2024-07-28 08:05:50,000 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 08:05:51,269 Running on GPU
2024-07-28 08:05:55,473 Found 6 citations for tools or databases
2024-07-28 08:05:55,473 Query 1/1: USP18_FBXO36 (length 560)
2024-07-28 08:05:55,942 Sleeping for 8s. Reason: PENDING
2024-07-28 08:06:04,372 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:06:10,805 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:06:21,240 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:06:29,678 Sleeping for 7s. Reason: RUNNING
2024-07-28 08:06:37,098 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:06:42,529 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:06:47,953 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:06:56,385 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:07:02,799 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:07:13,233 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:07:21,683 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:07:32,119 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:07:40,544 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:07:48,992 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:07:55,394 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:08:05,815 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:08:13,916 Sleeping for 8s. Reason: PENDING
2024-07-28 08:08:22,332 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:08:27,756 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:08:38,183 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:08:44,622 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:08:54,054 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:09:00,495 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:09:10,938 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:09:22,390 Setting max_seq=508, max_extra_seq=2048
2024-07-28 08:12:23,973 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.9 pTM=0.592 ipTM=0.147
2024-07-28 08:12:32,333 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.7 pTM=0.591 ipTM=0.132 tol=7.64
2024-07-28 08:12:40,685 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.4 pTM=0.601 ipTM=0.159 tol=5.69
2024-07-28 08:12:49,039 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72 pTM=0.604 ipTM=0.16 tol=4.1
2024-07-28 08:12:57,389 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=71.5 pTM=0.603 ipTM=0.161 tol=3.55
2024-07-28 08:13:05,736 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.1 pTM=0.604 ipTM=0.162 tol=2.26
2024-07-28 08:13:14,086 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=71.5 pTM=0.606 ipTM=0.17 tol=2.29
2024-07-28 08:13:22,441 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.9 pTM=0.608 ipTM=0.17 tol=5.71
2024-07-28 08:13:30,801 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.2 pTM=0.607 ipTM=0.172 tol=4.26
2024-07-28 08:13:39,164 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=71.4 pTM=0.608 ipTM=0.166 tol=4.37
2024-07-28 08:13:47,521 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=71.6 pTM=0.614 ipTM=0.189 tol=3.05
2024-07-28 08:13:55,878 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.1 pTM=0.609 ipTM=0.175 tol=4.1
2024-07-28 08:14:04,227 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.5 pTM=0.61 ipTM=0.177 tol=4.56
2024-07-28 08:14:12,568 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.1 pTM=0.611 ipTM=0.178 tol=5.6
2024-07-28 08:14:20,910 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71.5 pTM=0.619 ipTM=0.194 tol=2.56
2024-07-28 08:14:29,258 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=71.9 pTM=0.61 ipTM=0.173 tol=7.37
2024-07-28 08:14:37,611 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=71.5 pTM=0.609 ipTM=0.171 tol=4.73
2024-07-28 08:14:45,960 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=71.6 pTM=0.61 ipTM=0.172 tol=3.65
2024-07-28 08:14:54,314 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.7 pTM=0.613 ipTM=0.184 tol=3.99
2024-07-28 08:15:02,665 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.6 pTM=0.611 ipTM=0.175 tol=2.88
2024-07-28 08:15:11,010 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=71.6 pTM=0.612 ipTM=0.18 tol=3.08
2024-07-28 08:15:19,357 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=71.8 pTM=0.607 ipTM=0.165 tol=2.62
2024-07-28 08:15:27,708 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72 pTM=0.608 ipTM=0.169 tol=1.37
2024-07-28 08:15:36,054 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=71.1 pTM=0.605 ipTM=0.163 tol=3.47
2024-07-28 08:15:44,402 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=71.6 pTM=0.603 ipTM=0.154 tol=1.98
2024-07-28 08:15:52,748 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=71 pTM=0.604 ipTM=0.161 tol=2.76
2024-07-28 08:16:01,104 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=71.7 pTM=0.603 ipTM=0.154 tol=6.73
2024-07-28 08:16:09,455 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=71.2 pTM=0.603 ipTM=0.159 tol=4.27
2024-07-28 08:16:17,808 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.2 pTM=0.604 ipTM=0.159 tol=2.21
2024-07-28 08:16:26,163 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=71.2 pTM=0.604 ipTM=0.159 tol=3.82
2024-07-28 08:16:34,523 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=71.9 pTM=0.601 ipTM=0.151 tol=5.07
2024-07-28 08:16:34,524 alphafold2_multimer_v3_model_1_seed_000 took 410.9s (30 recycles)
2024-07-28 08:16:43,171 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=75.1 pTM=0.607 ipTM=0.212
2024-07-28 08:16:51,541 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=77.1 pTM=0.615 ipTM=0.198 tol=6.99
2024-07-28 08:16:59,906 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=76.1 pTM=0.605 ipTM=0.173 tol=4.06
2024-07-28 08:17:08,278 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=76.4 pTM=0.608 ipTM=0.187 tol=6.96
2024-07-28 08:17:16,640 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.6 pTM=0.612 ipTM=0.2 tol=6.79
2024-07-28 08:17:24,999 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=75.6 pTM=0.607 ipTM=0.179 tol=6.43
2024-07-28 08:17:33,367 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74.8 pTM=0.606 ipTM=0.177 tol=2.8
2024-07-28 08:17:41,734 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=74.7 pTM=0.613 ipTM=0.192 tol=2.17
2024-07-28 08:17:50,098 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=76.1 pTM=0.612 ipTM=0.192 tol=5.07
2024-07-28 08:17:58,469 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=75.5 pTM=0.614 ipTM=0.193 tol=2.39
2024-07-28 08:18:06,844 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=74.9 pTM=0.608 ipTM=0.185 tol=2.44
2024-07-28 08:18:15,206 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=75.1 pTM=0.612 ipTM=0.19 tol=2.43
2024-07-28 08:18:23,570 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=75.7 pTM=0.608 ipTM=0.183 tol=4.34
2024-07-28 08:18:31,928 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=76.7 pTM=0.617 ipTM=0.211 tol=5.57
2024-07-28 08:18:40,296 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=76.5 pTM=0.607 ipTM=0.18 tol=3.17
2024-07-28 08:18:48,661 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.4 pTM=0.607 ipTM=0.178 tol=6.07
2024-07-28 08:18:57,026 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.7 pTM=0.61 ipTM=0.182 tol=4.18
2024-07-28 08:19:05,384 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=75.4 pTM=0.611 ipTM=0.189 tol=3.99
2024-07-28 08:19:13,751 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=75.6 pTM=0.612 ipTM=0.186 tol=4.74
2024-07-28 08:19:22,113 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=75.3 pTM=0.612 ipTM=0.184 tol=4.41
2024-07-28 08:19:30,473 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=75.3 pTM=0.613 ipTM=0.189 tol=2.15
2024-07-28 08:19:38,834 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=75.2 pTM=0.607 ipTM=0.177 tol=3.92
2024-07-28 08:19:47,191 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=75 pTM=0.618 ipTM=0.204 tol=2.27
2024-07-28 08:19:55,553 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=75.4 pTM=0.61 ipTM=0.183 tol=2.1
2024-07-28 08:20:03,909 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.6 pTM=0.614 ipTM=0.188 tol=3.68
2024-07-28 08:20:12,265 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.3 pTM=0.61 ipTM=0.181 tol=1.73
2024-07-28 08:20:20,625 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.6 pTM=0.614 ipTM=0.188 tol=2.03
2024-07-28 08:20:28,985 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=75.1 pTM=0.609 ipTM=0.182 tol=3.02
2024-07-28 08:20:37,349 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.8 pTM=0.612 ipTM=0.186 tol=4.05
2024-07-28 08:20:45,716 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=75.5 pTM=0.614 ipTM=0.192 tol=2.7
2024-07-28 08:20:54,084 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.2 pTM=0.609 ipTM=0.177 tol=3.93
2024-07-28 08:20:54,084 alphafold2_multimer_v3_model_2_seed_000 took 259.3s (30 recycles)
2024-07-28 08:21:02,697 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.6 pTM=0.629 ipTM=0.286
2024-07-28 08:21:11,060 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=74.8 pTM=0.593 ipTM=0.144 tol=7.77
2024-07-28 08:21:19,412 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.8 pTM=0.59 ipTM=0.14 tol=6.59
2024-07-28 08:21:27,755 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.9 pTM=0.594 ipTM=0.149 tol=4.14
2024-07-28 08:21:36,101 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.1 pTM=0.594 ipTM=0.146 tol=3.55
2024-07-28 08:21:44,447 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.6 pTM=0.593 ipTM=0.144 tol=3.25
2024-07-28 08:21:52,787 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.1 pTM=0.599 ipTM=0.161 tol=5.5
2024-07-28 08:22:01,137 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=72.2 pTM=0.597 ipTM=0.155 tol=2.82
2024-07-28 08:22:09,477 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.1 pTM=0.6 ipTM=0.164 tol=3.44
2024-07-28 08:22:17,819 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.2 pTM=0.597 ipTM=0.15 tol=3.19
2024-07-28 08:22:26,156 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.2 pTM=0.604 ipTM=0.177 tol=4.76
2024-07-28 08:22:34,501 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=73.1 pTM=0.596 ipTM=0.15 tol=3.12
2024-07-28 08:22:42,832 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.4 pTM=0.602 ipTM=0.17 tol=3.11
2024-07-28 08:22:51,172 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=72.7 pTM=0.6 ipTM=0.161 tol=5.09
2024-07-28 08:22:59,507 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.5 pTM=0.605 ipTM=0.178 tol=3.89
2024-07-28 08:23:07,838 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.7 pTM=0.602 ipTM=0.164 tol=4.53
2024-07-28 08:23:16,179 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.4 pTM=0.6 ipTM=0.158 tol=7.66
2024-07-28 08:23:24,514 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=74.1 pTM=0.598 ipTM=0.156 tol=3.18
2024-07-28 08:23:32,857 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=73.2 pTM=0.598 ipTM=0.155 tol=5.28
2024-07-28 08:23:41,199 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=73 pTM=0.6 ipTM=0.16 tol=3.43
2024-07-28 08:23:49,537 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=72.8 pTM=0.597 ipTM=0.16 tol=1.85
2024-07-28 08:23:57,874 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=73.1 pTM=0.601 ipTM=0.167 tol=2.56
2024-07-28 08:24:06,209 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=73 pTM=0.6 ipTM=0.163 tol=3.74
2024-07-28 08:24:14,550 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=74.3 pTM=0.599 ipTM=0.157 tol=5.78
2024-07-28 08:24:22,879 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=74.9 pTM=0.602 ipTM=0.172 tol=2.56
2024-07-28 08:24:31,218 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=73.9 pTM=0.599 ipTM=0.159 tol=3.32
2024-07-28 08:24:39,560 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=74 pTM=0.598 ipTM=0.154 tol=2.75
2024-07-28 08:24:47,897 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=73.8 pTM=0.597 ipTM=0.152 tol=2.3
2024-07-28 08:24:56,233 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=73.8 pTM=0.594 ipTM=0.147 tol=1.74
2024-07-28 08:25:04,574 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=73.5 pTM=0.598 ipTM=0.155 tol=1.84
2024-07-28 08:25:12,907 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.9 pTM=0.592 ipTM=0.14 tol=4.96
2024-07-28 08:25:12,907 alphafold2_multimer_v3_model_3_seed_000 took 258.5s (30 recycles)
2024-07-28 08:25:21,538 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=72.2 pTM=0.591 ipTM=0.147
2024-07-28 08:25:29,909 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74 pTM=0.601 ipTM=0.149 tol=8.09
2024-07-28 08:25:38,255 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72.1 pTM=0.602 ipTM=0.158 tol=9.62
2024-07-28 08:25:46,601 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72 pTM=0.598 ipTM=0.142 tol=7.32
2024-07-28 08:25:54,942 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.6 pTM=0.61 ipTM=0.173 tol=6.79
2024-07-28 08:26:03,290 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.2 pTM=0.597 ipTM=0.137 tol=7.52
2024-07-28 08:26:11,637 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.3 pTM=0.604 ipTM=0.159 tol=5.74
2024-07-28 08:26:19,978 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.1 pTM=0.602 ipTM=0.154 tol=7.7
2024-07-28 08:26:28,327 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.1 pTM=0.605 ipTM=0.156 tol=7.12
2024-07-28 08:26:36,677 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.1 pTM=0.599 ipTM=0.137 tol=5.34
2024-07-28 08:26:45,024 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.6 pTM=0.613 ipTM=0.183 tol=5.02
2024-07-28 08:26:53,368 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.6 pTM=0.598 ipTM=0.137 tol=5.58
2024-07-28 08:27:01,711 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.3 pTM=0.609 ipTM=0.175 tol=3.08
2024-07-28 08:27:10,056 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.1 pTM=0.601 ipTM=0.146 tol=4.82
2024-07-28 08:27:18,404 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71 pTM=0.604 ipTM=0.155 tol=4.54
2024-07-28 08:27:26,748 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.4 pTM=0.6 ipTM=0.142 tol=5.78
2024-07-28 08:27:35,104 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.7 pTM=0.605 ipTM=0.161 tol=6.38
2024-07-28 08:27:43,449 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.9 pTM=0.601 ipTM=0.146 tol=6.16
2024-07-28 08:27:51,796 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.7 pTM=0.619 ipTM=0.2 tol=9.22
2024-07-28 08:28:00,143 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71.5 pTM=0.598 ipTM=0.143 tol=8.91
2024-07-28 08:28:08,488 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.1 pTM=0.604 ipTM=0.159 tol=5.85
2024-07-28 08:28:16,833 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=69.9 pTM=0.599 ipTM=0.143 tol=10.1
2024-07-28 08:28:25,181 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.3 pTM=0.612 ipTM=0.184 tol=9.65
2024-07-28 08:28:33,527 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.4 pTM=0.597 ipTM=0.136 tol=6.41
2024-07-28 08:28:41,867 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.9 pTM=0.607 ipTM=0.165 tol=4.86
2024-07-28 08:28:50,207 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.3 pTM=0.601 ipTM=0.151 tol=6.1
2024-07-28 08:28:58,553 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.2 pTM=0.607 ipTM=0.162 tol=5.89
2024-07-28 08:29:06,896 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=71.4 pTM=0.601 ipTM=0.146 tol=10.8
2024-07-28 08:29:15,243 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=71.1 pTM=0.607 ipTM=0.163 tol=9.7
2024-07-28 08:29:23,590 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72 pTM=0.596 ipTM=0.131 tol=4.37
2024-07-28 08:29:31,935 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.8 pTM=0.609 ipTM=0.172 tol=5.66
2024-07-28 08:29:31,936 alphafold2_multimer_v3_model_4_seed_000 took 258.7s (30 recycles)
2024-07-28 08:29:40,581 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.5 pTM=0.605 ipTM=0.2
2024-07-28 08:29:48,960 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.2 pTM=0.595 ipTM=0.137 tol=9.89
2024-07-28 08:29:57,336 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.8 pTM=0.594 ipTM=0.135 tol=5.56
2024-07-28 08:30:05,695 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.1 pTM=0.598 ipTM=0.157 tol=6.41
2024-07-28 08:30:14,067 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=74.1 pTM=0.594 ipTM=0.133 tol=9.57
2024-07-28 08:30:22,431 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=73.4 pTM=0.593 ipTM=0.134 tol=5.81
2024-07-28 08:30:30,792 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=73.5 pTM=0.593 ipTM=0.133 tol=2.98
2024-07-28 08:30:39,163 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=73.1 pTM=0.592 ipTM=0.129 tol=1.86
2024-07-28 08:30:47,521 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=73.7 pTM=0.591 ipTM=0.126 tol=3.81
2024-07-28 08:30:55,884 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=73.5 pTM=0.595 ipTM=0.134 tol=5.61
2024-07-28 08:31:04,249 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=73.2 pTM=0.595 ipTM=0.137 tol=4.82
2024-07-28 08:31:12,603 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=73.6 pTM=0.591 ipTM=0.128 tol=3.34
2024-07-28 08:31:20,962 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=73.8 pTM=0.592 ipTM=0.128 tol=4.48
2024-07-28 08:31:29,321 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=73.2 pTM=0.593 ipTM=0.133 tol=2.84
2024-07-28 08:31:37,678 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=74.5 pTM=0.595 ipTM=0.132 tol=3.75
2024-07-28 08:31:46,033 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=73.4 pTM=0.591 ipTM=0.129 tol=3.61
2024-07-28 08:31:54,389 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=73.9 pTM=0.593 ipTM=0.13 tol=2.35
2024-07-28 08:32:02,740 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=73.4 pTM=0.599 ipTM=0.15 tol=2.3
2024-07-28 08:32:11,110 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.8 pTM=0.595 ipTM=0.136 tol=2.75
2024-07-28 08:32:19,474 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.6 pTM=0.601 ipTM=0.156 tol=2.63
2024-07-28 08:32:27,833 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.5 pTM=0.598 ipTM=0.147 tol=1.95
2024-07-28 08:32:36,187 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=73.6 pTM=0.607 ipTM=0.177 tol=4.72
2024-07-28 08:32:44,555 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=72.9 pTM=0.598 ipTM=0.145 tol=3
2024-07-28 08:32:52,914 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=73.6 pTM=0.598 ipTM=0.149 tol=2.75
2024-07-28 08:33:01,279 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=73.3 pTM=0.599 ipTM=0.149 tol=1.89
2024-07-28 08:33:09,648 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=72.9 pTM=0.6 ipTM=0.155 tol=2.35
2024-07-28 08:33:18,016 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.9 pTM=0.599 ipTM=0.149 tol=3.76
2024-07-28 08:33:26,377 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=73.2 pTM=0.605 ipTM=0.17 tol=3.47
2024-07-28 08:33:34,740 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=73 pTM=0.602 ipTM=0.156 tol=3.78
2024-07-28 08:33:43,105 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=73.1 pTM=0.607 ipTM=0.174 tol=1.97
2024-07-28 08:33:51,462 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=73.8 pTM=0.609 ipTM=0.183 tol=1.96
2024-07-28 08:33:51,462 alphafold2_multimer_v3_model_5_seed_000 took 259.2s (30 recycles)
2024-07-28 08:33:51,764 reranking models by 'multimer' metric
2024-07-28 08:33:55,569 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 08:34:59,426 Relaxation took 67.7s
2024-07-28 08:34:59,426 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=73.8 pTM=0.609 ipTM=0.183
2024-07-28 08:35:50,901 Relaxation took 51.5s
2024-07-28 08:35:50,901 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.2 pTM=0.609 ipTM=0.177
2024-07-28 08:36:33,854 Relaxation took 43.0s
2024-07-28 08:36:33,855 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.8 pTM=0.609 ipTM=0.172
2024-07-28 08:37:38,730 Relaxation took 64.9s
2024-07-28 08:37:38,730 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=71.9 pTM=0.601 ipTM=0.151
2024-07-28 08:38:40,412 Relaxation took 61.7s
2024-07-28 08:38:40,412 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.9 pTM=0.592 ipTM=0.14
2024-07-28 08:38:41,898 Done