2024-07-28 08:15:11,967 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 08:15:12,299 Running on GPU
2024-07-28 08:15:15,111 Found 6 citations for tools or databases
2024-07-28 08:15:15,111 Query 1/1: VDR_FBXL16 (length 973)
2024-07-28 08:15:15,563 Sleeping for 10s. Reason: PENDING
2024-07-28 08:15:25,979 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:15:34,423 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:15:39,858 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:15:45,275 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:15:50,705 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:15:59,110 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:16:04,527 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:16:14,958 Sleeping for 10s. Reason: RUNNING
2024-07-28 08:16:25,373 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:16:30,780 Sleeping for 7s. Reason: RUNNING
2024-07-28 08:16:38,220 Sleeping for 6s. Reason: RUNNING
2024-07-28 08:16:44,635 Sleeping for 7s. Reason: RUNNING
2024-07-28 08:16:52,064 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:17:03,141 Sleeping for 6s. Reason: PENDING
2024-07-28 08:17:09,547 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:17:18,993 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:17:28,420 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:17:37,838 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:17:47,260 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:17:52,683 Sleeping for 5s. Reason: RUNNING
2024-07-28 08:17:58,113 Sleeping for 9s. Reason: RUNNING
2024-07-28 08:18:07,533 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:18:15,977 Sleeping for 8s. Reason: RUNNING
2024-07-28 08:18:27,167 Setting max_seq=508, max_extra_seq=2048
2024-07-28 08:22:03,292 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=68.6 pTM=0.462 ipTM=0.214
2024-07-28 08:22:24,840 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=68.8 pTM=0.461 ipTM=0.208 tol=9.1
2024-07-28 08:22:46,440 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.4 pTM=0.459 ipTM=0.21 tol=5.1
2024-07-28 08:23:08,150 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.8 pTM=0.458 ipTM=0.188 tol=4.71
2024-07-28 08:23:29,935 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.9 pTM=0.46 ipTM=0.171 tol=12.6
2024-07-28 08:23:51,765 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.1 pTM=0.456 ipTM=0.159 tol=10.4
2024-07-28 08:24:13,610 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.5 pTM=0.461 ipTM=0.166 tol=4.54
2024-07-28 08:24:35,458 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.1 pTM=0.459 ipTM=0.165 tol=4.96
2024-07-28 08:24:57,292 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.8 pTM=0.463 ipTM=0.172 tol=3.07
2024-07-28 08:25:19,133 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.8 pTM=0.461 ipTM=0.168 tol=3.75
2024-07-28 08:25:40,940 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.8 pTM=0.461 ipTM=0.171 tol=2.7
2024-07-28 08:26:02,755 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.9 pTM=0.462 ipTM=0.167 tol=2.2
2024-07-28 08:26:24,540 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.4 pTM=0.461 ipTM=0.228 tol=2.61
2024-07-28 08:26:46,355 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.6 pTM=0.462 ipTM=0.227 tol=2.08
2024-07-28 08:27:08,168 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.6 pTM=0.462 ipTM=0.205 tol=4.21
2024-07-28 08:27:30,014 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.8 pTM=0.464 ipTM=0.218 tol=3
2024-07-28 08:27:51,849 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.7 pTM=0.466 ipTM=0.218 tol=3.99
2024-07-28 08:28:13,653 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.5 pTM=0.48 ipTM=0.213 tol=3.66
2024-07-28 08:28:35,498 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.1 pTM=0.476 ipTM=0.206 tol=5.14
2024-07-28 08:28:57,309 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.4 pTM=0.48 ipTM=0.244 tol=3.8
2024-07-28 08:29:19,133 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.8 pTM=0.471 ipTM=0.251 tol=4.05
2024-07-28 08:29:40,951 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.7 pTM=0.482 ipTM=0.235 tol=3.76
2024-07-28 08:30:02,791 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.8 pTM=0.474 ipTM=0.209 tol=3.38
2024-07-28 08:30:24,626 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.2 pTM=0.472 ipTM=0.228 tol=3.21
2024-07-28 08:30:46,470 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.2 pTM=0.469 ipTM=0.212 tol=3.39
2024-07-28 08:31:08,299 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.9 pTM=0.47 ipTM=0.198 tol=2.97
2024-07-28 08:31:30,158 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.9 pTM=0.468 ipTM=0.243 tol=4.85
2024-07-28 08:31:51,984 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.4 pTM=0.472 ipTM=0.219 tol=3.87
2024-07-28 08:32:13,840 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.6 pTM=0.464 ipTM=0.231 tol=3.9
2024-07-28 08:32:35,657 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.5 pTM=0.469 ipTM=0.246 tol=2.48
2024-07-28 08:32:57,474 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.8 pTM=0.463 ipTM=0.213 tol=2.77
2024-07-28 08:32:57,475 alphafold2_multimer_v3_model_1_seed_000 took 865.5s (30 recycles)
2024-07-28 08:33:20,011 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68 pTM=0.475 ipTM=0.193
2024-07-28 08:33:41,968 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69.8 pTM=0.489 ipTM=0.211 tol=14.8
2024-07-28 08:34:03,948 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.1 pTM=0.475 ipTM=0.206 tol=18.7
2024-07-28 08:34:25,926 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.7 pTM=0.462 ipTM=0.158 tol=9.73
2024-07-28 08:34:47,859 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.8 pTM=0.49 ipTM=0.219 tol=20.2
2024-07-28 08:35:09,892 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.8 pTM=0.472 ipTM=0.179 tol=10.8
2024-07-28 08:35:31,888 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.4 pTM=0.496 ipTM=0.233 tol=11.2
2024-07-28 08:35:53,937 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.5 pTM=0.473 ipTM=0.183 tol=9.03
2024-07-28 08:36:15,955 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.9 pTM=0.48 ipTM=0.193 tol=4.12
2024-07-28 08:36:37,979 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.2 pTM=0.475 ipTM=0.187 tol=4.41
2024-07-28 08:37:00,013 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.8 pTM=0.481 ipTM=0.194 tol=3.18
2024-07-28 08:37:22,049 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69 pTM=0.479 ipTM=0.195 tol=3.11
2024-07-28 08:37:44,058 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.1 pTM=0.481 ipTM=0.196 tol=3.4
2024-07-28 08:38:06,110 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.3 pTM=0.478 ipTM=0.194 tol=5.57
2024-07-28 08:38:28,139 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.4 pTM=0.483 ipTM=0.199 tol=7.2
2024-07-28 08:38:50,183 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.2 pTM=0.473 ipTM=0.185 tol=2.86
2024-07-28 08:39:12,207 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.1 pTM=0.483 ipTM=0.197 tol=4.36
2024-07-28 08:39:34,251 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=69.1 pTM=0.477 ipTM=0.193 tol=4.41
2024-07-28 08:39:56,277 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.4 pTM=0.479 ipTM=0.192 tol=16.6
2024-07-28 08:40:18,308 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.4 pTM=0.476 ipTM=0.188 tol=11.9
2024-07-28 08:40:40,347 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.8 pTM=0.472 ipTM=0.181 tol=9.52
2024-07-28 08:41:02,379 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=69.4 pTM=0.472 ipTM=0.181 tol=8.12
2024-07-28 08:41:24,405 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.9 pTM=0.478 ipTM=0.198 tol=5.81
2024-07-28 08:41:46,447 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=69.9 pTM=0.471 ipTM=0.173 tol=7.09
2024-07-28 08:42:08,464 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=69.5 pTM=0.469 ipTM=0.175 tol=4.12
2024-07-28 08:42:30,479 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=69.8 pTM=0.47 ipTM=0.178 tol=3.48
2024-07-28 08:42:52,519 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.5 pTM=0.471 ipTM=0.177 tol=4.93
2024-07-28 08:43:14,525 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.4 pTM=0.474 ipTM=0.188 tol=3.49
2024-07-28 08:43:36,511 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.1 pTM=0.47 ipTM=0.172 tol=3.6
2024-07-28 08:43:58,494 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=69.2 pTM=0.479 ipTM=0.203 tol=5.1
2024-07-28 08:44:20,478 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69.3 pTM=0.472 ipTM=0.179 tol=4.48
2024-07-28 08:44:20,479 alphafold2_multimer_v3_model_2_seed_000 took 682.4s (30 recycles)
2024-07-28 08:44:43,053 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.2 pTM=0.459 ipTM=0.168
2024-07-28 08:45:05,048 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.9 pTM=0.47 ipTM=0.245 tol=15.7
2024-07-28 08:45:27,017 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.1 pTM=0.464 ipTM=0.17 tol=13.8
2024-07-28 08:45:48,968 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.4 pTM=0.476 ipTM=0.272 tol=10.1
2024-07-28 08:46:10,950 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.8 pTM=0.458 ipTM=0.155 tol=6.84
2024-07-28 08:46:32,927 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.1 pTM=0.462 ipTM=0.165 tol=8.37
2024-07-28 08:46:54,884 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.8 pTM=0.472 ipTM=0.192 tol=6.82
2024-07-28 08:47:16,887 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.2 pTM=0.464 ipTM=0.167 tol=8.3
2024-07-28 08:47:38,884 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=69.1 pTM=0.46 ipTM=0.166 tol=7.07
2024-07-28 08:48:00,870 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69 pTM=0.461 ipTM=0.159 tol=4.95
2024-07-28 08:48:22,872 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=69 pTM=0.459 ipTM=0.159 tol=5.9
2024-07-28 08:48:44,886 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69 pTM=0.458 ipTM=0.156 tol=6.66
2024-07-28 08:49:06,879 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.7 pTM=0.456 ipTM=0.161 tol=6.41
2024-07-28 08:49:28,882 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.9 pTM=0.46 ipTM=0.16 tol=4.21
2024-07-28 08:49:50,886 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69 pTM=0.456 ipTM=0.162 tol=5.32
2024-07-28 08:50:12,883 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.9 pTM=0.456 ipTM=0.153 tol=8.13
2024-07-28 08:50:34,905 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.7 pTM=0.456 ipTM=0.159 tol=5.84
2024-07-28 08:50:56,938 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.8 pTM=0.456 ipTM=0.156 tol=10.9
2024-07-28 08:51:18,938 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68.1 pTM=0.456 ipTM=0.158 tol=10.8
2024-07-28 08:51:40,949 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.8 pTM=0.457 ipTM=0.151 tol=9.08
2024-07-28 08:52:02,950 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.2 pTM=0.456 ipTM=0.157 tol=8.95
2024-07-28 08:52:24,965 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.9 pTM=0.454 ipTM=0.149 tol=10.7
2024-07-28 08:52:46,970 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.5 pTM=0.459 ipTM=0.156 tol=11.9
2024-07-28 08:53:08,971 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=69.2 pTM=0.458 ipTM=0.161 tol=6.45
2024-07-28 08:53:30,941 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=69.3 pTM=0.461 ipTM=0.167 tol=6.21
2024-07-28 08:53:52,957 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.8 pTM=0.455 ipTM=0.151 tol=12.3
2024-07-28 08:54:14,952 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=68.2 pTM=0.456 ipTM=0.16 tol=10
2024-07-28 08:54:36,975 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=68.8 pTM=0.456 ipTM=0.158 tol=5.79
2024-07-28 08:54:59,001 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68.8 pTM=0.458 ipTM=0.165 tol=6.66
2024-07-28 08:55:21,058 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=68.9 pTM=0.453 ipTM=0.153 tol=14.4
2024-07-28 08:55:43,086 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.6 pTM=0.466 ipTM=0.193 tol=8.81
2024-07-28 08:55:43,086 alphafold2_multimer_v3_model_3_seed_000 took 682.0s (30 recycles)
2024-07-28 08:56:05,711 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=68.6 pTM=0.457 ipTM=0.176
2024-07-28 08:56:27,729 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=69.2 pTM=0.462 ipTM=0.154 tol=15.9
2024-07-28 08:56:49,763 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.9 pTM=0.463 ipTM=0.229 tol=11.5
2024-07-28 08:57:11,826 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.6 pTM=0.452 ipTM=0.15 tol=11.3
2024-07-28 08:57:33,841 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68 pTM=0.478 ipTM=0.28 tol=9.09
2024-07-28 08:57:55,914 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=69 pTM=0.451 ipTM=0.146 tol=9.02
2024-07-28 08:58:17,966 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.1 pTM=0.45 ipTM=0.147 tol=5.79
2024-07-28 08:58:40,020 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.7 pTM=0.457 ipTM=0.162 tol=6.39
2024-07-28 08:59:02,028 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.8 pTM=0.468 ipTM=0.217 tol=13.2
2024-07-28 08:59:23,982 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=69.1 pTM=0.474 ipTM=0.177 tol=4.73
2024-07-28 08:59:45,938 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.2 pTM=0.472 ipTM=0.186 tol=4.84
2024-07-28 09:00:07,899 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.8 pTM=0.475 ipTM=0.186 tol=4.43
2024-07-28 09:00:29,887 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.8 pTM=0.461 ipTM=0.167 tol=5.16
2024-07-28 09:00:51,899 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.5 pTM=0.457 ipTM=0.15 tol=5.28
2024-07-28 09:01:13,907 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.2 pTM=0.458 ipTM=0.152 tol=6.31
2024-07-28 09:01:35,901 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68 pTM=0.466 ipTM=0.167 tol=5.98
2024-07-28 09:01:57,891 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.8 pTM=0.465 ipTM=0.165 tol=4.31
2024-07-28 09:02:19,880 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.6 pTM=0.467 ipTM=0.173 tol=9.05
2024-07-28 09:02:41,880 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=69 pTM=0.467 ipTM=0.17 tol=3.8
2024-07-28 09:03:03,844 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.5 pTM=0.477 ipTM=0.196 tol=6.31
2024-07-28 09:03:25,867 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.9 pTM=0.465 ipTM=0.168 tol=9.27
2024-07-28 09:03:47,876 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.7 pTM=0.467 ipTM=0.172 tol=2.85
2024-07-28 09:04:09,886 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.9 pTM=0.473 ipTM=0.184 tol=5.91
2024-07-28 09:04:31,897 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.9 pTM=0.476 ipTM=0.188 tol=4.09
2024-07-28 09:04:53,918 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=69.1 pTM=0.472 ipTM=0.18 tol=4.29
2024-07-28 09:05:15,944 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.8 pTM=0.47 ipTM=0.175 tol=3.14
2024-07-28 09:05:37,972 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=69.2 pTM=0.471 ipTM=0.18 tol=4.22
2024-07-28 09:05:59,989 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=69.2 pTM=0.466 ipTM=0.166 tol=3.7
2024-07-28 09:06:22,053 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.8 pTM=0.468 ipTM=0.171 tol=2.63
2024-07-28 09:06:44,112 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.9 pTM=0.468 ipTM=0.172 tol=2.91
2024-07-28 09:07:06,155 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.9 pTM=0.467 ipTM=0.172 tol=4.47
2024-07-28 09:07:06,156 alphafold2_multimer_v3_model_4_seed_000 took 682.5s (30 recycles)
2024-07-28 09:07:28,748 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=68.7 pTM=0.456 ipTM=0.167
2024-07-28 09:07:50,760 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=68.8 pTM=0.467 ipTM=0.185 tol=10.2
2024-07-28 09:08:12,756 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.2 pTM=0.471 ipTM=0.167 tol=7.4
2024-07-28 09:08:34,775 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.4 pTM=0.469 ipTM=0.165 tol=3.97
2024-07-28 09:08:56,812 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.7 pTM=0.472 ipTM=0.169 tol=3.03
2024-07-28 09:09:18,818 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.1 pTM=0.476 ipTM=0.178 tol=4.12
2024-07-28 09:09:40,826 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.1 pTM=0.48 ipTM=0.187 tol=5.39
2024-07-28 09:10:02,829 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.1 pTM=0.479 ipTM=0.187 tol=4.06
2024-07-28 09:10:24,898 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.6 pTM=0.483 ipTM=0.266 tol=7.68
2024-07-28 09:10:46,976 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.1 pTM=0.479 ipTM=0.238 tol=5.78
2024-07-28 09:11:09,058 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.5 pTM=0.475 ipTM=0.21 tol=6.75
2024-07-28 09:11:31,119 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.4 pTM=0.479 ipTM=0.215 tol=4.83
2024-07-28 09:11:53,163 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.2 pTM=0.48 ipTM=0.217 tol=3.81
2024-07-28 09:12:15,202 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70 pTM=0.479 ipTM=0.186 tol=3.17
2024-07-28 09:12:37,202 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.4 pTM=0.486 ipTM=0.2 tol=4.04
2024-07-28 09:12:59,218 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69.1 pTM=0.481 ipTM=0.188 tol=2.87
2024-07-28 09:13:21,236 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69.2 pTM=0.48 ipTM=0.181 tol=2.91
2024-07-28 09:13:43,249 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.1 pTM=0.481 ipTM=0.187 tol=1.77
2024-07-28 09:14:05,270 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69.2 pTM=0.479 ipTM=0.183 tol=2.21
2024-07-28 09:14:27,277 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69.1 pTM=0.487 ipTM=0.197 tol=2.04
2024-07-28 09:14:49,284 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69 pTM=0.484 ipTM=0.191 tol=2.33
2024-07-28 09:15:11,270 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.9 pTM=0.483 ipTM=0.19 tol=3.09
2024-07-28 09:15:33,279 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.9 pTM=0.488 ipTM=0.198 tol=3.16
2024-07-28 09:15:55,267 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69.1 pTM=0.485 ipTM=0.192 tol=3.14
2024-07-28 09:16:17,254 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.4 pTM=0.481 ipTM=0.207 tol=3.53
2024-07-28 09:16:39,247 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69.5 pTM=0.48 ipTM=0.212 tol=2.47
2024-07-28 09:17:01,236 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.4 pTM=0.481 ipTM=0.185 tol=3.47
2024-07-28 09:17:23,218 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.2 pTM=0.483 ipTM=0.201 tol=2.65
2024-07-28 09:17:45,211 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.5 pTM=0.481 ipTM=0.203 tol=2.84
2024-07-28 09:18:07,205 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=69.7 pTM=0.481 ipTM=0.19 tol=1.98
2024-07-28 09:18:29,183 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=69.4 pTM=0.484 ipTM=0.193 tol=1.63
2024-07-28 09:18:29,184 alphafold2_multimer_v3_model_5_seed_000 took 682.4s (30 recycles)
2024-07-28 09:18:29,771 reranking models by 'multimer' metric
2024-07-28 09:18:33,106 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 09:21:05,640 Relaxation took 155.9s
2024-07-28 09:21:05,641 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.8 pTM=0.463 ipTM=0.213
2024-07-28 09:24:12,066 Relaxation took 186.4s
2024-07-28 09:24:12,066 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=69.4 pTM=0.484 ipTM=0.193
2024-07-28 09:25:51,630 Relaxation took 99.6s
2024-07-28 09:25:51,630 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.6 pTM=0.466 ipTM=0.193
2024-07-28 09:27:23,163 Relaxation took 91.5s
2024-07-28 09:27:23,164 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69.3 pTM=0.472 ipTM=0.179
2024-07-28 09:29:25,206 Relaxation took 122.0s
2024-07-28 09:29:25,206 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.9 pTM=0.467 ipTM=0.172
2024-07-28 09:29:26,946 Done