2024-07-28 06:40:32,824 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 06:40:33,131 Running on GPU
2024-07-28 06:40:34,742 Found 6 citations for tools or databases
2024-07-28 06:40:34,742 Query 1/1: UBE2W_KLHL11 (length 870)
2024-07-28 06:40:35,159 Sleeping for 5s. Reason: PENDING
2024-07-28 06:40:40,580 Sleeping for 8s. Reason: RUNNING
2024-07-28 06:40:48,986 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:40:58,418 Sleeping for 7s. Reason: RUNNING
2024-07-28 06:41:05,839 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:41:12,251 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:41:21,678 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:41:28,102 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:41:33,524 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:41:42,955 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:41:49,405 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:41:58,831 Sleeping for 7s. Reason: RUNNING
2024-07-28 06:42:06,257 Sleeping for 7s. Reason: RUNNING
2024-07-28 06:42:13,691 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:42:19,160 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:42:30,238 Sleeping for 10s. Reason: PENDING
2024-07-28 06:42:40,650 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:42:50,067 Sleeping for 10s. Reason: RUNNING
2024-07-28 06:43:00,491 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:43:05,946 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:43:12,364 Sleeping for 10s. Reason: RUNNING
2024-07-28 06:43:22,795 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:43:28,212 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:43:37,641 Sleeping for 10s. Reason: RUNNING
2024-07-28 06:43:48,075 Sleeping for 8s. Reason: RUNNING
2024-07-28 06:43:59,300 Setting max_seq=508, max_extra_seq=2048
2024-07-28 06:47:06,830 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.9 pTM=0.654 ipTM=0.583
2024-07-28 06:47:23,780 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=76.8 pTM=0.66 ipTM=0.287 tol=4.4
2024-07-28 06:47:40,781 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=76.4 pTM=0.652 ipTM=0.232 tol=4.53
2024-07-28 06:47:57,812 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.7 pTM=0.646 ipTM=0.187 tol=2.83
2024-07-28 06:48:14,858 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.3 pTM=0.638 ipTM=0.165 tol=2.87
2024-07-28 06:48:31,933 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=77.6 pTM=0.63 ipTM=0.146 tol=3.36
2024-07-28 06:48:49,009 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=77.5 pTM=0.629 ipTM=0.147 tol=1.64
2024-07-28 06:49:06,106 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78.1 pTM=0.63 ipTM=0.139 tol=1.96
2024-07-28 06:49:23,192 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.6 pTM=0.627 ipTM=0.13 tol=4.45
2024-07-28 06:49:40,300 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.3 pTM=0.638 ipTM=0.152 tol=10.6
2024-07-28 06:49:57,412 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=77.4 pTM=0.628 ipTM=0.134 tol=3.58
2024-07-28 06:50:14,504 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=77.4 pTM=0.622 ipTM=0.245 tol=17.2
2024-07-28 06:50:31,616 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=77.2 pTM=0.627 ipTM=0.179 tol=2.01
2024-07-28 06:50:48,754 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=77.6 pTM=0.625 ipTM=0.15 tol=4.04
2024-07-28 06:51:05,911 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=77.5 pTM=0.623 ipTM=0.144 tol=3.38
2024-07-28 06:51:23,071 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=77.4 pTM=0.632 ipTM=0.141 tol=13.2
2024-07-28 06:51:40,224 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=76.3 pTM=0.637 ipTM=0.174 tol=6.14
2024-07-28 06:51:57,375 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=77.1 pTM=0.619 ipTM=0.178 tol=19.8
2024-07-28 06:52:14,535 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=77.8 pTM=0.624 ipTM=0.15 tol=2.93
2024-07-28 06:52:31,695 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=77.9 pTM=0.623 ipTM=0.151 tol=2.32
2024-07-28 06:52:48,841 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=77.1 pTM=0.616 ipTM=0.137 tol=4.74
2024-07-28 06:53:05,993 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.6 pTM=0.625 ipTM=0.133 tol=8.26
2024-07-28 06:53:23,146 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=77.4 pTM=0.629 ipTM=0.139 tol=3.44
2024-07-28 06:53:40,299 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=77.2 pTM=0.613 ipTM=0.155 tol=15.3
2024-07-28 06:53:57,430 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=77.4 pTM=0.618 ipTM=0.149 tol=5.58
2024-07-28 06:54:14,596 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78 pTM=0.625 ipTM=0.15 tol=4.52
2024-07-28 06:54:31,751 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=77.8 pTM=0.622 ipTM=0.135 tol=6.06
2024-07-28 06:54:48,903 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.4 pTM=0.628 ipTM=0.138 tol=10.7
2024-07-28 06:55:06,066 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77.2 pTM=0.62 ipTM=0.156 tol=14.7
2024-07-28 06:55:23,209 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=77.8 pTM=0.623 ipTM=0.153 tol=5.57
2024-07-28 06:55:40,381 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=77.6 pTM=0.622 ipTM=0.152 tol=4.62
2024-07-28 06:55:40,381 alphafold2_multimer_v3_model_1_seed_000 took 696.7s (30 recycles)
2024-07-28 06:55:57,999 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=70.6 pTM=0.594 ipTM=0.172
2024-07-28 06:56:15,182 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.5 pTM=0.623 ipTM=0.134 tol=12.4
2024-07-28 06:56:32,373 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.4 pTM=0.634 ipTM=0.161 tol=13.2
2024-07-28 06:56:49,569 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=77 pTM=0.645 ipTM=0.182 tol=22.1
2024-07-28 06:57:06,752 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=77.4 pTM=0.647 ipTM=0.19 tol=4.06
2024-07-28 06:57:23,952 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.6 pTM=0.625 ipTM=0.131 tol=19.3
2024-07-28 06:57:41,149 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77.5 pTM=0.643 ipTM=0.162 tol=17.8
2024-07-28 06:57:58,354 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=77.9 pTM=0.641 ipTM=0.17 tol=3.01
2024-07-28 06:58:15,557 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77.8 pTM=0.639 ipTM=0.163 tol=2.5
2024-07-28 06:58:32,764 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79 pTM=0.633 ipTM=0.174 tol=21.6
2024-07-28 06:58:49,978 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.9 pTM=0.63 ipTM=0.129 tol=11.6
2024-07-28 06:59:07,174 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=76.9 pTM=0.645 ipTM=0.195 tol=13.4
2024-07-28 06:59:24,361 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77.3 pTM=0.646 ipTM=0.2 tol=2.71
2024-07-28 06:59:41,546 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=77.4 pTM=0.645 ipTM=0.192 tol=1.83
2024-07-28 06:59:58,744 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.8 pTM=0.641 ipTM=0.18 tol=2.09
2024-07-28 07:00:15,973 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.8 pTM=0.627 ipTM=0.132 tol=16.8
2024-07-28 07:00:33,182 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.4 pTM=0.631 ipTM=0.138 tol=8.71
2024-07-28 07:00:50,371 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=77.1 pTM=0.645 ipTM=0.19 tol=10.2
2024-07-28 07:01:07,570 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.2 pTM=0.629 ipTM=0.138 tol=6.39
2024-07-28 07:01:24,775 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.8 pTM=0.626 ipTM=0.134 tol=5.89
2024-07-28 07:01:41,970 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.2 pTM=0.625 ipTM=0.141 tol=4.43
2024-07-28 07:01:59,162 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=77.6 pTM=0.634 ipTM=0.171 tol=6.53
2024-07-28 07:02:16,345 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.6 pTM=0.629 ipTM=0.143 tol=6.62
2024-07-28 07:02:33,533 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=77.8 pTM=0.635 ipTM=0.166 tol=6.03
2024-07-28 07:02:50,729 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.8 pTM=0.622 ipTM=0.136 tol=15.5
2024-07-28 07:03:07,923 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=77.4 pTM=0.638 ipTM=0.174 tol=16.6
2024-07-28 07:03:25,121 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.6 pTM=0.624 ipTM=0.137 tol=19.6
2024-07-28 07:03:42,311 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=77.7 pTM=0.636 ipTM=0.166 tol=18.3
2024-07-28 07:03:59,494 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=77.6 pTM=0.647 ipTM=0.206 tol=3.85
2024-07-28 07:04:16,673 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=77.7 pTM=0.641 ipTM=0.188 tol=1.83
2024-07-28 07:04:33,878 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.8 pTM=0.624 ipTM=0.136 tol=21.7
2024-07-28 07:04:33,878 alphafold2_multimer_v3_model_2_seed_000 took 533.0s (30 recycles)
2024-07-28 07:04:51,516 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=72.2 pTM=0.611 ipTM=0.179
2024-07-28 07:05:08,707 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.9 pTM=0.669 ipTM=0.231 tol=11.9
2024-07-28 07:05:25,921 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.8 pTM=0.649 ipTM=0.148 tol=22.8
2024-07-28 07:05:43,133 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=78.7 pTM=0.649 ipTM=0.156 tol=3.19
2024-07-28 07:06:00,336 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.3 pTM=0.649 ipTM=0.154 tol=3.74
2024-07-28 07:06:17,525 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=78.1 pTM=0.657 ipTM=0.216 tol=3.39
2024-07-28 07:06:34,727 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.6 pTM=0.654 ipTM=0.173 tol=1.35
2024-07-28 07:06:51,933 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.6 pTM=0.662 ipTM=0.225 tol=1.93
2024-07-28 07:07:09,131 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.5 pTM=0.653 ipTM=0.184 tol=1.51
2024-07-28 07:07:26,318 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.2 pTM=0.65 ipTM=0.188 tol=1.34
2024-07-28 07:07:43,528 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78.6 pTM=0.65 ipTM=0.144 tol=3.45
2024-07-28 07:08:00,709 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=77.9 pTM=0.652 ipTM=0.201 tol=3.45
2024-07-28 07:08:17,906 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.8 pTM=0.649 ipTM=0.148 tol=3.9
2024-07-28 07:08:35,098 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=78.4 pTM=0.651 ipTM=0.176 tol=3.61
2024-07-28 07:08:52,290 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=78.3 pTM=0.654 ipTM=0.2 tol=1.76
2024-07-28 07:09:09,471 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=78.1 pTM=0.657 ipTM=0.23 tol=1.74
2024-07-28 07:09:26,663 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=78.4 pTM=0.647 ipTM=0.157 tol=3.4
2024-07-28 07:09:43,847 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.1 pTM=0.663 ipTM=0.236 tol=3.5
2024-07-28 07:10:01,048 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=78.8 pTM=0.646 ipTM=0.138 tol=6
2024-07-28 07:10:18,247 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=78.1 pTM=0.656 ipTM=0.212 tol=5.64
2024-07-28 07:10:35,435 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=78.7 pTM=0.647 ipTM=0.131 tol=12.6
2024-07-28 07:10:52,613 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=77.3 pTM=0.661 ipTM=0.201 tol=13.3
2024-07-28 07:11:09,782 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=77.4 pTM=0.671 ipTM=0.229 tol=2.4
2024-07-28 07:11:26,968 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.9 pTM=0.67 ipTM=0.236 tol=1.97
2024-07-28 07:11:44,149 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.1 pTM=0.674 ipTM=0.245 tol=2.29
2024-07-28 07:12:01,331 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78.1 pTM=0.677 ipTM=0.263 tol=2.36
2024-07-28 07:12:18,512 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=78.2 pTM=0.671 ipTM=0.24 tol=0.967
2024-07-28 07:12:35,687 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=78.4 pTM=0.678 ipTM=0.254 tol=0.818
2024-07-28 07:12:52,870 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=78.4 pTM=0.679 ipTM=0.256 tol=0.697
2024-07-28 07:13:10,043 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=78.2 pTM=0.677 ipTM=0.261 tol=0.794
2024-07-28 07:13:27,253 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=78.3 pTM=0.677 ipTM=0.247 tol=2.48
2024-07-28 07:13:27,254 alphafold2_multimer_v3_model_3_seed_000 took 532.9s (30 recycles)
2024-07-28 07:13:44,889 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.7 pTM=0.606 ipTM=0.16
2024-07-28 07:14:02,095 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=75.6 pTM=0.632 ipTM=0.145 tol=8.27
2024-07-28 07:14:19,289 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.5 pTM=0.651 ipTM=0.174 tol=6.16
2024-07-28 07:14:36,456 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=76.6 pTM=0.652 ipTM=0.179 tol=3.46
2024-07-28 07:14:53,642 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.4 pTM=0.659 ipTM=0.213 tol=3.59
2024-07-28 07:15:10,827 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=76.2 pTM=0.655 ipTM=0.202 tol=3.5
2024-07-28 07:15:28,018 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=76.9 pTM=0.66 ipTM=0.204 tol=3.17
2024-07-28 07:15:45,219 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=77.3 pTM=0.659 ipTM=0.189 tol=3.65
2024-07-28 07:16:02,401 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76.8 pTM=0.66 ipTM=0.219 tol=2.77
2024-07-28 07:16:19,577 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=76.9 pTM=0.66 ipTM=0.212 tol=2.87
2024-07-28 07:16:36,755 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77 pTM=0.665 ipTM=0.225 tol=2.57
2024-07-28 07:16:53,930 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=76.8 pTM=0.659 ipTM=0.228 tol=1.93
2024-07-28 07:17:11,109 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.1 pTM=0.672 ipTM=0.25 tol=2.52
2024-07-28 07:17:28,290 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.2 pTM=0.662 ipTM=0.219 tol=2.14
2024-07-28 07:17:45,491 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.2 pTM=0.672 ipTM=0.237 tol=2
2024-07-28 07:18:02,682 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.6 pTM=0.665 ipTM=0.215 tol=1.3
2024-07-28 07:18:19,864 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77 pTM=0.667 ipTM=0.232 tol=1.77
2024-07-28 07:18:37,063 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.7 pTM=0.665 ipTM=0.217 tol=3.49
2024-07-28 07:18:54,269 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.3 pTM=0.674 ipTM=0.253 tol=3.16
2024-07-28 07:19:11,477 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.8 pTM=0.666 ipTM=0.226 tol=1.8
2024-07-28 07:19:28,684 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.3 pTM=0.666 ipTM=0.236 tol=1.87
2024-07-28 07:19:45,900 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.8 pTM=0.667 ipTM=0.225 tol=2.38
2024-07-28 07:20:03,106 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.2 pTM=0.67 ipTM=0.25 tol=2.12
2024-07-28 07:20:20,338 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78 pTM=0.665 ipTM=0.221 tol=1.71
2024-07-28 07:20:37,551 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.6 pTM=0.673 ipTM=0.256 tol=1.24
2024-07-28 07:20:54,759 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.7 pTM=0.667 ipTM=0.234 tol=1.09
2024-07-28 07:21:11,964 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.3 pTM=0.67 ipTM=0.248 tol=1.57
2024-07-28 07:21:29,177 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=77.9 pTM=0.667 ipTM=0.222 tol=1.84
2024-07-28 07:21:46,389 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.4 pTM=0.674 ipTM=0.26 tol=3.18
2024-07-28 07:22:03,592 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.9 pTM=0.665 ipTM=0.223 tol=2.75
2024-07-28 07:22:20,817 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.4 pTM=0.67 ipTM=0.237 tol=2.11
2024-07-28 07:22:20,818 alphafold2_multimer_v3_model_4_seed_000 took 533.1s (30 recycles)
2024-07-28 07:22:38,468 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=70.6 pTM=0.603 ipTM=0.136
2024-07-28 07:22:55,703 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=76.6 pTM=0.626 ipTM=0.145 tol=11.9
2024-07-28 07:23:12,963 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.6 pTM=0.635 ipTM=0.138 tol=16.7
2024-07-28 07:23:30,212 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.5 pTM=0.662 ipTM=0.209 tol=10
2024-07-28 07:23:47,472 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=78.1 pTM=0.652 ipTM=0.139 tol=3.58
2024-07-28 07:24:04,726 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.8 pTM=0.651 ipTM=0.151 tol=18.8
2024-07-28 07:24:21,988 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.2 pTM=0.654 ipTM=0.166 tol=2.2
2024-07-28 07:24:39,220 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.6 pTM=0.652 ipTM=0.176 tol=2.96
2024-07-28 07:24:56,448 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.3 pTM=0.653 ipTM=0.181 tol=2.84
2024-07-28 07:25:13,672 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=78.3 pTM=0.648 ipTM=0.167 tol=2.75
2024-07-28 07:25:30,910 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.5 pTM=0.649 ipTM=0.152 tol=3.29
2024-07-28 07:25:48,141 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=77.9 pTM=0.647 ipTM=0.162 tol=1.74
2024-07-28 07:26:05,366 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.2 pTM=0.65 ipTM=0.181 tol=3.26
2024-07-28 07:26:22,622 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.1 pTM=0.65 ipTM=0.178 tol=2.24
2024-07-28 07:26:39,892 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.1 pTM=0.65 ipTM=0.17 tol=2.59
2024-07-28 07:26:57,145 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.1 pTM=0.647 ipTM=0.156 tol=2.05
2024-07-28 07:27:14,391 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=77.9 pTM=0.646 ipTM=0.161 tol=3.2
2024-07-28 07:27:31,656 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.2 pTM=0.65 ipTM=0.157 tol=2.44
2024-07-28 07:27:48,897 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=77.9 pTM=0.646 ipTM=0.164 tol=1.97
2024-07-28 07:28:06,141 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=78.2 pTM=0.647 ipTM=0.158 tol=3.49
2024-07-28 07:28:23,369 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=77.8 pTM=0.645 ipTM=0.166 tol=3.93
2024-07-28 07:28:40,614 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=77.9 pTM=0.646 ipTM=0.158 tol=5.21
2024-07-28 07:28:57,851 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=77.9 pTM=0.646 ipTM=0.157 tol=5.64
2024-07-28 07:29:15,085 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78.1 pTM=0.645 ipTM=0.151 tol=9.48
2024-07-28 07:29:32,309 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=78.1 pTM=0.647 ipTM=0.157 tol=3.13
2024-07-28 07:29:49,536 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=78 pTM=0.646 ipTM=0.155 tol=4.38
2024-07-28 07:30:06,765 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78.1 pTM=0.646 ipTM=0.159 tol=3.61
2024-07-28 07:30:23,988 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=78.2 pTM=0.648 ipTM=0.155 tol=0.648
2024-07-28 07:30:41,211 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.1 pTM=0.648 ipTM=0.151 tol=2.29
2024-07-28 07:30:58,444 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=78.1 pTM=0.646 ipTM=0.15 tol=5.05
2024-07-28 07:31:15,681 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.1 pTM=0.646 ipTM=0.15 tol=1.98
2024-07-28 07:31:15,682 alphafold2_multimer_v3_model_5_seed_000 took 534.4s (30 recycles)
2024-07-28 07:31:16,153 reranking models by 'multimer' metric
2024-07-28 07:31:19,057 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 07:32:43,569 Relaxation took 87.4s
2024-07-28 07:32:43,569 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.3 pTM=0.677 ipTM=0.247
2024-07-28 07:33:59,351 Relaxation took 75.8s
2024-07-28 07:33:59,351 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.4 pTM=0.67 ipTM=0.237
2024-07-28 07:35:04,145 Relaxation took 64.8s
2024-07-28 07:35:04,146 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.1 pTM=0.646 ipTM=0.15
2024-07-28 07:36:03,166 Relaxation took 59.0s
2024-07-28 07:36:03,166 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=77.6 pTM=0.622 ipTM=0.152
2024-07-28 07:36:48,343 Relaxation took 45.2s
2024-07-28 07:36:48,343 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.8 pTM=0.624 ipTM=0.136
2024-07-28 07:36:50,267 Done