2024-07-28 06:55:20,679 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 06:55:20,973 Running on GPU
2024-07-28 06:55:23,685 Found 6 citations for tools or databases
2024-07-28 06:55:23,685 Query 1/1: UHRF1_DCAF1 (length 2314)
2024-07-28 06:55:24,135 Sleeping for 6s. Reason: PENDING
2024-07-28 06:55:30,581 Sleeping for 8s. Reason: RUNNING
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2024-07-28 06:56:10,753 Sleeping for 6s. Reason: RUNNING
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2024-07-28 06:56:27,999 Sleeping for 8s. Reason: RUNNING
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2024-07-28 06:56:45,869 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:56:51,291 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:56:56,727 Sleeping for 7s. Reason: RUNNING
2024-07-28 06:57:04,148 Sleeping for 7s. Reason: RUNNING
2024-07-28 06:57:11,578 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:57:16,995 Sleeping for 5s. Reason: RUNNING
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2024-07-28 06:57:28,849 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:57:38,269 Sleeping for 10s. Reason: RUNNING
2024-07-28 06:57:48,690 Sleeping for 8s. Reason: RUNNING
2024-07-28 06:57:57,116 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:58:03,544 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:58:09,990 Sleeping for 10s. Reason: RUNNING
2024-07-28 06:58:20,409 Sleeping for 7s. Reason: RUNNING
2024-07-28 06:58:27,833 Sleeping for 7s. Reason: RUNNING
2024-07-28 06:58:35,269 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:58:41,682 Sleeping for 8s. Reason: RUNNING
2024-07-28 06:58:50,116 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:58:58,496 Sleeping for 9s. Reason: PENDING
2024-07-28 06:59:07,949 Sleeping for 7s. Reason: RUNNING
2024-07-28 06:59:15,357 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:59:24,779 Sleeping for 6s. Reason: RUNNING
2024-07-28 06:59:31,187 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:59:36,621 Sleeping for 9s. Reason: RUNNING
2024-07-28 06:59:46,041 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:59:51,502 Sleeping for 5s. Reason: RUNNING
2024-07-28 06:59:56,914 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:00:02,368 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:00:12,815 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:00:23,255 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:00:33,694 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:00:40,115 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:00:45,537 Sleeping for 9s. Reason: RUNNING
2024-07-28 07:01:01,236 Setting max_seq=508, max_extra_seq=2048
2024-07-28 07:08:09,130 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.8 pTM=0.517 ipTM=0.248
2024-07-28 07:12:04,858 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.4 pTM=0.498 ipTM=0.208 tol=12.4
2024-07-28 07:16:00,323 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.8 pTM=0.498 ipTM=0.21 tol=11.4
2024-07-28 07:19:55,530 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.9 pTM=0.505 ipTM=0.26 tol=22.3
2024-07-28 07:23:51,081 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.9 pTM=0.481 ipTM=0.209 tol=16.3
2024-07-28 07:27:46,725 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=65.8 pTM=0.488 ipTM=0.204 tol=8.23
2024-07-28 07:31:42,223 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.5 pTM=0.489 ipTM=0.211 tol=11.9
2024-07-28 07:35:37,869 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=65.4 pTM=0.486 ipTM=0.211 tol=5.81
2024-07-28 07:39:33,531 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.9 pTM=0.476 ipTM=0.207 tol=4.18
2024-07-28 07:43:28,960 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.8 pTM=0.484 ipTM=0.234 tol=15
2024-07-28 07:47:24,542 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.2 pTM=0.478 ipTM=0.215 tol=15.7
2024-07-28 07:51:20,002 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.2 pTM=0.473 ipTM=0.21 tol=7.7
2024-07-28 07:55:15,598 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.8 pTM=0.476 ipTM=0.217 tol=19.2
2024-07-28 07:59:11,156 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=65.2 pTM=0.469 ipTM=0.215 tol=14
2024-07-28 08:03:06,583 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.1 pTM=0.473 ipTM=0.215 tol=7.17
2024-07-28 08:07:02,169 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.1 pTM=0.466 ipTM=0.208 tol=7.09
2024-07-28 08:10:57,567 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=65.1 pTM=0.467 ipTM=0.208 tol=8.36
2024-07-28 08:14:52,908 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.9 pTM=0.461 ipTM=0.209 tol=4.7
2024-07-28 08:18:48,201 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.6 pTM=0.46 ipTM=0.209 tol=4.53
2024-07-28 08:22:43,649 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.8 pTM=0.463 ipTM=0.211 tol=3.87
2024-07-28 08:26:39,116 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.8 pTM=0.461 ipTM=0.208 tol=2.81
2024-07-28 08:30:34,563 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.7 pTM=0.456 ipTM=0.211 tol=2.61
2024-07-28 08:34:30,058 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.9 pTM=0.46 ipTM=0.21 tol=9.05
2024-07-28 08:38:25,503 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.8 pTM=0.462 ipTM=0.213 tol=7.36
2024-07-28 08:42:20,959 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.6 pTM=0.457 ipTM=0.216 tol=3.76
2024-07-28 08:46:16,402 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.6 pTM=0.455 ipTM=0.21 tol=5.13
2024-07-28 08:50:11,864 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=65.2 pTM=0.462 ipTM=0.213 tol=3.83
2024-07-28 08:54:07,406 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.8 pTM=0.458 ipTM=0.209 tol=3.37
2024-07-28 08:58:02,922 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.9 pTM=0.461 ipTM=0.216 tol=2.74
2024-07-28 09:01:58,353 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.7 pTM=0.458 ipTM=0.211 tol=3.11
2024-07-28 09:05:53,862 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.3 pTM=0.462 ipTM=0.211 tol=3.11
2024-07-28 09:05:53,865 alphafold2_multimer_v3_model_1_seed_000 took 7489.1s (30 recycles)
2024-07-28 09:09:52,344 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.3 pTM=0.536 ipTM=0.307
2024-07-28 09:13:47,804 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66 pTM=0.545 ipTM=0.277 tol=18.8
2024-07-28 09:17:43,483 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=66 pTM=0.528 ipTM=0.214 tol=10.7
2024-07-28 09:21:38,989 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66.5 pTM=0.529 ipTM=0.211 tol=6.02
2024-07-28 09:25:34,496 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67 pTM=0.528 ipTM=0.213 tol=4.65
2024-07-28 09:29:30,075 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.9 pTM=0.527 ipTM=0.212 tol=2.71
2024-07-28 09:33:25,596 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.9 pTM=0.527 ipTM=0.213 tol=3.57
2024-07-28 09:37:21,171 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.2 pTM=0.528 ipTM=0.214 tol=2.76
2024-07-28 09:41:16,677 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.8 pTM=0.526 ipTM=0.213 tol=3.3
2024-07-28 09:45:12,090 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.8 pTM=0.526 ipTM=0.214 tol=3.09
2024-07-28 09:49:07,426 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.7 pTM=0.525 ipTM=0.213 tol=2.5
2024-07-28 09:53:02,796 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.1 pTM=0.527 ipTM=0.214 tol=2.08
2024-07-28 09:56:58,291 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.8 pTM=0.526 ipTM=0.214 tol=2.5
2024-07-28 10:00:53,562 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.9 pTM=0.527 ipTM=0.215 tol=2.55
2024-07-28 10:04:48,936 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=66.8 pTM=0.526 ipTM=0.214 tol=2.42
2024-07-28 10:08:44,310 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.8 pTM=0.526 ipTM=0.211 tol=1.86
2024-07-28 10:12:39,731 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.9 pTM=0.525 ipTM=0.213 tol=1.66
2024-07-28 10:16:35,178 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.9 pTM=0.523 ipTM=0.21 tol=3.42
2024-07-28 10:20:30,687 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=66.7 pTM=0.524 ipTM=0.213 tol=3.54
2024-07-28 10:24:26,120 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=66.7 pTM=0.525 ipTM=0.211 tol=2.15
2024-07-28 10:28:21,579 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.8 pTM=0.523 ipTM=0.213 tol=2.04
2024-07-28 10:32:17,005 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67 pTM=0.524 ipTM=0.212 tol=2.67
2024-07-28 10:36:12,505 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.1 pTM=0.524 ipTM=0.213 tol=2.21
2024-07-28 10:40:08,083 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.1 pTM=0.525 ipTM=0.214 tol=1.89
2024-07-28 10:44:03,603 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.9 pTM=0.524 ipTM=0.214 tol=1.49
2024-07-28 10:47:59,099 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.8 pTM=0.523 ipTM=0.214 tol=1.3
2024-07-28 10:51:54,474 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.1 pTM=0.525 ipTM=0.214 tol=1.76
2024-07-28 10:55:49,984 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.1 pTM=0.522 ipTM=0.213 tol=1.28
2024-07-28 10:59:45,479 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.9 pTM=0.522 ipTM=0.216 tol=2.73
2024-07-28 11:03:40,982 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.1 pTM=0.522 ipTM=0.214 tol=3.9
2024-07-28 11:07:36,452 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.1 pTM=0.522 ipTM=0.214 tol=1.68
2024-07-28 11:07:36,455 alphafold2_multimer_v3_model_2_seed_000 took 7299.5s (30 recycles)
2024-07-28 11:11:35,300 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.5 pTM=0.53 ipTM=0.239
2024-07-28 11:15:30,805 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.6 pTM=0.521 ipTM=0.208 tol=18.6
2024-07-28 11:19:26,311 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.6 pTM=0.518 ipTM=0.221 tol=7.67
2024-07-28 11:23:21,667 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.8 pTM=0.517 ipTM=0.237 tol=5.25
2024-07-28 11:27:17,054 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.4 pTM=0.511 ipTM=0.23 tol=4.12
2024-07-28 11:31:12,396 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.8 pTM=0.516 ipTM=0.238 tol=2.49
2024-07-28 11:35:07,788 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.5 pTM=0.513 ipTM=0.229 tol=2.48
2024-07-28 11:39:03,305 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.8 pTM=0.515 ipTM=0.234 tol=2.22
2024-07-28 11:42:58,899 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.8 pTM=0.513 ipTM=0.23 tol=2.16
2024-07-28 11:46:54,298 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.7 pTM=0.511 ipTM=0.229 tol=2.18
2024-07-28 11:50:49,758 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.7 pTM=0.514 ipTM=0.23 tol=2.13
2024-07-28 11:54:45,190 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.8 pTM=0.516 ipTM=0.23 tol=1.95
2024-07-28 11:58:40,717 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.6 pTM=0.514 ipTM=0.227 tol=2.46
2024-07-28 12:02:36,155 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.9 pTM=0.516 ipTM=0.232 tol=2.38
2024-07-28 12:06:31,576 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.7 pTM=0.515 ipTM=0.229 tol=2.07
2024-07-28 12:10:27,059 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.7 pTM=0.515 ipTM=0.238 tol=1.95
2024-07-28 12:14:22,550 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.8 pTM=0.516 ipTM=0.233 tol=1.95
2024-07-28 12:18:17,944 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.1 pTM=0.518 ipTM=0.233 tol=1.83
2024-07-28 12:22:13,445 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.9 pTM=0.517 ipTM=0.23 tol=2.53
2024-07-28 12:26:08,836 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67 pTM=0.52 ipTM=0.235 tol=2.82
2024-07-28 12:30:04,371 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.9 pTM=0.517 ipTM=0.232 tol=2.6
2024-07-28 12:33:59,788 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.8 pTM=0.517 ipTM=0.231 tol=2
2024-07-28 12:37:55,170 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.9 pTM=0.519 ipTM=0.236 tol=2.97
2024-07-28 12:41:50,662 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.9 pTM=0.52 ipTM=0.238 tol=2.99
2024-07-28 12:45:46,047 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.1 pTM=0.52 ipTM=0.238 tol=2.03
2024-07-28 12:49:41,403 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67 pTM=0.518 ipTM=0.235 tol=2.25
2024-07-28 12:53:36,791 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67 pTM=0.519 ipTM=0.234 tol=2.4
2024-07-28 12:57:32,099 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.9 pTM=0.517 ipTM=0.232 tol=2.77
2024-07-28 13:01:27,498 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.9 pTM=0.519 ipTM=0.235 tol=1.95
2024-07-28 13:05:22,893 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.2 pTM=0.52 ipTM=0.232 tol=2.11
2024-07-28 13:09:18,208 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.3 pTM=0.521 ipTM=0.235 tol=2.53
2024-07-28 13:09:18,211 alphafold2_multimer_v3_model_3_seed_000 took 7298.4s (30 recycles)
2024-07-28 13:13:16,793 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.6 pTM=0.556 ipTM=0.332
2024-07-28 13:17:12,467 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.5 pTM=0.526 ipTM=0.24 tol=12.4
2024-07-28 13:21:08,133 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.9 pTM=0.521 ipTM=0.214 tol=6.93
2024-07-28 13:25:03,872 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.8 pTM=0.516 ipTM=0.204 tol=9.32
2024-07-28 13:28:59,457 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.9 pTM=0.519 ipTM=0.213 tol=5.23
2024-07-28 13:32:55,145 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.2 pTM=0.514 ipTM=0.203 tol=5.86
2024-07-28 13:36:50,889 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.4 pTM=0.52 ipTM=0.209 tol=4.66
2024-07-28 13:40:46,740 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=65.4 pTM=0.517 ipTM=0.203 tol=4.8
2024-07-28 13:44:42,631 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.4 pTM=0.518 ipTM=0.203 tol=3.26
2024-07-28 13:48:38,463 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.2 pTM=0.512 ipTM=0.2 tol=4.53
2024-07-28 13:52:34,148 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.3 pTM=0.517 ipTM=0.203 tol=2.71
2024-07-28 13:56:29,853 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.4 pTM=0.515 ipTM=0.2 tol=4.63
2024-07-28 14:00:25,443 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65.6 pTM=0.52 ipTM=0.204 tol=4.37
2024-07-28 14:04:21,381 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.4 pTM=0.511 ipTM=0.203 tol=6.68
2024-07-28 14:08:17,280 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.9 pTM=0.516 ipTM=0.208 tol=10.2
2024-07-28 14:12:13,122 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.2 pTM=0.517 ipTM=0.207 tol=10.8
2024-07-28 14:16:09,017 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=65 pTM=0.514 ipTM=0.206 tol=6.16
2024-07-28 14:20:04,855 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=65.2 pTM=0.517 ipTM=0.205 tol=6.84
2024-07-28 14:24:00,638 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=65 pTM=0.518 ipTM=0.208 tol=6.52
2024-07-28 14:27:56,440 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=65.2 pTM=0.521 ipTM=0.208 tol=7.89
2024-07-28 14:31:52,355 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=65 pTM=0.513 ipTM=0.204 tol=8.53
2024-07-28 14:35:47,983 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65 pTM=0.52 ipTM=0.209 tol=8.2
2024-07-28 14:39:43,802 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.6 pTM=0.514 ipTM=0.206 tol=9.62
2024-07-28 14:43:39,494 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.9 pTM=0.52 ipTM=0.213 tol=8.36
2024-07-28 14:47:35,313 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.5 pTM=0.518 ipTM=0.207 tol=18.7
2024-07-28 14:51:31,067 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.6 pTM=0.519 ipTM=0.214 tol=8.35
2024-07-28 14:55:26,707 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.2 pTM=0.522 ipTM=0.217 tol=6.05
2024-07-28 14:59:22,536 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.1 pTM=0.514 ipTM=0.209 tol=10.4
2024-07-28 15:03:18,139 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=65 pTM=0.521 ipTM=0.219 tol=8.61
2024-07-28 15:07:13,769 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.2 pTM=0.52 ipTM=0.215 tol=4.07
2024-07-28 15:11:09,352 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.7 pTM=0.525 ipTM=0.222 tol=5.83
2024-07-28 15:11:09,355 alphafold2_multimer_v3_model_4_seed_000 took 7308.1s (30 recycles)
2024-07-28 15:15:07,877 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.8 pTM=0.518 ipTM=0.231
2024-07-28 15:19:03,483 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.1 pTM=0.509 ipTM=0.208 tol=14
2024-07-28 15:22:59,000 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=64.9 pTM=0.501 ipTM=0.208 tol=8.16
2024-07-28 15:26:54,362 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.4 pTM=0.505 ipTM=0.208 tol=10.6
2024-07-28 15:30:50,028 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=64.6 pTM=0.5 ipTM=0.206 tol=11.4
2024-07-28 15:34:45,430 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.3 pTM=0.511 ipTM=0.203 tol=10.9
2024-07-28 15:38:40,931 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=65.3 pTM=0.515 ipTM=0.2 tol=4.43
2024-07-28 15:42:36,398 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=65.5 pTM=0.517 ipTM=0.201 tol=3.51
2024-07-28 15:46:31,881 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.4 pTM=0.518 ipTM=0.202 tol=4.56
2024-07-28 15:50:27,460 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=65.5 pTM=0.519 ipTM=0.201 tol=3.9
2024-07-28 15:54:22,965 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.3 pTM=0.517 ipTM=0.201 tol=3.21
2024-07-28 15:58:18,461 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.2 pTM=0.517 ipTM=0.201 tol=3.53
2024-07-28 16:02:14,062 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.5 pTM=0.519 ipTM=0.2 tol=3.7
2024-07-28 16:06:09,719 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=65.6 pTM=0.519 ipTM=0.202 tol=4.07
2024-07-28 16:10:05,390 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=65.6 pTM=0.517 ipTM=0.201 tol=5.18
2024-07-28 16:14:00,953 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=65.6 pTM=0.518 ipTM=0.201 tol=2.83
2024-07-28 16:17:56,470 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.6 pTM=0.519 ipTM=0.201 tol=2.53
2024-07-28 16:21:52,005 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=65.9 pTM=0.52 ipTM=0.201 tol=4.12
2024-07-28 16:25:47,705 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.7 pTM=0.518 ipTM=0.201 tol=3.05
2024-07-28 16:29:43,332 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=65.7 pTM=0.518 ipTM=0.203 tol=4.68
2024-07-28 16:33:38,837 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.7 pTM=0.52 ipTM=0.203 tol=3.46
2024-07-28 16:37:34,386 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.4 pTM=0.518 ipTM=0.202 tol=3.89
2024-07-28 16:41:30,037 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.8 pTM=0.518 ipTM=0.201 tol=5.65
2024-07-28 16:45:25,587 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=65.6 pTM=0.521 ipTM=0.202 tol=8.02
2024-07-28 16:49:21,121 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.7 pTM=0.519 ipTM=0.203 tol=4.59
2024-07-28 16:53:16,490 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.5 pTM=0.517 ipTM=0.203 tol=3.36
2024-07-28 16:57:11,986 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.8 pTM=0.518 ipTM=0.202 tol=3.8
2024-07-28 17:01:07,482 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=65.6 pTM=0.517 ipTM=0.201 tol=3.52
2024-07-28 17:05:02,970 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.6 pTM=0.518 ipTM=0.202 tol=3.46
2024-07-28 17:08:58,380 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.7 pTM=0.519 ipTM=0.203 tol=2.22
2024-07-28 17:12:53,819 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.9 pTM=0.519 ipTM=0.203 tol=5.36
2024-07-28 17:12:53,821 alphafold2_multimer_v3_model_5_seed_000 took 7301.4s (30 recycles)
2024-07-28 17:12:56,903 reranking models by 'multimer' metric
2024-07-28 17:12:59,286 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 17:23:19,796 Relaxation took 622.9s
2024-07-28 17:23:19,796 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.3 pTM=0.521 ipTM=0.235
2024-07-28 17:32:42,468 Relaxation took 562.7s
2024-07-28 17:32:42,468 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.7 pTM=0.525 ipTM=0.222
2024-07-28 17:42:12,098 Relaxation took 569.6s
2024-07-28 17:42:12,098 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.1 pTM=0.522 ipTM=0.214
2024-07-28 17:53:19,858 Relaxation took 667.8s
2024-07-28 17:53:19,859 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.9 pTM=0.519 ipTM=0.203
2024-07-28 18:02:40,098 Relaxation took 560.2s
2024-07-28 18:02:40,099 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.3 pTM=0.462 ipTM=0.211
2024-07-28 18:02:46,793 Done