2024-07-28 11:14:35,575 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 11:14:35,873 Running on GPU
2024-07-28 11:14:38,387 Found 6 citations for tools or databases
2024-07-28 11:14:38,387 Query 1/1: ZFP1_NEURL2 (length 693)
2024-07-28 11:14:38,826 Sleeping for 5s. Reason: PENDING
2024-07-28 11:14:44,241 Sleeping for 5s. Reason: RUNNING
2024-07-28 11:14:49,663 Sleeping for 5s. Reason: RUNNING
2024-07-28 11:14:55,098 Sleeping for 10s. Reason: RUNNING
2024-07-28 11:15:05,516 Sleeping for 8s. Reason: RUNNING
2024-07-28 11:15:13,934 Sleeping for 10s. Reason: RUNNING
2024-07-28 11:15:24,345 Sleeping for 5s. Reason: RUNNING
2024-07-28 11:15:29,754 Sleeping for 7s. Reason: RUNNING
2024-07-28 11:15:37,179 Sleeping for 5s. Reason: RUNNING
2024-07-28 11:15:42,594 Sleeping for 6s. Reason: RUNNING
2024-07-28 11:15:49,008 Sleeping for 7s. Reason: RUNNING
2024-07-28 11:15:56,428 Sleeping for 5s. Reason: RUNNING
2024-07-28 11:16:01,877 Sleeping for 8s. Reason: RUNNING
2024-07-28 11:16:10,292 Sleeping for 7s. Reason: RUNNING
2024-07-28 11:16:17,737 Sleeping for 10s. Reason: RUNNING
2024-07-28 11:16:28,162 Sleeping for 8s. Reason: RUNNING
2024-07-28 11:16:36,586 Sleeping for 10s. Reason: RUNNING
2024-07-28 11:16:47,018 Sleeping for 6s. Reason: RUNNING
2024-07-28 11:16:53,426 Sleeping for 7s. Reason: RUNNING
2024-07-28 11:17:00,839 Sleeping for 8s. Reason: RUNNING
2024-07-28 11:17:11,072 Sleeping for 7s. Reason: PENDING
2024-07-28 11:17:18,490 Sleeping for 10s. Reason: RUNNING
2024-07-28 11:17:28,945 Sleeping for 8s. Reason: RUNNING
2024-07-28 11:17:37,406 Sleeping for 8s. Reason: RUNNING
2024-07-28 11:17:45,850 Sleeping for 6s. Reason: RUNNING
2024-07-28 11:17:52,269 Sleeping for 6s. Reason: RUNNING
2024-07-28 11:17:58,690 Sleeping for 9s. Reason: RUNNING
2024-07-28 11:18:08,134 Sleeping for 7s. Reason: RUNNING
2024-07-28 11:18:15,569 Sleeping for 8s. Reason: RUNNING
2024-07-28 11:18:26,508 Setting max_seq=508, max_extra_seq=2048
2024-07-28 11:21:50,734 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.9 pTM=0.399 ipTM=0.225
2024-07-28 11:22:00,298 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.2 pTM=0.461 ipTM=0.516 tol=6.07
2024-07-28 11:22:09,885 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56 pTM=0.453 ipTM=0.47 tol=3.09
2024-07-28 11:22:19,505 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56 pTM=0.451 ipTM=0.486 tol=2.01
2024-07-28 11:22:29,128 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.4 pTM=0.445 ipTM=0.496 tol=1.99
2024-07-28 11:22:38,731 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.7 pTM=0.442 ipTM=0.474 tol=1.25
2024-07-28 11:22:48,356 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.5 pTM=0.439 ipTM=0.449 tol=1.15
2024-07-28 11:22:57,974 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.4 pTM=0.441 ipTM=0.465 tol=1.34
2024-07-28 11:23:07,592 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56 pTM=0.446 ipTM=0.512 tol=1.54
2024-07-28 11:23:17,212 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.3 pTM=0.448 ipTM=0.526 tol=1.36
2024-07-28 11:23:26,859 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.6 pTM=0.449 ipTM=0.52 tol=1.42
2024-07-28 11:23:36,495 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.7 pTM=0.45 ipTM=0.529 tol=1.8
2024-07-28 11:23:46,130 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57 pTM=0.448 ipTM=0.543 tol=2.03
2024-07-28 11:23:55,762 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.5 pTM=0.446 ipTM=0.519 tol=1.66
2024-07-28 11:24:05,405 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.7 pTM=0.451 ipTM=0.54 tol=1.49
2024-07-28 11:24:15,038 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57 pTM=0.45 ipTM=0.553 tol=0.897
2024-07-28 11:24:24,698 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.4 pTM=0.45 ipTM=0.545 tol=1.54
2024-07-28 11:24:34,374 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.4 pTM=0.453 ipTM=0.567 tol=1.09
2024-07-28 11:24:44,036 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.6 pTM=0.454 ipTM=0.573 tol=1.77
2024-07-28 11:24:53,703 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.5 pTM=0.449 ipTM=0.526 tol=1.1
2024-07-28 11:25:03,384 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.2 pTM=0.447 ipTM=0.511 tol=1.17
2024-07-28 11:25:13,066 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.2 pTM=0.446 ipTM=0.507 tol=0.892
2024-07-28 11:25:22,754 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.8 pTM=0.441 ipTM=0.483 tol=1.03
2024-07-28 11:25:32,438 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.8 pTM=0.442 ipTM=0.466 tol=1.29
2024-07-28 11:25:42,129 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.2 pTM=0.435 ipTM=0.373 tol=1.28
2024-07-28 11:25:51,824 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56 pTM=0.431 ipTM=0.253 tol=1.2
2024-07-28 11:26:01,528 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.9 pTM=0.431 ipTM=0.237 tol=1.24
2024-07-28 11:26:11,228 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.3 pTM=0.434 ipTM=0.237 tol=1.29
2024-07-28 11:26:20,937 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.2 pTM=0.431 ipTM=0.215 tol=1.23
2024-07-28 11:26:30,635 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=55.7 pTM=0.431 ipTM=0.206 tol=1.07
2024-07-28 11:26:40,330 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56 pTM=0.43 ipTM=0.203 tol=1.12
2024-07-28 11:26:40,331 alphafold2_multimer_v3_model_1_seed_000 took 489.6s (30 recycles)
2024-07-28 11:26:50,300 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.9 pTM=0.419 ipTM=0.3
2024-07-28 11:26:59,961 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.2 pTM=0.431 ipTM=0.231 tol=5.69
2024-07-28 11:27:09,641 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.5 pTM=0.443 ipTM=0.234 tol=5.48
2024-07-28 11:27:19,310 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.8 pTM=0.435 ipTM=0.202 tol=2.31
2024-07-28 11:27:29,009 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.1 pTM=0.432 ipTM=0.23 tol=2.5
2024-07-28 11:27:38,695 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.9 pTM=0.43 ipTM=0.194 tol=2.11
2024-07-28 11:27:48,380 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.5 pTM=0.431 ipTM=0.219 tol=2.27
2024-07-28 11:27:58,066 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.7 pTM=0.429 ipTM=0.201 tol=2.2
2024-07-28 11:28:07,733 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.4 pTM=0.431 ipTM=0.236 tol=1.68
2024-07-28 11:28:17,427 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.5 pTM=0.428 ipTM=0.202 tol=1.44
2024-07-28 11:28:27,118 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=56.2 pTM=0.433 ipTM=0.224 tol=1.56
2024-07-28 11:28:36,795 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.1 pTM=0.431 ipTM=0.198 tol=2.05
2024-07-28 11:28:46,491 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.4 pTM=0.43 ipTM=0.21 tol=1.89
2024-07-28 11:28:56,166 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57 pTM=0.431 ipTM=0.202 tol=1.78
2024-07-28 11:29:05,846 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.2 pTM=0.433 ipTM=0.221 tol=1.82
2024-07-28 11:29:15,515 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.2 pTM=0.432 ipTM=0.208 tol=1.76
2024-07-28 11:29:25,197 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.3 pTM=0.433 ipTM=0.222 tol=2.06
2024-07-28 11:29:34,880 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57 pTM=0.433 ipTM=0.206 tol=2.42
2024-07-28 11:29:44,581 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.8 pTM=0.433 ipTM=0.227 tol=3.57
2024-07-28 11:29:54,244 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.7 pTM=0.43 ipTM=0.216 tol=2.28
2024-07-28 11:30:03,931 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.8 pTM=0.433 ipTM=0.234 tol=4.11
2024-07-28 11:30:13,605 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.7 pTM=0.431 ipTM=0.213 tol=3.23
2024-07-28 11:30:23,284 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.8 pTM=0.433 ipTM=0.223 tol=2.41
2024-07-28 11:30:32,970 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.3 pTM=0.432 ipTM=0.203 tol=1.39
2024-07-28 11:30:42,656 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.5 pTM=0.433 ipTM=0.211 tol=2.4
2024-07-28 11:30:52,335 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.2 pTM=0.433 ipTM=0.2 tol=1.77
2024-07-28 11:31:02,030 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.7 pTM=0.435 ipTM=0.222 tol=1.64
2024-07-28 11:31:11,698 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.2 pTM=0.433 ipTM=0.214 tol=2.39
2024-07-28 11:31:21,381 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.8 pTM=0.433 ipTM=0.225 tol=2.14
2024-07-28 11:31:31,077 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.8 pTM=0.431 ipTM=0.2 tol=2.14
2024-07-28 11:31:40,774 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.7 pTM=0.435 ipTM=0.221 tol=1.92
2024-07-28 11:31:40,775 alphafold2_multimer_v3_model_2_seed_000 took 300.1s (30 recycles)
2024-07-28 11:31:50,789 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.2 pTM=0.405 ipTM=0.181
2024-07-28 11:32:00,513 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.3 pTM=0.459 ipTM=0.625 tol=16.5
2024-07-28 11:32:10,226 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.8 pTM=0.453 ipTM=0.56 tol=4.16
2024-07-28 11:32:19,953 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59 pTM=0.445 ipTM=0.507 tol=4.54
2024-07-28 11:32:29,680 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59 pTM=0.44 ipTM=0.512 tol=4.88
2024-07-28 11:32:39,398 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.6 pTM=0.438 ipTM=0.532 tol=5.66
2024-07-28 11:32:49,117 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.9 pTM=0.441 ipTM=0.553 tol=2.45
2024-07-28 11:32:58,846 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.8 pTM=0.44 ipTM=0.584 tol=3.17
2024-07-28 11:33:08,563 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.4 pTM=0.438 ipTM=0.563 tol=3.31
2024-07-28 11:33:18,287 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.9 pTM=0.436 ipTM=0.552 tol=2.33
2024-07-28 11:33:28,021 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.8 pTM=0.438 ipTM=0.555 tol=1.83
2024-07-28 11:33:37,745 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59 pTM=0.439 ipTM=0.587 tol=2.18
2024-07-28 11:33:47,474 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.8 pTM=0.438 ipTM=0.571 tol=2.08
2024-07-28 11:33:57,185 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.7 pTM=0.438 ipTM=0.575 tol=2.04
2024-07-28 11:34:06,880 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.2 pTM=0.44 ipTM=0.575 tol=1.81
2024-07-28 11:34:16,597 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.2 pTM=0.438 ipTM=0.565 tol=1.63
2024-07-28 11:34:26,298 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.5 pTM=0.441 ipTM=0.566 tol=1.76
2024-07-28 11:34:36,017 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.5 pTM=0.438 ipTM=0.575 tol=1.61
2024-07-28 11:34:45,730 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.8 pTM=0.442 ipTM=0.585 tol=1.93
2024-07-28 11:34:55,469 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.7 pTM=0.439 ipTM=0.582 tol=2.25
2024-07-28 11:35:05,179 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.1 pTM=0.439 ipTM=0.561 tol=1.84
2024-07-28 11:35:14,905 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.2 pTM=0.437 ipTM=0.558 tol=1.2
2024-07-28 11:35:24,647 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.2 pTM=0.437 ipTM=0.542 tol=1.41
2024-07-28 11:35:34,391 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.2 pTM=0.438 ipTM=0.557 tol=1.86
2024-07-28 11:35:44,133 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.6 pTM=0.441 ipTM=0.552 tol=1.46
2024-07-28 11:35:53,876 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58 pTM=0.437 ipTM=0.53 tol=1.2
2024-07-28 11:36:03,603 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.7 pTM=0.438 ipTM=0.526 tol=1.45
2024-07-28 11:36:13,342 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.1 pTM=0.438 ipTM=0.542 tol=1.17
2024-07-28 11:36:23,070 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.1 pTM=0.438 ipTM=0.536 tol=1.83
2024-07-28 11:36:32,818 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.3 pTM=0.438 ipTM=0.534 tol=1.69
2024-07-28 11:36:42,579 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.8 pTM=0.442 ipTM=0.545 tol=1.42
2024-07-28 11:36:42,580 alphafold2_multimer_v3_model_3_seed_000 took 301.5s (30 recycles)
2024-07-28 11:36:52,577 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.3 pTM=0.41 ipTM=0.184
2024-07-28 11:37:02,313 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.6 pTM=0.448 ipTM=0.268 tol=7.62
2024-07-28 11:37:12,058 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.1 pTM=0.456 ipTM=0.397 tol=6.34
2024-07-28 11:37:21,804 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.1 pTM=0.437 ipTM=0.272 tol=5.3
2024-07-28 11:37:31,552 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61 pTM=0.438 ipTM=0.24 tol=3.84
2024-07-28 11:37:41,284 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.5 pTM=0.43 ipTM=0.214 tol=2.16
2024-07-28 11:37:51,023 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61 pTM=0.429 ipTM=0.192 tol=2.28
2024-07-28 11:38:00,782 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.2 pTM=0.429 ipTM=0.181 tol=2.44
2024-07-28 11:38:10,512 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.8 pTM=0.427 ipTM=0.2 tol=3.04
2024-07-28 11:38:20,255 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.4 pTM=0.427 ipTM=0.181 tol=2.38
2024-07-28 11:38:30,010 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.6 pTM=0.43 ipTM=0.215 tol=2.12
2024-07-28 11:38:39,770 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.1 pTM=0.429 ipTM=0.201 tol=3.92
2024-07-28 11:38:49,484 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61 pTM=0.43 ipTM=0.195 tol=4.91
2024-07-28 11:38:59,205 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.8 pTM=0.428 ipTM=0.196 tol=2.97
2024-07-28 11:39:08,943 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.3 pTM=0.428 ipTM=0.2 tol=1.63
2024-07-28 11:39:18,684 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.7 pTM=0.427 ipTM=0.171 tol=1.34
2024-07-28 11:39:28,432 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.3 pTM=0.427 ipTM=0.193 tol=1.95
2024-07-28 11:39:38,192 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.4 pTM=0.429 ipTM=0.213 tol=1.85
2024-07-28 11:39:47,932 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.3 pTM=0.429 ipTM=0.212 tol=2.3
2024-07-28 11:39:57,688 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61 pTM=0.428 ipTM=0.18 tol=1.28
2024-07-28 11:40:07,424 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.3 pTM=0.428 ipTM=0.206 tol=3.45
2024-07-28 11:40:17,188 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61 pTM=0.431 ipTM=0.233 tol=3.15
2024-07-28 11:40:26,938 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.1 pTM=0.43 ipTM=0.206 tol=2.99
2024-07-28 11:40:36,686 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59.8 pTM=0.43 ipTM=0.216 tol=3.25
2024-07-28 11:40:46,458 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.7 pTM=0.43 ipTM=0.221 tol=4.8
2024-07-28 11:40:56,194 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=61 pTM=0.428 ipTM=0.207 tol=2.38
2024-07-28 11:41:05,959 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.4 pTM=0.429 ipTM=0.21 tol=1.99
2024-07-28 11:41:15,722 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61 pTM=0.427 ipTM=0.214 tol=1.82
2024-07-28 11:41:25,477 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.1 pTM=0.427 ipTM=0.219 tol=1.66
2024-07-28 11:41:35,239 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.3 pTM=0.428 ipTM=0.196 tol=2.72
2024-07-28 11:41:44,998 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.2 pTM=0.426 ipTM=0.207 tol=2.88
2024-07-28 11:41:44,998 alphafold2_multimer_v3_model_4_seed_000 took 302.1s (30 recycles)
2024-07-28 11:41:55,010 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56 pTM=0.421 ipTM=0.245
2024-07-28 11:42:04,761 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.1 pTM=0.448 ipTM=0.29 tol=7.98
2024-07-28 11:42:14,488 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.6 pTM=0.434 ipTM=0.244 tol=5.6
2024-07-28 11:42:24,253 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.6 pTM=0.445 ipTM=0.203 tol=5.09
2024-07-28 11:42:33,998 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.2 pTM=0.436 ipTM=0.199 tol=3.97
2024-07-28 11:42:43,741 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.5 pTM=0.428 ipTM=0.172 tol=2.8
2024-07-28 11:42:53,513 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.4 pTM=0.43 ipTM=0.203 tol=3.61
2024-07-28 11:43:03,263 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.2 pTM=0.424 ipTM=0.174 tol=3.02
2024-07-28 11:43:13,041 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.2 pTM=0.429 ipTM=0.19 tol=2.13
2024-07-28 11:43:22,792 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.6 pTM=0.426 ipTM=0.19 tol=2.49
2024-07-28 11:43:32,558 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.2 pTM=0.433 ipTM=0.202 tol=3.86
2024-07-28 11:43:42,326 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.2 pTM=0.426 ipTM=0.17 tol=3.34
2024-07-28 11:43:52,066 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.5 pTM=0.429 ipTM=0.196 tol=3.09
2024-07-28 11:44:01,815 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.2 pTM=0.425 ipTM=0.173 tol=4.12
2024-07-28 11:44:11,552 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.3 pTM=0.43 ipTM=0.205 tol=3.54
2024-07-28 11:44:21,294 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.3 pTM=0.426 ipTM=0.177 tol=2.95
2024-07-28 11:44:31,049 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.6 pTM=0.43 ipTM=0.201 tol=2.45
2024-07-28 11:44:40,785 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.3 pTM=0.428 ipTM=0.182 tol=2.4
2024-07-28 11:44:50,519 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.6 pTM=0.433 ipTM=0.193 tol=3.18
2024-07-28 11:45:00,251 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.2 pTM=0.432 ipTM=0.173 tol=1.93
2024-07-28 11:45:09,967 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.2 pTM=0.431 ipTM=0.181 tol=2.37
2024-07-28 11:45:19,707 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.8 pTM=0.429 ipTM=0.169 tol=4.05
2024-07-28 11:45:29,451 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.9 pTM=0.43 ipTM=0.204 tol=3.45
2024-07-28 11:45:39,202 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.3 pTM=0.426 ipTM=0.179 tol=2.72
2024-07-28 11:45:48,948 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.8 pTM=0.427 ipTM=0.192 tol=2.83
2024-07-28 11:45:58,688 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.7 pTM=0.43 ipTM=0.168 tol=2.8
2024-07-28 11:46:08,428 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.6 pTM=0.43 ipTM=0.19 tol=2.74
2024-07-28 11:46:18,151 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.1 pTM=0.426 ipTM=0.184 tol=3.93
2024-07-28 11:46:27,907 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.1 pTM=0.431 ipTM=0.203 tol=3.72
2024-07-28 11:46:37,656 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.8 pTM=0.427 ipTM=0.182 tol=3.55
2024-07-28 11:46:47,398 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.4 pTM=0.429 ipTM=0.201 tol=3.61
2024-07-28 11:46:47,399 alphafold2_multimer_v3_model_5_seed_000 took 302.1s (30 recycles)
2024-07-28 11:46:47,706 reranking models by 'multimer' metric
2024-07-28 11:46:50,832 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 11:47:43,947 Relaxation took 56.2s
2024-07-28 11:47:43,947 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.8 pTM=0.442 ipTM=0.545
2024-07-28 11:48:20,879 Relaxation took 36.9s
2024-07-28 11:48:20,879 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.7 pTM=0.435 ipTM=0.221
2024-07-28 11:49:17,164 Relaxation took 56.3s
2024-07-28 11:49:17,164 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.2 pTM=0.426 ipTM=0.207
2024-07-28 11:50:15,971 Relaxation took 58.8s
2024-07-28 11:50:15,971 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56 pTM=0.43 ipTM=0.203
2024-07-28 11:51:27,617 Relaxation took 71.6s
2024-07-28 11:51:27,618 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.4 pTM=0.429 ipTM=0.201
2024-07-28 11:51:28,865 Done