 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.9 pTM=0.341 ipTM=0.169 tol=7.4 2024-07-28 06:18:49,615 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.2 pTM=0.343 ipTM=0.185 tol=4.45 2024-07-28 06:19:24,950 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.9 pTM=0.345 ipTM=0.18 tol=15.3 2024-07-28 06:20:00,294 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.1 pTM=0.341 ipTM=0.172 tol=11.6 2024-07-28 06:20:35,636 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54 pTM=0.345 ipTM=0.195 tol=11.5 2024-07-28 06:21:11,000 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.8 pTM=0.347 ipTM=0.218 tol=14.8 2024-07-28 06:21:46,340 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54 pTM=0.346 ipTM=0.191 tol=12.7 2024-07-28 06:22:21,715 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54 pTM=0.343 ipTM=0.228 tol=10.3 2024-07-28 06:22:57,056 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.5 pTM=0.35 ipTM=0.422 tol=10.3 2024-07-28 06:23:32,381 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.4 pTM=0.342 ipTM=0.26 tol=5.31 2024-07-28 06:24:07,733 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54 pTM=0.351 ipTM=0.302 tol=19.9 2024-07-28 06:24:43,091 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54 pTM=0.338 ipTM=0.168 tol=12.2 2024-07-28 06:25:18,361 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.3 pTM=0.345 ipTM=0.335 tol=8.68 2024-07-28 06:25:53,624 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.2 pTM=0.343 ipTM=0.216 tol=8.8 2024-07-28 06:26:28,849 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.3 pTM=0.346 ipTM=0.293 tol=4.47 2024-07-28 06:27:04,041 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.2 pTM=0.345 ipTM=0.205 tol=4.45 2024-07-28 06:27:39,249 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.2 pTM=0.348 ipTM=0.24 tol=4.96 2024-07-28 06:28:14,437 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.7 pTM=0.348 ipTM=0.368 tol=4.83 2024-07-28 06:28:49,654 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.4 pTM=0.345 ipTM=0.246 tol=4.16 2024-07-28 06:29:24,877 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.3 pTM=0.345 ipTM=0.241 tol=4.41 2024-07-28 06:30:00,036 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.3 pTM=0.345 ipTM=0.193 tol=5.73 2024-07-28 06:30:00,037 alphafold2_multimer_v3_model_3_seed_000 took 1093.7s (30 recycles) 2024-07-28 06:30:36,020 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=49.5 pTM=0.337 ipTM=0.209 2024-07-28 06:31:11,172 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=50.3 pTM=0.337 ipTM=0.173 tol=19.1 2024-07-28 06:31:46,297 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50 pTM=0.346 ipTM=0.225 tol=14.8 2024-07-28 06:32:21,431 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.2 pTM=0.372 ipTM=0.485 tol=13.2 2024-07-28 06:32:56,543 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53 pTM=0.416 ipTM=0.47 tol=9.95 2024-07-28 06:33:31,645 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.1 pTM=0.416 ipTM=0.48 tol=11.2 2024-07-28 06:34:06,789 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.5 pTM=0.398 ipTM=0.461 tol=4.95 2024-07-28 06:34:41,924 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.5 pTM=0.386 ipTM=0.463 tol=3.17 2024-07-28 06:35:17,062 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.4 pTM=0.442 ipTM=0.491 tol=3.05 2024-07-28 06:35:52,220 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.1 pTM=0.409 ipTM=0.474 tol=3.2 2024-07-28 06:36:27,370 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=53.4 pTM=0.438 ipTM=0.483 tol=2.93 2024-07-28 06:37:02,531 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=53.3 pTM=0.419 ipTM=0.481 tol=3.97 2024-07-28 06:37:37,700 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53.1 pTM=0.432 ipTM=0.481 tol=3.44 2024-07-28 06:38:12,862 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.3 pTM=0.427 ipTM=0.479 tol=2.91 2024-07-28 06:38:48,028 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=53.3 pTM=0.438 ipTM=0.484 tol=2.2 2024-07-28 06:39:23,181 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.8 pTM=0.447 ipTM=0.492 tol=2.03 2024-07-28 06:39:58,353 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=53.6 pTM=0.442 ipTM=0.491 tol=4.89 2024-07-28 06:40:33,506 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=53.1 pTM=0.423 ipTM=0.476 tol=5.55 2024-07-28 06:41:08,649 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=53.4 pTM=0.446 ipTM=0.483 tol=2.61 2024-07-28 06:41:43,800 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=53.7 pTM=0.436 ipTM=0.479 tol=2.8 2024-07-28 06:42:18,903 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=53.4 pTM=0.451 ipTM=0.486 tol=2.62 2024-07-28 06:42:53,967 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=53.5 pTM=0.44 ipTM=0.475 tol=2.53 2024-07-28 06:43:29,001 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=53.2 pTM=0.435 ipTM=0.477 tol=1.98 2024-07-28 06:44:04,037 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=53 pTM=0.415 ipTM=0.469 tol=1.85 2024-07-28 06:44:39,088 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=53.3 pTM=0.431 ipTM=0.484 tol=2.51 2024-07-28 06:45:14,168 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=53.3 pTM=0.42 ipTM=0.481 tol=2.73 2024-07-28 06:45:49,268 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.9 pTM=0.415 ipTM=0.482 tol=2.12 2024-07-28 06:46:24,372 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.2 pTM=0.418 ipTM=0.479 tol=3.97 2024-07-28 06:46:59,452 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=53 pTM=0.417 ipTM=0.482 tol=4.38 2024-07-28 06:47:34,527 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=53.5 pTM=0.421 ipTM=0.487 tol=4.34 2024-07-28 06:48:09,604 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=53.4 pTM=0.432 ipTM=0.499 tol=4.12 2024-07-28 06:48:09,605 alphafold2_multimer_v3_model_4_seed_000 took 1088.7s (30 recycles) 2024-07-28 06:48:45,655 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51 pTM=0.344 ipTM=0.179 2024-07-28 06:49:20,911 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.7 pTM=0.338 ipTM=0.196 tol=18.7 2024-07-28 06:49:56,222 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.4 pTM=0.334 ipTM=0.151 tol=11.9 2024-07-28 06:50:31,586 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.4 pTM=0.334 ipTM=0.156 tol=9.12 2024-07-28 06:51:06,972 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.8 pTM=0.334 ipTM=0.168 tol=9.52 2024-07-28 06:51:42,349 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.8 pTM=0.335 ipTM=0.18 tol=5.45 2024-07-28 06:52:17,739 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.1 pTM=0.333 ipTM=0.18 tol=5.57 2024-07-28 06:52:53,123 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.1 pTM=0.335 ipTM=0.157 tol=4.79 2024-07-28 06:53:28,486 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.2 pTM=0.337 ipTM=0.208 tol=7.13 2024-07-28 06:54:03,846 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.4 pTM=0.335 ipTM=0.201 tol=5.01 2024-07-28 06:54:39,221 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.6 pTM=0.337 ipTM=0.201 tol=3.66 2024-07-28 06:55:14,570 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.5 pTM=0.336 ipTM=0.196 tol=5.57 2024-07-28 06:55:49,938 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.5 pTM=0.338 ipTM=0.204 tol=3.29 2024-07-28 06:56:25,269 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.6 pTM=0.335 ipTM=0.185 tol=3.9 2024-07-28 06:57:00,615 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.5 pTM=0.337 ipTM=0.184 tol=5.23 2024-07-28 06:57:35,969 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.3 pTM=0.336 ipTM=0.19 tol=6.3 2024-07-28 06:58:11,305 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.4 pTM=0.335 ipTM=0.178 tol=5.95 2024-07-28 06:58:46,632 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.3 pTM=0.336 ipTM=0.164 tol=5.35 2024-07-28 06:59:21,971 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.4 pTM=0.335 ipTM=0.17 tol=6.44 2024-07-28 06:59:57,305 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.1 pTM=0.336 ipTM=0.162 tol=8.1 2024-07-28 07:00:32,652 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.3 pTM=0.336 ipTM=0.174 tol=7.02 2024-07-28 07:01:08,028 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.2 pTM=0.335 ipTM=0.169 tol=3.42 2024-07-28 07:01:43,338 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.2 pTM=0.338 ipTM=0.215 tol=6.27 2024-07-28 07:02:18,687 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.3 pTM=0.336 ipTM=0.202 tol=6.73 2024-07-28 07:02:54,038 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.4 pTM=0.335 ipTM=0.2 tol=6.5 2024-07-28 07:03:29,392 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.5 pTM=0.336 ipTM=0.206 tol=3.75 2024-07-28 07:04:04,732 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.2 pTM=0.336 ipTM=0.191 tol=8.27 2024-07-28 07:04:40,124 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.3 pTM=0.335 ipTM=0.183 tol=6.99 2024-07-28 07:05:15,486 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.1 pTM=0.34 ipTM=0.201 tol=6.53 2024-07-28 07:05:50,851 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.4 pTM=0.337 ipTM=0.193 tol=5.05 2024-07-28 07:06:26,216 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.3 pTM=0.337 ipTM=0.173 tol=3.62 2024-07-28 07:06:26,218 alphafold2_multimer_v3_model_5_seed_000 took 1095.7s (30 recycles) 2024-07-28 07:06:27,092 reranking models by 'multimer' metric 2024-07-28 07:06:30,394 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 07:09:03,171 Relaxation took 156.1s 2024-07-28 07:09:03,171 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=53.4 pTM=0.432 ipTM=0.499 2024-07-28 07:10:47,001 Relaxation took 103.8s 2024-07-28 07:10:47,001 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.9 pTM=0.352 ipTM=0.213 2024-07-28 07:12:54,262 Relaxation took 127.3s 2024-07-28 07:12:54,262 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.5 pTM=0.346 ipTM=0.198 2024-07-28 07:15:14,567 Relaxation took 140.3s 2024-07-28 07:15:14,567 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.3 pTM=0.345 ipTM=0.193 2024-07-28 07:17:11,038 Relaxation took 116.5s 2024-07-28 07:17:11,038 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.3 pTM=0.337 ipTM=0.173 2024-07-28 07:17:13,411 Done