2024-07-28 09:07:35,927 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 09:07:36,301 Running on GPU
2024-07-28 09:07:39,341 Found 6 citations for tools or databases
2024-07-28 09:07:39,341 Query 1/1: VDR_KLHL8 (length 1114)
2024-07-28 09:07:39,789 Sleeping for 8s. Reason: PENDING
2024-07-28 09:07:48,211 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:07:53,633 Sleeping for 8s. Reason: RUNNING
2024-07-28 09:08:02,061 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:08:07,498 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:08:17,947 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:08:23,422 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:08:33,859 Sleeping for 6s. Reason: RUNNING
2024-07-28 09:08:40,275 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:08:50,711 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:08:56,143 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:09:01,609 Sleeping for 8s. Reason: RUNNING
2024-07-28 09:09:10,034 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:09:20,469 Sleeping for 9s. Reason: RUNNING
2024-07-28 09:09:29,890 Sleeping for 10s. Reason: RUNNING
2024-07-28 09:09:40,300 Sleeping for 6s. Reason: RUNNING
2024-07-28 09:09:46,742 Sleeping for 7s. Reason: RUNNING
2024-07-28 09:09:54,195 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:09:59,643 Sleeping for 9s. Reason: RUNNING
2024-07-28 09:10:09,081 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:10:14,505 Sleeping for 9s. Reason: RUNNING
2024-07-28 09:10:23,945 Sleeping for 6s. Reason: RUNNING
2024-07-28 09:10:32,310 Sleeping for 7s. Reason: PENDING
2024-07-28 09:10:39,776 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:10:45,193 Sleeping for 7s. Reason: RUNNING
2024-07-28 09:10:52,650 Sleeping for 8s. Reason: RUNNING
2024-07-28 09:11:01,081 Sleeping for 8s. Reason: RUNNING
2024-07-28 09:11:09,539 Sleeping for 9s. Reason: RUNNING
2024-07-28 09:11:18,963 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:11:24,383 Sleeping for 7s. Reason: RUNNING
2024-07-28 09:11:31,825 Sleeping for 7s. Reason: RUNNING
2024-07-28 09:11:39,275 Sleeping for 8s. Reason: RUNNING
2024-07-28 09:11:47,703 Sleeping for 7s. Reason: RUNNING
2024-07-28 09:11:55,135 Sleeping for 5s. Reason: RUNNING
2024-07-28 09:12:00,561 Sleeping for 9s. Reason: RUNNING
2024-07-28 09:12:09,985 Sleeping for 8s. Reason: RUNNING
2024-07-28 09:12:23,757 Setting max_seq=508, max_extra_seq=2048
2024-07-28 09:16:18,488 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=72.5 pTM=0.508 ipTM=0.139
2024-07-28 09:16:50,654 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=73.4 pTM=0.531 ipTM=0.412 tol=22
2024-07-28 09:17:22,950 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=74.3 pTM=0.525 ipTM=0.414 tol=14.1
2024-07-28 09:17:55,332 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=74.1 pTM=0.525 ipTM=0.422 tol=8.95
2024-07-28 09:18:27,739 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=74.1 pTM=0.523 ipTM=0.427 tol=6.31
2024-07-28 09:19:00,159 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=74.2 pTM=0.522 ipTM=0.433 tol=4.22
2024-07-28 09:19:32,627 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=73.9 pTM=0.521 ipTM=0.425 tol=3.32
2024-07-28 09:20:05,097 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=73.9 pTM=0.521 ipTM=0.423 tol=2.11
2024-07-28 09:20:37,573 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=74 pTM=0.521 ipTM=0.424 tol=2.96
2024-07-28 09:21:10,069 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=74.2 pTM=0.521 ipTM=0.417 tol=5.37
2024-07-28 09:21:42,551 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=73.8 pTM=0.521 ipTM=0.409 tol=4.68
2024-07-28 09:22:15,068 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=74.1 pTM=0.522 ipTM=0.405 tol=4.18
2024-07-28 09:22:47,578 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=73.8 pTM=0.52 ipTM=0.406 tol=2.91
2024-07-28 09:23:20,105 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=74.7 pTM=0.527 ipTM=0.403 tol=3.04
2024-07-28 09:23:52,633 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=74 pTM=0.521 ipTM=0.404 tol=2.86
2024-07-28 09:24:25,154 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=74.5 pTM=0.523 ipTM=0.394 tol=3.38
2024-07-28 09:24:57,700 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=74 pTM=0.522 ipTM=0.397 tol=2.53
2024-07-28 09:25:30,248 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=74.5 pTM=0.525 ipTM=0.385 tol=1.81
2024-07-28 09:26:02,794 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=74.1 pTM=0.523 ipTM=0.398 tol=7.68
2024-07-28 09:26:35,377 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=74.6 pTM=0.522 ipTM=0.387 tol=4.4
2024-07-28 09:27:07,948 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=74.4 pTM=0.52 ipTM=0.392 tol=2.17
2024-07-28 09:27:40,523 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.6 pTM=0.521 ipTM=0.399 tol=2.71
2024-07-28 09:28:13,132 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74.4 pTM=0.521 ipTM=0.396 tol=1.71
2024-07-28 09:28:45,697 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.9 pTM=0.523 ipTM=0.4 tol=2.31
2024-07-28 09:29:18,296 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.9 pTM=0.521 ipTM=0.4 tol=1.79
2024-07-28 09:29:50,864 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.8 pTM=0.525 ipTM=0.407 tol=1.6
2024-07-28 09:30:23,431 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74.9 pTM=0.523 ipTM=0.402 tol=1.88
2024-07-28 09:30:55,978 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.1 pTM=0.525 ipTM=0.419 tol=1.26
2024-07-28 09:31:28,536 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.8 pTM=0.523 ipTM=0.413 tol=1.24
2024-07-28 09:32:01,085 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=74.9 pTM=0.526 ipTM=0.418 tol=1.37
2024-07-28 09:32:33,628 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.6 pTM=0.523 ipTM=0.406 tol=1.56
2024-07-28 09:32:33,629 alphafold2_multimer_v3_model_1_seed_000 took 1203.3s (30 recycles)
2024-07-28 09:33:07,225 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.1 pTM=0.528 ipTM=0.319
2024-07-28 09:33:39,841 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=75.6 pTM=0.542 ipTM=0.443 tol=17.9
2024-07-28 09:34:12,468 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=77.4 pTM=0.554 ipTM=0.46 tol=6.25
2024-07-28 09:34:45,123 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=77.2 pTM=0.546 ipTM=0.423 tol=7.04
2024-07-28 09:35:17,753 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=76.9 pTM=0.545 ipTM=0.408 tol=5.78
2024-07-28 09:35:50,377 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=77.1 pTM=0.544 ipTM=0.411 tol=4.53
2024-07-28 09:36:23,008 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=77.1 pTM=0.545 ipTM=0.401 tol=2.81
2024-07-28 09:36:55,610 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=76.8 pTM=0.544 ipTM=0.396 tol=2.14
2024-07-28 09:37:28,237 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=77.2 pTM=0.547 ipTM=0.401 tol=2.21
2024-07-28 09:38:00,845 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=77.2 pTM=0.548 ipTM=0.396 tol=1.02
2024-07-28 09:38:33,461 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=77.2 pTM=0.547 ipTM=0.393 tol=0.942
2024-07-28 09:39:06,057 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=77.1 pTM=0.545 ipTM=0.379 tol=0.947
2024-07-28 09:39:38,643 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=77 pTM=0.545 ipTM=0.382 tol=0.721
2024-07-28 09:40:11,235 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=77.2 pTM=0.549 ipTM=0.396 tol=1.74
2024-07-28 09:40:43,868 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=77.1 pTM=0.544 ipTM=0.394 tol=1.74
2024-07-28 09:41:16,472 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=77.1 pTM=0.547 ipTM=0.394 tol=1.41
2024-07-28 09:41:49,094 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=76.9 pTM=0.545 ipTM=0.394 tol=1.62
2024-07-28 09:42:21,660 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=77.1 pTM=0.546 ipTM=0.383 tol=0.687
2024-07-28 09:42:54,238 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=76.9 pTM=0.543 ipTM=0.388 tol=0.888
2024-07-28 09:43:26,816 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=77.1 pTM=0.544 ipTM=0.381 tol=0.749
2024-07-28 09:43:59,410 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=76.9 pTM=0.543 ipTM=0.385 tol=0.889
2024-07-28 09:44:31,980 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=76.9 pTM=0.543 ipTM=0.383 tol=1.62
2024-07-28 09:45:04,576 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=76.8 pTM=0.546 ipTM=0.382 tol=0.939
2024-07-28 09:45:37,222 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=76.9 pTM=0.545 ipTM=0.387 tol=1.17
2024-07-28 09:46:09,824 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=77.1 pTM=0.546 ipTM=0.376 tol=1.24
2024-07-28 09:46:42,407 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=77.1 pTM=0.547 ipTM=0.374 tol=0.821
2024-07-28 09:47:14,999 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=77.1 pTM=0.545 ipTM=0.377 tol=1.01
2024-07-28 09:47:47,591 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=77 pTM=0.546 ipTM=0.39 tol=0.826
2024-07-28 09:48:20,225 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=76.9 pTM=0.544 ipTM=0.384 tol=0.875
2024-07-28 09:48:52,845 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=76.9 pTM=0.545 ipTM=0.385 tol=1.15
2024-07-28 09:49:25,461 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=76.8 pTM=0.545 ipTM=0.386 tol=1.57
2024-07-28 09:49:25,462 alphafold2_multimer_v3_model_2_seed_000 took 1010.9s (30 recycles)
2024-07-28 09:49:59,108 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=75.1 pTM=0.53 ipTM=0.297
2024-07-28 09:50:31,737 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75.3 pTM=0.536 ipTM=0.306 tol=14.1
2024-07-28 09:51:04,408 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.6 pTM=0.548 ipTM=0.462 tol=8.1
2024-07-28 09:51:37,055 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=76.4 pTM=0.544 ipTM=0.421 tol=4.32
2024-07-28 09:52:09,694 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=75.9 pTM=0.541 ipTM=0.418 tol=3.59
2024-07-28 09:52:42,373 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=75.4 pTM=0.541 ipTM=0.426 tol=6.55
2024-07-28 09:53:15,041 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=75.3 pTM=0.542 ipTM=0.432 tol=4.66
2024-07-28 09:53:47,765 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=75.5 pTM=0.54 ipTM=0.45 tol=10.9
2024-07-28 09:54:20,428 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.4 pTM=0.543 ipTM=0.466 tol=8.24
2024-07-28 09:54:53,093 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.5 pTM=0.543 ipTM=0.447 tol=4.61
2024-07-28 09:55:25,746 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.6 pTM=0.539 ipTM=0.432 tol=11.7
2024-07-28 09:55:58,397 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.8 pTM=0.541 ipTM=0.429 tol=7.37
2024-07-28 09:56:30,957 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76.4 pTM=0.542 ipTM=0.442 tol=5.62
2024-07-28 09:57:03,617 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.3 pTM=0.538 ipTM=0.43 tol=11.6
2024-07-28 09:57:36,219 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=76.4 pTM=0.533 ipTM=0.412 tol=10.7
2024-07-28 09:58:08,850 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76.9 pTM=0.536 ipTM=0.398 tol=14
2024-07-28 09:58:41,465 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76.6 pTM=0.538 ipTM=0.44 tol=15.6
2024-07-28 09:59:14,113 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77 pTM=0.538 ipTM=0.425 tol=16.2
2024-07-28 09:59:46,760 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.6 pTM=0.535 ipTM=0.431 tol=15.4
2024-07-28 10:00:19,478 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.8 pTM=0.537 ipTM=0.395 tol=15.3
2024-07-28 10:00:52,123 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.5 pTM=0.535 ipTM=0.414 tol=16.5
2024-07-28 10:01:24,780 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76.8 pTM=0.534 ipTM=0.396 tol=15.3
2024-07-28 10:01:57,382 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.2 pTM=0.534 ipTM=0.415 tol=11.9
2024-07-28 10:02:30,003 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.7 pTM=0.535 ipTM=0.398 tol=17.5
2024-07-28 10:03:02,608 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76.4 pTM=0.534 ipTM=0.41 tol=19.7
2024-07-28 10:03:35,255 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.4 pTM=0.541 ipTM=0.416 tol=4.87
2024-07-28 10:04:07,915 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.3 pTM=0.536 ipTM=0.438 tol=7.07
2024-07-28 10:04:40,565 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.5 pTM=0.535 ipTM=0.41 tol=20.4
2024-07-28 10:05:13,194 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=76.2 pTM=0.535 ipTM=0.433 tol=19.4
2024-07-28 10:05:45,827 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.4 pTM=0.538 ipTM=0.42 tol=6.15
2024-07-28 10:06:18,491 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.1 pTM=0.532 ipTM=0.4 tol=7.82
2024-07-28 10:06:18,492 alphafold2_multimer_v3_model_3_seed_000 took 1012.1s (30 recycles)
2024-07-28 10:06:52,017 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=74.6 pTM=0.612 ipTM=0.478
2024-07-28 10:07:24,582 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.7 pTM=0.567 ipTM=0.287 tol=6.99
2024-07-28 10:07:57,161 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=74.5 pTM=0.55 ipTM=0.226 tol=4.17
2024-07-28 10:08:29,808 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.1 pTM=0.534 ipTM=0.172 tol=6.04
2024-07-28 10:09:02,461 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=74.6 pTM=0.525 ipTM=0.147 tol=10.3
2024-07-28 10:09:35,118 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=74.4 pTM=0.531 ipTM=0.143 tol=8.62
2024-07-28 10:10:07,750 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=74.7 pTM=0.528 ipTM=0.144 tol=4.57
2024-07-28 10:10:40,377 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=74.4 pTM=0.533 ipTM=0.151 tol=9.66
2024-07-28 10:11:13,042 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=75 pTM=0.534 ipTM=0.15 tol=6.98
2024-07-28 10:11:45,663 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=75.1 pTM=0.536 ipTM=0.166 tol=7.5
2024-07-28 10:12:18,268 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=74.8 pTM=0.53 ipTM=0.163 tol=8.43
2024-07-28 10:12:50,852 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=74.6 pTM=0.534 ipTM=0.151 tol=7.62
2024-07-28 10:13:23,413 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=74.6 pTM=0.525 ipTM=0.154 tol=9.34
2024-07-28 10:13:55,997 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=74.7 pTM=0.533 ipTM=0.149 tol=8.27
2024-07-28 10:14:28,601 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=74.6 pTM=0.526 ipTM=0.141 tol=12.3
2024-07-28 10:15:01,230 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=74.9 pTM=0.532 ipTM=0.147 tol=12.9
2024-07-28 10:15:33,818 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=74.3 pTM=0.526 ipTM=0.146 tol=11.9
2024-07-28 10:16:06,410 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=75.1 pTM=0.533 ipTM=0.15 tol=8.98
2024-07-28 10:16:39,018 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=75.8 pTM=0.531 ipTM=0.168 tol=7.69
2024-07-28 10:17:11,592 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=75.3 pTM=0.535 ipTM=0.166 tol=4.97
2024-07-28 10:17:44,165 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=75.6 pTM=0.533 ipTM=0.165 tol=4.7
2024-07-28 10:18:16,743 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=75.2 pTM=0.533 ipTM=0.153 tol=6.33
2024-07-28 10:18:49,335 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=75.7 pTM=0.533 ipTM=0.161 tol=6.03
2024-07-28 10:19:21,984 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=75.5 pTM=0.538 ipTM=0.161 tol=4.86
2024-07-28 10:19:54,654 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=75.7 pTM=0.533 ipTM=0.151 tol=6.07
2024-07-28 10:20:27,364 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=75.3 pTM=0.536 ipTM=0.151 tol=7.62
2024-07-28 10:21:00,029 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=75.4 pTM=0.532 ipTM=0.149 tol=7.09
2024-07-28 10:21:32,732 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=75.2 pTM=0.533 ipTM=0.15 tol=5.89
2024-07-28 10:22:05,405 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=75.3 pTM=0.534 ipTM=0.15 tol=7.37
2024-07-28 10:22:38,071 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=74.8 pTM=0.535 ipTM=0.156 tol=4.66
2024-07-28 10:23:10,734 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=75.4 pTM=0.531 ipTM=0.156 tol=7.26
2024-07-28 10:23:10,735 alphafold2_multimer_v3_model_4_seed_000 took 1011.3s (30 recycles)
2024-07-28 10:23:44,366 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.3 pTM=0.521 ipTM=0.159
2024-07-28 10:24:17,034 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.1 pTM=0.533 ipTM=0.189 tol=10.9
2024-07-28 10:24:49,712 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=74.8 pTM=0.54 ipTM=0.235 tol=6.15
2024-07-28 10:25:22,381 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=75.9 pTM=0.553 ipTM=0.396 tol=6.3
2024-07-28 10:25:55,039 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.8 pTM=0.553 ipTM=0.389 tol=4.52
2024-07-28 10:26:27,715 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=75.8 pTM=0.554 ipTM=0.399 tol=2.46
2024-07-28 10:27:00,381 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.6 pTM=0.549 ipTM=0.386 tol=3.68
2024-07-28 10:27:33,047 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.4 pTM=0.549 ipTM=0.384 tol=2.53
2024-07-28 10:28:05,712 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.6 pTM=0.55 ipTM=0.391 tol=3.55
2024-07-28 10:28:38,382 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=75.6 pTM=0.552 ipTM=0.395 tol=3.9
2024-07-28 10:29:11,063 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.6 pTM=0.55 ipTM=0.387 tol=1.95
2024-07-28 10:29:43,710 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=75.1 pTM=0.546 ipTM=0.365 tol=2.5
2024-07-28 10:30:16,359 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.1 pTM=0.545 ipTM=0.373 tol=1.25
2024-07-28 10:30:49,029 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=75.1 pTM=0.546 ipTM=0.376 tol=1.95
2024-07-28 10:31:21,681 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=75.1 pTM=0.543 ipTM=0.369 tol=2.12
2024-07-28 10:31:54,324 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=75.1 pTM=0.547 ipTM=0.367 tol=2.32
2024-07-28 10:32:26,971 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75.2 pTM=0.548 ipTM=0.372 tol=2.37
2024-07-28 10:32:59,627 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.1 pTM=0.547 ipTM=0.369 tol=2.44
2024-07-28 10:33:32,282 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.2 pTM=0.547 ipTM=0.373 tol=2.51
2024-07-28 10:34:04,961 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.3 pTM=0.548 ipTM=0.364 tol=1.59
2024-07-28 10:34:37,634 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.2 pTM=0.547 ipTM=0.369 tol=2.11
2024-07-28 10:35:10,308 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=75.1 pTM=0.548 ipTM=0.369 tol=2.12
2024-07-28 10:35:42,941 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=75 pTM=0.546 ipTM=0.365 tol=2.15
2024-07-28 10:36:15,563 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.2 pTM=0.548 ipTM=0.376 tol=2.86
2024-07-28 10:36:48,178 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.4 pTM=0.547 ipTM=0.37 tol=2.89
2024-07-28 10:37:20,793 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75.2 pTM=0.549 ipTM=0.378 tol=1.66
2024-07-28 10:37:53,389 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.2 pTM=0.546 ipTM=0.365 tol=1.77
2024-07-28 10:38:25,977 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.2 pTM=0.55 ipTM=0.384 tol=1.5
2024-07-28 10:38:58,566 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=75.2 pTM=0.545 ipTM=0.379 tol=1.09
2024-07-28 10:39:31,161 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75.2 pTM=0.547 ipTM=0.379 tol=2.04
2024-07-28 10:40:03,745 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=75 pTM=0.543 ipTM=0.36 tol=1.62
2024-07-28 10:40:03,746 alphafold2_multimer_v3_model_5_seed_000 took 1012.1s (30 recycles)
2024-07-28 10:40:04,700 reranking models by 'multimer' metric
2024-07-28 10:40:05,930 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 10:42:39,343 Relaxation took 154.6s
2024-07-28 10:42:39,343 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.6 pTM=0.523 ipTM=0.406
2024-07-28 10:45:23,850 Relaxation took 164.5s
2024-07-28 10:45:23,850 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.1 pTM=0.532 ipTM=0.4
2024-07-28 10:48:15,624 Relaxation took 171.8s
2024-07-28 10:48:15,624 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=76.8 pTM=0.545 ipTM=0.386
2024-07-28 10:50:33,042 Relaxation took 137.4s
2024-07-28 10:50:33,042 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=75 pTM=0.543 ipTM=0.36
2024-07-28 10:53:29,988 Relaxation took 176.9s
2024-07-28 10:53:29,988 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=75.4 pTM=0.531 ipTM=0.156
2024-07-28 10:53:32,957 Done