2024-07-28 12:16:23,107 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 12:16:23,426 Running on GPU 2024-07-28 12:16:24,209 Found 6 citations for tools or databases 2024-07-28 12:16:24,209 Query 1/1: ZFP36L1_FBXO34 (length 1118) 2024-07-28 12:16:24,626 Sleeping for 10s. Reason: PENDING 2024-07-28 12:16:35,071 Sleeping for 6s. Reason: RUNNING 2024-07-28 12:16:41,536 Sleeping for 8s. Reason: RUNNING 2024-07-28 12:16:49,953 Sleeping for 10s. Reason: RUNNING 2024-07-28 12:17:00,378 Sleeping for 6s. Reason: RUNNING 2024-07-28 12:17:06,857 Sleeping for 8s. Reason: RUNNING 2024-07-28 12:17:15,277 Sleeping for 9s. Reason: RUNNING 2024-07-28 12:17:24,722 Sleeping for 5s. Reason: RUNNING 2024-07-28 12:17:30,152 Sleeping for 6s. Reason: RUNNING 2024-07-28 12:17:36,570 Sleeping for 6s. Reason: RUNNING 2024-07-28 12:17:43,005 Sleeping for 7s. Reason: RUNNING 2024-07-28 12:17:51,962 Sleeping for 7s. Reason: PENDING 2024-07-28 12:17:59,384 Sleeping for 10s. Reason: RUNNING 2024-07-28 12:18:09,847 Sleeping for 6s. Reason: RUNNING 2024-07-28 12:18:16,283 Sleeping for 8s. Reason: RUNNING 2024-07-28 12:18:24,704 Sleeping for 8s. Reason: RUNNING 2024-07-28 12:18:33,125 Sleeping for 7s. Reason: RUNNING 2024-07-28 12:18:40,565 Sleeping for 7s. Reason: RUNNING 2024-07-28 12:18:50,284 Setting max_seq=508, max_extra_seq=2048 2024-07-28 12:22:09,539 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=24.6 pTM=0.224 ipTM=0.174 2024-07-28 12:22:37,599 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=26.4 pTM=0.218 ipTM=0.162 tol=14.3 2024-07-28 12:23:05,800 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=26.4 pTM=0.21 ipTM=0.158 tol=7.9 2024-07-28 12:23:34,106 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=27.2 pTM=0.212 ipTM=0.158 tol=7.19 2024-07-28 12:24:02,505 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=27.1 pTM=0.207 ipTM=0.155 tol=4.03 2024-07-28 12:24:30,929 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=27 pTM=0.21 ipTM=0.157 tol=7.21 2024-07-28 12:24:59,386 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=27.1 pTM=0.209 ipTM=0.158 tol=9.55 2024-07-28 12:25:27,885 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=27.1 pTM=0.21 ipTM=0.156 tol=13 2024-07-28 12:25:56,370 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=27.5 pTM=0.214 ipTM=0.158 tol=10.8 2024-07-28 12:26:24,833 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=27.3 pTM=0.212 ipTM=0.157 tol=10.2 2024-07-28 12:26:53,332 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=27.2 pTM=0.211 ipTM=0.156 tol=10 2024-07-28 12:27:21,845 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=27.3 pTM=0.211 ipTM=0.151 tol=5.92 2024-07-28 12:27:50,346 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=27.5 pTM=0.211 ipTM=0.15 tol=6.78 2024-07-28 12:28:18,839 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=27.5 pTM=0.216 ipTM=0.155 tol=6.19 2024-07-28 12:28:47,316 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=27.5 pTM=0.211 ipTM=0.153 tol=6.06 2024-07-28 12:29:15,779 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=27.3 pTM=0.211 ipTM=0.151 tol=4.48 2024-07-28 12:29:44,260 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=27.2 pTM=0.21 ipTM=0.152 tol=4.42 2024-07-28 12:30:12,776 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=27.5 pTM=0.211 ipTM=0.154 tol=3.21 2024-07-28 12:30:41,291 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=27.5 pTM=0.21 ipTM=0.154 tol=5.19 2024-07-28 12:31:09,774 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=27.3 pTM=0.211 ipTM=0.154 tol=5.5 2024-07-28 12:31:38,250 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=27.3 pTM=0.211 ipTM=0.156 tol=4.2 2024-07-28 12:32:06,734 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=27.4 pTM=0.211 ipTM=0.155 tol=3.16 2024-07-28 12:32:35,206 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=27.8 pTM=0.21 ipTM=0.15 tol=4.12 2024-07-28 12:33:03,672 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=27.7 pTM=0.211 ipTM=0.15 tol=5.99 2024-07-28 12:33:32,112 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=27.7 pTM=0.208 ipTM=0.151 tol=5.64 2024-07-28 12:34:00,580 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=27.6 pTM=0.209 ipTM=0.149 tol=4.92 2024-07-28 12:34:29,069 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=27.5 pTM=0.208 ipTM=0.152 tol=5.67 2024-07-28 12:34:57,585 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=27.3 pTM=0.21 ipTM=0.153 tol=5.79 2024-07-28 12:35:26,063 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=27.6 pTM=0.21 ipTM=0.153 tol=6.1 2024-07-28 12:35:54,540 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=27.4 pTM=0.21 ipTM=0.151 tol=5.84 2024-07-28 12:36:23,004 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=27.4 pTM=0.209 ipTM=0.152 tol=3.2 2024-07-28 12:36:23,005 alphafold2_multimer_v3_model_1_seed_000 took 1048.5s (30 recycles) 2024-07-28 12:36:52,022 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=25.2 pTM=0.221 ipTM=0.158 2024-07-28 12:37:20,346 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=27.3 pTM=0.219 ipTM=0.161 tol=21.4 2024-07-28 12:37:48,704 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=27.1 pTM=0.213 ipTM=0.153 tol=9.13 2024-07-28 12:38:17,124 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=29.4 pTM=0.234 ipTM=0.157 tol=9.55 2024-07-28 12:38:45,559 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=29.6 pTM=0.234 ipTM=0.152 tol=8.42 2024-07-28 12:39:13,986 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=29.8 pTM=0.233 ipTM=0.15 tol=6.82 2024-07-28 12:39:42,399 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=29.7 pTM=0.233 ipTM=0.149 tol=7.9 2024-07-28 12:40:10,836 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=29.7 pTM=0.234 ipTM=0.152 tol=6.85 2024-07-28 12:40:39,283 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=29.8 pTM=0.234 ipTM=0.151 tol=7.1 2024-07-28 12:41:07,727 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=29.8 pTM=0.234 ipTM=0.152 tol=7.57 2024-07-28 12:41:36,134 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=29.8 pTM=0.234 ipTM=0.151 tol=6.03 2024-07-28 12:42:04,583 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=29.8 pTM=0.235 ipTM=0.154 tol=4.73 2024-07-28 12:42:33,064 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=29.7 pTM=0.234 ipTM=0.152 tol=4.55 2024-07-28 12:43:01,527 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=29.9 pTM=0.233 ipTM=0.152 tol=5.38 2024-07-28 12:43:30,039 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=30.1 pTM=0.233 ipTM=0.151 tol=4.66 2024-07-28 12:43:58,502 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=29.9 pTM=0.233 ipTM=0.152 tol=4.69 2024-07-28 12:44:27,036 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=29.9 pTM=0.233 ipTM=0.15 tol=4.13 2024-07-28 12:44:55,529 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=29.9 pTM=0.233 ipTM=0.15 tol=3.64 2024-07-28 12:45:24,048 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=30 pTM=0.232 ipTM=0.15 tol=3.54 2024-07-28 12:45:52,502 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=29.9 pTM=0.234 ipTM=0.155 tol=3.72 2024-07-28 12:46:20,962 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=29.6 pTM=0.234 ipTM=0.153 tol=5.75 2024-07-28 12:46:49,394 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=29.8 pTM=0.232 ipTM=0.154 tol=6.38 2024-07-28 12:47:17,842 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=30.1 pTM=0.233 ipTM=0.154 tol=9.55 2024-07-28 12:47:46,281 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=30 pTM=0.233 ipTM=0.152 tol=6.71 2024-07-28 12:48:14,712 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=30.2 pTM=0.232 ipTM=0.152 tol=4.31 2024-07-28 12:48:43,192 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=30.1 pTM=0.233 ipTM=0.151 tol=4.96 2024-07-28 12:49:11,689 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=29.9 pTM=0.235 ipTM=0.157 tol=5.56 2024-07-28 12:49:40,201 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=29.8 pTM=0.233 ipTM=0.151 tol=5.59 2024-07-28 12:50:08,697 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=29.9 pTM=0.235 ipTM=0.157 tol=5.27 2024-07-28 12:50:37,214 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=29.8 pTM=0.234 ipTM=0.153 tol=6.26 2024-07-28 12:51:05,713 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=29.8 pTM=0.234 ipTM=0.155 tol=5.25 2024-07-28 12:51:05,714 alphafold2_multimer_v3_model_2_seed_000 took 881.9s (30 recycles) 2024-07-28 12:51:35,049 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=24.4 pTM=0.204 ipTM=0.15 2024-07-28 12:52:03,753 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=26 pTM=0.193 ipTM=0.146 tol=18.1 2024-07-28 12:52:32,541 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=26.4 pTM=0.19 ipTM=0.145 tol=13.6 2024-07-28 12:53:01,345 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=26.4 pTM=0.194 ipTM=0.143 tol=11.2 2024-07-28 12:53:30,181 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=26.7 pTM=0.198 ipTM=0.145 tol=10.7 2024-07-28 12:53:58,980 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=27.9 pTM=0.209 ipTM=0.148 tol=11.3 2024-07-28 12:54:27,779 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=27.5 pTM=0.208 ipTM=0.148 tol=5.81 2024-07-28 12:54:56,558 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=27.7 pTM=0.209 ipTM=0.15 tol=4.24 2024-07-28 12:55:25,361 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=27.6 pTM=0.209 ipTM=0.151 tol=5.34 2024-07-28 12:55:54,141 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=27.6 pTM=0.215 ipTM=0.156 tol=3.78 2024-07-28 12:56:22,950 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=27.6 pTM=0.208 ipTM=0.147 tol=5.93 2024-07-28 12:56:51,745 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=27.5 pTM=0.213 ipTM=0.151 tol=5.21 2024-07-28 12:57:20,548 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=27.7 pTM=0.214 ipTM=0.151 tol=4.7 2024-07-28 12:57:49,371 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=27.4 pTM=0.206 ipTM=0.146 tol=7.66 2024-07-28 12:58:18,177 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=27.4 pTM=0.208 ipTM=0.15 tol=10.5 2024-07-28 12:58:46,965 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=27.5 pTM=0.21 ipTM=0.152 tol=7.02 2024-07-28 12:59:15,768 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=27.8 pTM=0.21 ipTM=0.151 tol=5.41 2024-07-28 12:59:44,551 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=27.8 pTM=0.212 ipTM=0.153 tol=11.3 2024-07-28 13:00:13,355 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=28 pTM=0.218 ipTM=0.152 tol=8 2024-07-28 13:00:42,143 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=29.8 pTM=0.235 ipTM=0.167 tol=13.6 2024-07-28 13:01:10,955 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=29.8 pTM=0.233 ipTM=0.159 tol=8.9 2024-07-28 13:01:39,748 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=29.6 pTM=0.23 ipTM=0.148 tol=4.91 2024-07-28 13:02:08,538 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=29.8 pTM=0.23 ipTM=0.144 tol=10.6 2024-07-28 13:02:37,334 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=29.8 pTM=0.232 ipTM=0.148 tol=5.48 2024-07-28 13:03:06,119 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=29.7 pTM=0.232 ipTM=0.147 tol=3.61 2024-07-28 13:03:34,907 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=29.7 pTM=0.232 ipTM=0.146 tol=8.47 2024-07-28 13:04:03,686 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=29.5 pTM=0.233 ipTM=0.146 tol=8.57 2024-07-28 13:04:32,455 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=29.7 pTM=0.23 ipTM=0.145 tol=2.92 2024-07-28 13:05:01,226 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=29.5 pTM=0.229 ipTM=0.141 tol=8.08 2024-07-28 13:05:29,999 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=29.5 pTM=0.229 ipTM=0.142 tol=4.84 2024-07-28 13:05:58,785 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=29.6 pTM=0.229 ipTM=0.144 tol=5.31 2024-07-28 13:05:58,786 alphafold2_multimer_v3_model_3_seed_000 took 892.3s (30 recycles) 2024-07-28 13:06:28,126 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=25.4 pTM=0.218 ipTM=0.148 2024-07-28 13:06:56,830 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=26 pTM=0.209 ipTM=0.154 tol=22.8 2024-07-28 13:07:25,610 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=27.2 pTM=0.212 ipTM=0.166 tol=18.2 2024-07-28 13:07:54,431 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=27.1 pTM=0.207 ipTM=0.153 tol=15.2 2024-07-28 13:08:23,223 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=27.2 pTM=0.21 ipTM=0.155 tol=11.6 2024-07-28 13:08:52,035 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=27.3 pTM=0.208 ipTM=0.155 tol=10.1 2024-07-28 13:09:20,857 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=27.3 pTM=0.209 ipTM=0.16 tol=6.21 2024-07-28 13:09:49,685 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=27.2 pTM=0.207 ipTM=0.156 tol=8.3 2024-07-28 13:10:18,480 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=27.2 pTM=0.211 ipTM=0.161 tol=5.1 2024-07-28 13:10:47,253 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=27.4 pTM=0.211 ipTM=0.159 tol=5.04 2024-07-28 13:11:16,010 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=27.4 pTM=0.213 ipTM=0.156 tol=8.48 2024-07-28 13:11:44,787 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=27.3 pTM=0.21 ipTM=0.158 tol=6.66 2024-07-28 13:12:13,573 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=28.5 pTM=0.229 ipTM=0.158 tol=15.9 2024-07-28 13:12:42,345 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=28.8 pTM=0.231 ipTM=0.157 tol=13.7 2024-07-28 13:13:11,104 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=28.8 pTM=0.233 ipTM=0.161 tol=9.02 2024-07-28 13:13:39,844 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=28.7 pTM=0.233 ipTM=0.161 tol=12 2024-07-28 13:14:08,572 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=28.9 pTM=0.234 ipTM=0.163 tol=8.11 2024-07-28 13:14:37,289 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=29.1 pTM=0.233 ipTM=0.16 tol=5.04 2024-07-28 13:15:06,016 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=29.2 pTM=0.234 ipTM=0.162 tol=9.89 2024-07-28 13:15:34,780 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=29.2 pTM=0.233 ipTM=0.16 tol=5.77 2024-07-28 13:16:03,563 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=29 pTM=0.235 ipTM=0.163 tol=8.88 2024-07-28 13:16:32,334 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=29.3 pTM=0.233 ipTM=0.159 tol=9.32 2024-07-28 13:17:01,114 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=29.2 pTM=0.232 ipTM=0.16 tol=4.26 2024-07-28 13:17:29,902 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=29.2 pTM=0.232 ipTM=0.158 tol=4.23 2024-07-28 13:17:58,679 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=29 pTM=0.233 ipTM=0.162 tol=11.4 2024-07-28 13:18:27,458 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=29 pTM=0.231 ipTM=0.157 tol=3.96 2024-07-28 13:18:56,217 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=29.1 pTM=0.235 ipTM=0.167 tol=11.2 2024-07-28 13:19:25,012 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=29 pTM=0.232 ipTM=0.159 tol=11.8 2024-07-28 13:19:53,768 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=29.1 pTM=0.234 ipTM=0.164 tol=5.5 2024-07-28 13:20:22,497 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=29 pTM=0.233 ipTM=0.163 tol=3.54 2024-07-28 13:20:51,281 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=29 pTM=0.232 ipTM=0.16 tol=11 2024-07-28 13:20:51,282 alphafold2_multimer_v3_model_4_seed_000 took 891.7s (30 recycles) 2024-07-28 13:21:20,819 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=23.8 pTM=0.193 ipTM=0.135 2024-07-28 13:21:49,701 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=25.6 pTM=0.206 ipTM=0.148 tol=26.5 2024-07-28 13:22:18,637 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=25.8 pTM=0.206 ipTM=0.153 tol=33.5 2024-07-28 13:22:47,583 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=27.3 pTM=0.217 ipTM=0.147 tol=20.4 2024-07-28 13:23:16,536 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=28.9 pTM=0.225 ipTM=0.143 tol=17.3 2024-07-28 13:23:45,437 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=29.2 pTM=0.229 ipTM=0.145 tol=14.4 2024-07-28 13:24:14,370 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=29.3 pTM=0.229 ipTM=0.141 tol=12.6 2024-07-28 13:24:43,287 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=29 pTM=0.23 ipTM=0.143 tol=8.84 2024-07-28 13:25:12,205 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=29.2 pTM=0.231 ipTM=0.146 tol=12.5 2024-07-28 13:25:41,109 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=29.1 pTM=0.232 ipTM=0.146 tol=11.7 2024-07-28 13:26:10,021 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=29.3 pTM=0.232 ipTM=0.146 tol=13.7 2024-07-28 13:26:38,919 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=29.4 pTM=0.232 ipTM=0.147 tol=16.6 2024-07-28 13:27:07,853 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=29.2 pTM=0.228 ipTM=0.143 tol=13.4 2024-07-28 13:27:36,811 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=29.6 pTM=0.231 ipTM=0.147 tol=10.6 2024-07-28 13:28:05,777 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=29.5 pTM=0.23 ipTM=0.147 tol=7.69 2024-07-28 13:28:34,740 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=29.5 pTM=0.232 ipTM=0.147 tol=9.37 2024-07-28 13:29:03,700 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=29.4 pTM=0.232 ipTM=0.146 tol=13.2 2024-07-28 13:29:32,656 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=29.4 pTM=0.231 ipTM=0.146 tol=7.93 2024-07-28 13:30:01,627 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=29.5 pTM=0.233 ipTM=0.148 tol=11.5 2024-07-28 13:30:30,580 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=29.3 pTM=0.232 ipTM=0.147 tol=9.29 2024-07-28 13:30:59,526 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=29.3 pTM=0.232 ipTM=0.149 tol=16.1 2024-07-28 13:31:28,447 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=29.4 pTM=0.232 ipTM=0.149 tol=12.3 2024-07-28 13:31:57,393 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=29.7 pTM=0.232 ipTM=0.147 tol=11.1 2024-07-28 13:32:26,339 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=29.5 pTM=0.232 ipTM=0.148 tol=7.32 2024-07-28 13:32:55,256 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=29.7 pTM=0.232 ipTM=0.149 tol=10.5 2024-07-28 13:33:24,166 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=29.7 pTM=0.232 ipTM=0.147 tol=15 2024-07-28 13:33:53,045 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=29.5 pTM=0.233 ipTM=0.149 tol=9.41 2024-07-28 13:34:21,938 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=29.7 pTM=0.233 ipTM=0.148 tol=11 2024-07-28 13:34:50,827 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=29.6 pTM=0.232 ipTM=0.146 tol=6.87 2024-07-28 13:35:19,718 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=29.7 pTM=0.232 ipTM=0.148 tol=18.3 2024-07-28 13:35:48,611 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=29.6 pTM=0.23 ipTM=0.146 tol=11.7 2024-07-28 13:35:48,612 alphafold2_multimer_v3_model_5_seed_000 took 896.6s (30 recycles) 2024-07-28 13:35:49,377 reranking models by 'multimer' metric 2024-07-28 13:35:50,663 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 13:38:11,302 Relaxation took 141.9s 2024-07-28 13:38:11,303 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=29 pTM=0.232 ipTM=0.16 2024-07-28 13:40:28,281 Relaxation took 137.0s 2024-07-28 13:40:28,282 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=29.8 pTM=0.234 ipTM=0.155 2024-07-28 13:42:56,587 Relaxation took 148.3s 2024-07-28 13:42:56,587 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=27.4 pTM=0.209 ipTM=0.152 2024-07-28 13:44:41,946 Relaxation took 105.4s 2024-07-28 13:44:41,947 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=29.6 pTM=0.23 ipTM=0.146 2024-07-28 13:46:37,557 Relaxation took 115.6s 2024-07-28 13:46:37,557 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=29.6 pTM=0.229 ipTM=0.144 2024-07-28 13:46:40,063 Done