2024-07-28 06:52:07,468 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 06:52:07,779 Running on GPU 2024-07-28 06:52:11,132 Found 6 citations for tools or databases 2024-07-28 06:52:11,132 Query 1/1: UHRF1_CISH (length 1065) 2024-07-28 06:52:11,598 Sleeping for 5s. Reason: PENDING 2024-07-28 06:52:17,012 Sleeping for 10s. Reason: RUNNING 2024-07-28 06:52:27,430 Sleeping for 10s. Reason: RUNNING 2024-07-28 06:52:37,859 Sleeping for 8s. Reason: RUNNING 2024-07-28 06:52:46,285 Sleeping for 6s. Reason: RUNNING 2024-07-28 06:52:52,708 Sleeping for 9s. Reason: RUNNING 2024-07-28 06:53:02,135 Sleeping for 9s. Reason: RUNNING 2024-07-28 06:53:11,569 Sleeping for 5s. Reason: RUNNING 2024-07-28 06:53:16,997 Sleeping for 6s. Reason: RUNNING 2024-07-28 06:53:23,432 Sleeping for 10s. Reason: RUNNING 2024-07-28 06:53:33,865 Sleeping for 5s. Reason: RUNNING 2024-07-28 06:53:39,304 Sleeping for 10s. Reason: RUNNING 2024-07-28 06:53:49,707 Sleeping for 10s. Reason: RUNNING 2024-07-28 06:54:00,140 Sleeping for 6s. Reason: RUNNING 2024-07-28 06:54:06,556 Sleeping for 10s. Reason: RUNNING 2024-07-28 06:54:17,012 Sleeping for 7s. Reason: RUNNING 2024-07-28 06:54:26,261 Sleeping for 6s. Reason: PENDING 2024-07-28 06:54:32,676 Sleeping for 8s. Reason: RUNNING 2024-07-28 06:54:41,097 Sleeping for 7s. Reason: RUNNING 2024-07-28 06:54:48,522 Sleeping for 5s. Reason: RUNNING 2024-07-28 06:54:53,931 Sleeping for 5s. Reason: RUNNING 2024-07-28 06:54:59,343 Sleeping for 8s. Reason: RUNNING 2024-07-28 06:55:07,760 Sleeping for 10s. Reason: RUNNING 2024-07-28 06:55:18,187 Sleeping for 8s. Reason: RUNNING 2024-07-28 06:55:26,594 Sleeping for 5s. Reason: RUNNING 2024-07-28 06:55:37,366 Setting max_seq=508, max_extra_seq=2048 2024-07-28 06:59:18,163 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.1 pTM=0.49 ipTM=0.241 2024-07-28 06:59:44,314 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69 pTM=0.469 ipTM=0.194 tol=5.83 2024-07-28 07:00:10,559 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70 pTM=0.469 ipTM=0.201 tol=4.16 2024-07-28 07:00:36,890 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.5 pTM=0.465 ipTM=0.225 tol=4.62 2024-07-28 07:01:03,305 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.4 pTM=0.471 ipTM=0.239 tol=2.08 2024-07-28 07:01:29,731 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.9 pTM=0.467 ipTM=0.238 tol=2.26 2024-07-28 07:01:56,165 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.4 pTM=0.475 ipTM=0.222 tol=2.33 2024-07-28 07:02:22,583 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=71.6 pTM=0.473 ipTM=0.222 tol=1.29 2024-07-28 07:02:49,019 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.1 pTM=0.479 ipTM=0.24 tol=0.921 2024-07-28 07:03:15,452 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.8 pTM=0.475 ipTM=0.207 tol=0.867 2024-07-28 07:03:41,880 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.1 pTM=0.47 ipTM=0.202 tol=0.728 2024-07-28 07:04:08,315 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.3 pTM=0.472 ipTM=0.191 tol=1.07 2024-07-28 07:04:34,772 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.7 pTM=0.476 ipTM=0.205 tol=0.622 2024-07-28 07:05:01,217 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.6 pTM=0.473 ipTM=0.193 tol=0.592 2024-07-28 07:05:27,676 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.4 pTM=0.471 ipTM=0.181 tol=0.508 2024-07-28 07:05:54,124 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71.5 pTM=0.473 ipTM=0.181 tol=1.15 2024-07-28 07:06:20,576 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.5 pTM=0.474 ipTM=0.187 tol=1.54 2024-07-28 07:06:47,029 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.9 pTM=0.479 ipTM=0.186 tol=0.821 2024-07-28 07:07:13,492 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.2 pTM=0.467 ipTM=0.188 tol=1.65 2024-07-28 07:07:39,944 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.4 pTM=0.47 ipTM=0.18 tol=1.1 2024-07-28 07:08:06,411 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.6 pTM=0.473 ipTM=0.178 tol=0.659 2024-07-28 07:08:32,855 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.8 pTM=0.475 ipTM=0.18 tol=0.78 2024-07-28 07:08:59,306 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=71.6 pTM=0.473 ipTM=0.179 tol=0.582 2024-07-28 07:09:25,755 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.9 pTM=0.479 ipTM=0.18 tol=0.877 2024-07-28 07:09:52,220 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.8 pTM=0.475 ipTM=0.178 tol=0.816 2024-07-28 07:10:18,660 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71.5 pTM=0.475 ipTM=0.181 tol=1.06 2024-07-28 07:10:45,110 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.4 pTM=0.474 ipTM=0.196 tol=0.854 2024-07-28 07:11:11,547 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71.4 pTM=0.479 ipTM=0.202 tol=0.781 2024-07-28 07:11:38,007 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=71.3 pTM=0.476 ipTM=0.218 tol=0.972 2024-07-28 07:12:04,432 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.6 pTM=0.482 ipTM=0.261 tol=0.805 2024-07-28 07:12:30,888 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=71.7 pTM=0.477 ipTM=0.207 tol=0.722 2024-07-28 07:12:30,888 alphafold2_multimer_v3_model_1_seed_000 took 1008.8s (30 recycles) 2024-07-28 07:12:58,048 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.5 pTM=0.496 ipTM=0.232 2024-07-28 07:13:24,561 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.9 pTM=0.473 ipTM=0.178 tol=13.5 2024-07-28 07:13:51,064 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.9 pTM=0.478 ipTM=0.171 tol=4.34 2024-07-28 07:14:17,597 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71.5 pTM=0.48 ipTM=0.166 tol=2.95 2024-07-28 07:14:44,110 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.4 pTM=0.489 ipTM=0.167 tol=1.78 2024-07-28 07:15:10,654 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.5 pTM=0.494 ipTM=0.168 tol=0.953 2024-07-28 07:15:37,177 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=72.9 pTM=0.5 ipTM=0.168 tol=0.866 2024-07-28 07:16:03,690 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.8 pTM=0.498 ipTM=0.168 tol=1.09 2024-07-28 07:16:30,177 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.1 pTM=0.501 ipTM=0.165 tol=1.29 2024-07-28 07:16:56,682 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73 pTM=0.502 ipTM=0.16 tol=1.66 2024-07-28 07:17:23,197 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=72.4 pTM=0.495 ipTM=0.154 tol=1.43 2024-07-28 07:17:49,708 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.6 pTM=0.496 ipTM=0.155 tol=1.16 2024-07-28 07:18:16,237 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.4 pTM=0.497 ipTM=0.152 tol=5.07 2024-07-28 07:18:42,758 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72 pTM=0.491 ipTM=0.153 tol=2.31 2024-07-28 07:19:09,306 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.2 pTM=0.493 ipTM=0.156 tol=1.77 2024-07-28 07:19:35,876 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=72.4 pTM=0.496 ipTM=0.152 tol=1.79 2024-07-28 07:20:02,459 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=72 pTM=0.492 ipTM=0.153 tol=1.55 2024-07-28 07:20:29,070 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.3 pTM=0.497 ipTM=0.155 tol=1.38 2024-07-28 07:20:55,663 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=71.9 pTM=0.49 ipTM=0.153 tol=2.88 2024-07-28 07:21:22,233 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.1 pTM=0.495 ipTM=0.155 tol=2.64 2024-07-28 07:21:48,783 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.4 pTM=0.5 ipTM=0.156 tol=1.89 2024-07-28 07:22:15,355 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.6 pTM=0.498 ipTM=0.154 tol=1.14 2024-07-28 07:22:41,897 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=72.6 pTM=0.503 ipTM=0.171 tol=2.59 2024-07-28 07:23:08,458 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.2 pTM=0.506 ipTM=0.17 tol=2.73 2024-07-28 07:23:35,035 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.4 pTM=0.509 ipTM=0.181 tol=1.65 2024-07-28 07:24:01,603 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73 pTM=0.506 ipTM=0.189 tol=1.58 2024-07-28 07:24:28,143 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=72.9 pTM=0.505 ipTM=0.19 tol=0.95 2024-07-28 07:24:54,664 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=72.8 pTM=0.511 ipTM=0.184 tol=2.98 2024-07-28 07:25:21,202 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=72.8 pTM=0.508 ipTM=0.18 tol=1.6 2024-07-28 07:25:47,749 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.1 pTM=0.513 ipTM=0.18 tol=1.37 2024-07-28 07:26:14,310 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.1 pTM=0.508 ipTM=0.182 tol=1.35 2024-07-28 07:26:14,311 alphafold2_multimer_v3_model_2_seed_000 took 822.7s (30 recycles) 2024-07-28 07:26:41,546 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.8 pTM=0.482 ipTM=0.254 2024-07-28 07:27:08,086 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.4 pTM=0.476 ipTM=0.203 tol=6.25 2024-07-28 07:27:34,684 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.9 pTM=0.46 ipTM=0.166 tol=15.2 2024-07-28 07:28:01,268 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.1 pTM=0.467 ipTM=0.164 tol=4.26 2024-07-28 07:28:27,846 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.3 pTM=0.48 ipTM=0.188 tol=3.42 2024-07-28 07:28:54,409 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.6 pTM=0.483 ipTM=0.203 tol=2.36 2024-07-28 07:29:20,988 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=71.9 pTM=0.486 ipTM=0.216 tol=2.48 2024-07-28 07:29:47,529 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.1 pTM=0.488 ipTM=0.223 tol=1.74 2024-07-28 07:30:14,074 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=72.1 pTM=0.489 ipTM=0.217 tol=1.85 2024-07-28 07:30:40,622 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=72.2 pTM=0.488 ipTM=0.213 tol=4.12 2024-07-28 07:31:07,176 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.9 pTM=0.486 ipTM=0.206 tol=1.14 2024-07-28 07:31:33,735 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.9 pTM=0.487 ipTM=0.211 tol=1.17 2024-07-28 07:32:00,263 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=72.1 pTM=0.49 ipTM=0.219 tol=2.06 2024-07-28 07:32:26,785 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72 pTM=0.488 ipTM=0.21 tol=1.55 2024-07-28 07:32:53,298 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=72 pTM=0.487 ipTM=0.203 tol=1.76 2024-07-28 07:33:19,819 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=72.1 pTM=0.485 ipTM=0.203 tol=2.1 2024-07-28 07:33:46,331 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=72 pTM=0.488 ipTM=0.201 tol=2.41 2024-07-28 07:34:12,854 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=72.5 pTM=0.493 ipTM=0.202 tol=1.46 2024-07-28 07:34:39,384 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.9 pTM=0.485 ipTM=0.207 tol=2.04 2024-07-28 07:35:05,952 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=72 pTM=0.486 ipTM=0.206 tol=0.889 2024-07-28 07:35:32,504 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.2 pTM=0.493 ipTM=0.212 tol=1.52 2024-07-28 07:35:59,075 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=72.1 pTM=0.489 ipTM=0.211 tol=1.95 2024-07-28 07:36:25,664 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72.1 pTM=0.488 ipTM=0.204 tol=1.7 2024-07-28 07:36:52,240 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=72.3 pTM=0.49 ipTM=0.208 tol=0.9 2024-07-28 07:37:18,798 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72 pTM=0.485 ipTM=0.197 tol=1.55 2024-07-28 07:37:45,368 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72.1 pTM=0.484 ipTM=0.202 tol=2.05 2024-07-28 07:38:11,944 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.3 pTM=0.488 ipTM=0.205 tol=1.61 2024-07-28 07:38:38,518 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.4 pTM=0.49 ipTM=0.214 tol=2.14 2024-07-28 07:39:05,050 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.4 pTM=0.49 ipTM=0.214 tol=1.05 2024-07-28 07:39:31,604 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.5 pTM=0.49 ipTM=0.211 tol=0.708 2024-07-28 07:39:58,174 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.4 pTM=0.489 ipTM=0.202 tol=0.816 2024-07-28 07:39:58,174 alphafold2_multimer_v3_model_3_seed_000 took 823.2s (30 recycles) 2024-07-28 07:40:25,392 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.9 pTM=0.474 ipTM=0.291 2024-07-28 07:40:51,939 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.1 pTM=0.438 ipTM=0.205 tol=9.16 2024-07-28 07:41:18,526 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.1 pTM=0.428 ipTM=0.159 tol=6.88 2024-07-28 07:41:45,107 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.2 pTM=0.441 ipTM=0.163 tol=3.83 2024-07-28 07:42:11,677 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.9 pTM=0.458 ipTM=0.178 tol=2.18 2024-07-28 07:42:38,244 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69.8 pTM=0.456 ipTM=0.174 tol=1.29 2024-07-28 07:43:04,828 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.9 pTM=0.461 ipTM=0.176 tol=1.52 2024-07-28 07:43:31,423 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.8 pTM=0.459 ipTM=0.172 tol=1.69 2024-07-28 07:43:58,030 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.2 pTM=0.465 ipTM=0.176 tol=1.29 2024-07-28 07:44:24,620 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.5 pTM=0.464 ipTM=0.172 tol=1.99 2024-07-28 07:44:51,202 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.9 pTM=0.463 ipTM=0.171 tol=1.32 2024-07-28 07:45:17,783 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.2 pTM=0.467 ipTM=0.182 tol=1.88 2024-07-28 07:45:44,384 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.3 pTM=0.469 ipTM=0.176 tol=1.2 2024-07-28 07:46:10,981 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.6 pTM=0.47 ipTM=0.176 tol=1.12 2024-07-28 07:46:37,582 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.6 pTM=0.471 ipTM=0.176 tol=1.13 2024-07-28 07:47:04,189 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.7 pTM=0.469 ipTM=0.18 tol=2.04 2024-07-28 07:47:30,797 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70 pTM=0.467 ipTM=0.175 tol=1.78 2024-07-28 07:47:57,399 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.5 pTM=0.467 ipTM=0.177 tol=1.86 2024-07-28 07:48:23,984 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70 pTM=0.465 ipTM=0.177 tol=1.5 2024-07-28 07:48:50,568 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.9 pTM=0.463 ipTM=0.173 tol=0.92 2024-07-28 07:49:17,142 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.4 pTM=0.47 ipTM=0.177 tol=1.21 2024-07-28 07:49:43,732 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.3 pTM=0.467 ipTM=0.177 tol=1.39 2024-07-28 07:50:10,323 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.5 pTM=0.47 ipTM=0.181 tol=2.05 2024-07-28 07:50:36,898 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.5 pTM=0.467 ipTM=0.18 tol=1.66 2024-07-28 07:51:03,486 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.3 pTM=0.464 ipTM=0.182 tol=1.18 2024-07-28 07:51:30,092 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.3 pTM=0.466 ipTM=0.178 tol=0.842 2024-07-28 07:51:56,682 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.8 pTM=0.46 ipTM=0.174 tol=0.851 2024-07-28 07:52:23,259 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.1 pTM=0.469 ipTM=0.179 tol=1.51 2024-07-28 07:52:49,856 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.3 pTM=0.472 ipTM=0.182 tol=1.46 2024-07-28 07:53:16,441 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.4 pTM=0.471 ipTM=0.178 tol=1.45 2024-07-28 07:53:43,012 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.3 pTM=0.469 ipTM=0.182 tol=0.996 2024-07-28 07:53:43,013 alphafold2_multimer_v3_model_4_seed_000 took 824.1s (30 recycles) 2024-07-28 07:54:10,263 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.5 pTM=0.487 ipTM=0.353 2024-07-28 07:54:36,814 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.8 pTM=0.458 ipTM=0.272 tol=7.93 2024-07-28 07:55:03,436 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.3 pTM=0.442 ipTM=0.182 tol=10.6 2024-07-28 07:55:30,072 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.9 pTM=0.441 ipTM=0.16 tol=8.2 2024-07-28 07:55:56,646 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.7 pTM=0.456 ipTM=0.176 tol=3.13 2024-07-28 07:56:23,251 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.4 pTM=0.458 ipTM=0.173 tol=1.33 2024-07-28 07:56:49,856 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.3 pTM=0.468 ipTM=0.18 tol=1.82 2024-07-28 07:57:16,455 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.1 pTM=0.466 ipTM=0.177 tol=1.38 2024-07-28 07:57:43,070 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.2 pTM=0.472 ipTM=0.184 tol=1.31 2024-07-28 07:58:09,654 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.2 pTM=0.473 ipTM=0.187 tol=1.48 2024-07-28 07:58:36,272 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.6 pTM=0.469 ipTM=0.184 tol=1.57 2024-07-28 07:59:02,880 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.9 pTM=0.471 ipTM=0.19 tol=1.44 2024-07-28 07:59:29,500 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.9 pTM=0.47 ipTM=0.189 tol=1.13 2024-07-28 07:59:56,094 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.1 pTM=0.471 ipTM=0.19 tol=1.76 2024-07-28 08:00:22,671 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70 pTM=0.469 ipTM=0.188 tol=2.12 2024-07-28 08:00:49,249 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.4 pTM=0.471 ipTM=0.192 tol=1.36 2024-07-28 08:01:15,857 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.9 pTM=0.469 ipTM=0.187 tol=1.12 2024-07-28 08:01:42,476 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.2 pTM=0.47 ipTM=0.19 tol=1.1 2024-07-28 08:02:09,110 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.9 pTM=0.468 ipTM=0.191 tol=1.73 2024-07-28 08:02:35,741 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.8 pTM=0.468 ipTM=0.189 tol=1.28 2024-07-28 08:03:02,364 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70 pTM=0.47 ipTM=0.188 tol=1.21 2024-07-28 08:03:28,996 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=69.9 pTM=0.469 ipTM=0.19 tol=1.54 2024-07-28 08:03:55,627 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=69.9 pTM=0.47 ipTM=0.188 tol=1.5 2024-07-28 08:04:22,255 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.2 pTM=0.468 ipTM=0.188 tol=1.71 2024-07-28 08:04:48,895 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.1 pTM=0.468 ipTM=0.186 tol=1.82 2024-07-28 08:05:15,544 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70 pTM=0.467 ipTM=0.187 tol=1.8 2024-07-28 08:05:42,173 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70 pTM=0.468 ipTM=0.186 tol=1.51 2024-07-28 08:06:08,790 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.6 pTM=0.468 ipTM=0.189 tol=2.04 2024-07-28 08:06:35,422 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.1 pTM=0.468 ipTM=0.192 tol=2.03 2024-07-28 08:07:02,040 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.4 pTM=0.47 ipTM=0.191 tol=1.54 2024-07-28 08:07:28,636 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.3 pTM=0.471 ipTM=0.189 tol=1.69 2024-07-28 08:07:28,636 alphafold2_multimer_v3_model_5_seed_000 took 824.9s (30 recycles) 2024-07-28 08:07:29,328 reranking models by 'multimer' metric 2024-07-28 08:07:32,359 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 08:08:37,069 Relaxation took 67.7s 2024-07-28 08:08:37,069 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71.7 pTM=0.477 ipTM=0.207 2024-07-28 08:09:54,747 Relaxation took 77.7s 2024-07-28 08:09:54,747 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.4 pTM=0.489 ipTM=0.202 2024-07-28 08:11:39,301 Relaxation took 104.6s 2024-07-28 08:11:39,301 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.1 pTM=0.508 ipTM=0.182 2024-07-28 08:12:19,223 Relaxation took 39.9s 2024-07-28 08:12:19,223 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.3 pTM=0.471 ipTM=0.189 2024-07-28 08:12:48,445 Relaxation took 29.2s 2024-07-28 08:12:48,445 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.3 pTM=0.469 ipTM=0.182 2024-07-28 08:12:50,432 Done