2024-07-28 08:13:42,674 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 08:13:42,984 Running on GPU
2024-07-28 08:13:43,720 Found 6 citations for tools or databases
2024-07-28 08:13:43,720 Query 1/1: VDR_FBXL12 (length 820)
2024-07-28 08:13:44,173 Sleeping for 8s. Reason: PENDING
2024-07-28 08:13:52,614 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:14:02,028 Sleeping for 7s. Reason: RUNNING
2024-07-28 08:14:09,452 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:14:18,892 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:14:25,317 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:14:30,751 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:14:36,185 Sleeping for 7s. Reason: RUNNING
2024-07-28 08:14:43,603 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:14:50,009 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:14:59,435 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:15:04,875 Sleeping for 7s. Reason: RUNNING
2024-07-28 08:15:12,308 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:15:18,737 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:15:24,152 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:15:35,279 Sleeping for 9s. Reason: PENDING
2024-07-28 08:15:44,715 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:15:51,124 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:15:56,560 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:16:05,992 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:16:16,429 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:16:24,851 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:16:34,262 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:16:42,696 Setting max_seq=508, max_extra_seq=2048
2024-07-28 08:19:25,054 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.1 pTM=0.47 ipTM=0.227
2024-07-28 08:19:38,748 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=72.5 pTM=0.496 ipTM=0.32 tol=9.94
2024-07-28 08:19:52,479 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.6 pTM=0.624 ipTM=0.69 tol=9.01
2024-07-28 08:20:06,252 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=76.4 pTM=0.638 ipTM=0.749 tol=1.98
2024-07-28 08:20:20,055 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76.3 pTM=0.626 ipTM=0.717 tol=1.18
2024-07-28 08:20:33,880 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.6 pTM=0.586 ipTM=0.62 tol=1.37
2024-07-28 08:20:47,718 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.4 pTM=0.574 ipTM=0.588 tol=0.995
2024-07-28 08:21:01,582 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=74.8 pTM=0.516 ipTM=0.406 tol=1.34
2024-07-28 08:21:15,453 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74.1 pTM=0.501 ipTM=0.349 tol=2.06
2024-07-28 08:21:29,335 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.6 pTM=0.522 ipTM=0.414 tol=1.19
2024-07-28 08:21:43,219 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=74.2 pTM=0.497 ipTM=0.342 tol=1.14
2024-07-28 08:21:57,125 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.6 pTM=0.489 ipTM=0.303 tol=3.39
2024-07-28 08:22:11,028 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=74.1 pTM=0.501 ipTM=0.358 tol=1.72
2024-07-28 08:22:24,932 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=73.8 pTM=0.498 ipTM=0.336 tol=1.43
2024-07-28 08:22:38,844 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74 pTM=0.499 ipTM=0.34 tol=1.68
2024-07-28 08:22:52,751 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.1 pTM=0.502 ipTM=0.351 tol=1.73
2024-07-28 08:23:06,677 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74.1 pTM=0.499 ipTM=0.339 tol=1.14
2024-07-28 08:23:20,600 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73.9 pTM=0.5 ipTM=0.337 tol=1.12
2024-07-28 08:23:34,527 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.7 pTM=0.488 ipTM=0.296 tol=2.43
2024-07-28 08:23:48,448 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=73.6 pTM=0.494 ipTM=0.307 tol=1.42
2024-07-28 08:24:02,382 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.8 pTM=0.495 ipTM=0.316 tol=1.2
2024-07-28 08:24:16,315 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=73.4 pTM=0.495 ipTM=0.311 tol=2.7
2024-07-28 08:24:30,244 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=73.3 pTM=0.484 ipTM=0.283 tol=1.46
2024-07-28 08:24:44,190 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=73.5 pTM=0.497 ipTM=0.316 tol=1.3
2024-07-28 08:24:58,115 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=73.4 pTM=0.494 ipTM=0.325 tol=0.984
2024-07-28 08:25:12,046 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=73.4 pTM=0.492 ipTM=0.302 tol=1.59
2024-07-28 08:25:25,963 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=73.6 pTM=0.496 ipTM=0.327 tol=2.57
2024-07-28 08:25:39,891 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=73.5 pTM=0.497 ipTM=0.324 tol=2.39
2024-07-28 08:25:53,842 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=73.6 pTM=0.484 ipTM=0.278 tol=1.72
2024-07-28 08:26:07,773 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.9 pTM=0.504 ipTM=0.339 tol=2.3
2024-07-28 08:26:21,700 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.2 pTM=0.527 ipTM=0.421 tol=2.29
2024-07-28 08:26:21,700 alphafold2_multimer_v3_model_1_seed_000 took 574.3s (30 recycles)
2024-07-28 08:26:36,070 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.1 pTM=0.465 ipTM=0.199
2024-07-28 08:26:50,012 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=72.9 pTM=0.491 ipTM=0.335 tol=13.6
2024-07-28 08:27:03,987 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=73.4 pTM=0.481 ipTM=0.245 tol=8.34
2024-07-28 08:27:17,958 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73.3 pTM=0.473 ipTM=0.207 tol=4.93
2024-07-28 08:27:31,926 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.8 pTM=0.49 ipTM=0.284 tol=2.16
2024-07-28 08:27:45,900 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=74.2 pTM=0.488 ipTM=0.263 tol=3.96
2024-07-28 08:27:59,853 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=74 pTM=0.49 ipTM=0.26 tol=2.02
2024-07-28 08:28:13,830 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.9 pTM=0.475 ipTM=0.211 tol=1.67
2024-07-28 08:28:27,805 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.7 pTM=0.471 ipTM=0.195 tol=1.89
2024-07-28 08:28:41,776 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=74.2 pTM=0.488 ipTM=0.279 tol=2.3
2024-07-28 08:28:55,737 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=75.2 pTM=0.528 ipTM=0.396 tol=3.25
2024-07-28 08:29:09,714 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=74.5 pTM=0.489 ipTM=0.264 tol=2.01
2024-07-28 08:29:23,692 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=74.3 pTM=0.483 ipTM=0.239 tol=1.28
2024-07-28 08:29:37,662 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.9 pTM=0.483 ipTM=0.251 tol=1.5
2024-07-28 08:29:51,638 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=74.5 pTM=0.49 ipTM=0.279 tol=1.83
2024-07-28 08:30:05,615 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=74.1 pTM=0.484 ipTM=0.24 tol=2.48
2024-07-28 08:30:19,576 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=74.8 pTM=0.505 ipTM=0.325 tol=2.28
2024-07-28 08:30:33,547 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=74.4 pTM=0.488 ipTM=0.266 tol=1.19
2024-07-28 08:30:47,510 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=74.5 pTM=0.496 ipTM=0.287 tol=1.63
2024-07-28 08:31:01,473 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=74.6 pTM=0.489 ipTM=0.27 tol=1.5
2024-07-28 08:31:15,440 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=74.6 pTM=0.493 ipTM=0.277 tol=1.27
2024-07-28 08:31:29,404 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=74.4 pTM=0.49 ipTM=0.266 tol=1.7
2024-07-28 08:31:43,374 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=74.2 pTM=0.489 ipTM=0.263 tol=1.27
2024-07-28 08:31:57,345 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=74.2 pTM=0.488 ipTM=0.258 tol=1.97
2024-07-28 08:32:11,301 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=74.4 pTM=0.495 ipTM=0.288 tol=2.12
2024-07-28 08:32:25,263 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=74.3 pTM=0.484 ipTM=0.249 tol=1.19
2024-07-28 08:32:39,223 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=74.1 pTM=0.488 ipTM=0.254 tol=1.53
2024-07-28 08:32:53,180 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=74.1 pTM=0.483 ipTM=0.236 tol=1.55
2024-07-28 08:33:07,142 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=74.2 pTM=0.494 ipTM=0.266 tol=1.9
2024-07-28 08:33:21,103 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=74.6 pTM=0.489 ipTM=0.268 tol=2.49
2024-07-28 08:33:35,068 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=74.1 pTM=0.488 ipTM=0.244 tol=2.89
2024-07-28 08:33:35,068 alphafold2_multimer_v3_model_2_seed_000 took 432.9s (30 recycles)
2024-07-28 08:33:49,398 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.8 pTM=0.454 ipTM=0.157
2024-07-28 08:34:03,321 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=72.9 pTM=0.501 ipTM=0.326 tol=13.5
2024-07-28 08:34:17,249 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.2 pTM=0.487 ipTM=0.272 tol=4.9
2024-07-28 08:34:31,165 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73 pTM=0.501 ipTM=0.313 tol=3.19
2024-07-28 08:34:45,105 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.1 pTM=0.485 ipTM=0.26 tol=2.24
2024-07-28 08:34:59,029 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=72.8 pTM=0.491 ipTM=0.27 tol=2
2024-07-28 08:35:12,942 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=73.2 pTM=0.504 ipTM=0.337 tol=1.75
2024-07-28 08:35:26,877 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=73.2 pTM=0.49 ipTM=0.274 tol=1.59
2024-07-28 08:35:40,823 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=73.1 pTM=0.482 ipTM=0.24 tol=1.81
2024-07-28 08:35:54,756 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=73.2 pTM=0.496 ipTM=0.298 tol=1.91
2024-07-28 08:36:08,692 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=73.1 pTM=0.482 ipTM=0.248 tol=1.55
2024-07-28 08:36:22,627 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=72.9 pTM=0.48 ipTM=0.233 tol=2.21
2024-07-28 08:36:36,544 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=73.4 pTM=0.493 ipTM=0.3 tol=1.88
2024-07-28 08:36:50,484 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=73 pTM=0.484 ipTM=0.249 tol=1.21
2024-07-28 08:37:04,403 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=73.2 pTM=0.495 ipTM=0.29 tol=1.54
2024-07-28 08:37:18,314 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=73.6 pTM=0.497 ipTM=0.312 tol=3.22
2024-07-28 08:37:32,237 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=74.2 pTM=0.54 ipTM=0.461 tol=1.71
2024-07-28 08:37:46,159 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=76.2 pTM=0.627 ipTM=0.723 tol=3.49
2024-07-28 08:38:00,066 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.5 pTM=0.638 ipTM=0.752 tol=1.19
2024-07-28 08:38:13,982 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.7 pTM=0.637 ipTM=0.75 tol=0.986
2024-07-28 08:38:27,909 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.9 pTM=0.639 ipTM=0.748 tol=0.857
2024-07-28 08:38:41,831 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76.8 pTM=0.643 ipTM=0.761 tol=1
2024-07-28 08:38:55,757 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.8 pTM=0.644 ipTM=0.761 tol=0.687
2024-07-28 08:39:09,682 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.8 pTM=0.642 ipTM=0.756 tol=0.641
2024-07-28 08:39:23,601 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76.9 pTM=0.644 ipTM=0.764 tol=0.601
2024-07-28 08:39:37,530 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.9 pTM=0.644 ipTM=0.762 tol=0.614
2024-07-28 08:39:51,453 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.8 pTM=0.641 ipTM=0.756 tol=1.23
2024-07-28 08:40:05,385 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77 pTM=0.649 ipTM=0.772 tol=0.49
2024-07-28 08:40:05,386 alphafold2_multimer_v3_model_3_seed_000 took 389.9s (27 recycles)
2024-07-28 08:40:19,765 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.3 pTM=0.428 ipTM=0.154
2024-07-28 08:40:33,731 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.2 pTM=0.441 ipTM=0.157 tol=17.3
2024-07-28 08:40:47,689 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68.5 pTM=0.438 ipTM=0.145 tol=9.21
2024-07-28 08:41:01,624 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.8 pTM=0.448 ipTM=0.148 tol=11.6
2024-07-28 08:41:15,590 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69.3 pTM=0.444 ipTM=0.143 tol=7.55
2024-07-28 08:41:29,538 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.6 pTM=0.447 ipTM=0.149 tol=5.75
2024-07-28 08:41:43,503 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.2 pTM=0.447 ipTM=0.14 tol=5.06
2024-07-28 08:41:57,447 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.6 pTM=0.451 ipTM=0.164 tol=5.1
2024-07-28 08:42:11,401 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=69.6 pTM=0.448 ipTM=0.143 tol=2.57
2024-07-28 08:42:25,348 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.6 pTM=0.445 ipTM=0.142 tol=2.76
2024-07-28 08:42:39,281 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.6 pTM=0.449 ipTM=0.17 tol=1.92
2024-07-28 08:42:53,201 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=69.6 pTM=0.445 ipTM=0.143 tol=1.38
2024-07-28 08:43:07,123 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.1 pTM=0.448 ipTM=0.154 tol=2.13
2024-07-28 08:43:21,052 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=69.5 pTM=0.445 ipTM=0.145 tol=2.88
2024-07-28 08:43:34,993 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=69.4 pTM=0.446 ipTM=0.139 tol=5.35
2024-07-28 08:43:48,924 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=69.4 pTM=0.447 ipTM=0.151 tol=5.69
2024-07-28 08:44:02,884 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=69.7 pTM=0.445 ipTM=0.137 tol=8
2024-07-28 08:44:16,856 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=69.7 pTM=0.442 ipTM=0.132 tol=4.87
2024-07-28 08:44:30,825 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69.9 pTM=0.442 ipTM=0.131 tol=6.77
2024-07-28 08:44:44,771 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=69.8 pTM=0.45 ipTM=0.194 tol=10.2
2024-07-28 08:44:58,707 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70 pTM=0.448 ipTM=0.16 tol=5.03
2024-07-28 08:45:12,625 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.4 pTM=0.465 ipTM=0.294 tol=6.83
2024-07-28 08:45:26,569 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=71.2 pTM=0.444 ipTM=0.145 tol=5.51
2024-07-28 08:45:40,510 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.4 pTM=0.452 ipTM=0.151 tol=4.32
2024-07-28 08:45:54,431 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.5 pTM=0.451 ipTM=0.192 tol=4.36
2024-07-28 08:46:08,334 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.4 pTM=0.488 ipTM=0.444 tol=4.32
2024-07-28 08:46:22,224 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=71.4 pTM=0.478 ipTM=0.36 tol=2.45
2024-07-28 08:46:36,116 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.1 pTM=0.494 ipTM=0.494 tol=2.76
2024-07-28 08:46:50,010 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=73.1 pTM=0.514 ipTM=0.515 tol=2.94
2024-07-28 08:47:03,902 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.7 pTM=0.502 ipTM=0.481 tol=2.5
2024-07-28 08:47:17,785 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.6 pTM=0.507 ipTM=0.504 tol=2.07
2024-07-28 08:47:17,786 alphafold2_multimer_v3_model_4_seed_000 took 432.0s (30 recycles)
2024-07-28 08:47:32,124 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.9 pTM=0.452 ipTM=0.156
2024-07-28 08:47:46,041 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=72.3 pTM=0.557 ipTM=0.524 tol=13.5
2024-07-28 08:47:59,991 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=71.7 pTM=0.499 ipTM=0.308 tol=3.76
2024-07-28 08:48:13,928 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=72 pTM=0.522 ipTM=0.365 tol=4.14
2024-07-28 08:48:27,871 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=73.5 pTM=0.574 ipTM=0.555 tol=4.06
2024-07-28 08:48:41,808 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=72.7 pTM=0.529 ipTM=0.436 tol=2.46
2024-07-28 08:48:55,752 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=72.6 pTM=0.53 ipTM=0.418 tol=3.03
2024-07-28 08:49:09,714 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=72 pTM=0.518 ipTM=0.365 tol=2.42
2024-07-28 08:49:23,682 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=72.2 pTM=0.508 ipTM=0.338 tol=2
2024-07-28 08:49:37,643 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=72.2 pTM=0.521 ipTM=0.385 tol=1.01
2024-07-28 08:49:51,617 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=72.1 pTM=0.5 ipTM=0.309 tol=1.33
2024-07-28 08:50:05,593 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.8 pTM=0.498 ipTM=0.284 tol=3.57
2024-07-28 08:50:19,563 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.8 pTM=0.497 ipTM=0.296 tol=1.97
2024-07-28 08:50:33,524 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=72.1 pTM=0.517 ipTM=0.365 tol=1.83
2024-07-28 08:50:47,496 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=72 pTM=0.511 ipTM=0.36 tol=2.29
2024-07-28 08:51:01,454 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=72.2 pTM=0.517 ipTM=0.378 tol=1.89
2024-07-28 08:51:15,417 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.8 pTM=0.509 ipTM=0.355 tol=1.86
2024-07-28 08:51:29,387 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=72.6 pTM=0.55 ipTM=0.488 tol=1.47
2024-07-28 08:51:43,357 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=72.4 pTM=0.524 ipTM=0.423 tol=2.64
2024-07-28 08:51:57,317 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=72.1 pTM=0.517 ipTM=0.385 tol=1.53
2024-07-28 08:52:11,280 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=72.1 pTM=0.508 ipTM=0.347 tol=1.81
2024-07-28 08:52:25,255 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.8 pTM=0.511 ipTM=0.35 tol=5.51
2024-07-28 08:52:39,229 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.8 pTM=0.511 ipTM=0.351 tol=2.38
2024-07-28 08:52:53,203 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71.8 pTM=0.509 ipTM=0.338 tol=2.37
2024-07-28 08:53:07,169 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.6 pTM=0.494 ipTM=0.288 tol=3.62
2024-07-28 08:53:21,138 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.9 pTM=0.501 ipTM=0.308 tol=2.62
2024-07-28 08:53:35,103 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.9 pTM=0.498 ipTM=0.313 tol=3.19
2024-07-28 08:53:49,067 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=72.1 pTM=0.519 ipTM=0.379 tol=2.23
2024-07-28 08:54:03,027 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=72.1 pTM=0.508 ipTM=0.35 tol=4.04
2024-07-28 08:54:16,994 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=72.2 pTM=0.513 ipTM=0.355 tol=3.94
2024-07-28 08:54:30,954 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.9 pTM=0.501 ipTM=0.314 tol=1.68
2024-07-28 08:54:30,955 alphafold2_multimer_v3_model_5_seed_000 took 432.7s (30 recycles)
2024-07-28 08:54:31,379 reranking models by 'multimer' metric
2024-07-28 08:54:34,387 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 08:55:29,151 Relaxation took 57.8s
2024-07-28 08:55:29,151 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77 pTM=0.649 ipTM=0.772
2024-07-28 08:56:23,746 Relaxation took 54.6s
2024-07-28 08:56:23,746 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.6 pTM=0.507 ipTM=0.504
2024-07-28 08:57:14,329 Relaxation took 50.6s
2024-07-28 08:57:14,329 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.2 pTM=0.527 ipTM=0.421
2024-07-28 08:58:31,542 Relaxation took 77.2s
2024-07-28 08:58:31,542 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.9 pTM=0.501 ipTM=0.314
2024-07-28 08:59:32,236 Relaxation took 60.7s
2024-07-28 08:59:32,236 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=74.1 pTM=0.488 ipTM=0.244
2024-07-28 08:59:33,713 Done