2024-07-28 07:37:24,213 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 07:37:24,529 Running on GPU
2024-07-28 07:37:27,856 Found 6 citations for tools or databases
2024-07-28 07:37:27,856 Query 1/1: USP18_FBXL8 (length 746)
2024-07-28 07:37:28,325 Sleeping for 9s. Reason: PENDING
2024-07-28 07:37:37,746 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:37:43,188 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:37:51,608 Sleeping for 9s. Reason: RUNNING
2024-07-28 07:38:01,052 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:38:07,466 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:38:17,897 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:38:26,340 Sleeping for 6s. Reason: RUNNING
2024-07-28 07:38:32,770 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:38:43,215 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:38:53,633 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:39:02,069 Sleeping for 5s. Reason: RUNNING
2024-07-28 07:39:07,538 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:39:15,951 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:39:24,382 Sleeping for 7s. Reason: RUNNING
2024-07-28 07:39:31,811 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:39:43,865 Sleeping for 7s. Reason: PENDING
2024-07-28 07:39:51,283 Sleeping for 10s. Reason: RUNNING
2024-07-28 07:40:01,717 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:40:10,169 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:40:18,596 Sleeping for 9s. Reason: RUNNING
2024-07-28 07:40:28,009 Sleeping for 7s. Reason: RUNNING
2024-07-28 07:40:35,429 Sleeping for 8s. Reason: RUNNING
2024-07-28 07:40:46,348 Setting max_seq=508, max_extra_seq=2048
2024-07-28 07:43:49,915 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=77.9 pTM=0.564 ipTM=0.244
2024-07-28 07:44:01,122 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=78.5 pTM=0.751 ipTM=0.681 tol=7.78
2024-07-28 07:44:12,318 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=78.4 pTM=0.538 ipTM=0.247 tol=5.06
2024-07-28 07:44:23,526 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=78.3 pTM=0.529 ipTM=0.276 tol=2.28
2024-07-28 07:44:34,746 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=78.4 pTM=0.536 ipTM=0.286 tol=1.53
2024-07-28 07:44:45,982 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=78.1 pTM=0.535 ipTM=0.298 tol=5.03
2024-07-28 07:44:57,233 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=78.2 pTM=0.533 ipTM=0.262 tol=4.37
2024-07-28 07:45:08,493 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=78.3 pTM=0.548 ipTM=0.223 tol=2.61
2024-07-28 07:45:19,776 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=78.5 pTM=0.54 ipTM=0.216 tol=1.56
2024-07-28 07:45:31,070 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=78.2 pTM=0.544 ipTM=0.225 tol=2.43
2024-07-28 07:45:42,348 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=78.8 pTM=0.542 ipTM=0.238 tol=6.21
2024-07-28 07:45:53,648 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=78.9 pTM=0.54 ipTM=0.235 tol=1.76
2024-07-28 07:46:04,944 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=78.7 pTM=0.541 ipTM=0.252 tol=1.71
2024-07-28 07:46:16,254 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=78.4 pTM=0.534 ipTM=0.244 tol=4.37
2024-07-28 07:46:27,560 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=78.8 pTM=0.553 ipTM=0.235 tol=5.57
2024-07-28 07:46:38,878 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=78.6 pTM=0.551 ipTM=0.225 tol=1.22
2024-07-28 07:46:50,170 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=78.3 pTM=0.545 ipTM=0.223 tol=3.69
2024-07-28 07:47:01,466 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=78.1 pTM=0.542 ipTM=0.207 tol=2.22
2024-07-28 07:47:12,769 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=78.4 pTM=0.539 ipTM=0.204 tol=1.74
2024-07-28 07:47:24,090 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=78.3 pTM=0.536 ipTM=0.195 tol=1.27
2024-07-28 07:47:35,386 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=78.2 pTM=0.537 ipTM=0.203 tol=1.3
2024-07-28 07:47:46,682 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=78 pTM=0.532 ipTM=0.194 tol=1.99
2024-07-28 07:47:57,985 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=78.4 pTM=0.538 ipTM=0.204 tol=1.48
2024-07-28 07:48:09,299 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=78.2 pTM=0.536 ipTM=0.194 tol=1.17
2024-07-28 07:48:20,609 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=78.2 pTM=0.535 ipTM=0.196 tol=1.64
2024-07-28 07:48:31,919 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=78.1 pTM=0.536 ipTM=0.195 tol=2.01
2024-07-28 07:48:43,227 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=78.6 pTM=0.537 ipTM=0.192 tol=2.29
2024-07-28 07:48:54,554 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=78.4 pTM=0.538 ipTM=0.195 tol=5.5
2024-07-28 07:49:05,860 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=78.8 pTM=0.541 ipTM=0.209 tol=2.25
2024-07-28 07:49:17,173 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=78.8 pTM=0.54 ipTM=0.193 tol=1.72
2024-07-28 07:49:28,508 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=80.1 pTM=0.558 ipTM=0.22 tol=7.5
2024-07-28 07:49:28,509 alphafold2_multimer_v3_model_1_seed_000 took 516.6s (30 recycles)
2024-07-28 07:49:40,213 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=78.6 pTM=0.566 ipTM=0.237
2024-07-28 07:49:51,583 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=79.2 pTM=0.552 ipTM=0.211 tol=1.63
2024-07-28 07:50:02,923 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=79.4 pTM=0.553 ipTM=0.21 tol=5.65
2024-07-28 07:50:14,281 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=79.8 pTM=0.549 ipTM=0.206 tol=3.34
2024-07-28 07:50:25,639 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=80.4 pTM=0.552 ipTM=0.203 tol=3.31
2024-07-28 07:50:36,993 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=80.4 pTM=0.544 ipTM=0.192 tol=2.13
2024-07-28 07:50:48,357 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=80.6 pTM=0.555 ipTM=0.214 tol=3.1
2024-07-28 07:50:59,710 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=80.8 pTM=0.555 ipTM=0.209 tol=5.97
2024-07-28 07:51:11,079 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=80.6 pTM=0.546 ipTM=0.2 tol=5.22
2024-07-28 07:51:22,454 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=80.6 pTM=0.557 ipTM=0.213 tol=2.57
2024-07-28 07:51:33,808 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=80.9 pTM=0.562 ipTM=0.224 tol=2.83
2024-07-28 07:51:45,159 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=80.6 pTM=0.549 ipTM=0.2 tol=1.91
2024-07-28 07:51:56,505 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=80.6 pTM=0.552 ipTM=0.205 tol=2.86
2024-07-28 07:52:07,874 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=81.1 pTM=0.561 ipTM=0.223 tol=3.87
2024-07-28 07:52:19,253 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=80.8 pTM=0.547 ipTM=0.193 tol=1.52
2024-07-28 07:52:30,601 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=80.8 pTM=0.563 ipTM=0.231 tol=2.13
2024-07-28 07:52:41,956 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=80.9 pTM=0.552 ipTM=0.206 tol=2.69
2024-07-28 07:52:53,305 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=80.6 pTM=0.553 ipTM=0.216 tol=3.41
2024-07-28 07:53:04,662 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=80.9 pTM=0.554 ipTM=0.212 tol=1.38
2024-07-28 07:53:16,007 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=80.9 pTM=0.568 ipTM=0.236 tol=1.16
2024-07-28 07:53:27,361 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=80.9 pTM=0.56 ipTM=0.219 tol=1.81
2024-07-28 07:53:38,705 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=81 pTM=0.572 ipTM=0.25 tol=1.58
2024-07-28 07:53:50,070 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=80.9 pTM=0.553 ipTM=0.209 tol=1.28
2024-07-28 07:54:01,423 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=80.8 pTM=0.552 ipTM=0.21 tol=2.48
2024-07-28 07:54:12,782 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=80.8 pTM=0.565 ipTM=0.236 tol=0.991
2024-07-28 07:54:24,127 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=80.9 pTM=0.551 ipTM=0.207 tol=3.41
2024-07-28 07:54:35,492 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=80.8 pTM=0.553 ipTM=0.214 tol=2.66
2024-07-28 07:54:46,852 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=80.9 pTM=0.556 ipTM=0.217 tol=2.71
2024-07-28 07:54:58,230 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=80.9 pTM=0.547 ipTM=0.193 tol=2.28
2024-07-28 07:55:09,586 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=80.7 pTM=0.556 ipTM=0.217 tol=2.44
2024-07-28 07:55:20,936 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=81.1 pTM=0.555 ipTM=0.211 tol=2.22
2024-07-28 07:55:20,937 alphafold2_multimer_v3_model_2_seed_000 took 352.1s (30 recycles)
2024-07-28 07:55:32,599 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77.8 pTM=0.565 ipTM=0.249
2024-07-28 07:55:43,922 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=78.7 pTM=0.54 ipTM=0.196 tol=6.18
2024-07-28 07:55:55,199 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=78.2 pTM=0.547 ipTM=0.212 tol=7.98
2024-07-28 07:56:06,500 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=79.1 pTM=0.535 ipTM=0.177 tol=6.14
2024-07-28 07:56:17,781 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80.4 pTM=0.567 ipTM=0.225 tol=5.07
2024-07-28 07:56:29,086 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=81.1 pTM=0.553 ipTM=0.191 tol=4.41
2024-07-28 07:56:40,376 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.8 pTM=0.563 ipTM=0.213 tol=3.75
2024-07-28 07:56:51,679 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=81.3 pTM=0.552 ipTM=0.188 tol=2.66
2024-07-28 07:57:02,963 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=81 pTM=0.566 ipTM=0.215 tol=4.57
2024-07-28 07:57:14,276 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=81.2 pTM=0.55 ipTM=0.182 tol=3.51
2024-07-28 07:57:25,582 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=81.2 pTM=0.569 ipTM=0.215 tol=2.55
2024-07-28 07:57:36,902 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=81.3 pTM=0.552 ipTM=0.185 tol=3.15
2024-07-28 07:57:48,203 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=81.2 pTM=0.572 ipTM=0.23 tol=3.18
2024-07-28 07:57:59,525 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=81.1 pTM=0.547 ipTM=0.174 tol=2.85
2024-07-28 07:58:10,824 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=80.9 pTM=0.567 ipTM=0.215 tol=4.05
2024-07-28 07:58:22,126 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=80.9 pTM=0.55 ipTM=0.183 tol=3.97
2024-07-28 07:58:33,420 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=80.5 pTM=0.548 ipTM=0.183 tol=2.98
2024-07-28 07:58:44,709 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=81 pTM=0.556 ipTM=0.193 tol=1.84
2024-07-28 07:58:55,993 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=80.4 pTM=0.557 ipTM=0.198 tol=3.06
2024-07-28 07:59:07,303 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=80.9 pTM=0.553 ipTM=0.184 tol=2.64
2024-07-28 07:59:18,610 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=80.9 pTM=0.55 ipTM=0.186 tol=2.56
2024-07-28 07:59:29,907 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=81.2 pTM=0.564 ipTM=0.208 tol=2.72
2024-07-28 07:59:41,218 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=80.5 pTM=0.55 ipTM=0.186 tol=2.21
2024-07-28 07:59:52,508 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=81.1 pTM=0.561 ipTM=0.203 tol=1.62
2024-07-28 08:00:03,796 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=80.5 pTM=0.559 ipTM=0.2 tol=2.23
2024-07-28 08:00:15,108 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=80.9 pTM=0.556 ipTM=0.192 tol=2.7
2024-07-28 08:00:26,404 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=80.8 pTM=0.547 ipTM=0.178 tol=2.91
2024-07-28 08:00:37,712 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=81.2 pTM=0.565 ipTM=0.209 tol=3
2024-07-28 08:00:48,988 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=80.8 pTM=0.57 ipTM=0.219 tol=2.07
2024-07-28 08:01:00,278 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=80.1 pTM=0.554 ipTM=0.191 tol=4.68
2024-07-28 08:01:11,586 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=81.2 pTM=0.546 ipTM=0.177 tol=5.4
2024-07-28 08:01:11,587 alphafold2_multimer_v3_model_3_seed_000 took 350.3s (30 recycles)
2024-07-28 08:01:23,266 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=76.8 pTM=0.542 ipTM=0.209
2024-07-28 08:01:34,618 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=77.2 pTM=0.539 ipTM=0.207 tol=4
2024-07-28 08:01:45,931 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=77.4 pTM=0.547 ipTM=0.225 tol=9.76
2024-07-28 08:01:57,268 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=78.5 pTM=0.521 ipTM=0.169 tol=5.34
2024-07-28 08:02:08,593 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=78 pTM=0.532 ipTM=0.185 tol=5.2
2024-07-28 08:02:19,916 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=78.2 pTM=0.534 ipTM=0.185 tol=1.44
2024-07-28 08:02:31,244 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=78.6 pTM=0.531 ipTM=0.18 tol=2.19
2024-07-28 08:02:42,588 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=78.5 pTM=0.531 ipTM=0.178 tol=1.07
2024-07-28 08:02:53,917 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=78.6 pTM=0.535 ipTM=0.18 tol=1.22
2024-07-28 08:03:05,246 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=79.1 pTM=0.545 ipTM=0.186 tol=1.57
2024-07-28 08:03:16,596 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=79.2 pTM=0.543 ipTM=0.179 tol=2.31
2024-07-28 08:03:27,923 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=79.4 pTM=0.55 ipTM=0.195 tol=3.19
2024-07-28 08:03:39,264 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=79.4 pTM=0.541 ipTM=0.174 tol=2.38
2024-07-28 08:03:50,607 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=79.8 pTM=0.55 ipTM=0.193 tol=2.33
2024-07-28 08:04:01,973 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=79.7 pTM=0.543 ipTM=0.177 tol=3.05
2024-07-28 08:04:13,300 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=79.9 pTM=0.556 ipTM=0.209 tol=3.27
2024-07-28 08:04:24,665 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=80.1 pTM=0.542 ipTM=0.176 tol=2.71
2024-07-28 08:04:35,992 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=79.2 pTM=0.546 ipTM=0.192 tol=3.85
2024-07-28 08:04:47,341 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=79.3 pTM=0.543 ipTM=0.178 tol=2.6
2024-07-28 08:04:58,671 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=79.6 pTM=0.549 ipTM=0.195 tol=2.39
2024-07-28 08:05:09,995 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=79.8 pTM=0.544 ipTM=0.182 tol=1.33
2024-07-28 08:05:21,330 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=79.2 pTM=0.549 ipTM=0.196 tol=0.998
2024-07-28 08:05:32,656 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=79.1 pTM=0.544 ipTM=0.183 tol=2.64
2024-07-28 08:05:43,981 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=79.7 pTM=0.551 ipTM=0.196 tol=2.28
2024-07-28 08:05:55,328 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=80.1 pTM=0.547 ipTM=0.185 tol=3.06
2024-07-28 08:06:06,653 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=79.2 pTM=0.547 ipTM=0.19 tol=4.16
2024-07-28 08:06:17,985 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=79.1 pTM=0.546 ipTM=0.184 tol=3.57
2024-07-28 08:06:29,328 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=79.4 pTM=0.555 ipTM=0.204 tol=3.63
2024-07-28 08:06:40,700 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=79.9 pTM=0.543 ipTM=0.176 tol=4.28
2024-07-28 08:06:52,032 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=79.6 pTM=0.553 ipTM=0.201 tol=3.4
2024-07-28 08:07:03,362 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=79.5 pTM=0.547 ipTM=0.187 tol=3.31
2024-07-28 08:07:03,363 alphafold2_multimer_v3_model_4_seed_000 took 351.4s (30 recycles)
2024-07-28 08:07:15,044 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=77.1 pTM=0.564 ipTM=0.249
2024-07-28 08:07:26,396 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=77.1 pTM=0.532 ipTM=0.195 tol=3.9
2024-07-28 08:07:37,711 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.7 pTM=0.527 ipTM=0.185 tol=6.32
2024-07-28 08:07:49,027 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.4 pTM=0.528 ipTM=0.181 tol=2.03
2024-07-28 08:08:00,335 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=77.7 pTM=0.539 ipTM=0.193 tol=3.15
2024-07-28 08:08:11,667 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=78.5 pTM=0.54 ipTM=0.199 tol=1.68
2024-07-28 08:08:22,991 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=78.4 pTM=0.539 ipTM=0.19 tol=1.42
2024-07-28 08:08:34,313 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=78.6 pTM=0.552 ipTM=0.204 tol=2.53
2024-07-28 08:08:45,677 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78.9 pTM=0.542 ipTM=0.188 tol=6.65
2024-07-28 08:08:57,009 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=79.1 pTM=0.552 ipTM=0.202 tol=3.45
2024-07-28 08:09:08,364 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=79.4 pTM=0.548 ipTM=0.194 tol=2.7
2024-07-28 08:09:19,679 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=79.2 pTM=0.554 ipTM=0.204 tol=3.75
2024-07-28 08:09:31,016 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=79.4 pTM=0.544 ipTM=0.189 tol=5.55
2024-07-28 08:09:42,353 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=79.1 pTM=0.548 ipTM=0.194 tol=4.02
2024-07-28 08:09:53,717 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=79.3 pTM=0.541 ipTM=0.18 tol=1.97
2024-07-28 08:10:05,057 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=79.1 pTM=0.548 ipTM=0.194 tol=4.38
2024-07-28 08:10:16,383 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=79.1 pTM=0.539 ipTM=0.177 tol=3.8
2024-07-28 08:10:27,682 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.8 pTM=0.552 ipTM=0.204 tol=3.67
2024-07-28 08:10:39,027 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=79.1 pTM=0.535 ipTM=0.17 tol=2.97
2024-07-28 08:10:50,352 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=79.1 pTM=0.545 ipTM=0.188 tol=2.85
2024-07-28 08:11:01,677 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=78.9 pTM=0.541 ipTM=0.182 tol=2.88
2024-07-28 08:11:13,005 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.9 pTM=0.545 ipTM=0.194 tol=3.35
2024-07-28 08:11:24,343 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.8 pTM=0.541 ipTM=0.182 tol=3.57
2024-07-28 08:11:35,668 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=79.2 pTM=0.549 ipTM=0.192 tol=2.91
2024-07-28 08:11:47,015 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=79.2 pTM=0.539 ipTM=0.178 tol=4.05
2024-07-28 08:11:58,344 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=79.3 pTM=0.551 ipTM=0.201 tol=2.92
2024-07-28 08:12:09,658 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=79.2 pTM=0.536 ipTM=0.175 tol=2.15
2024-07-28 08:12:20,980 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=79.2 pTM=0.553 ipTM=0.205 tol=2.89
2024-07-28 08:12:32,303 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=79.6 pTM=0.542 ipTM=0.181 tol=3.77
2024-07-28 08:12:43,630 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=79.2 pTM=0.561 ipTM=0.221 tol=3.82
2024-07-28 08:12:54,961 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=79.2 pTM=0.538 ipTM=0.177 tol=2.49
2024-07-28 08:12:54,962 alphafold2_multimer_v3_model_5_seed_000 took 351.2s (30 recycles)
2024-07-28 08:12:55,317 reranking models by 'multimer' metric
2024-07-28 08:12:56,384 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 08:14:10,748 Relaxation took 75.4s
2024-07-28 08:14:10,749 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=80.1 pTM=0.558 ipTM=0.22
2024-07-28 08:14:34,601 Relaxation took 23.9s
2024-07-28 08:14:34,601 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=81.1 pTM=0.555 ipTM=0.211
2024-07-28 08:15:42,003 Relaxation took 67.4s
2024-07-28 08:15:42,003 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=79.5 pTM=0.547 ipTM=0.187
2024-07-28 08:16:42,505 Relaxation took 60.5s
2024-07-28 08:16:42,505 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=81.2 pTM=0.546 ipTM=0.177
2024-07-28 08:17:21,476 Relaxation took 39.0s
2024-07-28 08:17:21,476 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=79.2 pTM=0.538 ipTM=0.177
2024-07-28 08:17:22,876 Done