2024-07-28 09:35:44,415 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 09:35:44,745 Running on GPU 2024-07-28 09:35:48,121 Found 6 citations for tools or databases 2024-07-28 09:35:48,122 Query 1/1: ZFAND5_ELOB (length 331) 2024-07-28 09:35:48,558 Sleeping for 8s. Reason: PENDING 2024-07-28 09:35:56,984 Sleeping for 6s. Reason: RUNNING 2024-07-28 09:36:03,414 Sleeping for 5s. Reason: RUNNING 2024-07-28 09:36:08,825 Sleeping for 10s. Reason: RUNNING 2024-07-28 09:36:19,241 Sleeping for 8s. Reason: RUNNING 2024-07-28 09:36:29,291 Sleeping for 10s. Reason: PENDING 2024-07-28 09:36:39,710 Sleeping for 5s. Reason: RUNNING 2024-07-28 09:36:46,691 Setting max_seq=508, max_extra_seq=2048 2024-07-28 09:39:56,121 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.9 pTM=0.305 ipTM=0.075 2024-07-28 09:39:59,164 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.7 pTM=0.311 ipTM=0.0944 tol=13.7 2024-07-28 09:40:02,204 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.8 pTM=0.316 ipTM=0.11 tol=6.31 2024-07-28 09:40:05,236 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60 pTM=0.322 ipTM=0.145 tol=4.18 2024-07-28 09:40:08,269 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.1 pTM=0.333 ipTM=0.216 tol=4.39 2024-07-28 09:40:11,301 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60 pTM=0.336 ipTM=0.252 tol=3.43 2024-07-28 09:40:14,331 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.2 pTM=0.346 ipTM=0.287 tol=2.92 2024-07-28 09:40:17,357 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.9 pTM=0.341 ipTM=0.256 tol=1.56 2024-07-28 09:40:20,389 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.8 pTM=0.344 ipTM=0.276 tol=4.03 2024-07-28 09:40:23,416 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.5 pTM=0.34 ipTM=0.248 tol=3.73 2024-07-28 09:40:26,448 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59.7 pTM=0.34 ipTM=0.249 tol=1.49 2024-07-28 09:40:29,474 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.7 pTM=0.336 ipTM=0.232 tol=0.996 2024-07-28 09:40:32,506 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.2 pTM=0.342 ipTM=0.254 tol=2.91 2024-07-28 09:40:35,532 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.8 pTM=0.34 ipTM=0.269 tol=3.66 2024-07-28 09:40:38,563 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.1 pTM=0.342 ipTM=0.265 tol=2.66 2024-07-28 09:40:41,595 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60 pTM=0.338 ipTM=0.25 tol=2.98 2024-07-28 09:40:44,627 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60 pTM=0.342 ipTM=0.26 tol=3.54 2024-07-28 09:40:47,658 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.5 pTM=0.343 ipTM=0.275 tol=2.17 2024-07-28 09:40:50,688 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.4 pTM=0.347 ipTM=0.285 tol=1.39 2024-07-28 09:40:53,714 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.1 pTM=0.341 ipTM=0.255 tol=2.17 2024-07-28 09:40:56,746 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60 pTM=0.344 ipTM=0.269 tol=2.62 2024-07-28 09:40:59,776 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.2 pTM=0.341 ipTM=0.24 tol=3.49 2024-07-28 09:41:02,806 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.4 pTM=0.339 ipTM=0.258 tol=2.07 2024-07-28 09:41:05,835 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=59.9 pTM=0.34 ipTM=0.257 tol=1.95 2024-07-28 09:41:08,866 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.7 pTM=0.34 ipTM=0.245 tol=1.26 2024-07-28 09:41:11,895 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.6 pTM=0.341 ipTM=0.254 tol=2.98 2024-07-28 09:41:14,926 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.9 pTM=0.344 ipTM=0.276 tol=1.68 2024-07-28 09:41:17,956 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.2 pTM=0.345 ipTM=0.278 tol=2.74 2024-07-28 09:41:20,988 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.5 pTM=0.346 ipTM=0.279 tol=2.72 2024-07-28 09:41:24,019 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.9 pTM=0.338 ipTM=0.238 tol=1.96 2024-07-28 09:41:27,049 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.6 pTM=0.336 ipTM=0.23 tol=1.75 2024-07-28 09:41:27,049 alphafold2_multimer_v3_model_1_seed_000 took 275.7s (30 recycles) 2024-07-28 09:41:30,169 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55 pTM=0.309 ipTM=0.0929 2024-07-28 09:41:33,197 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58 pTM=0.308 ipTM=0.0849 tol=9.16 2024-07-28 09:41:36,218 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=59.2 pTM=0.318 ipTM=0.135 tol=5.61 2024-07-28 09:41:39,242 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.5 pTM=0.32 ipTM=0.162 tol=3.01 2024-07-28 09:41:42,267 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=59.7 pTM=0.331 ipTM=0.244 tol=2.91 2024-07-28 09:41:45,285 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=59.8 pTM=0.335 ipTM=0.27 tol=2.2 2024-07-28 09:41:48,308 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=59.5 pTM=0.336 ipTM=0.257 tol=2.41 2024-07-28 09:41:51,326 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.9 pTM=0.339 ipTM=0.274 tol=3.15 2024-07-28 09:41:54,349 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=59.7 pTM=0.333 ipTM=0.242 tol=2.46 2024-07-28 09:41:57,369 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=59.4 pTM=0.332 ipTM=0.244 tol=2.69 2024-07-28 09:42:00,390 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=59.8 pTM=0.336 ipTM=0.261 tol=1.85 2024-07-28 09:42:03,412 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=60.2 pTM=0.341 ipTM=0.285 tol=1.29 2024-07-28 09:42:06,437 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.8 pTM=0.333 ipTM=0.238 tol=1.55 2024-07-28 09:42:09,460 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.7 pTM=0.336 ipTM=0.276 tol=2.41 2024-07-28 09:42:12,483 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=59.9 pTM=0.335 ipTM=0.256 tol=1.66 2024-07-28 09:42:15,502 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.9 pTM=0.336 ipTM=0.263 tol=1.33 2024-07-28 09:42:18,526 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.2 pTM=0.335 ipTM=0.252 tol=1.35 2024-07-28 09:42:21,546 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.9 pTM=0.333 ipTM=0.234 tol=1.38 2024-07-28 09:42:24,568 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=60.5 pTM=0.342 ipTM=0.286 tol=1.13 2024-07-28 09:42:27,590 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=60.4 pTM=0.336 ipTM=0.251 tol=1.18 2024-07-28 09:42:30,612 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.1 pTM=0.34 ipTM=0.274 tol=1.49 2024-07-28 09:42:33,634 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=60.2 pTM=0.337 ipTM=0.253 tol=1.26 2024-07-28 09:42:36,657 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=59.8 pTM=0.335 ipTM=0.252 tol=1.1 2024-07-28 09:42:39,680 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=60.2 pTM=0.336 ipTM=0.255 tol=1.23 2024-07-28 09:42:42,702 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.7 pTM=0.334 ipTM=0.243 tol=1.28 2024-07-28 09:42:45,724 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.9 pTM=0.335 ipTM=0.247 tol=1.08 2024-07-28 09:42:48,748 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60 pTM=0.336 ipTM=0.259 tol=1.17 2024-07-28 09:42:51,767 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.8 pTM=0.333 ipTM=0.244 tol=1.54 2024-07-28 09:42:54,791 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.4 pTM=0.334 ipTM=0.245 tol=0.952 2024-07-28 09:42:57,815 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.8 pTM=0.33 ipTM=0.213 tol=1.21 2024-07-28 09:43:00,840 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.8 pTM=0.329 ipTM=0.208 tol=1.46 2024-07-28 09:43:00,840 alphafold2_multimer_v3_model_2_seed_000 took 93.7s (30 recycles) 2024-07-28 09:43:03,970 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.7 pTM=0.291 ipTM=0.0729 2024-07-28 09:43:06,999 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54 pTM=0.288 ipTM=0.111 tol=7.96 2024-07-28 09:43:10,028 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.1 pTM=0.297 ipTM=0.114 tol=6.32 2024-07-28 09:43:13,053 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.9 pTM=0.299 ipTM=0.131 tol=3.47 2024-07-28 09:43:16,080 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.3 pTM=0.311 ipTM=0.163 tol=8.63 2024-07-28 09:43:19,106 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=55.6 pTM=0.301 ipTM=0.133 tol=10.6 2024-07-28 09:43:22,137 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55 pTM=0.307 ipTM=0.174 tol=8.08 2024-07-28 09:43:25,164 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.2 pTM=0.302 ipTM=0.12 tol=7.33 2024-07-28 09:43:28,192 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=55.1 pTM=0.306 ipTM=0.152 tol=3.26 2024-07-28 09:43:31,216 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.1 pTM=0.309 ipTM=0.167 tol=2.2 2024-07-28 09:43:34,247 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=55 pTM=0.306 ipTM=0.144 tol=3.54 2024-07-28 09:43:37,271 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.3 pTM=0.31 ipTM=0.173 tol=4.1 2024-07-28 09:43:40,301 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.6 pTM=0.306 ipTM=0.146 tol=9.44 2024-07-28 09:43:43,328 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.9 pTM=0.307 ipTM=0.172 tol=8.98 2024-07-28 09:43:46,355 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.6 pTM=0.307 ipTM=0.163 tol=7.46 2024-07-28 09:43:49,382 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.3 pTM=0.303 ipTM=0.154 tol=7.31 2024-07-28 09:43:52,406 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.9 pTM=0.304 ipTM=0.149 tol=4.21 2024-07-28 09:43:55,436 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.3 pTM=0.307 ipTM=0.154 tol=6.62 2024-07-28 09:43:58,463 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55.5 pTM=0.308 ipTM=0.175 tol=3.27 2024-07-28 09:44:01,487 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.6 pTM=0.301 ipTM=0.139 tol=9.68 2024-07-28 09:44:04,516 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55 pTM=0.313 ipTM=0.175 tol=6.14 2024-07-28 09:44:07,542 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.1 pTM=0.309 ipTM=0.152 tol=5.5 2024-07-28 09:44:10,570 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.8 pTM=0.306 ipTM=0.154 tol=4.64 2024-07-28 09:44:13,597 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.8 pTM=0.303 ipTM=0.141 tol=5 2024-07-28 09:44:16,625 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.9 pTM=0.31 ipTM=0.164 tol=4.2 2024-07-28 09:44:19,651 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.2 pTM=0.313 ipTM=0.176 tol=3.04 2024-07-28 09:44:22,680 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=55.5 pTM=0.302 ipTM=0.125 tol=6.19 2024-07-28 09:44:25,706 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.1 pTM=0.309 ipTM=0.172 tol=4.1 2024-07-28 09:44:28,737 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.5 pTM=0.304 ipTM=0.136 tol=7.5 2024-07-28 09:44:31,763 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.9 pTM=0.308 ipTM=0.161 tol=5.23 2024-07-28 09:44:34,790 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.4 pTM=0.301 ipTM=0.134 tol=3.18 2024-07-28 09:44:34,790 alphafold2_multimer_v3_model_3_seed_000 took 93.9s (30 recycles) 2024-07-28 09:44:37,921 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.2 pTM=0.302 ipTM=0.0878 2024-07-28 09:44:40,950 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54 pTM=0.302 ipTM=0.109 tol=12 2024-07-28 09:44:43,976 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.1 pTM=0.307 ipTM=0.112 tol=8.27 2024-07-28 09:44:47,003 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.8 pTM=0.306 ipTM=0.108 tol=4.96 2024-07-28 09:44:50,032 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.2 pTM=0.307 ipTM=0.0997 tol=2.16 2024-07-28 09:44:53,063 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57 pTM=0.305 ipTM=0.102 tol=2.56 2024-07-28 09:44:56,097 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.3 pTM=0.305 ipTM=0.118 tol=4.27 2024-07-28 09:44:59,127 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56 pTM=0.307 ipTM=0.113 tol=8.48 2024-07-28 09:45:02,158 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.8 pTM=0.305 ipTM=0.103 tol=6.93 2024-07-28 09:45:05,188 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.4 pTM=0.305 ipTM=0.103 tol=7.25 2024-07-28 09:45:08,224 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.9 pTM=0.304 ipTM=0.0947 tol=5.38 2024-07-28 09:45:11,253 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.5 pTM=0.306 ipTM=0.104 tol=6.75 2024-07-28 09:45:14,289 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.2 pTM=0.307 ipTM=0.104 tol=3.01 2024-07-28 09:45:17,318 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.5 pTM=0.306 ipTM=0.113 tol=3.85 2024-07-28 09:45:20,356 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.6 pTM=0.306 ipTM=0.114 tol=3.97 2024-07-28 09:45:23,389 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.1 pTM=0.307 ipTM=0.116 tol=2 2024-07-28 09:45:26,423 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.5 pTM=0.306 ipTM=0.116 tol=2.84 2024-07-28 09:45:29,454 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.8 pTM=0.308 ipTM=0.122 tol=6.43 2024-07-28 09:45:32,485 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.9 pTM=0.307 ipTM=0.131 tol=3.53 2024-07-28 09:45:35,515 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.6 pTM=0.306 ipTM=0.126 tol=3.45 2024-07-28 09:45:38,546 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56 pTM=0.306 ipTM=0.117 tol=8.27 2024-07-28 09:45:41,579 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.5 pTM=0.306 ipTM=0.113 tol=9.95 2024-07-28 09:45:44,615 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.4 pTM=0.306 ipTM=0.115 tol=6.42 2024-07-28 09:45:47,644 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.5 pTM=0.306 ipTM=0.117 tol=3.06 2024-07-28 09:45:50,675 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.9 pTM=0.309 ipTM=0.123 tol=2.31 2024-07-28 09:45:53,702 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.3 pTM=0.307 ipTM=0.115 tol=4.78 2024-07-28 09:45:56,735 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.2 pTM=0.308 ipTM=0.118 tol=5.11 2024-07-28 09:45:59,764 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.5 pTM=0.308 ipTM=0.131 tol=4.91 2024-07-28 09:46:02,800 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.1 pTM=0.308 ipTM=0.125 tol=4.72 2024-07-28 09:46:05,826 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.1 pTM=0.309 ipTM=0.122 tol=2.64 2024-07-28 09:46:08,858 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.8 pTM=0.305 ipTM=0.11 tol=2.22 2024-07-28 09:46:08,858 alphafold2_multimer_v3_model_4_seed_000 took 94.0s (30 recycles) 2024-07-28 09:46:11,995 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.1 pTM=0.299 ipTM=0.0688 2024-07-28 09:46:15,029 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.9 pTM=0.302 ipTM=0.102 tol=15.7 2024-07-28 09:46:18,066 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.9 pTM=0.312 ipTM=0.138 tol=6.4 2024-07-28 09:46:21,099 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.7 pTM=0.312 ipTM=0.131 tol=4.61 2024-07-28 09:46:24,135 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.9 pTM=0.318 ipTM=0.146 tol=2.95 2024-07-28 09:46:27,167 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.1 pTM=0.315 ipTM=0.155 tol=4.32 2024-07-28 09:46:30,203 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.7 pTM=0.316 ipTM=0.163 tol=3.11 2024-07-28 09:46:33,233 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.1 pTM=0.315 ipTM=0.14 tol=3.81 2024-07-28 09:46:36,271 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.2 pTM=0.314 ipTM=0.132 tol=6.22 2024-07-28 09:46:39,301 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.7 pTM=0.317 ipTM=0.159 tol=2.73 2024-07-28 09:46:42,339 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.4 pTM=0.312 ipTM=0.13 tol=3 2024-07-28 09:46:45,371 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55.5 pTM=0.316 ipTM=0.141 tol=2.68 2024-07-28 09:46:48,408 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.5 pTM=0.315 ipTM=0.137 tol=3.23 2024-07-28 09:46:51,440 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.4 pTM=0.314 ipTM=0.142 tol=2.79 2024-07-28 09:46:54,477 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.4 pTM=0.312 ipTM=0.135 tol=2.55 2024-07-28 09:46:57,508 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.2 pTM=0.314 ipTM=0.143 tol=2.17 2024-07-28 09:47:00,542 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.9 pTM=0.315 ipTM=0.155 tol=4.12 2024-07-28 09:47:03,573 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.2 pTM=0.316 ipTM=0.142 tol=4.96 2024-07-28 09:47:06,606 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.2 pTM=0.316 ipTM=0.161 tol=2.71 2024-07-28 09:47:09,638 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.8 pTM=0.314 ipTM=0.142 tol=2.88 2024-07-28 09:47:12,673 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.5 pTM=0.316 ipTM=0.147 tol=3.52 2024-07-28 09:47:15,706 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.5 pTM=0.317 ipTM=0.141 tol=1.82 2024-07-28 09:47:18,739 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.4 pTM=0.312 ipTM=0.135 tol=2.71 2024-07-28 09:47:21,773 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.6 pTM=0.316 ipTM=0.143 tol=2.69 2024-07-28 09:47:24,810 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.6 pTM=0.317 ipTM=0.141 tol=4.76 2024-07-28 09:47:27,841 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.5 pTM=0.313 ipTM=0.127 tol=4.79 2024-07-28 09:47:30,877 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.7 pTM=0.316 ipTM=0.147 tol=5.49 2024-07-28 09:47:33,910 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.7 pTM=0.315 ipTM=0.146 tol=6.5 2024-07-28 09:47:36,945 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.1 pTM=0.318 ipTM=0.161 tol=2.12 2024-07-28 09:47:39,976 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56 pTM=0.317 ipTM=0.151 tol=5.16 2024-07-28 09:47:43,011 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.6 pTM=0.316 ipTM=0.152 tol=5.61 2024-07-28 09:47:43,011 alphafold2_multimer_v3_model_5_seed_000 took 94.1s (30 recycles) 2024-07-28 09:47:43,095 reranking models by 'multimer' metric 2024-07-28 09:47:45,176 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 09:48:02,575 Relaxation took 19.5s 2024-07-28 09:48:02,575 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.6 pTM=0.336 ipTM=0.23 2024-07-28 09:48:10,094 Relaxation took 7.5s 2024-07-28 09:48:10,094 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.8 pTM=0.329 ipTM=0.208 2024-07-28 09:48:23,397 Relaxation took 13.3s 2024-07-28 09:48:23,397 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.6 pTM=0.316 ipTM=0.152 2024-07-28 09:48:37,708 Relaxation took 14.3s 2024-07-28 09:48:37,708 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.4 pTM=0.301 ipTM=0.134 2024-07-28 09:48:47,075 Relaxation took 9.4s 2024-07-28 09:48:47,075 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.8 pTM=0.305 ipTM=0.11 2024-07-28 09:48:47,885 Done