2024-07-28 11:03:23,089 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 11:03:23,453 Running on GPU 2024-07-28 11:03:27,185 Found 6 citations for tools or databases 2024-07-28 11:03:27,185 Query 1/1: ZFP1_FBXW4 (length 820) 2024-07-28 11:03:27,650 Sleeping for 9s. Reason: PENDING 2024-07-28 11:03:37,071 Sleeping for 6s. Reason: RUNNING 2024-07-28 11:03:43,516 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:03:53,935 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:04:04,393 Sleeping for 7s. Reason: RUNNING 2024-07-28 11:04:11,812 Sleeping for 9s. Reason: RUNNING 2024-07-28 11:04:21,239 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:04:31,661 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:04:42,078 Sleeping for 9s. Reason: RUNNING 2024-07-28 11:04:51,487 Sleeping for 5s. Reason: RUNNING 2024-07-28 11:04:56,910 Sleeping for 8s. Reason: RUNNING 2024-07-28 11:05:05,338 Sleeping for 9s. Reason: RUNNING 2024-07-28 11:05:14,753 Sleeping for 9s. Reason: RUNNING 2024-07-28 11:05:24,180 Sleeping for 9s. Reason: RUNNING 2024-07-28 11:05:33,609 Sleeping for 6s. Reason: RUNNING 2024-07-28 11:05:40,055 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:05:50,502 Sleeping for 6s. Reason: RUNNING 2024-07-28 11:05:56,943 Sleeping for 5s. Reason: RUNNING 2024-07-28 11:06:02,374 Sleeping for 8s. Reason: RUNNING 2024-07-28 11:06:10,803 Sleeping for 8s. Reason: RUNNING 2024-07-28 11:06:19,220 Sleeping for 6s. Reason: RUNNING 2024-07-28 11:06:25,667 Sleeping for 7s. Reason: RUNNING 2024-07-28 11:06:33,105 Sleeping for 7s. Reason: RUNNING 2024-07-28 11:06:40,552 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:06:50,973 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:07:01,395 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:07:13,606 Sleeping for 7s. Reason: PENDING 2024-07-28 11:07:21,051 Sleeping for 8s. Reason: PENDING 2024-07-28 11:07:29,479 Sleeping for 7s. Reason: PENDING 2024-07-28 11:07:36,901 Sleeping for 7s. Reason: PENDING 2024-07-28 11:07:44,314 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:07:54,750 Sleeping for 9s. Reason: RUNNING 2024-07-28 11:08:04,182 Sleeping for 7s. Reason: RUNNING 2024-07-28 11:08:11,599 Sleeping for 9s. Reason: RUNNING 2024-07-28 11:08:21,039 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:08:31,474 Sleeping for 7s. Reason: RUNNING 2024-07-28 11:08:38,896 Sleeping for 8s. Reason: RUNNING 2024-07-28 11:08:47,312 Sleeping for 8s. Reason: RUNNING 2024-07-28 11:08:55,754 Sleeping for 6s. Reason: RUNNING 2024-07-28 11:09:02,198 Sleeping for 9s. Reason: RUNNING 2024-07-28 11:09:11,624 Sleeping for 6s. Reason: RUNNING 2024-07-28 11:09:18,032 Sleeping for 7s. Reason: RUNNING 2024-07-28 11:09:25,457 Sleeping for 5s. Reason: RUNNING 2024-07-28 11:09:30,867 Sleeping for 10s. Reason: RUNNING 2024-07-28 11:09:44,777 Setting max_seq=508, max_extra_seq=2048 2024-07-28 11:13:02,084 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.2 pTM=0.524 ipTM=0.186 2024-07-28 11:13:18,834 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.2 pTM=0.516 ipTM=0.182 tol=8.2 2024-07-28 11:13:35,613 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.6 pTM=0.551 ipTM=0.391 tol=8.09 2024-07-28 11:13:52,415 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.6 pTM=0.563 ipTM=0.526 tol=10.2 2024-07-28 11:14:09,244 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.6 pTM=0.532 ipTM=0.233 tol=8.25 2024-07-28 11:14:26,074 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.7 pTM=0.563 ipTM=0.538 tol=7.45 2024-07-28 11:14:42,940 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.9 pTM=0.521 ipTM=0.191 tol=10.2 2024-07-28 11:14:59,807 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62 pTM=0.522 ipTM=0.184 tol=3.6 2024-07-28 11:15:16,687 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.2 pTM=0.519 ipTM=0.166 tol=2.59 2024-07-28 11:15:33,580 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.3 pTM=0.52 ipTM=0.165 tol=1.79 2024-07-28 11:15:50,458 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.2 pTM=0.518 ipTM=0.16 tol=1.42 2024-07-28 11:16:07,355 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.2 pTM=0.521 ipTM=0.172 tol=3.56 2024-07-28 11:16:24,257 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.5 pTM=0.529 ipTM=0.272 tol=5.7 2024-07-28 11:16:41,156 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62 pTM=0.523 ipTM=0.162 tol=5.48 2024-07-28 11:16:58,070 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=63.2 pTM=0.521 ipTM=0.157 tol=3.47 2024-07-28 11:17:14,969 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.9 pTM=0.56 ipTM=0.519 tol=10.1 2024-07-28 11:17:31,880 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.1 pTM=0.521 ipTM=0.156 tol=9.16 2024-07-28 11:17:48,789 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.5 pTM=0.522 ipTM=0.159 tol=5.52 2024-07-28 11:18:05,681 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.2 pTM=0.52 ipTM=0.156 tol=5.13 2024-07-28 11:18:22,588 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.6 pTM=0.522 ipTM=0.199 tol=3.59 2024-07-28 11:18:39,505 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.2 pTM=0.522 ipTM=0.161 tol=2.75 2024-07-28 11:18:56,416 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.6 pTM=0.521 ipTM=0.156 tol=2.91 2024-07-28 11:19:13,309 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.3 pTM=0.541 ipTM=0.424 tol=7.06 2024-07-28 11:19:30,240 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.7 pTM=0.522 ipTM=0.157 tol=6.26 2024-07-28 11:19:47,143 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.3 pTM=0.52 ipTM=0.158 tol=2.83 2024-07-28 11:20:04,062 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.1 pTM=0.547 ipTM=0.495 tol=7.71 2024-07-28 11:20:20,974 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.2 pTM=0.524 ipTM=0.16 tol=6.43 2024-07-28 11:20:37,906 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=59.7 pTM=0.554 ipTM=0.504 tol=9.48 2024-07-28 11:20:54,830 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.5 pTM=0.53 ipTM=0.221 tol=9.13 2024-07-28 11:21:11,741 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.2 pTM=0.543 ipTM=0.278 tol=6.61 2024-07-28 11:21:28,641 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=63.2 pTM=0.547 ipTM=0.357 tol=5.59 2024-07-28 11:21:28,642 alphafold2_multimer_v3_model_1_seed_000 took 697.0s (30 recycles) 2024-07-28 11:21:46,129 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.4 pTM=0.519 ipTM=0.191 2024-07-28 11:22:03,084 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62 pTM=0.512 ipTM=0.161 tol=6.63 2024-07-28 11:22:20,040 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.3 pTM=0.511 ipTM=0.15 tol=4.43 2024-07-28 11:22:37,013 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=64.1 pTM=0.525 ipTM=0.325 tol=4.09 2024-07-28 11:22:53,986 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.4 pTM=0.515 ipTM=0.147 tol=3.62 2024-07-28 11:23:10,960 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.8 pTM=0.519 ipTM=0.15 tol=2.81 2024-07-28 11:23:27,935 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.8 pTM=0.517 ipTM=0.146 tol=2.31 2024-07-28 11:23:44,903 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.5 pTM=0.518 ipTM=0.146 tol=2.38 2024-07-28 11:24:01,861 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.3 pTM=0.518 ipTM=0.148 tol=1.2 2024-07-28 11:24:18,835 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.2 pTM=0.517 ipTM=0.146 tol=1.77 2024-07-28 11:24:35,810 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.6 pTM=0.522 ipTM=0.269 tol=3.03 2024-07-28 11:24:52,780 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.8 pTM=0.524 ipTM=0.239 tol=12.5 2024-07-28 11:25:09,753 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.8 pTM=0.518 ipTM=0.154 tol=9.57 2024-07-28 11:25:26,727 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.3 pTM=0.523 ipTM=0.223 tol=5.37 2024-07-28 11:25:43,689 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.1 pTM=0.519 ipTM=0.151 tol=4.29 2024-07-28 11:26:00,659 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.2 pTM=0.519 ipTM=0.147 tol=3.56 2024-07-28 11:26:17,623 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.9 pTM=0.536 ipTM=0.489 tol=14.4 2024-07-28 11:26:34,616 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.8 pTM=0.52 ipTM=0.148 tol=7.26 2024-07-28 11:26:51,578 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.5 pTM=0.539 ipTM=0.488 tol=12.5 2024-07-28 11:27:08,565 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.2 pTM=0.527 ipTM=0.255 tol=12.1 2024-07-28 11:27:25,544 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.7 pTM=0.519 ipTM=0.147 tol=5.8 2024-07-28 11:27:42,512 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.5 pTM=0.54 ipTM=0.385 tol=10 2024-07-28 11:27:59,491 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.2 pTM=0.528 ipTM=0.311 tol=7.5 2024-07-28 11:28:16,479 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.8 pTM=0.526 ipTM=0.294 tol=13.1 2024-07-28 11:28:33,452 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.7 pTM=0.516 ipTM=0.147 tol=11 2024-07-28 11:28:50,432 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.1 pTM=0.519 ipTM=0.159 tol=4.27 2024-07-28 11:29:07,396 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.4 pTM=0.531 ipTM=0.333 tol=9.05 2024-07-28 11:29:24,378 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.4 pTM=0.517 ipTM=0.156 tol=8.73 2024-07-28 11:29:41,327 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62 pTM=0.54 ipTM=0.406 tol=8.88 2024-07-28 11:29:58,311 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.4 pTM=0.517 ipTM=0.155 tol=7.48 2024-07-28 11:30:15,278 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.4 pTM=0.545 ipTM=0.493 tol=14.5 2024-07-28 11:30:15,279 alphafold2_multimer_v3_model_2_seed_000 took 526.1s (30 recycles) 2024-07-28 11:30:32,766 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.8 pTM=0.549 ipTM=0.415 2024-07-28 11:30:49,771 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.9 pTM=0.517 ipTM=0.193 tol=19.9 2024-07-28 11:31:06,735 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.2 pTM=0.521 ipTM=0.165 tol=7.38 2024-07-28 11:31:23,734 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.5 pTM=0.52 ipTM=0.156 tol=3.38 2024-07-28 11:31:40,699 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.1 pTM=0.522 ipTM=0.185 tol=10.4 2024-07-28 11:31:57,706 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.9 pTM=0.539 ipTM=0.467 tol=11.7 2024-07-28 11:32:14,695 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.2 pTM=0.528 ipTM=0.214 tol=10.5 2024-07-28 11:32:31,694 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.8 pTM=0.538 ipTM=0.441 tol=10.9 2024-07-28 11:32:48,683 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.6 pTM=0.524 ipTM=0.163 tol=10.6 2024-07-28 11:33:05,672 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.9 pTM=0.527 ipTM=0.164 tol=5.9 2024-07-28 11:33:22,658 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63 pTM=0.549 ipTM=0.542 tol=7.25 2024-07-28 11:33:39,629 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.9 pTM=0.527 ipTM=0.17 tol=12.4 2024-07-28 11:33:56,590 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.5 pTM=0.524 ipTM=0.165 tol=8.09 2024-07-28 11:34:13,558 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.5 pTM=0.541 ipTM=0.382 tol=7.2 2024-07-28 11:34:30,515 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.3 pTM=0.533 ipTM=0.232 tol=10.4 2024-07-28 11:34:47,481 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.9 pTM=0.526 ipTM=0.158 tol=5.84 2024-07-28 11:35:04,412 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62 pTM=0.536 ipTM=0.306 tol=6 2024-07-28 11:35:21,386 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.7 pTM=0.528 ipTM=0.163 tol=6.55 2024-07-28 11:35:38,350 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.7 pTM=0.53 ipTM=0.235 tol=12.1 2024-07-28 11:35:55,306 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.2 pTM=0.526 ipTM=0.16 tol=7.08 2024-07-28 11:36:12,266 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63 pTM=0.528 ipTM=0.161 tol=4.44 2024-07-28 11:36:29,232 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.9 pTM=0.526 ipTM=0.159 tol=1.92 2024-07-28 11:36:46,176 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.6 pTM=0.527 ipTM=0.16 tol=2.14 2024-07-28 11:37:03,139 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.9 pTM=0.528 ipTM=0.16 tol=1.88 2024-07-28 11:37:20,102 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.1 pTM=0.524 ipTM=0.154 tol=2.32 2024-07-28 11:37:37,073 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.7 pTM=0.53 ipTM=0.198 tol=2.91 2024-07-28 11:37:54,025 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62 pTM=0.532 ipTM=0.243 tol=11.6 2024-07-28 11:38:11,006 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.3 pTM=0.534 ipTM=0.315 tol=10.2 2024-07-28 11:38:27,956 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.9 pTM=0.528 ipTM=0.165 tol=8.43 2024-07-28 11:38:44,919 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.6 pTM=0.526 ipTM=0.157 tol=3.37 2024-07-28 11:39:01,905 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.8 pTM=0.526 ipTM=0.156 tol=1.93 2024-07-28 11:39:01,906 alphafold2_multimer_v3_model_3_seed_000 took 526.1s (30 recycles) 2024-07-28 11:39:19,417 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.8 pTM=0.545 ipTM=0.432 2024-07-28 11:39:36,402 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.2 pTM=0.522 ipTM=0.161 tol=6.64 2024-07-28 11:39:53,377 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=63.9 pTM=0.518 ipTM=0.153 tol=10.4 2024-07-28 11:40:10,373 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=63.9 pTM=0.521 ipTM=0.142 tol=5.4 2024-07-28 11:40:27,366 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.4 pTM=0.52 ipTM=0.156 tol=4.55 2024-07-28 11:40:44,361 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.1 pTM=0.52 ipTM=0.145 tol=5.23 2024-07-28 11:41:01,394 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.4 pTM=0.518 ipTM=0.134 tol=12.8 2024-07-28 11:41:18,382 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64 pTM=0.52 ipTM=0.137 tol=6.17 2024-07-28 11:41:35,361 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=63 pTM=0.52 ipTM=0.141 tol=5.18 2024-07-28 11:41:52,351 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=63.2 pTM=0.521 ipTM=0.143 tol=4.16 2024-07-28 11:42:09,332 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=63.6 pTM=0.52 ipTM=0.142 tol=3.09 2024-07-28 11:42:26,289 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.8 pTM=0.535 ipTM=0.292 tol=9.6 2024-07-28 11:42:43,267 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=63.7 pTM=0.519 ipTM=0.135 tol=8.34 2024-07-28 11:43:00,256 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=63.4 pTM=0.524 ipTM=0.149 tol=7.77 2024-07-28 11:43:17,236 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=63.2 pTM=0.524 ipTM=0.149 tol=3.94 2024-07-28 11:43:34,216 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=63.1 pTM=0.522 ipTM=0.146 tol=3.42 2024-07-28 11:43:51,176 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.9 pTM=0.526 ipTM=0.161 tol=11.5 2024-07-28 11:44:08,160 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=63.1 pTM=0.522 ipTM=0.153 tol=7.86 2024-07-28 11:44:25,133 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=63.5 pTM=0.522 ipTM=0.151 tol=5.57 2024-07-28 11:44:42,130 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=63.9 pTM=0.519 ipTM=0.136 tol=6.22 2024-07-28 11:44:59,112 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=63.4 pTM=0.524 ipTM=0.146 tol=3.11 2024-07-28 11:45:16,089 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=63.1 pTM=0.521 ipTM=0.15 tol=3.83 2024-07-28 11:45:33,046 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.7 pTM=0.524 ipTM=0.15 tol=4.29 2024-07-28 11:45:50,031 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=63.2 pTM=0.522 ipTM=0.146 tol=2.81 2024-07-28 11:46:07,002 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=63.4 pTM=0.521 ipTM=0.142 tol=3.19 2024-07-28 11:46:23,973 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=63.2 pTM=0.523 ipTM=0.166 tol=3.93 2024-07-28 11:46:40,944 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=63 pTM=0.523 ipTM=0.152 tol=3.12 2024-07-28 11:46:57,913 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.8 pTM=0.525 ipTM=0.156 tol=2.39 2024-07-28 11:47:14,870 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.9 pTM=0.524 ipTM=0.158 tol=1.64 2024-07-28 11:47:31,842 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.9 pTM=0.525 ipTM=0.154 tol=2.15 2024-07-28 11:47:48,803 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.8 pTM=0.525 ipTM=0.16 tol=3.34 2024-07-28 11:47:48,804 alphafold2_multimer_v3_model_4_seed_000 took 526.4s (30 recycles) 2024-07-28 11:48:06,282 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.5 pTM=0.533 ipTM=0.552 2024-07-28 11:48:23,265 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.8 pTM=0.516 ipTM=0.161 tol=5.9 2024-07-28 11:48:40,251 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.9 pTM=0.524 ipTM=0.25 tol=6.5 2024-07-28 11:48:57,267 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.7 pTM=0.52 ipTM=0.153 tol=3.83 2024-07-28 11:49:14,257 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.6 pTM=0.549 ipTM=0.482 tol=8.52 2024-07-28 11:49:31,277 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.1 pTM=0.522 ipTM=0.153 tol=7.15 2024-07-28 11:49:48,276 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.8 pTM=0.526 ipTM=0.156 tol=3.67 2024-07-28 11:50:05,289 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.6 pTM=0.525 ipTM=0.157 tol=3.47 2024-07-28 11:50:22,296 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63 pTM=0.528 ipTM=0.158 tol=3.17 2024-07-28 11:50:39,318 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63 pTM=0.532 ipTM=0.277 tol=2.68 2024-07-28 11:50:56,325 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63 pTM=0.527 ipTM=0.155 tol=2.98 2024-07-28 11:51:13,329 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.6 pTM=0.531 ipTM=0.183 tol=3.13 2024-07-28 11:51:30,322 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.4 pTM=0.527 ipTM=0.153 tol=3.02 2024-07-28 11:51:47,339 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.8 pTM=0.54 ipTM=0.364 tol=4.36 2024-07-28 11:52:04,365 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.6 pTM=0.529 ipTM=0.156 tol=3.42 2024-07-28 11:52:21,367 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.8 pTM=0.53 ipTM=0.158 tol=3.76 2024-07-28 11:52:38,362 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.9 pTM=0.532 ipTM=0.224 tol=3.54 2024-07-28 11:52:55,377 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.5 pTM=0.528 ipTM=0.152 tol=3.04 2024-07-28 11:53:12,378 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.1 pTM=0.527 ipTM=0.152 tol=3.37 2024-07-28 11:53:29,394 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.6 pTM=0.53 ipTM=0.156 tol=3.77 2024-07-28 11:53:46,397 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.7 pTM=0.531 ipTM=0.181 tol=3.45 2024-07-28 11:54:03,396 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.4 pTM=0.529 ipTM=0.157 tol=3.56 2024-07-28 11:54:20,401 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.5 pTM=0.542 ipTM=0.424 tol=5.66 2024-07-28 11:54:37,446 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.3 pTM=0.528 ipTM=0.152 tol=5.68 2024-07-28 11:54:54,452 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63 pTM=0.528 ipTM=0.158 tol=2.95 2024-07-28 11:55:11,467 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.2 pTM=0.532 ipTM=0.203 tol=3.58 2024-07-28 11:55:28,476 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.2 pTM=0.527 ipTM=0.153 tol=3.67 2024-07-28 11:55:45,492 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.1 pTM=0.529 ipTM=0.156 tol=4.36 2024-07-28 11:56:02,488 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63 pTM=0.529 ipTM=0.158 tol=3.04 2024-07-28 11:56:19,499 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63 pTM=0.532 ipTM=0.203 tol=2.56 2024-07-28 11:56:36,504 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.4 pTM=0.529 ipTM=0.155 tol=4.13 2024-07-28 11:56:36,505 alphafold2_multimer_v3_model_5_seed_000 took 527.2s (30 recycles) 2024-07-28 11:56:37,047 reranking models by 'multimer' metric 2024-07-28 11:56:39,426 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 11:58:58,319 Relaxation took 141.3s 2024-07-28 11:58:58,320 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.4 pTM=0.545 ipTM=0.493 2024-07-28 12:01:55,530 Relaxation took 177.2s 2024-07-28 12:01:55,530 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=63.2 pTM=0.547 ipTM=0.357 2024-07-28 12:03:48,473 Relaxation took 112.9s 2024-07-28 12:03:48,474 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.8 pTM=0.525 ipTM=0.16 2024-07-28 12:05:38,795 Relaxation took 110.3s 2024-07-28 12:05:38,795 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.8 pTM=0.526 ipTM=0.156 2024-07-28 12:06:23,160 Relaxation took 44.4s 2024-07-28 12:06:23,161 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.4 pTM=0.529 ipTM=0.155 2024-07-28 12:06:24,873 Done