2024-07-28 12:46:17,362 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 12:46:17,689 Running on GPU
2024-07-28 12:46:21,209 Found 6 citations for tools or databases
2024-07-28 12:46:21,209 Query 1/1: ZFP36L1_RAB40AL (length 685)
2024-07-28 12:46:21,665 Sleeping for 7s. Reason: PENDING
2024-07-28 12:46:29,090 Sleeping for 10s. Reason: RUNNING
2024-07-28 12:46:39,515 Sleeping for 7s. Reason: RUNNING
2024-07-28 12:46:46,945 Sleeping for 10s. Reason: RUNNING
2024-07-28 12:46:57,378 Sleeping for 10s. Reason: RUNNING
2024-07-28 12:47:07,839 Sleeping for 7s. Reason: RUNNING
2024-07-28 12:47:15,262 Sleeping for 5s. Reason: RUNNING
2024-07-28 12:47:20,692 Sleeping for 7s. Reason: RUNNING
2024-07-28 12:47:28,106 Sleeping for 10s. Reason: RUNNING
2024-07-28 12:47:40,287 Sleeping for 6s. Reason: PENDING
2024-07-28 12:47:46,719 Sleeping for 8s. Reason: RUNNING
2024-07-28 12:47:55,154 Sleeping for 8s. Reason: RUNNING
2024-07-28 12:48:03,563 Sleeping for 8s. Reason: RUNNING
2024-07-28 12:48:11,968 Sleeping for 6s. Reason: RUNNING
2024-07-28 12:48:18,389 Sleeping for 7s. Reason: RUNNING
2024-07-28 12:48:28,545 Setting max_seq=508, max_extra_seq=2048
2024-07-28 12:51:52,159 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=40.8 pTM=0.324 ipTM=0.195
2024-07-28 12:52:01,453 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=39.3 pTM=0.317 ipTM=0.171 tol=13.5
2024-07-28 12:52:10,779 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=39.9 pTM=0.317 ipTM=0.158 tol=7.86
2024-07-28 12:52:20,130 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=39.8 pTM=0.316 ipTM=0.158 tol=9.05
2024-07-28 12:52:29,504 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=39.5 pTM=0.324 ipTM=0.168 tol=12.2
2024-07-28 12:52:38,890 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=38.9 pTM=0.322 ipTM=0.172 tol=7.95
2024-07-28 12:52:48,279 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=39.4 pTM=0.326 ipTM=0.182 tol=5.5
2024-07-28 12:52:57,681 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=39.2 pTM=0.324 ipTM=0.173 tol=9.01
2024-07-28 12:53:07,090 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=39.5 pTM=0.327 ipTM=0.181 tol=7.5
2024-07-28 12:53:16,506 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=39.5 pTM=0.325 ipTM=0.17 tol=5.08
2024-07-28 12:53:25,940 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=39.6 pTM=0.33 ipTM=0.194 tol=8.73
2024-07-28 12:53:35,383 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=39.1 pTM=0.323 ipTM=0.172 tol=6.02
2024-07-28 12:53:44,811 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=39.4 pTM=0.325 ipTM=0.182 tol=4.56
2024-07-28 12:53:54,239 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=38.9 pTM=0.326 ipTM=0.183 tol=4.84
2024-07-28 12:54:03,667 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=39.2 pTM=0.327 ipTM=0.187 tol=3.47
2024-07-28 12:54:13,094 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=39.1 pTM=0.328 ipTM=0.184 tol=5.45
2024-07-28 12:54:22,533 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=39 pTM=0.331 ipTM=0.195 tol=4.51
2024-07-28 12:54:31,968 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=38.9 pTM=0.331 ipTM=0.192 tol=4.7
2024-07-28 12:54:41,412 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=38.9 pTM=0.331 ipTM=0.191 tol=2.76
2024-07-28 12:54:50,854 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=38.8 pTM=0.327 ipTM=0.18 tol=2.06
2024-07-28 12:55:00,312 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39.1 pTM=0.328 ipTM=0.181 tol=2.73
2024-07-28 12:55:09,756 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=39 pTM=0.33 ipTM=0.176 tol=5.01
2024-07-28 12:55:19,210 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=38.9 pTM=0.327 ipTM=0.182 tol=2.87
2024-07-28 12:55:28,677 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39 pTM=0.324 ipTM=0.175 tol=3.02
2024-07-28 12:55:38,134 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39 pTM=0.324 ipTM=0.176 tol=3.98
2024-07-28 12:55:47,584 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=39.4 pTM=0.328 ipTM=0.179 tol=4.72
2024-07-28 12:55:57,039 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=39.2 pTM=0.329 ipTM=0.19 tol=4.15
2024-07-28 12:56:06,475 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=39.1 pTM=0.321 ipTM=0.173 tol=6.19
2024-07-28 12:56:15,925 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=39.2 pTM=0.327 ipTM=0.194 tol=5.98
2024-07-28 12:56:25,379 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=39.1 pTM=0.323 ipTM=0.178 tol=3.77
2024-07-28 12:56:34,823 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=39.2 pTM=0.327 ipTM=0.192 tol=5.27
2024-07-28 12:56:34,823 alphafold2_multimer_v3_model_1_seed_000 took 481.4s (30 recycles)
2024-07-28 12:56:44,557 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.4 pTM=0.362 ipTM=0.166
2024-07-28 12:56:54,001 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=40.2 pTM=0.336 ipTM=0.185 tol=17.3
2024-07-28 12:57:03,429 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=40.9 pTM=0.356 ipTM=0.179 tol=14.2
2024-07-28 12:57:12,874 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=40.9 pTM=0.357 ipTM=0.167 tol=8.78
2024-07-28 12:57:22,325 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=42.6 pTM=0.389 ipTM=0.205 tol=10
2024-07-28 12:57:31,792 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.2 pTM=0.396 ipTM=0.201 tol=6.18
2024-07-28 12:57:41,231 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.2 pTM=0.389 ipTM=0.2 tol=5.97
2024-07-28 12:57:50,686 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=42.3 pTM=0.368 ipTM=0.176 tol=4.68
2024-07-28 12:58:00,115 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=42.4 pTM=0.368 ipTM=0.188 tol=5.05
2024-07-28 12:58:09,566 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=42.4 pTM=0.365 ipTM=0.178 tol=2.36
2024-07-28 12:58:19,002 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=42.5 pTM=0.369 ipTM=0.195 tol=2.68
2024-07-28 12:58:28,415 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=42.2 pTM=0.366 ipTM=0.176 tol=4.23
2024-07-28 12:58:37,847 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=42.3 pTM=0.367 ipTM=0.195 tol=3.86
2024-07-28 12:58:47,276 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.6 pTM=0.362 ipTM=0.174 tol=5.05
2024-07-28 12:58:56,711 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.8 pTM=0.364 ipTM=0.185 tol=6.07
2024-07-28 12:59:06,143 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.7 pTM=0.365 ipTM=0.173 tol=4.69
2024-07-28 12:59:15,576 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=42.2 pTM=0.37 ipTM=0.202 tol=2.01
2024-07-28 12:59:25,003 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=42.2 pTM=0.364 ipTM=0.177 tol=3.08
2024-07-28 12:59:34,434 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=42.2 pTM=0.366 ipTM=0.195 tol=4.94
2024-07-28 12:59:43,867 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.8 pTM=0.365 ipTM=0.177 tol=7.88
2024-07-28 12:59:53,309 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.8 pTM=0.361 ipTM=0.19 tol=5.55
2024-07-28 13:00:02,752 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=42 pTM=0.359 ipTM=0.174 tol=5.7
2024-07-28 13:00:12,186 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=41.7 pTM=0.36 ipTM=0.191 tol=5.86
2024-07-28 13:00:21,635 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.6 pTM=0.353 ipTM=0.165 tol=3.68
2024-07-28 13:00:31,075 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42 pTM=0.362 ipTM=0.19 tol=2.79
2024-07-28 13:00:40,535 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.4 pTM=0.349 ipTM=0.16 tol=2.74
2024-07-28 13:00:49,978 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.7 pTM=0.354 ipTM=0.189 tol=4.38
2024-07-28 13:00:59,426 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=41.3 pTM=0.353 ipTM=0.16 tol=4.11
2024-07-28 13:01:08,865 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=41.2 pTM=0.355 ipTM=0.192 tol=4.94
2024-07-28 13:01:18,313 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.3 pTM=0.349 ipTM=0.159 tol=3.33
2024-07-28 13:01:27,769 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41.4 pTM=0.354 ipTM=0.185 tol=3.18
2024-07-28 13:01:27,769 alphafold2_multimer_v3_model_2_seed_000 took 292.6s (30 recycles)
2024-07-28 13:01:37,596 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=41.8 pTM=0.328 ipTM=0.18
2024-07-28 13:01:47,117 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=41.2 pTM=0.344 ipTM=0.204 tol=22.4
2024-07-28 13:01:56,642 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=41.2 pTM=0.336 ipTM=0.143 tol=14.1
2024-07-28 13:02:06,164 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=42.4 pTM=0.347 ipTM=0.149 tol=10.5
2024-07-28 13:02:15,683 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=43.2 pTM=0.369 ipTM=0.18 tol=7.68
2024-07-28 13:02:25,198 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=43.8 pTM=0.376 ipTM=0.22 tol=6.17
2024-07-28 13:02:34,722 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=43.8 pTM=0.38 ipTM=0.199 tol=6.27
2024-07-28 13:02:44,242 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=44.4 pTM=0.379 ipTM=0.207 tol=3.49
2024-07-28 13:02:53,754 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=44.4 pTM=0.391 ipTM=0.222 tol=4.01
2024-07-28 13:03:03,246 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45 pTM=0.391 ipTM=0.236 tol=4.25
2024-07-28 13:03:12,758 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.2 pTM=0.407 ipTM=0.331 tol=4.21
2024-07-28 13:03:22,273 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45 pTM=0.396 ipTM=0.263 tol=5.92
2024-07-28 13:03:31,782 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=44.8 pTM=0.402 ipTM=0.317 tol=3.06
2024-07-28 13:03:41,287 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=44.9 pTM=0.398 ipTM=0.263 tol=3.5
2024-07-28 13:03:50,799 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=44.6 pTM=0.4 ipTM=0.292 tol=3.62
2024-07-28 13:04:00,307 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.9 pTM=0.402 ipTM=0.262 tol=4.41
2024-07-28 13:04:09,818 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=44 pTM=0.395 ipTM=0.306 tol=8.84
2024-07-28 13:04:19,334 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=44.6 pTM=0.397 ipTM=0.241 tol=7.5
2024-07-28 13:04:28,848 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.9 pTM=0.401 ipTM=0.272 tol=5.4
2024-07-28 13:04:38,378 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45 pTM=0.399 ipTM=0.239 tol=3.83
2024-07-28 13:04:47,868 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.8 pTM=0.401 ipTM=0.276 tol=5.45
2024-07-28 13:04:57,390 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.6 pTM=0.397 ipTM=0.227 tol=5.68
2024-07-28 13:05:06,899 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44.7 pTM=0.403 ipTM=0.275 tol=5.71
2024-07-28 13:05:16,412 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45 pTM=0.399 ipTM=0.253 tol=3.74
2024-07-28 13:05:25,920 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44.9 pTM=0.403 ipTM=0.31 tol=3.12
2024-07-28 13:05:35,450 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.9 pTM=0.399 ipTM=0.243 tol=3.57
2024-07-28 13:05:44,969 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.7 pTM=0.403 ipTM=0.29 tol=4.12
2024-07-28 13:05:54,482 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.8 pTM=0.404 ipTM=0.28 tol=5.71
2024-07-28 13:06:03,991 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=44.2 pTM=0.395 ipTM=0.246 tol=5.45
2024-07-28 13:06:13,510 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44.9 pTM=0.402 ipTM=0.263 tol=3.14
2024-07-28 13:06:23,034 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.1 pTM=0.391 ipTM=0.259 tol=9.38
2024-07-28 13:06:23,035 alphafold2_multimer_v3_model_3_seed_000 took 295.0s (30 recycles)
2024-07-28 13:06:32,826 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=38.4 pTM=0.319 ipTM=0.168
2024-07-28 13:06:42,330 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=38.3 pTM=0.327 ipTM=0.219 tol=15.5
2024-07-28 13:06:51,832 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=38.7 pTM=0.318 ipTM=0.159 tol=13.9
2024-07-28 13:07:01,352 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=38.7 pTM=0.318 ipTM=0.174 tol=14.7
2024-07-28 13:07:10,870 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=39.2 pTM=0.323 ipTM=0.16 tol=8.84
2024-07-28 13:07:20,389 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=39.2 pTM=0.32 ipTM=0.169 tol=10.7
2024-07-28 13:07:29,896 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=39 pTM=0.32 ipTM=0.158 tol=8.33
2024-07-28 13:07:39,411 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=39.2 pTM=0.323 ipTM=0.168 tol=5.26
2024-07-28 13:07:48,940 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=39.1 pTM=0.319 ipTM=0.16 tol=5.98
2024-07-28 13:07:58,454 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=39.3 pTM=0.323 ipTM=0.186 tol=7.96
2024-07-28 13:08:07,981 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=39.2 pTM=0.322 ipTM=0.178 tol=7.4
2024-07-28 13:08:17,479 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=39.3 pTM=0.322 ipTM=0.18 tol=6.75
2024-07-28 13:08:27,012 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=39.2 pTM=0.32 ipTM=0.173 tol=6.62
2024-07-28 13:08:36,534 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=39.3 pTM=0.326 ipTM=0.191 tol=4.83
2024-07-28 13:08:46,059 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=39.2 pTM=0.321 ipTM=0.18 tol=7.69
2024-07-28 13:08:55,582 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=38.9 pTM=0.323 ipTM=0.182 tol=7.32
2024-07-28 13:09:05,115 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=39.2 pTM=0.32 ipTM=0.168 tol=5.28
2024-07-28 13:09:14,639 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=39.3 pTM=0.326 ipTM=0.19 tol=4.25
2024-07-28 13:09:24,169 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=39.3 pTM=0.32 ipTM=0.17 tol=3.5
2024-07-28 13:09:33,699 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=39.5 pTM=0.325 ipTM=0.194 tol=4.71
2024-07-28 13:09:43,212 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=39.3 pTM=0.32 ipTM=0.166 tol=6.2
2024-07-28 13:09:52,724 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=39.2 pTM=0.324 ipTM=0.189 tol=6.19
2024-07-28 13:10:02,234 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=38.5 pTM=0.319 ipTM=0.162 tol=12.7
2024-07-28 13:10:11,734 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=39.3 pTM=0.325 ipTM=0.194 tol=9.98
2024-07-28 13:10:21,270 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=39.5 pTM=0.319 ipTM=0.158 tol=5.2
2024-07-28 13:10:30,778 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=39.5 pTM=0.326 ipTM=0.191 tol=4.07
2024-07-28 13:10:40,305 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=39.4 pTM=0.322 ipTM=0.176 tol=5.7
2024-07-28 13:10:49,826 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=39.4 pTM=0.322 ipTM=0.176 tol=4.95
2024-07-28 13:10:59,344 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=39.2 pTM=0.32 ipTM=0.168 tol=4.81
2024-07-28 13:11:08,868 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=39.4 pTM=0.324 ipTM=0.188 tol=4.89
2024-07-28 13:11:18,385 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=38.9 pTM=0.319 ipTM=0.166 tol=4.52
2024-07-28 13:11:18,386 alphafold2_multimer_v3_model_4_seed_000 took 295.0s (30 recycles)
2024-07-28 13:11:28,215 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=41 pTM=0.345 ipTM=0.172
2024-07-28 13:11:37,760 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40.6 pTM=0.329 ipTM=0.194 tol=15.1
2024-07-28 13:11:47,319 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.6 pTM=0.324 ipTM=0.156 tol=10.9
2024-07-28 13:11:56,862 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=40.7 pTM=0.325 ipTM=0.157 tol=7.72
2024-07-28 13:12:06,392 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.6 pTM=0.349 ipTM=0.173 tol=8.12
2024-07-28 13:12:15,935 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=41.6 pTM=0.345 ipTM=0.176 tol=9.73
2024-07-28 13:12:25,481 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41.5 pTM=0.342 ipTM=0.162 tol=9.45
2024-07-28 13:12:35,025 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.5 pTM=0.338 ipTM=0.179 tol=10.3
2024-07-28 13:12:44,581 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.3 pTM=0.337 ipTM=0.169 tol=9.34
2024-07-28 13:12:54,125 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41.6 pTM=0.346 ipTM=0.186 tol=9.18
2024-07-28 13:13:03,682 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.6 pTM=0.351 ipTM=0.199 tol=4.58
2024-07-28 13:13:13,224 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=42.3 pTM=0.362 ipTM=0.204 tol=6.42
2024-07-28 13:13:22,750 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=42 pTM=0.352 ipTM=0.196 tol=4.14
2024-07-28 13:13:32,307 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.8 pTM=0.353 ipTM=0.2 tol=5.54
2024-07-28 13:13:41,848 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.6 pTM=0.348 ipTM=0.206 tol=8.16
2024-07-28 13:13:51,407 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.7 pTM=0.352 ipTM=0.199 tol=9.09
2024-07-28 13:14:00,976 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=42.3 pTM=0.362 ipTM=0.215 tol=5.41
2024-07-28 13:14:10,532 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.7 pTM=0.367 ipTM=0.203 tol=6.29
2024-07-28 13:14:20,074 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.4 pTM=0.36 ipTM=0.205 tol=7.32
2024-07-28 13:14:29,656 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.8 pTM=0.369 ipTM=0.206 tol=10.6
2024-07-28 13:14:39,210 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=42.6 pTM=0.363 ipTM=0.212 tol=7.96
2024-07-28 13:14:48,760 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.5 pTM=0.366 ipTM=0.211 tol=10.8
2024-07-28 13:14:58,302 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.8 pTM=0.365 ipTM=0.211 tol=10.1
2024-07-28 13:15:07,857 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.9 pTM=0.369 ipTM=0.215 tol=7.6
2024-07-28 13:15:17,411 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=43 pTM=0.367 ipTM=0.218 tol=10.2
2024-07-28 13:15:26,956 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=43.2 pTM=0.37 ipTM=0.369 tol=11.4
2024-07-28 13:15:36,501 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=44.1 pTM=0.378 ipTM=0.45 tol=8.27
2024-07-28 13:15:46,043 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=43.7 pTM=0.378 ipTM=0.462 tol=6.54
2024-07-28 13:15:55,586 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=43.4 pTM=0.373 ipTM=0.445 tol=4.61
2024-07-28 13:16:05,123 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43 pTM=0.37 ipTM=0.414 tol=3.6
2024-07-28 13:16:14,666 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=43.2 pTM=0.373 ipTM=0.432 tol=8.98
2024-07-28 13:16:14,667 alphafold2_multimer_v3_model_5_seed_000 took 296.0s (30 recycles)
2024-07-28 13:16:14,966 reranking models by 'multimer' metric
2024-07-28 13:16:15,778 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 13:17:06,780 Relaxation took 51.8s
2024-07-28 13:17:06,780 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=43.2 pTM=0.373 ipTM=0.432
2024-07-28 13:18:15,574 Relaxation took 68.8s
2024-07-28 13:18:15,574 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.1 pTM=0.391 ipTM=0.259
2024-07-28 13:19:09,995 Relaxation took 54.4s
2024-07-28 13:19:09,995 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41.4 pTM=0.354 ipTM=0.185
2024-07-28 13:19:48,320 Relaxation took 38.3s
2024-07-28 13:19:48,320 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=39.2 pTM=0.327 ipTM=0.192
2024-07-28 13:20:40,744 Relaxation took 52.4s
2024-07-28 13:20:40,744 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=38.9 pTM=0.319 ipTM=0.166
2024-07-28 13:20:41,963 Done