2024-07-28 07:27:46,994 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 07:27:47,342 Running on GPU
2024-07-28 07:27:48,292 Found 6 citations for tools or databases
2024-07-28 07:27:48,292 Query 1/1: USP18_FBXL2 (length 795)
2024-07-28 07:27:48,733 Sleeping for 9s. Reason: PENDING
2024-07-28 07:27:58,163 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:28:04,570 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:28:10,008 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:28:18,471 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:28:24,896 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:28:30,319 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:28:40,746 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:28:46,179 Sleeping for 9s. Reason: RUNNING
2024-07-28 07:28:55,624 Sleeping for 7s. Reason: RUNNING
2024-07-28 07:29:03,077 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:29:13,489 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:29:18,909 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:29:24,328 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:29:34,755 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:29:45,212 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:29:51,632 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:30:03,759 Sleeping for 7s. Reason: PENDING
2024-07-28 07:30:11,202 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:30:21,633 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:30:30,057 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:30:40,479 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:30:50,895 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:31:04,653 Setting max_seq=508, max_extra_seq=2048
2024-07-28 07:34:18,411 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=76.1 pTM=0.588 ipTM=0.322
2024-07-28 07:34:31,581 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75.6 pTM=0.552 ipTM=0.258 tol=7.22
2024-07-28 07:34:44,784 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=76.2 pTM=0.541 ipTM=0.223 tol=4.16
2024-07-28 07:34:58,018 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=77.2 pTM=0.557 ipTM=0.248 tol=4.74
2024-07-28 07:35:11,307 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=77.4 pTM=0.556 ipTM=0.243 tol=2.21
2024-07-28 07:35:24,589 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=76.9 pTM=0.546 ipTM=0.236 tol=1.67
2024-07-28 07:35:37,947 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=76.8 pTM=0.558 ipTM=0.254 tol=2.04
2024-07-28 07:35:51,316 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=76.8 pTM=0.548 ipTM=0.241 tol=1.98
2024-07-28 07:36:04,699 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=77.2 pTM=0.569 ipTM=0.264 tol=1.4
2024-07-28 07:36:18,075 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=77.1 pTM=0.548 ipTM=0.234 tol=1.07
2024-07-28 07:36:31,440 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=76.8 pTM=0.565 ipTM=0.263 tol=1.45
2024-07-28 07:36:44,824 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=71.9 pTM=0.542 ipTM=0.222 tol=9.7
2024-07-28 07:36:58,183 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=76 pTM=0.556 ipTM=0.244 tol=9.23
2024-07-28 07:37:11,544 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=76.1 pTM=0.533 ipTM=0.205 tol=6.19
2024-07-28 07:37:24,928 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.8 pTM=0.539 ipTM=0.231 tol=5.89
2024-07-28 07:37:38,304 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=75.9 pTM=0.531 ipTM=0.199 tol=4.6
2024-07-28 07:37:51,675 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.4 pTM=0.542 ipTM=0.245 tol=2.35
2024-07-28 07:38:05,071 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=76.1 pTM=0.533 ipTM=0.199 tol=3.77
2024-07-28 07:38:18,458 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=75.4 pTM=0.563 ipTM=0.276 tol=2.5
2024-07-28 07:38:31,855 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=76.1 pTM=0.541 ipTM=0.229 tol=4.23
2024-07-28 07:38:45,232 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.6 pTM=0.591 ipTM=0.318 tol=6.22
2024-07-28 07:38:58,634 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=77.2 pTM=0.547 ipTM=0.232 tol=3.36
2024-07-28 07:39:12,034 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=76.8 pTM=0.549 ipTM=0.238 tol=2.18
2024-07-28 07:39:25,402 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=76.9 pTM=0.561 ipTM=0.253 tol=2.64
2024-07-28 07:39:38,811 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=77.2 pTM=0.577 ipTM=0.286 tol=4.04
2024-07-28 07:39:52,204 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=77.2 pTM=0.589 ipTM=0.311 tol=2.79
2024-07-28 07:40:05,611 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.1 pTM=0.593 ipTM=0.32 tol=2.85
2024-07-28 07:40:19,039 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=77.9 pTM=0.602 ipTM=0.331 tol=2.43
2024-07-28 07:40:32,439 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=77.6 pTM=0.572 ipTM=0.275 tol=3.37
2024-07-28 07:40:45,820 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=77.1 pTM=0.582 ipTM=0.297 tol=2.59
2024-07-28 07:40:59,247 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=78.1 pTM=0.601 ipTM=0.335 tol=2.67
2024-07-28 07:40:59,248 alphafold2_multimer_v3_model_1_seed_000 took 590.4s (30 recycles)
2024-07-28 07:41:13,113 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=76.1 pTM=0.531 ipTM=0.218
2024-07-28 07:41:26,607 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=76.5 pTM=0.535 ipTM=0.247 tol=7.66
2024-07-28 07:41:40,104 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.4 pTM=0.534 ipTM=0.203 tol=4.42
2024-07-28 07:41:53,586 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78 pTM=0.539 ipTM=0.203 tol=5.34
2024-07-28 07:42:07,064 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.7 pTM=0.568 ipTM=0.275 tol=5.13
2024-07-28 07:42:20,544 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.8 pTM=0.555 ipTM=0.25 tol=2.28
2024-07-28 07:42:34,024 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.6 pTM=0.556 ipTM=0.226 tol=2.74
2024-07-28 07:42:47,521 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=79 pTM=0.556 ipTM=0.22 tol=6.28
2024-07-28 07:43:01,010 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=79.8 pTM=0.596 ipTM=0.322 tol=5.04
2024-07-28 07:43:14,489 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=79.4 pTM=0.557 ipTM=0.226 tol=5.89
2024-07-28 07:43:27,980 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=79.5 pTM=0.561 ipTM=0.227 tol=1.77
2024-07-28 07:43:41,469 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.4 pTM=0.623 ipTM=0.38 tol=1.72
2024-07-28 07:43:54,970 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.4 pTM=0.602 ipTM=0.333 tol=0.625
2024-07-28 07:44:08,467 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=79.6 pTM=0.56 ipTM=0.22 tol=1.98
2024-07-28 07:44:21,957 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=79.5 pTM=0.559 ipTM=0.225 tol=2.35
2024-07-28 07:44:35,438 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=79.9 pTM=0.587 ipTM=0.305 tol=2.28
2024-07-28 07:44:48,931 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=79.6 pTM=0.562 ipTM=0.238 tol=0.775
2024-07-28 07:45:02,424 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=79.4 pTM=0.557 ipTM=0.216 tol=1.14
2024-07-28 07:45:15,919 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=79.4 pTM=0.561 ipTM=0.229 tol=1.2
2024-07-28 07:45:29,401 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=79.9 pTM=0.603 ipTM=0.341 tol=2.16
2024-07-28 07:45:42,896 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=79.5 pTM=0.554 ipTM=0.217 tol=1.24
2024-07-28 07:45:56,385 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=79.5 pTM=0.566 ipTM=0.239 tol=1.39
2024-07-28 07:46:09,874 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.7 pTM=0.65 ipTM=0.433 tol=1.59
2024-07-28 07:46:23,404 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80 pTM=0.574 ipTM=0.274 tol=1.02
2024-07-28 07:46:36,908 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=79.9 pTM=0.576 ipTM=0.255 tol=1.1
2024-07-28 07:46:50,416 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.8 pTM=0.655 ipTM=0.446 tol=1.6
2024-07-28 07:47:03,928 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=80.1 pTM=0.577 ipTM=0.275 tol=1.53
2024-07-28 07:47:17,443 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=79.9 pTM=0.572 ipTM=0.244 tol=1.08
2024-07-28 07:47:30,956 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.2 pTM=0.598 ipTM=0.316 tol=1.14
2024-07-28 07:47:44,456 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=80 pTM=0.576 ipTM=0.273 tol=0.761
2024-07-28 07:47:57,944 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=79.9 pTM=0.572 ipTM=0.25 tol=1.08
2024-07-28 07:47:57,945 alphafold2_multimer_v3_model_2_seed_000 took 418.3s (30 recycles)
2024-07-28 07:48:11,809 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.8 pTM=0.579 ipTM=0.333
2024-07-28 07:48:25,332 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.8 pTM=0.526 ipTM=0.205 tol=7.59
2024-07-28 07:48:38,819 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.5 pTM=0.527 ipTM=0.203 tol=5.59
2024-07-28 07:48:52,316 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=77.3 pTM=0.55 ipTM=0.233 tol=5.09
2024-07-28 07:49:05,803 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=78.4 pTM=0.566 ipTM=0.236 tol=1.78
2024-07-28 07:49:19,298 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=77.9 pTM=0.558 ipTM=0.233 tol=3.07
2024-07-28 07:49:32,779 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=78.4 pTM=0.566 ipTM=0.225 tol=2.57
2024-07-28 07:49:46,286 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=78.4 pTM=0.56 ipTM=0.228 tol=3.39
2024-07-28 07:49:59,754 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=78.7 pTM=0.572 ipTM=0.234 tol=3.65
2024-07-28 07:50:13,230 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=78.5 pTM=0.568 ipTM=0.244 tol=2.3
2024-07-28 07:50:26,697 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=78 pTM=0.584 ipTM=0.26 tol=2.53
2024-07-28 07:50:40,168 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=79 pTM=0.558 ipTM=0.215 tol=4.02
2024-07-28 07:50:53,634 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=78.1 pTM=0.596 ipTM=0.281 tol=3.98
2024-07-28 07:51:07,113 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=78.9 pTM=0.556 ipTM=0.211 tol=4.1
2024-07-28 07:51:20,603 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=78.8 pTM=0.562 ipTM=0.219 tol=2.65
2024-07-28 07:51:34,100 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=78.6 pTM=0.577 ipTM=0.243 tol=4.54
2024-07-28 07:51:47,593 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=79.2 pTM=0.566 ipTM=0.221 tol=3.11
2024-07-28 07:52:01,056 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=78.2 pTM=0.589 ipTM=0.262 tol=2.63
2024-07-28 07:52:14,538 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.1 pTM=0.563 ipTM=0.219 tol=2.67
2024-07-28 07:52:28,017 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=77.9 pTM=0.596 ipTM=0.279 tol=2.61
2024-07-28 07:52:41,523 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=79 pTM=0.569 ipTM=0.228 tol=1.9
2024-07-28 07:52:55,007 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=78.2 pTM=0.584 ipTM=0.254 tol=1.58
2024-07-28 07:53:08,470 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=78.9 pTM=0.563 ipTM=0.221 tol=1.47
2024-07-28 07:53:21,946 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=78.4 pTM=0.57 ipTM=0.229 tol=1.32
2024-07-28 07:53:35,427 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=78.9 pTM=0.576 ipTM=0.241 tol=2.32
2024-07-28 07:53:48,916 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78.8 pTM=0.576 ipTM=0.246 tol=0.462
2024-07-28 07:53:48,917 alphafold2_multimer_v3_model_3_seed_000 took 350.6s (25 recycles)
2024-07-28 07:54:02,812 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=75.2 pTM=0.529 ipTM=0.218
2024-07-28 07:54:16,341 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=75.6 pTM=0.512 ipTM=0.181 tol=6.1
2024-07-28 07:54:29,867 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=76.1 pTM=0.505 ipTM=0.161 tol=3.43
2024-07-28 07:54:43,385 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.9 pTM=0.513 ipTM=0.178 tol=3.85
2024-07-28 07:54:56,901 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=76.9 pTM=0.518 ipTM=0.169 tol=3.36
2024-07-28 07:55:10,399 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=77.6 pTM=0.522 ipTM=0.168 tol=3.63
2024-07-28 07:55:23,895 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=77.9 pTM=0.529 ipTM=0.18 tol=2.62
2024-07-28 07:55:37,384 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78 pTM=0.535 ipTM=0.191 tol=1.03
2024-07-28 07:55:50,853 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78 pTM=0.533 ipTM=0.186 tol=1.58
2024-07-28 07:56:04,319 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77.8 pTM=0.534 ipTM=0.183 tol=0.928
2024-07-28 07:56:17,803 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=78 pTM=0.535 ipTM=0.187 tol=1.07
2024-07-28 07:56:31,276 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=78.2 pTM=0.536 ipTM=0.186 tol=0.948
2024-07-28 07:56:44,749 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=78.2 pTM=0.538 ipTM=0.19 tol=0.972
2024-07-28 07:56:58,219 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=78.1 pTM=0.538 ipTM=0.194 tol=0.678
2024-07-28 07:57:11,679 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.9 pTM=0.534 ipTM=0.188 tol=0.858
2024-07-28 07:57:25,156 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=78.2 pTM=0.531 ipTM=0.179 tol=1.2
2024-07-28 07:57:38,649 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=78.2 pTM=0.536 ipTM=0.187 tol=1.61
2024-07-28 07:57:52,120 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=78.1 pTM=0.532 ipTM=0.182 tol=2.26
2024-07-28 07:58:05,585 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=78.1 pTM=0.53 ipTM=0.173 tol=1.25
2024-07-28 07:58:19,070 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=78.1 pTM=0.529 ipTM=0.176 tol=1.68
2024-07-28 07:58:32,549 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=78.2 pTM=0.531 ipTM=0.179 tol=1.95
2024-07-28 07:58:46,032 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=78.3 pTM=0.532 ipTM=0.183 tol=1.52
2024-07-28 07:58:59,503 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=78.2 pTM=0.535 ipTM=0.188 tol=2.05
2024-07-28 07:59:12,995 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=78.7 pTM=0.532 ipTM=0.175 tol=3.14
2024-07-28 07:59:26,480 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=78.6 pTM=0.536 ipTM=0.179 tol=2.28
2024-07-28 07:59:39,961 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=78.4 pTM=0.531 ipTM=0.178 tol=1.52
2024-07-28 07:59:53,419 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=78.2 pTM=0.539 ipTM=0.199 tol=3.54
2024-07-28 08:00:06,903 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=79 pTM=0.531 ipTM=0.171 tol=4.22
2024-07-28 08:00:20,369 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=78.6 pTM=0.533 ipTM=0.175 tol=1.99
2024-07-28 08:00:33,866 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=78.6 pTM=0.531 ipTM=0.174 tol=1.45
2024-07-28 08:00:47,331 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=78.4 pTM=0.533 ipTM=0.176 tol=1.16
2024-07-28 08:00:47,332 alphafold2_multimer_v3_model_4_seed_000 took 418.0s (30 recycles)
2024-07-28 08:01:01,169 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=75.2 pTM=0.567 ipTM=0.302
2024-07-28 08:01:14,685 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=75.8 pTM=0.518 ipTM=0.187 tol=4.84
2024-07-28 08:01:28,194 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.2 pTM=0.514 ipTM=0.176 tol=5.11
2024-07-28 08:01:41,696 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=76.6 pTM=0.52 ipTM=0.181 tol=7.82
2024-07-28 08:01:55,201 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=77.8 pTM=0.539 ipTM=0.191 tol=5.16
2024-07-28 08:02:08,692 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.9 pTM=0.534 ipTM=0.187 tol=1.67
2024-07-28 08:02:22,197 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77.9 pTM=0.544 ipTM=0.195 tol=2.3
2024-07-28 08:02:35,721 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.5 pTM=0.54 ipTM=0.186 tol=3.68
2024-07-28 08:02:49,239 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.4 pTM=0.548 ipTM=0.194 tol=3.97
2024-07-28 08:03:02,763 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=78.5 pTM=0.542 ipTM=0.19 tol=3.31
2024-07-28 08:03:16,288 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78.5 pTM=0.549 ipTM=0.193 tol=3.04
2024-07-28 08:03:29,831 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.9 pTM=0.545 ipTM=0.19 tol=4.28
2024-07-28 08:03:43,367 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=78.6 pTM=0.548 ipTM=0.197 tol=5.16
2024-07-28 08:03:56,876 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78.8 pTM=0.546 ipTM=0.196 tol=2.13
2024-07-28 08:04:10,392 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78.6 pTM=0.55 ipTM=0.203 tol=3.85
2024-07-28 08:04:23,918 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.8 pTM=0.553 ipTM=0.203 tol=1.89
2024-07-28 08:04:37,434 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=78.9 pTM=0.553 ipTM=0.206 tol=2.55
2024-07-28 08:04:50,951 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.6 pTM=0.551 ipTM=0.202 tol=2.36
2024-07-28 08:05:04,472 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.5 pTM=0.556 ipTM=0.213 tol=1.67
2024-07-28 08:05:17,984 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=78.6 pTM=0.565 ipTM=0.232 tol=2.62
2024-07-28 08:05:31,493 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=78.4 pTM=0.554 ipTM=0.21 tol=3.31
2024-07-28 08:05:45,004 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.5 pTM=0.555 ipTM=0.217 tol=1.38
2024-07-28 08:05:58,510 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.4 pTM=0.553 ipTM=0.207 tol=1.62
2024-07-28 08:06:12,027 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=78.8 pTM=0.554 ipTM=0.203 tol=1.22
2024-07-28 08:06:25,560 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=78.6 pTM=0.558 ipTM=0.212 tol=2.5
2024-07-28 08:06:39,048 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=78.5 pTM=0.565 ipTM=0.229 tol=3.82
2024-07-28 08:06:52,543 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=78.6 pTM=0.557 ipTM=0.21 tol=3.16
2024-07-28 08:07:06,035 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=78.5 pTM=0.557 ipTM=0.216 tol=1.62
2024-07-28 08:07:19,530 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=78.6 pTM=0.552 ipTM=0.204 tol=2.62
2024-07-28 08:07:33,041 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=78.9 pTM=0.552 ipTM=0.205 tol=1.5
2024-07-28 08:07:46,513 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=78.7 pTM=0.556 ipTM=0.209 tol=3.77
2024-07-28 08:07:46,513 alphafold2_multimer_v3_model_5_seed_000 took 418.8s (30 recycles)
2024-07-28 08:07:46,911 reranking models by 'multimer' metric
2024-07-28 08:07:47,976 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 08:08:50,237 Relaxation took 63.3s
2024-07-28 08:08:50,237 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=78.1 pTM=0.601 ipTM=0.335
2024-07-28 08:10:05,019 Relaxation took 74.8s
2024-07-28 08:10:05,020 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=79.9 pTM=0.572 ipTM=0.25
2024-07-28 08:11:50,398 Relaxation took 105.4s
2024-07-28 08:11:50,398 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=78.8 pTM=0.576 ipTM=0.246
2024-07-28 08:12:39,308 Relaxation took 48.9s
2024-07-28 08:12:39,309 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=78.7 pTM=0.556 ipTM=0.209
2024-07-28 08:13:29,991 Relaxation took 50.7s
2024-07-28 08:13:29,991 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=78.4 pTM=0.533 ipTM=0.176
2024-07-28 08:13:31,587 Done