2024-07-28 13:21:31,997 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 13:21:32,303 Running on GPU 2024-07-28 13:21:33,034 Found 6 citations for tools or databases 2024-07-28 13:21:33,034 Query 1/1: ZFP36L2_FBXO8 (length 816) 2024-07-28 13:21:33,463 Sleeping for 8s. Reason: PENDING 2024-07-28 13:21:41,912 Sleeping for 8s. Reason: RUNNING 2024-07-28 13:21:50,337 Sleeping for 8s. Reason: RUNNING 2024-07-28 13:21:58,761 Sleeping for 9s. Reason: RUNNING 2024-07-28 13:22:08,197 Sleeping for 9s. Reason: RUNNING 2024-07-28 13:22:17,635 Sleeping for 10s. Reason: RUNNING 2024-07-28 13:22:29,745 Sleeping for 8s. Reason: PENDING 2024-07-28 13:22:38,165 Sleeping for 10s. Reason: RUNNING 2024-07-28 13:22:48,591 Sleeping for 5s. Reason: RUNNING 2024-07-28 13:22:54,000 Sleeping for 9s. Reason: RUNNING 2024-07-28 13:23:06,125 Setting max_seq=508, max_extra_seq=2048 2024-07-28 13:25:30,236 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=42.7 pTM=0.374 ipTM=0.192 2024-07-28 13:25:42,120 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=41.9 pTM=0.372 ipTM=0.167 tol=15 2024-07-28 13:25:54,017 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=42 pTM=0.368 ipTM=0.153 tol=9.9 2024-07-28 13:26:05,942 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=42 pTM=0.367 ipTM=0.149 tol=9.3 2024-07-28 13:26:17,889 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=42.3 pTM=0.365 ipTM=0.143 tol=6.73 2024-07-28 13:26:29,859 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=42.4 pTM=0.365 ipTM=0.15 tol=6.89 2024-07-28 13:26:41,848 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=42 pTM=0.361 ipTM=0.141 tol=4.79 2024-07-28 13:26:53,856 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=42.2 pTM=0.361 ipTM=0.159 tol=3.46 2024-07-28 13:27:05,866 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=42.2 pTM=0.361 ipTM=0.153 tol=6.37 2024-07-28 13:27:17,887 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=42.4 pTM=0.363 ipTM=0.152 tol=4.93 2024-07-28 13:27:29,916 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=42.3 pTM=0.362 ipTM=0.158 tol=3.36 2024-07-28 13:27:41,942 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=42.2 pTM=0.364 ipTM=0.167 tol=4.82 2024-07-28 13:27:53,974 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=42.2 pTM=0.362 ipTM=0.162 tol=3.76 2024-07-28 13:28:06,026 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=42.5 pTM=0.363 ipTM=0.154 tol=2.74 2024-07-28 13:28:18,071 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=42.2 pTM=0.359 ipTM=0.146 tol=4.46 2024-07-28 13:28:30,141 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=42.1 pTM=0.362 ipTM=0.159 tol=3.17 2024-07-28 13:28:42,221 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=42.2 pTM=0.363 ipTM=0.159 tol=4.74 2024-07-28 13:28:54,268 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=42.2 pTM=0.363 ipTM=0.16 tol=2.95 2024-07-28 13:29:06,324 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=42.1 pTM=0.361 ipTM=0.146 tol=3.51 2024-07-28 13:29:18,393 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=42.1 pTM=0.362 ipTM=0.147 tol=3.12 2024-07-28 13:29:30,449 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=42.1 pTM=0.359 ipTM=0.148 tol=3.56 2024-07-28 13:29:42,509 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=42.2 pTM=0.361 ipTM=0.17 tol=2.87 2024-07-28 13:29:54,571 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=42.1 pTM=0.359 ipTM=0.157 tol=4.41 2024-07-28 13:30:06,627 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=42.2 pTM=0.361 ipTM=0.164 tol=3.51 2024-07-28 13:30:18,689 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=42.2 pTM=0.361 ipTM=0.147 tol=3.16 2024-07-28 13:30:30,736 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=42.4 pTM=0.361 ipTM=0.16 tol=3.26 2024-07-28 13:30:42,794 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=42.2 pTM=0.361 ipTM=0.151 tol=5.28 2024-07-28 13:30:54,859 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=42.4 pTM=0.363 ipTM=0.159 tol=4.75 2024-07-28 13:31:06,924 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=42.1 pTM=0.36 ipTM=0.144 tol=5.32 2024-07-28 13:31:18,984 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=42.4 pTM=0.361 ipTM=0.155 tol=3.64 2024-07-28 13:31:31,041 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=42.3 pTM=0.359 ipTM=0.144 tol=3.08 2024-07-28 13:31:31,042 alphafold2_multimer_v3_model_1_seed_000 took 501.2s (30 recycles) 2024-07-28 13:31:43,492 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=42.8 pTM=0.38 ipTM=0.24 2024-07-28 13:31:55,571 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=42.8 pTM=0.368 ipTM=0.169 tol=14.6 2024-07-28 13:32:07,662 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=43 pTM=0.363 ipTM=0.174 tol=12.5 2024-07-28 13:32:19,748 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=43.1 pTM=0.365 ipTM=0.159 tol=15.8 2024-07-28 13:32:31,833 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=43.3 pTM=0.365 ipTM=0.254 tol=8.88 2024-07-28 13:32:43,923 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=43.8 pTM=0.369 ipTM=0.17 tol=8.05 2024-07-28 13:32:55,995 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=43.1 pTM=0.374 ipTM=0.169 tol=15.7 2024-07-28 13:33:08,065 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=43.5 pTM=0.378 ipTM=0.209 tol=6.44 2024-07-28 13:33:20,140 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=43.5 pTM=0.378 ipTM=0.172 tol=4.81 2024-07-28 13:33:32,219 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=43.8 pTM=0.375 ipTM=0.2 tol=4.73 2024-07-28 13:33:44,306 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=43.8 pTM=0.373 ipTM=0.173 tol=8.52 2024-07-28 13:33:56,396 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=43.9 pTM=0.373 ipTM=0.209 tol=6.29 2024-07-28 13:34:08,480 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=43.5 pTM=0.375 ipTM=0.179 tol=10.6 2024-07-28 13:34:20,558 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=43.6 pTM=0.374 ipTM=0.194 tol=4.12 2024-07-28 13:34:32,629 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=43.6 pTM=0.372 ipTM=0.17 tol=4.12 2024-07-28 13:34:44,718 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=43.8 pTM=0.373 ipTM=0.218 tol=8.07 2024-07-28 13:34:56,826 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=43.7 pTM=0.373 ipTM=0.177 tol=8.15 2024-07-28 13:35:08,914 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=43.7 pTM=0.371 ipTM=0.164 tol=6.55 2024-07-28 13:35:21,004 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=43.9 pTM=0.376 ipTM=0.244 tol=6.66 2024-07-28 13:35:33,091 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=43.4 pTM=0.372 ipTM=0.168 tol=10.1 2024-07-28 13:35:45,183 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=43.8 pTM=0.371 ipTM=0.161 tol=8.68 2024-07-28 13:35:57,268 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=43.8 pTM=0.375 ipTM=0.249 tol=6.22 2024-07-28 13:36:09,362 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=43.8 pTM=0.373 ipTM=0.164 tol=7.26 2024-07-28 13:36:21,449 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=43.8 pTM=0.371 ipTM=0.168 tol=8.19 2024-07-28 13:36:33,544 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=44 pTM=0.374 ipTM=0.185 tol=6.63 2024-07-28 13:36:45,637 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=43.8 pTM=0.372 ipTM=0.172 tol=4.52 2024-07-28 13:36:57,741 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=44.1 pTM=0.375 ipTM=0.192 tol=6.65 2024-07-28 13:37:09,849 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=44 pTM=0.375 ipTM=0.176 tol=5.43 2024-07-28 13:37:21,965 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=44.3 pTM=0.374 ipTM=0.195 tol=6.09 2024-07-28 13:37:34,072 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=44 pTM=0.374 ipTM=0.162 tol=14.3 2024-07-28 13:37:46,175 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=44.2 pTM=0.373 ipTM=0.162 tol=9.77 2024-07-28 13:37:46,176 alphafold2_multimer_v3_model_2_seed_000 took 374.7s (30 recycles) 2024-07-28 13:37:58,708 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=43.2 pTM=0.37 ipTM=0.142 2024-07-28 13:38:10,864 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=42.6 pTM=0.365 ipTM=0.163 tol=12.6 2024-07-28 13:38:23,027 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=41.8 pTM=0.36 ipTM=0.151 tol=8.45 2024-07-28 13:38:35,193 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=41.6 pTM=0.353 ipTM=0.147 tol=12.1 2024-07-28 13:38:47,360 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=41.6 pTM=0.354 ipTM=0.155 tol=6.91 2024-07-28 13:38:59,518 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=41.5 pTM=0.355 ipTM=0.175 tol=4.85 2024-07-28 13:39:11,684 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=41.3 pTM=0.354 ipTM=0.154 tol=4.57 2024-07-28 13:39:23,837 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=41.2 pTM=0.352 ipTM=0.167 tol=4.03 2024-07-28 13:39:35,990 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=41.5 pTM=0.354 ipTM=0.153 tol=3.01 2024-07-28 13:39:48,152 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.6 pTM=0.354 ipTM=0.163 tol=4.02 2024-07-28 13:40:00,312 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.2 pTM=0.352 ipTM=0.147 tol=2.79 2024-07-28 13:40:12,477 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.3 pTM=0.352 ipTM=0.151 tol=3.12 2024-07-28 13:40:24,640 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=41.3 pTM=0.353 ipTM=0.158 tol=4.28 2024-07-28 13:40:36,804 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=41.5 pTM=0.357 ipTM=0.198 tol=4.78 2024-07-28 13:40:48,958 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=41.4 pTM=0.353 ipTM=0.158 tol=3.77 2024-07-28 13:41:01,112 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.3 pTM=0.356 ipTM=0.191 tol=3.54 2024-07-28 13:41:13,273 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=41.3 pTM=0.353 ipTM=0.152 tol=4.36 2024-07-28 13:41:25,428 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=41.4 pTM=0.355 ipTM=0.188 tol=3.08 2024-07-28 13:41:37,593 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.5 pTM=0.354 ipTM=0.145 tol=4.61 2024-07-28 13:41:49,765 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=41.5 pTM=0.354 ipTM=0.176 tol=6.18 2024-07-28 13:42:01,933 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=40.6 pTM=0.354 ipTM=0.154 tol=17.2 2024-07-28 13:42:14,111 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=41.2 pTM=0.351 ipTM=0.151 tol=14.4 2024-07-28 13:42:26,269 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=41.4 pTM=0.352 ipTM=0.163 tol=10.5 2024-07-28 13:42:38,436 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=41.4 pTM=0.355 ipTM=0.2 tol=9.09 2024-07-28 13:42:50,606 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=41.5 pTM=0.353 ipTM=0.157 tol=7.73 2024-07-28 13:43:02,773 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=41.6 pTM=0.356 ipTM=0.191 tol=5.47 2024-07-28 13:43:14,958 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=41.7 pTM=0.354 ipTM=0.17 tol=5.67 2024-07-28 13:43:27,134 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=41.8 pTM=0.358 ipTM=0.201 tol=4.93 2024-07-28 13:43:39,318 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=41.5 pTM=0.353 ipTM=0.165 tol=7.97 2024-07-28 13:43:51,496 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=41.7 pTM=0.357 ipTM=0.197 tol=8.39 2024-07-28 13:44:03,677 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=41.8 pTM=0.354 ipTM=0.17 tol=4.64 2024-07-28 13:44:03,678 alphafold2_multimer_v3_model_3_seed_000 took 377.1s (30 recycles) 2024-07-28 13:44:16,171 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.3 pTM=0.379 ipTM=0.201 2024-07-28 13:44:28,282 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=39.8 pTM=0.354 ipTM=0.147 tol=19.9 2024-07-28 13:44:40,421 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=39.8 pTM=0.352 ipTM=0.15 tol=12.5 2024-07-28 13:44:52,553 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=40.5 pTM=0.356 ipTM=0.152 tol=5.79 2024-07-28 13:45:04,692 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=40.4 pTM=0.361 ipTM=0.177 tol=5.05 2024-07-28 13:45:16,820 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=40.3 pTM=0.356 ipTM=0.154 tol=4.61 2024-07-28 13:45:28,948 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=40.4 pTM=0.357 ipTM=0.155 tol=5.66 2024-07-28 13:45:41,071 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=40.2 pTM=0.359 ipTM=0.163 tol=5.36 2024-07-28 13:45:53,209 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=40.5 pTM=0.362 ipTM=0.166 tol=7.38 2024-07-28 13:46:05,345 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=40.7 pTM=0.358 ipTM=0.158 tol=7.27 2024-07-28 13:46:17,478 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=40.6 pTM=0.363 ipTM=0.164 tol=5.45 2024-07-28 13:46:29,607 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=40.5 pTM=0.362 ipTM=0.16 tol=5.59 2024-07-28 13:46:41,740 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=40.5 pTM=0.363 ipTM=0.158 tol=7.71 2024-07-28 13:46:53,883 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=40.8 pTM=0.363 ipTM=0.157 tol=8.53 2024-07-28 13:47:06,019 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=40.4 pTM=0.357 ipTM=0.149 tol=8.05 2024-07-28 13:47:18,159 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=40.2 pTM=0.357 ipTM=0.145 tol=4.23 2024-07-28 13:47:30,305 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=40.7 pTM=0.361 ipTM=0.146 tol=6.3 2024-07-28 13:47:42,461 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=40.6 pTM=0.359 ipTM=0.144 tol=4.27 2024-07-28 13:47:54,613 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=40.7 pTM=0.36 ipTM=0.141 tol=7.77 2024-07-28 13:48:06,767 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=40.5 pTM=0.356 ipTM=0.156 tol=7.79 2024-07-28 13:48:18,917 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=40.3 pTM=0.359 ipTM=0.155 tol=4.64 2024-07-28 13:48:31,068 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=40.4 pTM=0.357 ipTM=0.149 tol=5.32 2024-07-28 13:48:43,221 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=40.6 pTM=0.356 ipTM=0.151 tol=6.04 2024-07-28 13:48:55,377 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=41 pTM=0.36 ipTM=0.146 tol=3.54 2024-07-28 13:49:07,528 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=40.9 pTM=0.361 ipTM=0.15 tol=3.21 2024-07-28 13:49:19,668 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=40.5 pTM=0.362 ipTM=0.171 tol=5.06 2024-07-28 13:49:31,816 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=41 pTM=0.36 ipTM=0.146 tol=8.09 2024-07-28 13:49:43,971 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=40.9 pTM=0.365 ipTM=0.154 tol=8.34 2024-07-28 13:49:56,114 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=40.5 pTM=0.359 ipTM=0.152 tol=8.87 2024-07-28 13:50:08,258 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=41.1 pTM=0.365 ipTM=0.177 tol=7.01 2024-07-28 13:50:20,394 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=40.7 pTM=0.361 ipTM=0.17 tol=7.02 2024-07-28 13:50:20,395 alphafold2_multimer_v3_model_4_seed_000 took 376.3s (30 recycles) 2024-07-28 13:50:32,985 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=42.7 pTM=0.368 ipTM=0.202 2024-07-28 13:50:45,204 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=41.8 pTM=0.363 ipTM=0.158 tol=12.2 2024-07-28 13:50:57,410 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=41.2 pTM=0.357 ipTM=0.156 tol=7.19 2024-07-28 13:51:09,628 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=41.1 pTM=0.351 ipTM=0.145 tol=7.14 2024-07-28 13:51:21,843 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.2 pTM=0.351 ipTM=0.146 tol=7.76 2024-07-28 13:51:34,048 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=41.2 pTM=0.35 ipTM=0.139 tol=9.13 2024-07-28 13:51:46,257 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=41.2 pTM=0.35 ipTM=0.14 tol=6.73 2024-07-28 13:51:58,460 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=41.2 pTM=0.348 ipTM=0.135 tol=7.24 2024-07-28 13:52:10,659 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=41.4 pTM=0.35 ipTM=0.138 tol=5.72 2024-07-28 13:52:22,857 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=41.7 pTM=0.351 ipTM=0.135 tol=6.06 2024-07-28 13:52:35,066 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=41.5 pTM=0.351 ipTM=0.144 tol=3.97 2024-07-28 13:52:47,271 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=41.2 pTM=0.349 ipTM=0.135 tol=5.36 2024-07-28 13:52:59,479 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=41.2 pTM=0.35 ipTM=0.148 tol=5.83 2024-07-28 13:53:11,693 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=41.5 pTM=0.349 ipTM=0.136 tol=6.35 2024-07-28 13:53:23,899 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=41.1 pTM=0.348 ipTM=0.144 tol=6.95 2024-07-28 13:53:36,088 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=41.3 pTM=0.35 ipTM=0.143 tol=7.43 2024-07-28 13:53:48,293 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=41.3 pTM=0.352 ipTM=0.151 tol=4.86 2024-07-28 13:54:00,486 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=41.2 pTM=0.35 ipTM=0.14 tol=10.2 2024-07-28 13:54:12,687 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=41.3 pTM=0.352 ipTM=0.141 tol=4.87 2024-07-28 13:54:24,889 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=41.2 pTM=0.35 ipTM=0.154 tol=4.33 2024-07-28 13:54:37,085 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=41.1 pTM=0.351 ipTM=0.144 tol=8.73 2024-07-28 13:54:49,279 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=41.6 pTM=0.352 ipTM=0.14 tol=4.16 2024-07-28 13:55:01,472 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=41.2 pTM=0.352 ipTM=0.145 tol=5.61 2024-07-28 13:55:13,655 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=41.3 pTM=0.352 ipTM=0.138 tol=3.23 2024-07-28 13:55:25,857 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=41.4 pTM=0.352 ipTM=0.137 tol=6.91 2024-07-28 13:55:38,051 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=41.2 pTM=0.349 ipTM=0.138 tol=6.5 2024-07-28 13:55:50,253 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=41.9 pTM=0.358 ipTM=0.137 tol=3.5 2024-07-28 13:56:02,452 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=41.4 pTM=0.352 ipTM=0.137 tol=3.59 2024-07-28 13:56:14,656 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=41.3 pTM=0.353 ipTM=0.139 tol=4.02 2024-07-28 13:56:26,859 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=41.5 pTM=0.352 ipTM=0.137 tol=7.68 2024-07-28 13:56:39,052 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=41.5 pTM=0.352 ipTM=0.155 tol=4.21 2024-07-28 13:56:39,053 alphafold2_multimer_v3_model_5_seed_000 took 378.2s (30 recycles) 2024-07-28 13:56:39,473 reranking models by 'multimer' metric 2024-07-28 13:56:42,511 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 13:57:53,341 Relaxation took 73.9s 2024-07-28 13:57:53,341 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=40.7 pTM=0.361 ipTM=0.17 2024-07-28 13:59:02,374 Relaxation took 69.0s 2024-07-28 13:59:02,374 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=41.8 pTM=0.354 ipTM=0.17 2024-07-28 14:00:03,428 Relaxation took 61.1s 2024-07-28 14:00:03,428 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=44.2 pTM=0.373 ipTM=0.162 2024-07-28 14:01:03,203 Relaxation took 59.8s 2024-07-28 14:01:03,203 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=41.5 pTM=0.352 ipTM=0.155 2024-07-28 14:02:24,267 Relaxation took 81.1s 2024-07-28 14:02:24,267 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=42.3 pTM=0.359 ipTM=0.144 2024-07-28 14:02:25,658 Done