2024-07-28 12:19:16,597 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 12:19:16,908 Running on GPU 2024-07-28 12:19:20,070 Found 6 citations for tools or databases 2024-07-28 12:19:20,070 Query 1/1: ZFP36L1_FBXO5 (length 854) 2024-07-28 12:19:20,526 Sleeping for 7s. Reason: PENDING 2024-07-28 12:19:27,936 Sleeping for 7s. Reason: RUNNING 2024-07-28 12:19:35,361 Sleeping for 6s. Reason: RUNNING 2024-07-28 12:19:41,793 Sleeping for 10s. Reason: RUNNING 2024-07-28 12:19:52,215 Sleeping for 7s. Reason: RUNNING 2024-07-28 12:20:01,153 Sleeping for 5s. Reason: PENDING 2024-07-28 12:20:06,574 Sleeping for 9s. Reason: RUNNING 2024-07-28 12:20:15,990 Sleeping for 10s. Reason: RUNNING 2024-07-28 12:20:28,728 Setting max_seq=508, max_extra_seq=2048 2024-07-28 12:23:35,187 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=32.6 pTM=0.207 ipTM=0.134 2024-07-28 12:23:51,653 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=32.7 pTM=0.206 ipTM=0.133 tol=14 2024-07-28 12:24:08,190 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=32.4 pTM=0.207 ipTM=0.132 tol=12.3 2024-07-28 12:24:24,767 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=32.8 pTM=0.203 ipTM=0.128 tol=13.3 2024-07-28 12:24:41,374 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=33.1 pTM=0.205 ipTM=0.126 tol=5.3 2024-07-28 12:24:58,026 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=32.8 pTM=0.202 ipTM=0.126 tol=5.13 2024-07-28 12:25:14,704 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=33 pTM=0.203 ipTM=0.126 tol=3.97 2024-07-28 12:25:31,387 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=32.9 pTM=0.2 ipTM=0.126 tol=3.87 2024-07-28 12:25:48,085 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=32.6 pTM=0.201 ipTM=0.128 tol=3.48 2024-07-28 12:26:04,772 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=32.8 pTM=0.202 ipTM=0.128 tol=4.48 2024-07-28 12:26:21,463 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=33 pTM=0.201 ipTM=0.129 tol=4.02 2024-07-28 12:26:38,179 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=33.1 pTM=0.203 ipTM=0.129 tol=2.96 2024-07-28 12:26:54,907 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=32.8 pTM=0.201 ipTM=0.13 tol=3.24 2024-07-28 12:27:11,644 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=32.8 pTM=0.201 ipTM=0.133 tol=3.47 2024-07-28 12:27:28,379 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=33.2 pTM=0.203 ipTM=0.131 tol=3.46 2024-07-28 12:27:45,116 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=33.3 pTM=0.203 ipTM=0.132 tol=3.39 2024-07-28 12:28:01,843 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=33.5 pTM=0.203 ipTM=0.132 tol=3.83 2024-07-28 12:28:18,562 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=33.4 pTM=0.203 ipTM=0.133 tol=3.34 2024-07-28 12:28:35,324 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=33.3 pTM=0.201 ipTM=0.132 tol=3.06 2024-07-28 12:28:52,080 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=33.3 pTM=0.203 ipTM=0.131 tol=2.97 2024-07-28 12:29:08,818 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=33.2 pTM=0.203 ipTM=0.131 tol=3 2024-07-28 12:29:25,554 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=33.2 pTM=0.202 ipTM=0.131 tol=2.77 2024-07-28 12:29:42,267 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=33.2 pTM=0.204 ipTM=0.134 tol=2.51 2024-07-28 12:29:58,995 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=33.3 pTM=0.204 ipTM=0.133 tol=2.49 2024-07-28 12:30:15,712 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=33.1 pTM=0.202 ipTM=0.132 tol=2.83 2024-07-28 12:30:32,454 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=33 pTM=0.202 ipTM=0.132 tol=2.04 2024-07-28 12:30:49,199 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=32.8 pTM=0.203 ipTM=0.13 tol=3.22 2024-07-28 12:31:05,915 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=33.1 pTM=0.204 ipTM=0.13 tol=2.55 2024-07-28 12:31:22,648 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=32.9 pTM=0.202 ipTM=0.132 tol=2.19 2024-07-28 12:31:39,370 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=33 pTM=0.204 ipTM=0.133 tol=2.26 2024-07-28 12:31:56,077 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=33.1 pTM=0.203 ipTM=0.132 tol=2.54 2024-07-28 12:31:56,078 alphafold2_multimer_v3_model_1_seed_000 took 682.4s (30 recycles) 2024-07-28 12:32:13,176 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32.7 pTM=0.214 ipTM=0.136 2024-07-28 12:32:29,853 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=33.4 pTM=0.218 ipTM=0.141 tol=13.8 2024-07-28 12:32:46,556 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=33.3 pTM=0.219 ipTM=0.135 tol=12.2 2024-07-28 12:33:03,258 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=33.9 pTM=0.222 ipTM=0.138 tol=6.97 2024-07-28 12:33:19,989 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=34.2 pTM=0.221 ipTM=0.136 tol=6.5 2024-07-28 12:33:36,724 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=34.3 pTM=0.219 ipTM=0.134 tol=9.44 2024-07-28 12:33:53,453 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=34.6 pTM=0.22 ipTM=0.135 tol=5.72 2024-07-28 12:34:10,170 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=34.5 pTM=0.218 ipTM=0.133 tol=4.62 2024-07-28 12:34:26,853 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=34.2 pTM=0.217 ipTM=0.134 tol=5.27 2024-07-28 12:34:43,548 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=34.3 pTM=0.219 ipTM=0.136 tol=3.64 2024-07-28 12:35:00,288 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=34.3 pTM=0.217 ipTM=0.134 tol=3.72 2024-07-28 12:35:17,004 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=34.4 pTM=0.218 ipTM=0.134 tol=4.21 2024-07-28 12:35:33,738 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=34.1 pTM=0.217 ipTM=0.132 tol=7.82 2024-07-28 12:35:50,477 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=34.3 pTM=0.217 ipTM=0.135 tol=5.14 2024-07-28 12:36:07,197 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=34.4 pTM=0.218 ipTM=0.133 tol=4.51 2024-07-28 12:36:23,925 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=34.4 pTM=0.216 ipTM=0.13 tol=3.58 2024-07-28 12:36:40,664 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=34.6 pTM=0.216 ipTM=0.131 tol=3.99 2024-07-28 12:36:57,385 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=34.5 pTM=0.217 ipTM=0.131 tol=3.33 2024-07-28 12:37:14,117 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=34.3 pTM=0.217 ipTM=0.132 tol=3.88 2024-07-28 12:37:30,838 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=34.2 pTM=0.217 ipTM=0.131 tol=4.02 2024-07-28 12:37:47,576 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=34.3 pTM=0.217 ipTM=0.13 tol=3.98 2024-07-28 12:38:04,322 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=34.2 pTM=0.217 ipTM=0.132 tol=3.3 2024-07-28 12:38:21,073 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=34.5 pTM=0.218 ipTM=0.132 tol=3.47 2024-07-28 12:38:37,853 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=34.4 pTM=0.218 ipTM=0.133 tol=3.31 2024-07-28 12:38:54,626 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=34.5 pTM=0.216 ipTM=0.13 tol=5.66 2024-07-28 12:39:11,398 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=34.4 pTM=0.217 ipTM=0.132 tol=4.12 2024-07-28 12:39:28,172 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=34.2 pTM=0.217 ipTM=0.133 tol=3.56 2024-07-28 12:39:44,947 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=34.4 pTM=0.216 ipTM=0.13 tol=6.61 2024-07-28 12:40:01,729 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=34.4 pTM=0.216 ipTM=0.133 tol=4.54 2024-07-28 12:40:18,508 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=34.3 pTM=0.218 ipTM=0.135 tol=4.67 2024-07-28 12:40:35,250 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=34.3 pTM=0.219 ipTM=0.136 tol=3.75 2024-07-28 12:40:35,251 alphafold2_multimer_v3_model_2_seed_000 took 518.7s (30 recycles) 2024-07-28 12:40:52,520 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=32.9 pTM=0.205 ipTM=0.133 2024-07-28 12:41:09,370 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=32.4 pTM=0.216 ipTM=0.141 tol=17 2024-07-28 12:41:26,224 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=33.3 pTM=0.22 ipTM=0.143 tol=13 2024-07-28 12:41:43,110 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=33.3 pTM=0.22 ipTM=0.141 tol=9.78 2024-07-28 12:41:59,959 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=33.7 pTM=0.222 ipTM=0.141 tol=6.88 2024-07-28 12:42:16,784 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=33.8 pTM=0.224 ipTM=0.145 tol=10.6 2024-07-28 12:42:33,581 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=33.8 pTM=0.223 ipTM=0.144 tol=9.34 2024-07-28 12:42:50,408 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=33.7 pTM=0.222 ipTM=0.147 tol=5.42 2024-07-28 12:43:07,240 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=33.6 pTM=0.222 ipTM=0.14 tol=5.27 2024-07-28 12:43:24,071 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=34.1 pTM=0.228 ipTM=0.153 tol=4.07 2024-07-28 12:43:40,893 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=33.7 pTM=0.224 ipTM=0.143 tol=4.16 2024-07-28 12:43:57,708 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=34.1 pTM=0.225 ipTM=0.146 tol=7.8 2024-07-28 12:44:14,514 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=33.8 pTM=0.225 ipTM=0.14 tol=5.43 2024-07-28 12:44:31,324 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=34.4 pTM=0.224 ipTM=0.149 tol=5.72 2024-07-28 12:44:48,168 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=33.9 pTM=0.225 ipTM=0.139 tol=4.27 2024-07-28 12:45:05,034 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=34.2 pTM=0.226 ipTM=0.144 tol=13 2024-07-28 12:45:21,879 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=33.9 pTM=0.225 ipTM=0.14 tol=10.6 2024-07-28 12:45:38,723 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=34.2 pTM=0.226 ipTM=0.144 tol=5.74 2024-07-28 12:45:55,547 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=33.8 pTM=0.224 ipTM=0.141 tol=3.8 2024-07-28 12:46:12,421 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=33.8 pTM=0.226 ipTM=0.145 tol=6.45 2024-07-28 12:46:29,255 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=34.1 pTM=0.229 ipTM=0.146 tol=3.93 2024-07-28 12:46:46,091 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=34.4 pTM=0.232 ipTM=0.159 tol=3.62 2024-07-28 12:47:02,922 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=34.4 pTM=0.23 ipTM=0.147 tol=4.7 2024-07-28 12:47:19,725 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=34.2 pTM=0.227 ipTM=0.147 tol=5.87 2024-07-28 12:47:36,568 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=34.2 pTM=0.224 ipTM=0.141 tol=3.9 2024-07-28 12:47:53,418 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=34 pTM=0.226 ipTM=0.144 tol=3.88 2024-07-28 12:48:10,243 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=33.7 pTM=0.225 ipTM=0.141 tol=3.93 2024-07-28 12:48:27,061 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=34.3 pTM=0.228 ipTM=0.145 tol=4.79 2024-07-28 12:48:43,863 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=33.9 pTM=0.225 ipTM=0.14 tol=3.5 2024-07-28 12:49:00,662 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=34 pTM=0.229 ipTM=0.149 tol=4.05 2024-07-28 12:49:17,480 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=34 pTM=0.227 ipTM=0.146 tol=2.95 2024-07-28 12:49:17,481 alphafold2_multimer_v3_model_3_seed_000 took 521.8s (30 recycles) 2024-07-28 12:49:34,716 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=33.1 pTM=0.23 ipTM=0.191 2024-07-28 12:49:51,518 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=33.9 pTM=0.224 ipTM=0.143 tol=12.4 2024-07-28 12:50:08,314 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=33.6 pTM=0.222 ipTM=0.137 tol=11.4 2024-07-28 12:50:25,124 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=33.8 pTM=0.219 ipTM=0.132 tol=10.2 2024-07-28 12:50:41,925 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=33.6 pTM=0.219 ipTM=0.131 tol=10.7 2024-07-28 12:50:58,720 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=33.6 pTM=0.218 ipTM=0.132 tol=11.8 2024-07-28 12:51:15,513 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=33.6 pTM=0.219 ipTM=0.134 tol=6.18 2024-07-28 12:51:32,336 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=33.3 pTM=0.217 ipTM=0.13 tol=4.91 2024-07-28 12:51:49,164 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=33.1 pTM=0.216 ipTM=0.134 tol=6.21 2024-07-28 12:52:05,991 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=33.2 pTM=0.216 ipTM=0.134 tol=5.31 2024-07-28 12:52:22,819 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=33.4 pTM=0.214 ipTM=0.135 tol=5.85 2024-07-28 12:52:39,625 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=33.2 pTM=0.215 ipTM=0.135 tol=11.1 2024-07-28 12:52:56,442 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=33.2 pTM=0.213 ipTM=0.135 tol=12.2 2024-07-28 12:53:13,237 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=33.2 pTM=0.214 ipTM=0.137 tol=6.12 2024-07-28 12:53:30,025 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=33.2 pTM=0.216 ipTM=0.135 tol=11.6 2024-07-28 12:53:46,823 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=33.1 pTM=0.216 ipTM=0.136 tol=11.1 2024-07-28 12:54:03,641 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=33.3 pTM=0.216 ipTM=0.135 tol=6.73 2024-07-28 12:54:20,420 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=33.3 pTM=0.219 ipTM=0.138 tol=3.8 2024-07-28 12:54:37,189 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=33.2 pTM=0.219 ipTM=0.138 tol=4.77 2024-07-28 12:54:53,952 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=33.3 pTM=0.219 ipTM=0.137 tol=3.81 2024-07-28 12:55:10,720 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=33.4 pTM=0.221 ipTM=0.136 tol=3.55 2024-07-28 12:55:27,522 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=33.5 pTM=0.218 ipTM=0.133 tol=3.42 2024-07-28 12:55:44,314 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=33.5 pTM=0.221 ipTM=0.136 tol=2.77 2024-07-28 12:56:01,093 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=33.5 pTM=0.219 ipTM=0.136 tol=9.64 2024-07-28 12:56:17,854 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=33.3 pTM=0.217 ipTM=0.135 tol=9.5 2024-07-28 12:56:34,640 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=33.3 pTM=0.218 ipTM=0.137 tol=3.74 2024-07-28 12:56:51,447 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=33.2 pTM=0.217 ipTM=0.135 tol=10.2 2024-07-28 12:57:08,251 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=33.4 pTM=0.215 ipTM=0.135 tol=9.25 2024-07-28 12:57:25,070 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=33.2 pTM=0.216 ipTM=0.135 tol=4.13 2024-07-28 12:57:41,853 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=33.3 pTM=0.22 ipTM=0.137 tol=4.1 2024-07-28 12:57:58,639 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=33.3 pTM=0.218 ipTM=0.136 tol=3.9 2024-07-28 12:57:58,640 alphafold2_multimer_v3_model_4_seed_000 took 520.7s (30 recycles) 2024-07-28 12:58:15,957 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=33.1 pTM=0.207 ipTM=0.128 2024-07-28 12:58:32,802 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=33.8 pTM=0.221 ipTM=0.141 tol=15.1 2024-07-28 12:58:49,701 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=33.7 pTM=0.221 ipTM=0.143 tol=11.6 2024-07-28 12:59:06,616 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=34.2 pTM=0.22 ipTM=0.145 tol=11.5 2024-07-28 12:59:23,525 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=34.4 pTM=0.219 ipTM=0.14 tol=6.35 2024-07-28 12:59:40,424 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=34.1 pTM=0.22 ipTM=0.142 tol=8.34 2024-07-28 12:59:57,320 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=33.9 pTM=0.221 ipTM=0.142 tol=7.8 2024-07-28 13:00:14,251 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=34 pTM=0.22 ipTM=0.142 tol=7.2 2024-07-28 13:00:31,195 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=33.5 pTM=0.219 ipTM=0.141 tol=5.05 2024-07-28 13:00:48,127 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=34.2 pTM=0.224 ipTM=0.146 tol=6.19 2024-07-28 13:01:05,078 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=33.9 pTM=0.221 ipTM=0.141 tol=6.71 2024-07-28 13:01:22,024 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=34.3 pTM=0.223 ipTM=0.144 tol=9.35 2024-07-28 13:01:38,962 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=34 pTM=0.222 ipTM=0.14 tol=9.77 2024-07-28 13:01:55,916 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=34.1 pTM=0.222 ipTM=0.144 tol=9.82 2024-07-28 13:02:12,836 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=34 pTM=0.222 ipTM=0.137 tol=7.01 2024-07-28 13:02:29,759 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=34.1 pTM=0.221 ipTM=0.14 tol=7.09 2024-07-28 13:02:46,661 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=33.9 pTM=0.222 ipTM=0.141 tol=10.6 2024-07-28 13:03:03,566 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=34 pTM=0.222 ipTM=0.141 tol=9.95 2024-07-28 13:03:20,464 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=33.8 pTM=0.223 ipTM=0.139 tol=6.98 2024-07-28 13:03:37,364 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=33.8 pTM=0.222 ipTM=0.14 tol=8.63 2024-07-28 13:03:54,260 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=33.9 pTM=0.223 ipTM=0.141 tol=8.34 2024-07-28 13:04:11,156 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=34 pTM=0.222 ipTM=0.146 tol=8.98 2024-07-28 13:04:28,072 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=34.2 pTM=0.223 ipTM=0.145 tol=6.52 2024-07-28 13:04:45,011 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=34.2 pTM=0.22 ipTM=0.144 tol=6.06 2024-07-28 13:05:01,949 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=33.8 pTM=0.22 ipTM=0.141 tol=6.75 2024-07-28 13:05:18,886 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=34 pTM=0.219 ipTM=0.141 tol=6.11 2024-07-28 13:05:35,817 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=33.7 pTM=0.221 ipTM=0.139 tol=11.3 2024-07-28 13:05:52,765 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=34.3 pTM=0.223 ipTM=0.139 tol=12.1 2024-07-28 13:06:09,716 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=33.9 pTM=0.222 ipTM=0.137 tol=8.91 2024-07-28 13:06:26,631 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=34.2 pTM=0.223 ipTM=0.145 tol=8.56 2024-07-28 13:06:43,552 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=33.9 pTM=0.222 ipTM=0.14 tol=4.98 2024-07-28 13:06:43,552 alphafold2_multimer_v3_model_5_seed_000 took 524.5s (30 recycles) 2024-07-28 13:06:44,014 reranking models by 'multimer' metric 2024-07-28 13:06:47,234 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 13:07:58,816 Relaxation took 74.8s 2024-07-28 13:07:58,816 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=34 pTM=0.227 ipTM=0.146 2024-07-28 13:09:42,654 Relaxation took 103.8s 2024-07-28 13:09:42,655 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=33.9 pTM=0.222 ipTM=0.14 2024-07-28 13:10:47,477 Relaxation took 64.8s 2024-07-28 13:10:47,478 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=34.3 pTM=0.219 ipTM=0.136 2024-07-28 13:11:50,813 Relaxation took 63.3s 2024-07-28 13:11:50,813 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=33.3 pTM=0.218 ipTM=0.136 2024-07-28 13:12:58,409 Relaxation took 67.6s 2024-07-28 13:12:58,409 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=33.1 pTM=0.203 ipTM=0.132 2024-07-28 13:13:00,002 Done