2024-07-28 12:50:32,771 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 12:50:33,080 Running on GPU 2024-07-28 12:50:36,642 Found 6 citations for tools or databases 2024-07-28 12:50:36,642 Query 1/1: ZFP36L1_SPSB2 (length 670) 2024-07-28 12:50:37,137 Sleeping for 5s. Reason: PENDING 2024-07-28 12:50:42,555 Sleeping for 5s. Reason: RUNNING 2024-07-28 12:50:47,977 Sleeping for 9s. Reason: RUNNING 2024-07-28 12:50:57,410 Sleeping for 5s. Reason: RUNNING 2024-07-28 12:51:02,824 Sleeping for 9s. Reason: RUNNING 2024-07-28 12:51:12,266 Sleeping for 8s. Reason: RUNNING 2024-07-28 12:51:20,689 Sleeping for 7s. Reason: RUNNING 2024-07-28 12:51:29,635 Sleeping for 6s. Reason: PENDING 2024-07-28 12:51:36,073 Sleeping for 5s. Reason: RUNNING 2024-07-28 12:51:41,484 Sleeping for 9s. Reason: RUNNING 2024-07-28 12:51:50,908 Sleeping for 6s. Reason: RUNNING 2024-07-28 12:51:57,325 Sleeping for 8s. Reason: RUNNING 2024-07-28 12:52:05,751 Sleeping for 9s. Reason: RUNNING 2024-07-28 12:52:17,315 Setting max_seq=508, max_extra_seq=2048 2024-07-28 12:55:20,506 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46 pTM=0.392 ipTM=0.21 2024-07-28 12:55:29,752 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.5 pTM=0.395 ipTM=0.27 tol=11.1 2024-07-28 12:55:39,036 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.8 pTM=0.391 ipTM=0.206 tol=16.4 2024-07-28 12:55:48,318 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.3 pTM=0.396 ipTM=0.271 tol=8.53 2024-07-28 12:55:57,613 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.1 pTM=0.389 ipTM=0.204 tol=4.41 2024-07-28 12:56:06,869 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.4 pTM=0.394 ipTM=0.26 tol=7.46 2024-07-28 12:56:16,148 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.1 pTM=0.391 ipTM=0.197 tol=5.55 2024-07-28 12:56:25,426 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.2 pTM=0.391 ipTM=0.244 tol=9.43 2024-07-28 12:56:34,709 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=45.8 pTM=0.389 ipTM=0.201 tol=8.32 2024-07-28 12:56:44,028 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.1 pTM=0.395 ipTM=0.273 tol=8.34 2024-07-28 12:56:53,324 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=45.8 pTM=0.391 ipTM=0.204 tol=8.69 2024-07-28 12:57:02,656 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=45.7 pTM=0.393 ipTM=0.259 tol=10.1 2024-07-28 12:57:11,970 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=45.8 pTM=0.39 ipTM=0.204 tol=9.92 2024-07-28 12:57:21,297 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.1 pTM=0.394 ipTM=0.241 tol=9.98 2024-07-28 12:57:30,620 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.1 pTM=0.39 ipTM=0.195 tol=8.98 2024-07-28 12:57:39,922 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.2 pTM=0.392 ipTM=0.229 tol=8.46 2024-07-28 12:57:49,224 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=45.9 pTM=0.388 ipTM=0.183 tol=6.26 2024-07-28 12:57:58,524 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=45.9 pTM=0.391 ipTM=0.208 tol=6.23 2024-07-28 12:58:07,834 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=45.8 pTM=0.391 ipTM=0.19 tol=5.33 2024-07-28 12:58:17,145 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.1 pTM=0.391 ipTM=0.204 tol=3.33 2024-07-28 12:58:26,453 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=45.8 pTM=0.392 ipTM=0.181 tol=7.29 2024-07-28 12:58:35,764 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.1 pTM=0.392 ipTM=0.193 tol=5.98 2024-07-28 12:58:45,110 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=45.7 pTM=0.388 ipTM=0.166 tol=3.29 2024-07-28 12:58:54,457 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=46 pTM=0.393 ipTM=0.199 tol=2.93 2024-07-28 12:59:03,778 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=45.9 pTM=0.39 ipTM=0.173 tol=3.5 2024-07-28 12:59:13,114 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.2 pTM=0.394 ipTM=0.236 tol=6.93 2024-07-28 12:59:22,435 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46 pTM=0.391 ipTM=0.179 tol=6.78 2024-07-28 12:59:31,739 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.1 pTM=0.392 ipTM=0.191 tol=6.87 2024-07-28 12:59:41,053 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46 pTM=0.389 ipTM=0.165 tol=8.12 2024-07-28 12:59:50,367 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=45.9 pTM=0.391 ipTM=0.178 tol=2.8 2024-07-28 12:59:59,682 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=46 pTM=0.391 ipTM=0.174 tol=2.23 2024-07-28 12:59:59,683 alphafold2_multimer_v3_model_1_seed_000 took 457.6s (30 recycles) 2024-07-28 13:00:09,354 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.4 pTM=0.391 ipTM=0.254 2024-07-28 13:00:18,756 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.7 pTM=0.413 ipTM=0.6 tol=18.5 2024-07-28 13:00:28,178 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49 pTM=0.403 ipTM=0.569 tol=8.91 2024-07-28 13:00:37,587 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=48.7 pTM=0.401 ipTM=0.561 tol=5.37 2024-07-28 13:00:47,003 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=48.3 pTM=0.396 ipTM=0.495 tol=4.5 2024-07-28 13:00:56,401 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.6 pTM=0.401 ipTM=0.559 tol=4.08 2024-07-28 13:01:05,817 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.4 pTM=0.402 ipTM=0.545 tol=2.31 2024-07-28 13:01:15,220 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.8 pTM=0.401 ipTM=0.566 tol=2.24 2024-07-28 13:01:24,622 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=48.6 pTM=0.401 ipTM=0.554 tol=2.03 2024-07-28 13:01:34,030 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.8 pTM=0.405 ipTM=0.612 tol=2.55 2024-07-28 13:01:43,458 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=48.8 pTM=0.405 ipTM=0.608 tol=2.94 2024-07-28 13:01:52,850 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.8 pTM=0.405 ipTM=0.6 tol=2.56 2024-07-28 13:02:02,205 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.8 pTM=0.405 ipTM=0.586 tol=2.52 2024-07-28 13:02:11,560 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=48.8 pTM=0.404 ipTM=0.585 tol=2.21 2024-07-28 13:02:20,915 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=48.6 pTM=0.403 ipTM=0.567 tol=2.99 2024-07-28 13:02:30,271 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.8 pTM=0.404 ipTM=0.581 tol=3.11 2024-07-28 13:02:39,627 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.5 pTM=0.399 ipTM=0.525 tol=3.33 2024-07-28 13:02:48,982 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.7 pTM=0.405 ipTM=0.587 tol=4.97 2024-07-28 13:02:58,339 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.7 pTM=0.405 ipTM=0.576 tol=2.76 2024-07-28 13:03:07,697 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=48.7 pTM=0.402 ipTM=0.554 tol=2.13 2024-07-28 13:03:17,053 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.5 pTM=0.401 ipTM=0.534 tol=2.66 2024-07-28 13:03:26,407 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=48.7 pTM=0.403 ipTM=0.564 tol=2.92 2024-07-28 13:03:35,763 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.4 pTM=0.403 ipTM=0.556 tol=2.22 2024-07-28 13:03:45,122 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.6 pTM=0.401 ipTM=0.545 tol=2.56 2024-07-28 13:03:54,482 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=48.8 pTM=0.403 ipTM=0.556 tol=2.67 2024-07-28 13:04:03,840 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=48.7 pTM=0.401 ipTM=0.536 tol=3.15 2024-07-28 13:04:13,193 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.7 pTM=0.405 ipTM=0.565 tol=2.55 2024-07-28 13:04:22,571 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.3 pTM=0.401 ipTM=0.494 tol=2.78 2024-07-28 13:04:31,961 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.8 pTM=0.404 ipTM=0.561 tol=3.05 2024-07-28 13:04:41,379 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.6 pTM=0.4 ipTM=0.531 tol=1.79 2024-07-28 13:04:50,776 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.7 pTM=0.399 ipTM=0.514 tol=3.44 2024-07-28 13:04:50,777 alphafold2_multimer_v3_model_2_seed_000 took 290.8s (30 recycles) 2024-07-28 13:05:00,496 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.1 pTM=0.407 ipTM=0.382 2024-07-28 13:05:09,938 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.6 pTM=0.393 ipTM=0.218 tol=15.5 2024-07-28 13:05:19,383 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46.6 pTM=0.393 ipTM=0.22 tol=8.57 2024-07-28 13:05:28,817 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.4 pTM=0.393 ipTM=0.202 tol=5.99 2024-07-28 13:05:38,274 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.5 pTM=0.394 ipTM=0.254 tol=5.17 2024-07-28 13:05:47,752 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.4 pTM=0.392 ipTM=0.209 tol=4.03 2024-07-28 13:05:57,206 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.3 pTM=0.396 ipTM=0.234 tol=3.68 2024-07-28 13:06:06,672 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.1 pTM=0.393 ipTM=0.2 tol=3.44 2024-07-28 13:06:16,119 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46.1 pTM=0.395 ipTM=0.222 tol=2.86 2024-07-28 13:06:25,573 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46.1 pTM=0.395 ipTM=0.217 tol=4.15 2024-07-28 13:06:35,020 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.2 pTM=0.395 ipTM=0.221 tol=3.34 2024-07-28 13:06:44,444 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.9 pTM=0.394 ipTM=0.208 tol=4.44 2024-07-28 13:06:53,861 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.1 pTM=0.395 ipTM=0.212 tol=4.32 2024-07-28 13:07:03,253 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=46.2 pTM=0.395 ipTM=0.244 tol=5.67 2024-07-28 13:07:12,638 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46 pTM=0.394 ipTM=0.219 tol=7.52 2024-07-28 13:07:22,046 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46.2 pTM=0.394 ipTM=0.22 tol=7.93 2024-07-28 13:07:31,436 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.2 pTM=0.393 ipTM=0.208 tol=6.53 2024-07-28 13:07:40,849 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46.2 pTM=0.392 ipTM=0.197 tol=5.35 2024-07-28 13:07:50,255 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=46.2 pTM=0.393 ipTM=0.195 tol=5.01 2024-07-28 13:07:59,667 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=46.5 pTM=0.393 ipTM=0.201 tol=4.7 2024-07-28 13:08:09,093 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=46.7 pTM=0.396 ipTM=0.238 tol=5.35 2024-07-28 13:08:18,481 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46.6 pTM=0.392 ipTM=0.213 tol=4.24 2024-07-28 13:08:27,873 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46.7 pTM=0.395 ipTM=0.238 tol=4.65 2024-07-28 13:08:37,262 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46.7 pTM=0.394 ipTM=0.226 tol=3.57 2024-07-28 13:08:46,652 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.8 pTM=0.394 ipTM=0.219 tol=3.13 2024-07-28 13:08:56,040 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=46.7 pTM=0.394 ipTM=0.216 tol=4.02 2024-07-28 13:09:05,461 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.7 pTM=0.394 ipTM=0.215 tol=4.46 2024-07-28 13:09:14,868 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46.7 pTM=0.395 ipTM=0.223 tol=4.3 2024-07-28 13:09:24,271 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.7 pTM=0.393 ipTM=0.201 tol=3.99 2024-07-28 13:09:33,733 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.7 pTM=0.395 ipTM=0.24 tol=6.68 2024-07-28 13:09:43,164 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46.6 pTM=0.392 ipTM=0.215 tol=4.22 2024-07-28 13:09:43,164 alphafold2_multimer_v3_model_3_seed_000 took 292.1s (30 recycles) 2024-07-28 13:09:52,863 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.1 pTM=0.395 ipTM=0.225 2024-07-28 13:10:02,240 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.2 pTM=0.4 ipTM=0.25 tol=16.6 2024-07-28 13:10:11,655 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.6 pTM=0.394 ipTM=0.203 tol=8.93 2024-07-28 13:10:21,071 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.6 pTM=0.393 ipTM=0.191 tol=5.96 2024-07-28 13:10:30,499 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45.7 pTM=0.391 ipTM=0.19 tol=4.05 2024-07-28 13:10:39,941 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=45.6 pTM=0.393 ipTM=0.19 tol=4.03 2024-07-28 13:10:49,348 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=45.7 pTM=0.393 ipTM=0.194 tol=4.2 2024-07-28 13:10:58,778 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.6 pTM=0.391 ipTM=0.185 tol=3.58 2024-07-28 13:11:08,167 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.5 pTM=0.394 ipTM=0.205 tol=3.78 2024-07-28 13:11:17,597 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.5 pTM=0.394 ipTM=0.19 tol=7.98 2024-07-28 13:11:27,020 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=45.3 pTM=0.393 ipTM=0.199 tol=7.78 2024-07-28 13:11:36,434 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=45.6 pTM=0.393 ipTM=0.188 tol=3.59 2024-07-28 13:11:45,856 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=45.4 pTM=0.39 ipTM=0.18 tol=3.36 2024-07-28 13:11:55,258 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=45.5 pTM=0.391 ipTM=0.181 tol=9.07 2024-07-28 13:12:04,646 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=45.4 pTM=0.391 ipTM=0.178 tol=6.16 2024-07-28 13:12:14,032 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=45.3 pTM=0.394 ipTM=0.188 tol=6.83 2024-07-28 13:12:23,442 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=45.3 pTM=0.392 ipTM=0.18 tol=5.76 2024-07-28 13:12:32,836 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=45 pTM=0.392 ipTM=0.183 tol=3.86 2024-07-28 13:12:42,254 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=45.3 pTM=0.393 ipTM=0.188 tol=6.7 2024-07-28 13:12:51,681 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=45.4 pTM=0.393 ipTM=0.18 tol=7.72 2024-07-28 13:13:01,075 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45.5 pTM=0.394 ipTM=0.187 tol=6.2 2024-07-28 13:13:10,470 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=45.5 pTM=0.391 ipTM=0.181 tol=6.58 2024-07-28 13:13:19,862 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.3 pTM=0.393 ipTM=0.183 tol=4.54 2024-07-28 13:13:29,285 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.5 pTM=0.392 ipTM=0.179 tol=7.27 2024-07-28 13:13:38,761 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.5 pTM=0.392 ipTM=0.189 tol=5.02 2024-07-28 13:13:48,213 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.6 pTM=0.393 ipTM=0.179 tol=6.73 2024-07-28 13:13:57,670 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=45.7 pTM=0.394 ipTM=0.199 tol=7.91 2024-07-28 13:14:07,142 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.5 pTM=0.395 ipTM=0.187 tol=7.36 2024-07-28 13:14:16,612 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=45.4 pTM=0.395 ipTM=0.188 tol=7.57 2024-07-28 13:14:26,064 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=45.3 pTM=0.395 ipTM=0.185 tol=8.05 2024-07-28 13:14:35,537 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=45.2 pTM=0.395 ipTM=0.198 tol=5.93 2024-07-28 13:14:35,538 alphafold2_multimer_v3_model_4_seed_000 took 292.1s (30 recycles) 2024-07-28 13:14:45,318 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.3 pTM=0.389 ipTM=0.17 2024-07-28 13:14:54,798 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=45.8 pTM=0.391 ipTM=0.208 tol=18.2 2024-07-28 13:15:04,239 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=45.8 pTM=0.39 ipTM=0.251 tol=7.15 2024-07-28 13:15:13,680 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.5 pTM=0.39 ipTM=0.191 tol=7.93 2024-07-28 13:15:23,112 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.8 pTM=0.391 ipTM=0.25 tol=4.06 2024-07-28 13:15:32,547 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=45.2 pTM=0.389 ipTM=0.19 tol=8.15 2024-07-28 13:15:41,980 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.7 pTM=0.393 ipTM=0.255 tol=9.1 2024-07-28 13:15:51,419 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=45.2 pTM=0.389 ipTM=0.19 tol=9.52 2024-07-28 13:16:00,845 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=45.2 pTM=0.394 ipTM=0.276 tol=5.64 2024-07-28 13:16:10,276 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=45.3 pTM=0.391 ipTM=0.196 tol=3.51 2024-07-28 13:16:19,699 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=45.5 pTM=0.394 ipTM=0.265 tol=10.3 2024-07-28 13:16:29,130 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=45.5 pTM=0.39 ipTM=0.19 tol=9.33 2024-07-28 13:16:38,564 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=45.4 pTM=0.392 ipTM=0.232 tol=3.93 2024-07-28 13:16:47,998 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=45.3 pTM=0.39 ipTM=0.189 tol=8.27 2024-07-28 13:16:57,426 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=45.4 pTM=0.394 ipTM=0.265 tol=10.2 2024-07-28 13:17:06,847 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=45.5 pTM=0.392 ipTM=0.214 tol=4.71 2024-07-28 13:17:16,276 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=45.3 pTM=0.393 ipTM=0.204 tol=11.6 2024-07-28 13:17:25,713 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=45.6 pTM=0.389 ipTM=0.194 tol=6.34 2024-07-28 13:17:35,196 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45.2 pTM=0.391 ipTM=0.19 tol=5.19 2024-07-28 13:17:44,668 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.7 pTM=0.389 ipTM=0.199 tol=6.04 2024-07-28 13:17:54,117 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.6 pTM=0.391 ipTM=0.195 tol=9.45 2024-07-28 13:18:03,586 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=45.5 pTM=0.391 ipTM=0.237 tol=8.98 2024-07-28 13:18:13,075 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45 pTM=0.389 ipTM=0.188 tol=8.48 2024-07-28 13:18:22,547 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.4 pTM=0.39 ipTM=0.206 tol=5.16 2024-07-28 13:18:32,013 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.5 pTM=0.391 ipTM=0.224 tol=10.2 2024-07-28 13:18:41,463 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.2 pTM=0.39 ipTM=0.201 tol=4.78 2024-07-28 13:18:50,939 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.2 pTM=0.391 ipTM=0.204 tol=4.61 2024-07-28 13:19:00,419 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.3 pTM=0.391 ipTM=0.221 tol=3.94 2024-07-28 13:19:09,886 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.2 pTM=0.389 ipTM=0.193 tol=6.54 2024-07-28 13:19:19,355 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=45.5 pTM=0.392 ipTM=0.237 tol=6.93 2024-07-28 13:19:28,826 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=45.3 pTM=0.389 ipTM=0.197 tol=8.42 2024-07-28 13:19:28,826 alphafold2_multimer_v3_model_5_seed_000 took 293.0s (30 recycles) 2024-07-28 13:19:29,116 reranking models by 'multimer' metric 2024-07-28 13:19:31,894 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 13:20:18,997 Relaxation took 49.9s 2024-07-28 13:20:18,998 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.7 pTM=0.399 ipTM=0.514 2024-07-28 13:21:16,114 Relaxation took 57.1s 2024-07-28 13:21:16,114 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46.6 pTM=0.392 ipTM=0.215 2024-07-28 13:22:28,535 Relaxation took 72.4s 2024-07-28 13:22:28,535 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=45.2 pTM=0.395 ipTM=0.198 2024-07-28 13:23:09,926 Relaxation took 41.4s 2024-07-28 13:23:09,926 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=45.3 pTM=0.389 ipTM=0.197 2024-07-28 13:23:47,626 Relaxation took 37.7s 2024-07-28 13:23:47,626 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=46 pTM=0.391 ipTM=0.174 2024-07-28 13:23:48,867 Done