2024-07-28 05:47:06,866 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 05:47:08,172 Running on GPU
2024-07-28 05:47:09,583 Found 6 citations for tools or databases
2024-07-28 05:47:09,584 Query 1/1: TULP3_KLHL18 (length 1076)
2024-07-28 05:47:10,033 Sleeping for 5s. Reason: PENDING
2024-07-28 05:47:15,449 Sleeping for 9s. Reason: RUNNING
2024-07-28 05:47:24,915 Sleeping for 7s. Reason: RUNNING
2024-07-28 05:47:32,354 Sleeping for 10s. Reason: RUNNING
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2024-07-28 05:48:00,663 Sleeping for 6s. Reason: RUNNING
2024-07-28 05:48:07,102 Sleeping for 10s. Reason: RUNNING
2024-07-28 05:48:17,542 Sleeping for 6s. Reason: RUNNING
2024-07-28 05:48:23,953 Sleeping for 5s. Reason: RUNNING
2024-07-28 05:48:29,398 Sleeping for 6s. Reason: RUNNING
2024-07-28 05:48:35,813 Sleeping for 5s. Reason: RUNNING
2024-07-28 05:48:41,258 Sleeping for 9s. Reason: RUNNING
2024-07-28 05:48:50,678 Sleeping for 7s. Reason: RUNNING
2024-07-28 05:48:58,106 Sleeping for 8s. Reason: RUNNING
2024-07-28 05:49:06,535 Sleeping for 9s. Reason: RUNNING
2024-07-28 05:49:15,967 Sleeping for 10s. Reason: RUNNING
2024-07-28 05:49:26,424 Sleeping for 6s. Reason: RUNNING
2024-07-28 05:49:32,859 Sleeping for 10s. Reason: RUNNING
2024-07-28 05:49:43,275 Sleeping for 6s. Reason: RUNNING
2024-07-28 05:49:49,688 Sleeping for 6s. Reason: RUNNING
2024-07-28 05:49:56,105 Sleeping for 8s. Reason: RUNNING
2024-07-28 05:50:06,467 Sleeping for 8s. Reason: PENDING
2024-07-28 05:50:14,894 Sleeping for 5s. Reason: RUNNING
2024-07-28 05:50:20,322 Sleeping for 7s. Reason: RUNNING
2024-07-28 05:50:27,769 Sleeping for 7s. Reason: RUNNING
2024-07-28 05:50:35,199 Sleeping for 10s. Reason: RUNNING
2024-07-28 05:50:45,627 Sleeping for 8s. Reason: RUNNING
2024-07-28 05:50:54,078 Sleeping for 8s. Reason: RUNNING
2024-07-28 05:51:02,490 Sleeping for 10s. Reason: RUNNING
2024-07-28 05:51:12,922 Sleeping for 5s. Reason: RUNNING
2024-07-28 05:51:18,374 Sleeping for 6s. Reason: RUNNING
2024-07-28 05:51:24,827 Sleeping for 9s. Reason: RUNNING
2024-07-28 05:51:39,845 Setting max_seq=508, max_extra_seq=2048
2024-07-28 05:55:22,859 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.2 pTM=0.394 ipTM=0.163
2024-07-28 05:55:53,128 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.9 pTM=0.399 ipTM=0.21 tol=11
2024-07-28 05:56:23,469 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.6 pTM=0.395 ipTM=0.226 tol=6.66
2024-07-28 05:56:53,869 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.7 pTM=0.397 ipTM=0.208 tol=4.75
2024-07-28 05:57:24,300 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.1 pTM=0.386 ipTM=0.21 tol=4.22
2024-07-28 05:57:54,765 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.6 pTM=0.394 ipTM=0.205 tol=4.01
2024-07-28 05:58:25,225 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.1 pTM=0.39 ipTM=0.193 tol=9.91
2024-07-28 05:58:55,707 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.6 pTM=0.388 ipTM=0.195 tol=3.88
2024-07-28 05:59:26,214 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.5 pTM=0.386 ipTM=0.199 tol=3.38
2024-07-28 05:59:56,708 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.9 pTM=0.393 ipTM=0.204 tol=2.42
2024-07-28 06:00:27,218 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.6 pTM=0.392 ipTM=0.21 tol=2.27
2024-07-28 06:00:57,708 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.4 pTM=0.387 ipTM=0.196 tol=1.84
2024-07-28 06:01:28,207 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.7 pTM=0.387 ipTM=0.204 tol=3.11
2024-07-28 06:01:58,685 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.8 pTM=0.386 ipTM=0.194 tol=2.07
2024-07-28 06:02:29,157 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.6 pTM=0.384 ipTM=0.204 tol=3.83
2024-07-28 06:02:59,628 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.1 pTM=0.387 ipTM=0.197 tol=3.01
2024-07-28 06:03:30,101 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.9 pTM=0.385 ipTM=0.211 tol=4.14
2024-07-28 06:04:00,584 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.2 pTM=0.389 ipTM=0.2 tol=3.93
2024-07-28 06:04:31,059 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.8 pTM=0.387 ipTM=0.208 tol=2.33
2024-07-28 06:05:01,539 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.1 pTM=0.384 ipTM=0.193 tol=2.98
2024-07-28 06:05:32,009 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.6 pTM=0.379 ipTM=0.198 tol=3.31
2024-07-28 06:06:02,483 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.2 pTM=0.378 ipTM=0.192 tol=3.36
2024-07-28 06:06:32,954 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.9 pTM=0.374 ipTM=0.199 tol=2.78
2024-07-28 06:07:03,463 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.6 pTM=0.38 ipTM=0.205 tol=3.43
2024-07-28 06:07:33,935 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69 pTM=0.378 ipTM=0.202 tol=5.91
2024-07-28 06:08:04,394 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.1 pTM=0.377 ipTM=0.202 tol=4.43
2024-07-28 06:08:34,862 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.9 pTM=0.375 ipTM=0.191 tol=5.96
2024-07-28 06:09:05,359 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.1 pTM=0.379 ipTM=0.192 tol=3.73
2024-07-28 06:09:35,857 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.9 pTM=0.379 ipTM=0.195 tol=3.63
2024-07-28 06:10:06,353 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.3 pTM=0.38 ipTM=0.202 tol=3.46
2024-07-28 06:10:36,847 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.1 pTM=0.379 ipTM=0.215 tol=2.27
2024-07-28 06:10:36,847 alphafold2_multimer_v3_model_1_seed_000 took 1116.2s (30 recycles)
2024-07-28 06:11:08,391 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.9 pTM=0.425 ipTM=0.218
2024-07-28 06:11:38,906 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.1 pTM=0.43 ipTM=0.198 tol=7.87
2024-07-28 06:12:09,459 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.6 pTM=0.396 ipTM=0.172 tol=8.14
2024-07-28 06:12:40,061 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.8 pTM=0.405 ipTM=0.157 tol=4.46
2024-07-28 06:13:10,684 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.9 pTM=0.391 ipTM=0.17 tol=13.5
2024-07-28 06:13:41,266 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.2 pTM=0.397 ipTM=0.221 tol=5.44
2024-07-28 06:14:11,846 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.4 pTM=0.396 ipTM=0.291 tol=3.5
2024-07-28 06:14:42,446 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.6 pTM=0.395 ipTM=0.312 tol=4.02
2024-07-28 06:15:13,049 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.8 pTM=0.391 ipTM=0.325 tol=3.96
2024-07-28 06:15:43,669 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.4 pTM=0.395 ipTM=0.334 tol=7.16
2024-07-28 06:16:14,265 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.9 pTM=0.393 ipTM=0.319 tol=3.95
2024-07-28 06:16:44,843 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.5 pTM=0.396 ipTM=0.332 tol=4.95
2024-07-28 06:17:15,418 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.9 pTM=0.393 ipTM=0.331 tol=4.96
2024-07-28 06:17:45,990 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.6 pTM=0.393 ipTM=0.344 tol=4.29
2024-07-28 06:18:16,563 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.7 pTM=0.391 ipTM=0.338 tol=3.71
2024-07-28 06:18:47,135 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.8 pTM=0.396 ipTM=0.355 tol=2.94
2024-07-28 06:19:17,687 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.1 pTM=0.393 ipTM=0.354 tol=3.59
2024-07-28 06:19:48,266 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.8 pTM=0.392 ipTM=0.342 tol=3.92
2024-07-28 06:20:18,810 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.7 pTM=0.393 ipTM=0.329 tol=2.52
2024-07-28 06:20:49,376 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.6 pTM=0.394 ipTM=0.328 tol=2.55
2024-07-28 06:21:19,918 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.6 pTM=0.394 ipTM=0.336 tol=3.95
2024-07-28 06:21:50,469 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.8 pTM=0.396 ipTM=0.329 tol=3.8
2024-07-28 06:22:21,014 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.6 pTM=0.392 ipTM=0.325 tol=2.25
2024-07-28 06:22:51,583 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.8 pTM=0.393 ipTM=0.31 tol=3.29
2024-07-28 06:23:22,131 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.8 pTM=0.392 ipTM=0.315 tol=4.37
2024-07-28 06:23:52,691 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70.7 pTM=0.396 ipTM=0.322 tol=3.38
2024-07-28 06:24:23,242 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.6 pTM=0.39 ipTM=0.326 tol=2.89
2024-07-28 06:24:53,806 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.7 pTM=0.396 ipTM=0.307 tol=2.84
2024-07-28 06:25:24,383 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.6 pTM=0.392 ipTM=0.296 tol=3.78
2024-07-28 06:25:54,960 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.4 pTM=0.398 ipTM=0.304 tol=5.87
2024-07-28 06:26:25,540 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.6 pTM=0.392 ipTM=0.318 tol=6.19
2024-07-28 06:26:25,541 alphafold2_multimer_v3_model_2_seed_000 took 947.7s (30 recycles)
2024-07-28 06:26:57,175 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=71.1 pTM=0.387 ipTM=0.175
2024-07-28 06:27:27,809 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.9 pTM=0.467 ipTM=0.257 tol=10.2
2024-07-28 06:27:58,452 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=71.6 pTM=0.448 ipTM=0.205 tol=16.4
2024-07-28 06:28:29,163 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.2 pTM=0.435 ipTM=0.208 tol=12.2
2024-07-28 06:28:59,878 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.8 pTM=0.429 ipTM=0.175 tol=3.84
2024-07-28 06:29:30,595 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.8 pTM=0.434 ipTM=0.18 tol=4.93
2024-07-28 06:30:01,288 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.8 pTM=0.421 ipTM=0.176 tol=4.27
2024-07-28 06:30:32,003 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.9 pTM=0.429 ipTM=0.188 tol=5.02
2024-07-28 06:31:02,712 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.8 pTM=0.42 ipTM=0.178 tol=3.13
2024-07-28 06:31:33,401 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.9 pTM=0.438 ipTM=0.21 tol=3.98
2024-07-28 06:32:04,132 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.8 pTM=0.413 ipTM=0.165 tol=6.41
2024-07-28 06:32:34,843 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.3 pTM=0.42 ipTM=0.186 tol=5.82
2024-07-28 06:33:05,574 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.8 pTM=0.408 ipTM=0.159 tol=4.72
2024-07-28 06:33:36,322 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.2 pTM=0.406 ipTM=0.16 tol=6.45
2024-07-28 06:34:07,023 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.9 pTM=0.41 ipTM=0.159 tol=13.1
2024-07-28 06:34:37,773 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.2 pTM=0.413 ipTM=0.165 tol=13.3
2024-07-28 06:35:08,513 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.8 pTM=0.415 ipTM=0.171 tol=5.04
2024-07-28 06:35:39,221 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.9 pTM=0.412 ipTM=0.173 tol=4.32
2024-07-28 06:36:09,922 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.4 pTM=0.418 ipTM=0.199 tol=3.64
2024-07-28 06:36:40,651 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.9 pTM=0.405 ipTM=0.157 tol=6.23
2024-07-28 06:37:11,388 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.5 pTM=0.418 ipTM=0.178 tol=6.17
2024-07-28 06:37:42,079 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.7 pTM=0.407 ipTM=0.143 tol=12
2024-07-28 06:38:12,801 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.4 pTM=0.414 ipTM=0.167 tol=10.2
2024-07-28 06:38:43,513 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.2 pTM=0.407 ipTM=0.146 tol=6.69
2024-07-28 06:39:14,217 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.5 pTM=0.413 ipTM=0.16 tol=6.34
2024-07-28 06:39:44,868 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.8 pTM=0.412 ipTM=0.167 tol=13.4
2024-07-28 06:40:15,559 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.7 pTM=0.411 ipTM=0.157 tol=8.99
2024-07-28 06:40:46,182 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.1 pTM=0.418 ipTM=0.192 tol=10.6
2024-07-28 06:41:16,862 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.8 pTM=0.411 ipTM=0.16 tol=8.48
2024-07-28 06:41:47,487 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71 pTM=0.414 ipTM=0.171 tol=7.34
2024-07-28 06:42:18,210 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.6 pTM=0.413 ipTM=0.162 tol=14.7
2024-07-28 06:42:18,211 alphafold2_multimer_v3_model_3_seed_000 took 951.6s (30 recycles)
2024-07-28 06:42:49,782 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=67.3 pTM=0.442 ipTM=0.229
2024-07-28 06:43:20,385 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.6 pTM=0.424 ipTM=0.171 tol=13.3
2024-07-28 06:43:51,035 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.5 pTM=0.398 ipTM=0.155 tol=6.98
2024-07-28 06:44:21,661 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.6 pTM=0.4 ipTM=0.155 tol=5.02
2024-07-28 06:44:52,283 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.4 pTM=0.394 ipTM=0.155 tol=4.79
2024-07-28 06:45:22,882 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.8 pTM=0.396 ipTM=0.154 tol=5.32
2024-07-28 06:45:53,494 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.4 pTM=0.398 ipTM=0.153 tol=3.99
2024-07-28 06:46:24,132 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.9 pTM=0.402 ipTM=0.151 tol=4.75
2024-07-28 06:46:54,763 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.7 pTM=0.406 ipTM=0.154 tol=3.33
2024-07-28 06:47:25,406 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.9 pTM=0.404 ipTM=0.151 tol=3.9
2024-07-28 06:47:56,048 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.8 pTM=0.406 ipTM=0.155 tol=2.22
2024-07-28 06:48:26,670 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.6 pTM=0.398 ipTM=0.154 tol=2.34
2024-07-28 06:48:57,300 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.9 pTM=0.408 ipTM=0.155 tol=3.03
2024-07-28 06:49:27,904 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.9 pTM=0.4 ipTM=0.156 tol=3.31
2024-07-28 06:49:58,495 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.1 pTM=0.416 ipTM=0.18 tol=4.28
2024-07-28 06:50:29,061 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.8 pTM=0.407 ipTM=0.194 tol=3.45
2024-07-28 06:50:59,650 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69 pTM=0.414 ipTM=0.198 tol=2.55
2024-07-28 06:51:30,213 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.9 pTM=0.408 ipTM=0.201 tol=3.44
2024-07-28 06:52:00,797 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.9 pTM=0.407 ipTM=0.198 tol=3.8
2024-07-28 06:52:31,381 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.8 pTM=0.411 ipTM=0.191 tol=7.16
2024-07-28 06:53:01,956 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.6 pTM=0.412 ipTM=0.186 tol=5.34
2024-07-28 06:53:32,519 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.9 pTM=0.41 ipTM=0.191 tol=3.77
2024-07-28 06:54:03,078 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.8 pTM=0.411 ipTM=0.203 tol=3.05
2024-07-28 06:54:33,662 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=69.1 pTM=0.408 ipTM=0.193 tol=2.59
2024-07-28 06:55:04,247 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.9 pTM=0.408 ipTM=0.188 tol=3.21
2024-07-28 06:55:34,808 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.6 pTM=0.404 ipTM=0.192 tol=3.48
2024-07-28 06:56:05,370 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.8 pTM=0.403 ipTM=0.199 tol=2.84
2024-07-28 06:56:35,951 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.6 pTM=0.41 ipTM=0.19 tol=6.12
2024-07-28 06:57:06,534 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.7 pTM=0.399 ipTM=0.179 tol=5.82
2024-07-28 06:57:37,089 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.5 pTM=0.41 ipTM=0.187 tol=3.68
2024-07-28 06:58:07,642 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.5 pTM=0.404 ipTM=0.191 tol=2.5
2024-07-28 06:58:07,643 alphafold2_multimer_v3_model_4_seed_000 took 948.4s (30 recycles)
2024-07-28 06:58:39,222 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.6 pTM=0.462 ipTM=0.207
2024-07-28 06:59:09,859 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=70.4 pTM=0.455 ipTM=0.313 tol=8.6
2024-07-28 06:59:40,495 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.3 pTM=0.459 ipTM=0.287 tol=5.52
2024-07-28 07:00:11,183 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70 pTM=0.432 ipTM=0.211 tol=4.39
2024-07-28 07:00:41,854 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.4 pTM=0.436 ipTM=0.225 tol=3.43
2024-07-28 07:01:12,536 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.2 pTM=0.429 ipTM=0.21 tol=6.75
2024-07-28 07:01:43,215 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.3 pTM=0.443 ipTM=0.23 tol=4.8
2024-07-28 07:02:13,909 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.5 pTM=0.428 ipTM=0.226 tol=4.12
2024-07-28 07:02:44,594 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.4 pTM=0.444 ipTM=0.234 tol=3.56
2024-07-28 07:03:15,284 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.2 pTM=0.427 ipTM=0.24 tol=5.41
2024-07-28 07:03:45,965 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.5 pTM=0.447 ipTM=0.241 tol=4.54
2024-07-28 07:04:16,592 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.3 pTM=0.43 ipTM=0.233 tol=4.36
2024-07-28 07:04:47,247 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.6 pTM=0.446 ipTM=0.235 tol=4.05
2024-07-28 07:05:17,886 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.3 pTM=0.436 ipTM=0.25 tol=3.59
2024-07-28 07:05:48,536 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.6 pTM=0.445 ipTM=0.256 tol=3.69
2024-07-28 07:06:19,193 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.4 pTM=0.431 ipTM=0.25 tol=4.28
2024-07-28 07:06:49,850 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.5 pTM=0.445 ipTM=0.243 tol=4.23
2024-07-28 07:07:20,487 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.5 pTM=0.434 ipTM=0.223 tol=5.59
2024-07-28 07:07:51,143 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=70.4 pTM=0.443 ipTM=0.231 tol=2.69
2024-07-28 07:08:21,802 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.1 pTM=0.429 ipTM=0.232 tol=6.64
2024-07-28 07:08:52,446 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.6 pTM=0.448 ipTM=0.241 tol=6.3
2024-07-28 07:09:23,102 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.4 pTM=0.43 ipTM=0.235 tol=4.42
2024-07-28 07:09:53,753 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.4 pTM=0.44 ipTM=0.225 tol=5.07
2024-07-28 07:10:24,409 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.4 pTM=0.431 ipTM=0.215 tol=5.68
2024-07-28 07:10:55,060 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.5 pTM=0.443 ipTM=0.243 tol=4.67
2024-07-28 07:11:25,702 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.3 pTM=0.431 ipTM=0.25 tol=3.79
2024-07-28 07:11:56,345 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.4 pTM=0.441 ipTM=0.252 tol=3.87
2024-07-28 07:12:27,000 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.4 pTM=0.433 ipTM=0.238 tol=5.34
2024-07-28 07:12:57,643 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.2 pTM=0.441 ipTM=0.235 tol=4.77
2024-07-28 07:13:28,286 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.2 pTM=0.43 ipTM=0.234 tol=3.92
2024-07-28 07:13:58,929 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.4 pTM=0.441 ipTM=0.259 tol=3.73
2024-07-28 07:13:58,930 alphafold2_multimer_v3_model_5_seed_000 took 950.3s (30 recycles)
2024-07-28 07:13:59,951 reranking models by 'multimer' metric
2024-07-28 07:14:03,662 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 07:16:08,679 Relaxation took 128.7s
2024-07-28 07:16:08,680 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.6 pTM=0.392 ipTM=0.318
2024-07-28 07:18:08,748 Relaxation took 120.1s
2024-07-28 07:18:08,748 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.4 pTM=0.441 ipTM=0.259
2024-07-28 07:20:57,805 Relaxation took 169.1s
2024-07-28 07:20:57,805 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.1 pTM=0.379 ipTM=0.215
2024-07-28 07:23:09,626 Relaxation took 131.8s
2024-07-28 07:23:09,626 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.5 pTM=0.404 ipTM=0.191
2024-07-28 07:26:46,869 Relaxation took 217.2s
2024-07-28 07:26:46,869 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.6 pTM=0.413 ipTM=0.162
2024-07-28 07:26:49,445 Done