2024-07-28 09:00:08,206 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 09:00:08,530 Running on GPU
2024-07-28 09:00:12,008 Found 6 citations for tools or databases
2024-07-28 09:00:12,008 Query 1/1: VDR_KCTD5 (length 728)
2024-07-28 09:00:12,463 Sleeping for 7s. Reason: PENDING
2024-07-28 09:00:19,903 Sleeping for 7s. Reason: RUNNING
2024-07-28 09:00:27,309 Sleeping for 9s. Reason: RUNNING
2024-07-28 09:00:36,730 Sleeping for 6s. Reason: RUNNING
2024-07-28 09:00:43,140 Sleeping for 6s. Reason: RUNNING
2024-07-28 09:00:49,578 Sleeping for 6s. Reason: RUNNING
2024-07-28 09:00:55,999 Sleeping for 8s. Reason: RUNNING
2024-07-28 09:01:04,427 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:01:09,849 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:01:21,985 Sleeping for 7s. Reason: PENDING
2024-07-28 09:01:29,416 Sleeping for 7s. Reason: RUNNING
2024-07-28 09:01:36,835 Sleeping for 6s. Reason: RUNNING
2024-07-28 09:01:43,258 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:01:53,697 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:02:04,157 Sleeping for 8s. Reason: RUNNING
2024-07-28 09:02:12,562 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:02:25,762 Setting max_seq=508, max_extra_seq=2048
2024-07-28 09:04:47,970 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.1 pTM=0.43 ipTM=0.194
2024-07-28 09:04:58,056 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=62.5 pTM=0.419 ipTM=0.134 tol=8.07
2024-07-28 09:05:08,165 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.8 pTM=0.429 ipTM=0.144 tol=8.85
2024-07-28 09:05:18,275 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.5 pTM=0.416 ipTM=0.115 tol=6.07
2024-07-28 09:05:28,405 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.4 pTM=0.42 ipTM=0.119 tol=4.21
2024-07-28 09:05:38,564 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.2 pTM=0.423 ipTM=0.117 tol=3.21
2024-07-28 09:05:48,711 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.3 pTM=0.423 ipTM=0.121 tol=3.23
2024-07-28 09:05:58,879 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.2 pTM=0.422 ipTM=0.12 tol=1.67
2024-07-28 09:06:09,055 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64 pTM=0.426 ipTM=0.123 tol=2.61
2024-07-28 09:06:19,217 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.1 pTM=0.426 ipTM=0.12 tol=3.22
2024-07-28 09:06:29,392 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.7 pTM=0.431 ipTM=0.125 tol=2.57
2024-07-28 09:06:39,569 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.5 pTM=0.428 ipTM=0.119 tol=2.02
2024-07-28 09:06:49,756 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.8 pTM=0.43 ipTM=0.119 tol=1.43
2024-07-28 09:06:59,953 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.8 pTM=0.428 ipTM=0.12 tol=3.05
2024-07-28 09:07:10,152 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.6 pTM=0.428 ipTM=0.118 tol=2.82
2024-07-28 09:07:20,357 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.4 pTM=0.428 ipTM=0.119 tol=5.67
2024-07-28 09:07:30,575 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.6 pTM=0.429 ipTM=0.12 tol=4.89
2024-07-28 09:07:40,777 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.2 pTM=0.425 ipTM=0.121 tol=4.36
2024-07-28 09:07:50,989 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.3 pTM=0.427 ipTM=0.124 tol=2.58
2024-07-28 09:08:01,201 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.2 pTM=0.431 ipTM=0.13 tol=3.04
2024-07-28 09:08:11,414 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.3 pTM=0.433 ipTM=0.134 tol=3.58
2024-07-28 09:08:21,630 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.4 pTM=0.433 ipTM=0.132 tol=3.9
2024-07-28 09:08:31,843 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.2 pTM=0.432 ipTM=0.134 tol=3.42
2024-07-28 09:08:42,054 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.2 pTM=0.434 ipTM=0.136 tol=2.13
2024-07-28 09:08:52,267 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.1 pTM=0.433 ipTM=0.137 tol=2.84
2024-07-28 09:09:02,482 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.2 pTM=0.436 ipTM=0.134 tol=3.58
2024-07-28 09:09:12,698 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.1 pTM=0.433 ipTM=0.138 tol=1.86
2024-07-28 09:09:22,911 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.9 pTM=0.429 ipTM=0.135 tol=2.64
2024-07-28 09:09:33,133 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.4 pTM=0.435 ipTM=0.136 tol=3.19
2024-07-28 09:09:43,364 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.7 pTM=0.44 ipTM=0.133 tol=3.66
2024-07-28 09:09:53,595 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.6 pTM=0.438 ipTM=0.131 tol=3.02
2024-07-28 09:09:53,596 alphafold2_multimer_v3_model_1_seed_000 took 442.8s (30 recycles)
2024-07-28 09:10:04,169 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.3 pTM=0.417 ipTM=0.133
2024-07-28 09:10:14,413 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.4 pTM=0.417 ipTM=0.123 tol=6.25
2024-07-28 09:10:24,657 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.8 pTM=0.422 ipTM=0.131 tol=4.82
2024-07-28 09:10:34,912 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.7 pTM=0.419 ipTM=0.115 tol=1.78
2024-07-28 09:10:45,169 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.6 pTM=0.425 ipTM=0.126 tol=2.87
2024-07-28 09:10:55,421 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64 pTM=0.419 ipTM=0.116 tol=2.11
2024-07-28 09:11:05,675 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.5 pTM=0.42 ipTM=0.12 tol=2.43
2024-07-28 09:11:15,931 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.5 pTM=0.419 ipTM=0.121 tol=3.36
2024-07-28 09:11:26,180 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.6 pTM=0.42 ipTM=0.125 tol=2.93
2024-07-28 09:11:36,431 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.4 pTM=0.419 ipTM=0.122 tol=3.25
2024-07-28 09:11:46,706 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.8 pTM=0.422 ipTM=0.114 tol=6.21
2024-07-28 09:11:56,983 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.6 pTM=0.426 ipTM=0.116 tol=7.49
2024-07-28 09:12:07,256 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.2 pTM=0.427 ipTM=0.126 tol=5.86
2024-07-28 09:12:17,533 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.6 pTM=0.427 ipTM=0.125 tol=3.76
2024-07-28 09:12:27,812 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.8 pTM=0.428 ipTM=0.122 tol=2.55
2024-07-28 09:12:38,091 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.8 pTM=0.428 ipTM=0.125 tol=2.32
2024-07-28 09:12:48,371 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.8 pTM=0.428 ipTM=0.119 tol=2.49
2024-07-28 09:12:58,641 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.6 pTM=0.426 ipTM=0.119 tol=2.87
2024-07-28 09:13:08,910 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.8 pTM=0.428 ipTM=0.119 tol=3.16
2024-07-28 09:13:19,174 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.6 pTM=0.432 ipTM=0.124 tol=3.24
2024-07-28 09:13:29,437 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.3 pTM=0.433 ipTM=0.137 tol=3.53
2024-07-28 09:13:39,699 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.7 pTM=0.442 ipTM=0.172 tol=3.48
2024-07-28 09:13:49,951 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.7 pTM=0.435 ipTM=0.163 tol=5.04
2024-07-28 09:14:00,230 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.9 pTM=0.426 ipTM=0.128 tol=3.52
2024-07-28 09:14:10,513 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.2 pTM=0.427 ipTM=0.124 tol=3.55
2024-07-28 09:14:20,801 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.6 pTM=0.429 ipTM=0.123 tol=6.16
2024-07-28 09:14:31,078 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.6 pTM=0.429 ipTM=0.125 tol=2.05
2024-07-28 09:14:41,354 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.6 pTM=0.429 ipTM=0.123 tol=2.33
2024-07-28 09:14:51,630 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.8 pTM=0.43 ipTM=0.122 tol=2.4
2024-07-28 09:15:01,897 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.8 pTM=0.433 ipTM=0.123 tol=2.11
2024-07-28 09:15:12,164 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.6 pTM=0.43 ipTM=0.125 tol=2.07
2024-07-28 09:15:12,165 alphafold2_multimer_v3_model_2_seed_000 took 318.2s (30 recycles)
2024-07-28 09:15:22,753 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.2 pTM=0.431 ipTM=0.152
2024-07-28 09:15:33,040 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63 pTM=0.438 ipTM=0.159 tol=17
2024-07-28 09:15:43,328 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.7 pTM=0.442 ipTM=0.168 tol=7.74
2024-07-28 09:15:53,616 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.2 pTM=0.436 ipTM=0.147 tol=7.52
2024-07-28 09:16:03,894 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.7 pTM=0.448 ipTM=0.183 tol=4.7
2024-07-28 09:16:14,169 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.5 pTM=0.445 ipTM=0.166 tol=4
2024-07-28 09:16:24,440 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.2 pTM=0.438 ipTM=0.153 tol=3.21
2024-07-28 09:16:34,707 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.5 pTM=0.447 ipTM=0.189 tol=3.26
2024-07-28 09:16:44,970 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.4 pTM=0.444 ipTM=0.159 tol=2.05
2024-07-28 09:16:55,237 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.7 pTM=0.447 ipTM=0.162 tol=2.19
2024-07-28 09:17:05,500 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.3 pTM=0.441 ipTM=0.161 tol=2.36
2024-07-28 09:17:15,757 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63 pTM=0.439 ipTM=0.153 tol=3.67
2024-07-28 09:17:26,022 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.1 pTM=0.443 ipTM=0.175 tol=2.75
2024-07-28 09:17:36,284 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.5 pTM=0.447 ipTM=0.183 tol=2.46
2024-07-28 09:17:46,545 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.2 pTM=0.441 ipTM=0.153 tol=2.16
2024-07-28 09:17:56,810 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.3 pTM=0.443 ipTM=0.167 tol=1.6
2024-07-28 09:18:07,066 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.3 pTM=0.441 ipTM=0.152 tol=1.57
2024-07-28 09:18:17,328 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.9 pTM=0.438 ipTM=0.149 tol=2.08
2024-07-28 09:18:27,585 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.2 pTM=0.445 ipTM=0.179 tol=2.73
2024-07-28 09:18:37,844 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.9 pTM=0.438 ipTM=0.147 tol=3
2024-07-28 09:18:48,103 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.2 pTM=0.45 ipTM=0.191 tol=2.96
2024-07-28 09:18:58,360 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.3 pTM=0.44 ipTM=0.163 tol=3.4
2024-07-28 09:19:08,618 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.9 pTM=0.438 ipTM=0.15 tol=2.98
2024-07-28 09:19:18,872 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.4 pTM=0.446 ipTM=0.192 tol=3.58
2024-07-28 09:19:29,135 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.4 pTM=0.442 ipTM=0.164 tol=3.53
2024-07-28 09:19:39,392 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.2 pTM=0.446 ipTM=0.177 tol=1.36
2024-07-28 09:19:49,653 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.5 pTM=0.445 ipTM=0.155 tol=2.95
2024-07-28 09:19:59,924 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.2 pTM=0.443 ipTM=0.152 tol=2.92
2024-07-28 09:20:10,193 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.8 pTM=0.453 ipTM=0.228 tol=5.02
2024-07-28 09:20:20,457 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.5 pTM=0.443 ipTM=0.156 tol=3.49
2024-07-28 09:20:30,718 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.1 pTM=0.444 ipTM=0.157 tol=2.32
2024-07-28 09:20:30,719 alphafold2_multimer_v3_model_3_seed_000 took 318.2s (30 recycles)
2024-07-28 09:20:41,271 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.2 pTM=0.417 ipTM=0.169
2024-07-28 09:20:51,489 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61 pTM=0.449 ipTM=0.28 tol=14
2024-07-28 09:21:01,732 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.2 pTM=0.419 ipTM=0.146 tol=10.5
2024-07-28 09:21:11,993 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.4 pTM=0.408 ipTM=0.129 tol=14.1
2024-07-28 09:21:22,231 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.3 pTM=0.409 ipTM=0.263 tol=18.4
2024-07-28 09:21:32,483 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.5 pTM=0.411 ipTM=0.177 tol=8.33
2024-07-28 09:21:42,735 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.1 pTM=0.406 ipTM=0.182 tol=5.38
2024-07-28 09:21:52,974 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.6 pTM=0.409 ipTM=0.253 tol=2.93
2024-07-28 09:22:03,211 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.2 pTM=0.408 ipTM=0.186 tol=2.52
2024-07-28 09:22:13,461 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64 pTM=0.41 ipTM=0.162 tol=6.25
2024-07-28 09:22:23,703 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.2 pTM=0.41 ipTM=0.182 tol=2.39
2024-07-28 09:22:33,946 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.1 pTM=0.408 ipTM=0.179 tol=2.47
2024-07-28 09:22:44,202 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.9 pTM=0.408 ipTM=0.152 tol=4.59
2024-07-28 09:22:54,454 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.3 pTM=0.408 ipTM=0.201 tol=5.26
2024-07-28 09:23:04,700 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.8 pTM=0.407 ipTM=0.171 tol=2.54
2024-07-28 09:23:14,949 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.9 pTM=0.407 ipTM=0.182 tol=3.24
2024-07-28 09:23:25,195 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=63.8 pTM=0.406 ipTM=0.182 tol=3.86
2024-07-28 09:23:35,434 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.4 pTM=0.403 ipTM=0.175 tol=2.37
2024-07-28 09:23:45,667 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.1 pTM=0.403 ipTM=0.167 tol=4.7
2024-07-28 09:23:55,901 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.7 pTM=0.406 ipTM=0.183 tol=5.25
2024-07-28 09:24:06,136 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.5 pTM=0.404 ipTM=0.193 tol=3.06
2024-07-28 09:24:16,366 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.2 pTM=0.402 ipTM=0.182 tol=3.1
2024-07-28 09:24:26,609 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.8 pTM=0.403 ipTM=0.156 tol=5.79
2024-07-28 09:24:36,851 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.5 pTM=0.406 ipTM=0.134 tol=7.29
2024-07-28 09:24:47,092 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.6 pTM=0.407 ipTM=0.124 tol=8.92
2024-07-28 09:24:57,315 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.3 pTM=0.405 ipTM=0.282 tol=13.8
2024-07-28 09:25:07,550 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.1 pTM=0.405 ipTM=0.193 tol=9.75
2024-07-28 09:25:17,782 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=63.4 pTM=0.402 ipTM=0.211 tol=3.52
2024-07-28 09:25:28,017 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=63.5 pTM=0.403 ipTM=0.197 tol=2.84
2024-07-28 09:25:38,247 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=63.5 pTM=0.403 ipTM=0.189 tol=2.7
2024-07-28 09:25:48,469 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=63.3 pTM=0.399 ipTM=0.202 tol=2.35
2024-07-28 09:25:48,470 alphafold2_multimer_v3_model_4_seed_000 took 317.4s (30 recycles)
2024-07-28 09:25:59,054 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.8 pTM=0.404 ipTM=0.109
2024-07-28 09:26:09,332 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.7 pTM=0.409 ipTM=0.102 tol=14
2024-07-28 09:26:19,600 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.5 pTM=0.411 ipTM=0.109 tol=9.95
2024-07-28 09:26:29,865 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.5 pTM=0.411 ipTM=0.11 tol=4.39
2024-07-28 09:26:40,121 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.3 pTM=0.41 ipTM=0.111 tol=4.55
2024-07-28 09:26:50,382 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.2 pTM=0.41 ipTM=0.109 tol=3.27
2024-07-28 09:27:00,653 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.8 pTM=0.409 ipTM=0.108 tol=4.18
2024-07-28 09:27:10,915 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.6 pTM=0.409 ipTM=0.112 tol=3.44
2024-07-28 09:27:21,183 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.4 pTM=0.414 ipTM=0.126 tol=7.17
2024-07-28 09:27:31,447 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.7 pTM=0.415 ipTM=0.124 tol=5.11
2024-07-28 09:27:41,720 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.8 pTM=0.412 ipTM=0.114 tol=4.99
2024-07-28 09:27:51,990 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.4 pTM=0.41 ipTM=0.115 tol=5.02
2024-07-28 09:28:02,260 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.6 pTM=0.413 ipTM=0.118 tol=3.1
2024-07-28 09:28:12,524 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.7 pTM=0.412 ipTM=0.114 tol=4.15
2024-07-28 09:28:22,796 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.8 pTM=0.415 ipTM=0.127 tol=4.54
2024-07-28 09:28:33,075 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.8 pTM=0.412 ipTM=0.118 tol=5.09
2024-07-28 09:28:43,356 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.2 pTM=0.417 ipTM=0.121 tol=3.41
2024-07-28 09:28:53,642 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.7 pTM=0.412 ipTM=0.116 tol=3.15
2024-07-28 09:29:03,924 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.5 pTM=0.414 ipTM=0.124 tol=5.7
2024-07-28 09:29:14,208 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63 pTM=0.413 ipTM=0.114 tol=6.86
2024-07-28 09:29:24,486 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63 pTM=0.415 ipTM=0.117 tol=3.43
2024-07-28 09:29:34,765 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63 pTM=0.413 ipTM=0.115 tol=5.68
2024-07-28 09:29:45,041 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.9 pTM=0.414 ipTM=0.12 tol=6.9
2024-07-28 09:29:55,323 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.6 pTM=0.412 ipTM=0.118 tol=3.74
2024-07-28 09:30:05,585 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.8 pTM=0.413 ipTM=0.12 tol=4.14
2024-07-28 09:30:15,855 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.7 pTM=0.413 ipTM=0.117 tol=4.27
2024-07-28 09:30:26,127 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.9 pTM=0.414 ipTM=0.118 tol=3.27
2024-07-28 09:30:36,402 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.6 pTM=0.412 ipTM=0.115 tol=5.77
2024-07-28 09:30:46,675 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.7 pTM=0.412 ipTM=0.115 tol=2.03
2024-07-28 09:30:56,957 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.7 pTM=0.411 ipTM=0.112 tol=5.43
2024-07-28 09:31:07,224 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.6 pTM=0.412 ipTM=0.118 tol=5.28
2024-07-28 09:31:07,224 alphafold2_multimer_v3_model_5_seed_000 took 318.4s (30 recycles)
2024-07-28 09:31:07,562 reranking models by 'multimer' metric
2024-07-28 09:31:10,392 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 09:32:00,758 Relaxation took 53.2s
2024-07-28 09:32:00,758 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=63.3 pTM=0.399 ipTM=0.202
2024-07-28 09:32:53,117 Relaxation took 52.4s
2024-07-28 09:32:53,117 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.1 pTM=0.444 ipTM=0.157
2024-07-28 09:33:36,403 Relaxation took 43.3s
2024-07-28 09:33:36,403 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.6 pTM=0.438 ipTM=0.131
2024-07-28 09:34:25,228 Relaxation took 48.8s
2024-07-28 09:34:25,229 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.6 pTM=0.43 ipTM=0.125
2024-07-28 09:35:11,140 Relaxation took 45.9s
2024-07-28 09:35:11,141 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.6 pTM=0.412 ipTM=0.118
2024-07-28 09:35:12,443 Done