2024-07-28 07:24:44,982 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 07:24:45,369 Running on GPU
2024-07-28 07:24:47,293 Found 6 citations for tools or databases
2024-07-28 07:24:47,293 Query 1/1: UHRF1_TNFAIP1 (length 1123)
2024-07-28 07:24:47,757 Sleeping for 5s. Reason: PENDING
2024-07-28 07:24:53,166 Sleeping for 9s. Reason: RUNNING
2024-07-28 07:25:02,592 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:25:11,036 Sleeping for 6s. Reason: RUNNING
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2024-07-28 07:25:24,895 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:25:35,314 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:25:40,740 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:25:49,159 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:25:54,593 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:26:01,010 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:26:07,427 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:26:15,867 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:26:22,319 Sleeping for 7s. Reason: RUNNING
2024-07-28 07:26:29,769 Sleeping for 7s. Reason: RUNNING
2024-07-28 07:26:37,228 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:26:47,660 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:27:00,015 Sleeping for 7s. Reason: PENDING
2024-07-28 07:27:07,430 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:27:12,871 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:27:19,295 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:27:27,713 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:27:34,130 Sleeping for 9s. Reason: RUNNING
2024-07-28 07:27:43,565 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:27:48,991 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:27:55,421 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:28:01,855 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:28:08,322 Sleeping for 9s. Reason: RUNNING
2024-07-28 07:28:17,776 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:28:24,192 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:28:39,227 Setting max_seq=508, max_extra_seq=2048
2024-07-28 07:32:53,386 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.5 pTM=0.493 ipTM=0.284
2024-07-28 07:33:26,674 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.2 pTM=0.489 ipTM=0.28 tol=6.39
2024-07-28 07:34:00,122 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.6 pTM=0.465 ipTM=0.214 tol=2.63
2024-07-28 07:34:33,617 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=67.9 pTM=0.468 ipTM=0.215 tol=2.41
2024-07-28 07:35:07,135 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69 pTM=0.477 ipTM=0.208 tol=2.99
2024-07-28 07:35:40,664 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69 pTM=0.483 ipTM=0.218 tol=1.46
2024-07-28 07:36:14,216 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.1 pTM=0.481 ipTM=0.209 tol=1.55
2024-07-28 07:36:47,781 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.4 pTM=0.483 ipTM=0.208 tol=1.29
2024-07-28 07:37:21,349 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.9 pTM=0.482 ipTM=0.202 tol=1.12
2024-07-28 07:37:54,933 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.9 pTM=0.486 ipTM=0.205 tol=1.11
2024-07-28 07:38:28,519 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.8 pTM=0.481 ipTM=0.201 tol=1.54
2024-07-28 07:39:02,111 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.1 pTM=0.49 ipTM=0.205 tol=1.09
2024-07-28 07:39:35,694 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.1 pTM=0.481 ipTM=0.204 tol=1.25
2024-07-28 07:40:09,272 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.5 pTM=0.484 ipTM=0.211 tol=0.829
2024-07-28 07:40:42,853 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70 pTM=0.483 ipTM=0.204 tol=1.13
2024-07-28 07:41:16,419 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.7 pTM=0.482 ipTM=0.207 tol=0.901
2024-07-28 07:41:49,990 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.8 pTM=0.484 ipTM=0.203 tol=1.35
2024-07-28 07:42:23,575 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.9 pTM=0.486 ipTM=0.205 tol=1.64
2024-07-28 07:42:57,139 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.4 pTM=0.478 ipTM=0.198 tol=0.707
2024-07-28 07:43:30,734 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=69.8 pTM=0.484 ipTM=0.198 tol=1.63
2024-07-28 07:44:04,334 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.9 pTM=0.484 ipTM=0.198 tol=1.4
2024-07-28 07:44:37,937 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.9 pTM=0.482 ipTM=0.202 tol=1
2024-07-28 07:45:11,526 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.9 pTM=0.482 ipTM=0.199 tol=1.08
2024-07-28 07:45:45,098 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.9 pTM=0.48 ipTM=0.2 tol=0.917
2024-07-28 07:46:18,700 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.1 pTM=0.48 ipTM=0.2 tol=1.14
2024-07-28 07:46:52,273 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.6 pTM=0.477 ipTM=0.199 tol=0.85
2024-07-28 07:47:25,832 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.4 pTM=0.473 ipTM=0.197 tol=1.16
2024-07-28 07:47:59,403 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.9 pTM=0.482 ipTM=0.205 tol=0.987
2024-07-28 07:48:32,996 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.8 pTM=0.48 ipTM=0.199 tol=0.788
2024-07-28 07:49:06,582 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.6 pTM=0.478 ipTM=0.201 tol=1.46
2024-07-28 07:49:40,183 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.9 pTM=0.477 ipTM=0.202 tol=1.38
2024-07-28 07:49:40,184 alphafold2_multimer_v3_model_1_seed_000 took 1254.3s (30 recycles)
2024-07-28 07:50:14,803 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.6 pTM=0.503 ipTM=0.251
2024-07-28 07:50:48,453 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.9 pTM=0.504 ipTM=0.216 tol=5.85
2024-07-28 07:51:22,114 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.1 pTM=0.484 ipTM=0.206 tol=5.25
2024-07-28 07:51:55,832 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=71 pTM=0.472 ipTM=0.181 tol=5.15
2024-07-28 07:52:29,550 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=71.9 pTM=0.479 ipTM=0.179 tol=2.4
2024-07-28 07:53:03,268 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.8 pTM=0.482 ipTM=0.187 tol=2.91
2024-07-28 07:53:37,015 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.9 pTM=0.486 ipTM=0.2 tol=2.93
2024-07-28 07:54:10,764 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=72.1 pTM=0.488 ipTM=0.197 tol=1.85
2024-07-28 07:54:44,487 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=72.2 pTM=0.489 ipTM=0.191 tol=1.86
2024-07-28 07:55:18,171 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=71.9 pTM=0.491 ipTM=0.193 tol=1.54
2024-07-28 07:55:51,876 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=71.8 pTM=0.494 ipTM=0.195 tol=1.61
2024-07-28 07:56:25,560 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=72.1 pTM=0.498 ipTM=0.189 tol=2.04
2024-07-28 07:56:59,244 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=72.1 pTM=0.497 ipTM=0.189 tol=1.31
2024-07-28 07:57:32,909 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=72.4 pTM=0.494 ipTM=0.187 tol=0.882
2024-07-28 07:58:06,566 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=72.1 pTM=0.497 ipTM=0.189 tol=2.51
2024-07-28 07:58:40,231 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=71.8 pTM=0.495 ipTM=0.191 tol=3.4
2024-07-28 07:59:13,902 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=71.9 pTM=0.498 ipTM=0.188 tol=1.53
2024-07-28 07:59:47,589 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=72.4 pTM=0.502 ipTM=0.186 tol=1.67
2024-07-28 08:00:21,284 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=72.6 pTM=0.503 ipTM=0.184 tol=1.79
2024-07-28 08:00:54,967 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=72.7 pTM=0.506 ipTM=0.186 tol=1.6
2024-07-28 08:01:28,656 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=72.6 pTM=0.507 ipTM=0.196 tol=1.79
2024-07-28 08:02:02,356 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=72.5 pTM=0.513 ipTM=0.253 tol=2.82
2024-07-28 08:02:36,033 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.2 pTM=0.532 ipTM=0.31 tol=4.53
2024-07-28 08:03:09,715 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.3 pTM=0.535 ipTM=0.335 tol=2.36
2024-07-28 08:03:43,379 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.6 pTM=0.535 ipTM=0.335 tol=1.23
2024-07-28 08:04:17,053 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.8 pTM=0.548 ipTM=0.352 tol=0.97
2024-07-28 08:04:50,715 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.6 pTM=0.54 ipTM=0.342 tol=0.873
2024-07-28 08:05:24,358 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.3 pTM=0.559 ipTM=0.389 tol=0.592
2024-07-28 08:05:57,970 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.5 pTM=0.565 ipTM=0.429 tol=0.99
2024-07-28 08:06:31,563 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.9 pTM=0.578 ipTM=0.463 tol=0.92
2024-07-28 08:07:05,138 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.8 pTM=0.577 ipTM=0.465 tol=0.845
2024-07-28 08:07:05,139 alphafold2_multimer_v3_model_2_seed_000 took 1044.0s (30 recycles)
2024-07-28 08:07:39,751 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.2 pTM=0.495 ipTM=0.289
2024-07-28 08:08:13,398 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.4 pTM=0.474 ipTM=0.217 tol=6.45
2024-07-28 08:08:47,066 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.8 pTM=0.461 ipTM=0.21 tol=4.62
2024-07-28 08:09:20,724 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.4 pTM=0.467 ipTM=0.213 tol=3.01
2024-07-28 08:09:54,403 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.4 pTM=0.479 ipTM=0.256 tol=5.68
2024-07-28 08:10:28,108 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.9 pTM=0.471 ipTM=0.227 tol=1.63
2024-07-28 08:11:01,814 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.2 pTM=0.475 ipTM=0.232 tol=2.03
2024-07-28 08:11:35,523 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.3 pTM=0.479 ipTM=0.231 tol=1.64
2024-07-28 08:12:09,246 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.9 pTM=0.478 ipTM=0.228 tol=2.55
2024-07-28 08:12:42,983 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.6 pTM=0.476 ipTM=0.233 tol=1.9
2024-07-28 08:13:16,726 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.8 pTM=0.475 ipTM=0.246 tol=2.62
2024-07-28 08:13:50,468 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.6 pTM=0.478 ipTM=0.248 tol=1.58
2024-07-28 08:14:24,226 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.4 pTM=0.476 ipTM=0.231 tol=0.919
2024-07-28 08:14:57,964 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.4 pTM=0.479 ipTM=0.255 tol=1.25
2024-07-28 08:15:31,694 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.4 pTM=0.473 ipTM=0.233 tol=1.71
2024-07-28 08:16:05,401 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.5 pTM=0.479 ipTM=0.249 tol=1.68
2024-07-28 08:16:39,096 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71 pTM=0.478 ipTM=0.236 tol=1.58
2024-07-28 08:17:12,791 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.8 pTM=0.475 ipTM=0.231 tol=1.11
2024-07-28 08:17:46,455 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.5 pTM=0.488 ipTM=0.314 tol=2.38
2024-07-28 08:18:20,109 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.9 pTM=0.483 ipTM=0.28 tol=2.13
2024-07-28 08:18:53,767 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.4 pTM=0.479 ipTM=0.245 tol=3.83
2024-07-28 08:19:27,456 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.8 pTM=0.475 ipTM=0.242 tol=1.81
2024-07-28 08:20:01,177 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.9 pTM=0.47 ipTM=0.218 tol=2.09
2024-07-28 08:20:34,924 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.9 pTM=0.469 ipTM=0.209 tol=1.72
2024-07-28 08:21:08,617 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.9 pTM=0.469 ipTM=0.2 tol=3.78
2024-07-28 08:21:42,308 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.9 pTM=0.473 ipTM=0.215 tol=3.8
2024-07-28 08:22:15,983 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.9 pTM=0.478 ipTM=0.245 tol=3.72
2024-07-28 08:22:49,684 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71.3 pTM=0.475 ipTM=0.243 tol=2.52
2024-07-28 08:23:23,370 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.9 pTM=0.476 ipTM=0.232 tol=3.03
2024-07-28 08:23:57,099 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.1 pTM=0.468 ipTM=0.203 tol=1.56
2024-07-28 08:24:30,829 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.5 pTM=0.466 ipTM=0.207 tol=2.03
2024-07-28 08:24:30,830 alphafold2_multimer_v3_model_3_seed_000 took 1044.7s (30 recycles)
2024-07-28 08:25:05,511 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.6 pTM=0.481 ipTM=0.303
2024-07-28 08:25:39,180 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.7 pTM=0.465 ipTM=0.215 tol=3.97
2024-07-28 08:26:12,867 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.1 pTM=0.456 ipTM=0.202 tol=4.55
2024-07-28 08:26:46,558 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.4 pTM=0.453 ipTM=0.2 tol=4.65
2024-07-28 08:27:20,238 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.4 pTM=0.454 ipTM=0.2 tol=2.75
2024-07-28 08:27:53,952 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.5 pTM=0.454 ipTM=0.211 tol=1.74
2024-07-28 08:28:27,678 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.5 pTM=0.458 ipTM=0.197 tol=1.93
2024-07-28 08:29:01,410 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.6 pTM=0.453 ipTM=0.193 tol=2.19
2024-07-28 08:29:35,138 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.9 pTM=0.456 ipTM=0.193 tol=5.17
2024-07-28 08:30:08,882 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.2 pTM=0.45 ipTM=0.193 tol=4.42
2024-07-28 08:30:42,645 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.1 pTM=0.454 ipTM=0.198 tol=2.78
2024-07-28 08:31:16,411 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.3 pTM=0.46 ipTM=0.203 tol=1.61
2024-07-28 08:31:50,175 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=69.1 pTM=0.463 ipTM=0.202 tol=3.82
2024-07-28 08:32:23,926 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.8 pTM=0.461 ipTM=0.203 tol=1.8
2024-07-28 08:32:57,662 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.2 pTM=0.463 ipTM=0.2 tol=1.46
2024-07-28 08:33:31,356 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.9 pTM=0.465 ipTM=0.199 tol=3.2
2024-07-28 08:34:05,030 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.7 pTM=0.472 ipTM=0.206 tol=9.05
2024-07-28 08:34:38,711 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.8 pTM=0.469 ipTM=0.205 tol=5.09
2024-07-28 08:35:12,398 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.3 pTM=0.463 ipTM=0.2 tol=6.91
2024-07-28 08:35:46,099 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.3 pTM=0.464 ipTM=0.202 tol=2.72
2024-07-28 08:36:19,778 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.3 pTM=0.467 ipTM=0.199 tol=2.51
2024-07-28 08:36:53,447 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.9 pTM=0.46 ipTM=0.2 tol=4.7
2024-07-28 08:37:27,119 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.6 pTM=0.463 ipTM=0.204 tol=4.86
2024-07-28 08:38:00,818 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.6 pTM=0.461 ipTM=0.204 tol=2.92
2024-07-28 08:38:34,503 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.8 pTM=0.459 ipTM=0.203 tol=3.15
2024-07-28 08:39:08,182 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=69.4 pTM=0.464 ipTM=0.204 tol=3.21
2024-07-28 08:39:41,842 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.1 pTM=0.459 ipTM=0.196 tol=2.7
2024-07-28 08:40:15,505 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.8 pTM=0.458 ipTM=0.196 tol=2.13
2024-07-28 08:40:49,166 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.4 pTM=0.456 ipTM=0.202 tol=2.59
2024-07-28 08:41:22,817 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.2 pTM=0.456 ipTM=0.203 tol=1.75
2024-07-28 08:41:56,463 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.2 pTM=0.453 ipTM=0.197 tol=1.45
2024-07-28 08:41:56,464 alphafold2_multimer_v3_model_4_seed_000 took 1044.7s (30 recycles)
2024-07-28 08:42:31,143 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.8 pTM=0.489 ipTM=0.286
2024-07-28 08:43:04,829 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.8 pTM=0.463 ipTM=0.235 tol=4.64
2024-07-28 08:43:38,543 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.6 pTM=0.451 ipTM=0.216 tol=6.3
2024-07-28 08:44:12,271 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.3 pTM=0.454 ipTM=0.226 tol=5.82
2024-07-28 08:44:45,962 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68.9 pTM=0.464 ipTM=0.224 tol=2.39
2024-07-28 08:45:19,632 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.1 pTM=0.466 ipTM=0.238 tol=1.86
2024-07-28 08:45:53,334 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69 pTM=0.467 ipTM=0.235 tol=1.15
2024-07-28 08:46:27,044 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.8 pTM=0.461 ipTM=0.231 tol=1.11
2024-07-28 08:47:00,758 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.8 pTM=0.467 ipTM=0.229 tol=1.2
2024-07-28 08:47:34,469 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.6 pTM=0.466 ipTM=0.23 tol=1.07
2024-07-28 08:48:08,195 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.8 pTM=0.465 ipTM=0.226 tol=1.88
2024-07-28 08:48:41,963 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.9 pTM=0.467 ipTM=0.223 tol=2.29
2024-07-28 08:49:15,717 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.6 pTM=0.462 ipTM=0.211 tol=1.73
2024-07-28 08:49:49,524 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.1 pTM=0.452 ipTM=0.2 tol=4.75
2024-07-28 08:50:23,316 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.1 pTM=0.456 ipTM=0.199 tol=7.57
2024-07-28 08:50:57,080 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.7 pTM=0.457 ipTM=0.22 tol=5.03
2024-07-28 08:51:30,827 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=70.9 pTM=0.458 ipTM=0.247 tol=2.94
2024-07-28 08:52:04,556 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71.2 pTM=0.461 ipTM=0.257 tol=1.41
2024-07-28 08:52:38,276 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.2 pTM=0.457 ipTM=0.255 tol=1.85
2024-07-28 08:53:11,990 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.3 pTM=0.461 ipTM=0.264 tol=1.2
2024-07-28 08:53:45,688 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71 pTM=0.452 ipTM=0.247 tol=1.29
2024-07-28 08:54:19,403 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.5 pTM=0.446 ipTM=0.244 tol=0.818
2024-07-28 08:54:53,101 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=70.9 pTM=0.445 ipTM=0.252 tol=1.28
2024-07-28 08:55:26,795 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.7 pTM=0.444 ipTM=0.255 tol=1.23
2024-07-28 08:56:00,507 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.6 pTM=0.441 ipTM=0.255 tol=1.05
2024-07-28 08:56:34,187 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=70.8 pTM=0.448 ipTM=0.254 tol=1.09
2024-07-28 08:57:07,909 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=70.6 pTM=0.44 ipTM=0.245 tol=0.794
2024-07-28 08:57:41,583 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.8 pTM=0.446 ipTM=0.25 tol=0.8
2024-07-28 08:58:15,246 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.4 pTM=0.437 ipTM=0.248 tol=1.23
2024-07-28 08:58:48,920 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=70.4 pTM=0.438 ipTM=0.242 tol=1.03
2024-07-28 08:59:22,605 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=70.7 pTM=0.443 ipTM=0.257 tol=1.32
2024-07-28 08:59:22,606 alphafold2_multimer_v3_model_5_seed_000 took 1045.2s (30 recycles)
2024-07-28 08:59:23,586 reranking models by 'multimer' metric
2024-07-28 08:59:24,814 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 09:01:22,333 Relaxation took 118.7s
2024-07-28 09:01:22,333 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.8 pTM=0.577 ipTM=0.465
2024-07-28 09:03:01,847 Relaxation took 99.5s
2024-07-28 09:03:01,847 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=70.7 pTM=0.443 ipTM=0.257
2024-07-28 09:04:12,659 Relaxation took 70.8s
2024-07-28 09:04:12,659 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.5 pTM=0.466 ipTM=0.207
2024-07-28 09:06:37,803 Relaxation took 145.1s
2024-07-28 09:06:37,803 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.9 pTM=0.477 ipTM=0.202
2024-07-28 09:08:52,000 Relaxation took 134.2s
2024-07-28 09:08:52,000 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.2 pTM=0.453 ipTM=0.197
2024-07-28 09:08:54,585 Done