2024-07-28 15:05:57,495 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 15:05:57,827 Running on GPU 2024-07-28 15:06:01,457 Found 6 citations for tools or databases 2024-07-28 15:06:01,457 Query 1/1: ZNF394_BTBD6 (length 1099) 2024-07-28 15:06:01,928 Sleeping for 8s. Reason: PENDING 2024-07-28 15:06:10,346 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:06:15,799 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:06:21,209 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:06:30,643 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:06:41,054 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:06:47,498 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:06:53,928 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:06:59,366 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:07:06,800 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:07:16,230 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:07:21,661 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:07:29,097 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:07:34,530 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:07:41,951 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:07:51,398 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:08:01,827 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:08:10,242 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:08:20,684 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:08:28,125 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:08:35,540 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:08:41,975 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:08:50,380 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:09:00,827 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:09:08,245 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:09:15,669 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:09:24,105 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:09:30,540 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:09:40,962 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:09:49,400 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:09:58,835 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:10:05,253 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:10:10,699 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:10:20,120 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:10:27,595 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:10:38,048 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:10:50,502 Sleeping for 9s. Reason: PENDING 2024-07-28 15:10:59,932 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:11:08,340 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:11:13,750 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:11:23,179 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:11:28,589 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:11:37,023 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:11:43,431 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:11:52,846 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:11:58,293 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:12:04,717 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:12:15,140 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:12:20,552 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:12:26,961 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:12:33,392 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:12:42,830 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:12:50,270 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:13:02,159 Setting max_seq=508, max_extra_seq=2048 2024-07-28 15:16:34,642 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.7 pTM=0.403 ipTM=0.156 2024-07-28 15:17:02,943 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.4 pTM=0.414 ipTM=0.146 tol=11.2 2024-07-28 15:17:31,376 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.7 pTM=0.421 ipTM=0.149 tol=7.66 2024-07-28 15:17:59,909 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.4 pTM=0.418 ipTM=0.145 tol=4.35 2024-07-28 15:18:28,502 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.4 pTM=0.419 ipTM=0.146 tol=3.78 2024-07-28 15:18:57,153 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.6 pTM=0.419 ipTM=0.144 tol=3.24 2024-07-28 15:19:25,828 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.4 pTM=0.42 ipTM=0.146 tol=2.8 2024-07-28 15:19:54,526 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.5 pTM=0.419 ipTM=0.144 tol=3.25 2024-07-28 15:20:23,236 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.3 pTM=0.42 ipTM=0.146 tol=2.13 2024-07-28 15:20:51,961 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.2 pTM=0.417 ipTM=0.145 tol=2.3 2024-07-28 15:21:20,692 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.3 pTM=0.417 ipTM=0.145 tol=2.72 2024-07-28 15:21:49,416 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.2 pTM=0.418 ipTM=0.145 tol=5.53 2024-07-28 15:22:18,148 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.8 pTM=0.422 ipTM=0.146 tol=5.46 2024-07-28 15:22:46,876 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.6 pTM=0.421 ipTM=0.146 tol=2.98 2024-07-28 15:23:15,603 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.5 pTM=0.421 ipTM=0.147 tol=4.14 2024-07-28 15:23:44,344 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.3 pTM=0.42 ipTM=0.148 tol=5.29 2024-07-28 15:24:13,091 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.4 pTM=0.417 ipTM=0.146 tol=4.81 2024-07-28 15:24:41,843 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.6 pTM=0.42 ipTM=0.147 tol=3.1 2024-07-28 15:25:10,579 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.4 pTM=0.42 ipTM=0.148 tol=5.67 2024-07-28 15:25:39,319 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.2 pTM=0.418 ipTM=0.148 tol=3.62 2024-07-28 15:26:08,070 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.3 pTM=0.42 ipTM=0.149 tol=3.81 2024-07-28 15:26:36,825 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.4 pTM=0.419 ipTM=0.147 tol=2.48 2024-07-28 15:27:05,568 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.8 pTM=0.424 ipTM=0.148 tol=5.19 2024-07-28 15:27:34,295 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.3 pTM=0.418 ipTM=0.148 tol=3.66 2024-07-28 15:28:03,019 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.1 pTM=0.417 ipTM=0.147 tol=4.36 2024-07-28 15:28:31,750 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.4 pTM=0.42 ipTM=0.147 tol=3.24 2024-07-28 15:29:00,483 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.9 pTM=0.421 ipTM=0.147 tol=4.17 2024-07-28 15:29:29,196 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.2 pTM=0.417 ipTM=0.146 tol=4.55 2024-07-28 15:29:57,890 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.6 pTM=0.42 ipTM=0.147 tol=3.96 2024-07-28 15:30:26,599 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.5 pTM=0.418 ipTM=0.147 tol=3.83 2024-07-28 15:30:55,338 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.3 pTM=0.418 ipTM=0.148 tol=2.51 2024-07-28 15:30:55,338 alphafold2_multimer_v3_model_1_seed_000 took 1066.4s (30 recycles) 2024-07-28 15:31:24,830 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.1 pTM=0.414 ipTM=0.149 2024-07-28 15:31:53,654 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.5 pTM=0.425 ipTM=0.148 tol=10.1 2024-07-28 15:32:22,451 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.6 pTM=0.43 ipTM=0.156 tol=6.18 2024-07-28 15:32:51,267 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.9 pTM=0.429 ipTM=0.156 tol=2.55 2024-07-28 15:33:20,096 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.8 pTM=0.43 ipTM=0.156 tol=8.97 2024-07-28 15:33:48,959 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.1 pTM=0.429 ipTM=0.157 tol=8.98 2024-07-28 15:34:17,778 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.9 pTM=0.432 ipTM=0.155 tol=3.24 2024-07-28 15:34:46,597 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56 pTM=0.429 ipTM=0.157 tol=5.41 2024-07-28 15:35:15,411 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.7 pTM=0.433 ipTM=0.153 tol=4.88 2024-07-28 15:35:44,233 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.2 pTM=0.431 ipTM=0.152 tol=3.76 2024-07-28 15:36:13,037 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.9 pTM=0.431 ipTM=0.151 tol=5.31 2024-07-28 15:36:41,858 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56 pTM=0.43 ipTM=0.153 tol=6.43 2024-07-28 15:37:10,693 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.1 pTM=0.435 ipTM=0.153 tol=6.13 2024-07-28 15:37:39,523 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56 pTM=0.431 ipTM=0.154 tol=3.79 2024-07-28 15:38:08,356 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.2 pTM=0.433 ipTM=0.156 tol=5.27 2024-07-28 15:38:37,189 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.3 pTM=0.431 ipTM=0.155 tol=6.2 2024-07-28 15:39:06,045 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.3 pTM=0.431 ipTM=0.153 tol=4.64 2024-07-28 15:39:34,907 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.4 pTM=0.433 ipTM=0.153 tol=4.76 2024-07-28 15:40:03,771 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56 pTM=0.432 ipTM=0.153 tol=5.21 2024-07-28 15:40:32,627 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.9 pTM=0.43 ipTM=0.153 tol=3.82 2024-07-28 15:41:01,473 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56 pTM=0.432 ipTM=0.152 tol=4.92 2024-07-28 15:41:30,320 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.2 pTM=0.43 ipTM=0.151 tol=6.38 2024-07-28 15:41:59,157 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.2 pTM=0.435 ipTM=0.152 tol=5.08 2024-07-28 15:42:27,985 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.1 pTM=0.428 ipTM=0.153 tol=4.62 2024-07-28 15:42:56,807 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56 pTM=0.431 ipTM=0.153 tol=5.59 2024-07-28 15:43:25,648 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.1 pTM=0.429 ipTM=0.153 tol=3.8 2024-07-28 15:43:54,504 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.2 pTM=0.432 ipTM=0.152 tol=3.97 2024-07-28 15:44:23,341 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.2 pTM=0.43 ipTM=0.153 tol=2.42 2024-07-28 15:44:52,175 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56 pTM=0.43 ipTM=0.152 tol=2.59 2024-07-28 15:45:21,000 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.2 pTM=0.429 ipTM=0.152 tol=2.72 2024-07-28 15:45:49,836 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.9 pTM=0.429 ipTM=0.154 tol=2.81 2024-07-28 15:45:49,837 alphafold2_multimer_v3_model_2_seed_000 took 893.8s (30 recycles) 2024-07-28 15:46:19,479 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.5 pTM=0.414 ipTM=0.147 2024-07-28 15:46:48,382 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.9 pTM=0.436 ipTM=0.162 tol=24.5 2024-07-28 15:47:17,271 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.6 pTM=0.437 ipTM=0.163 tol=9.84 2024-07-28 15:47:46,202 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.7 pTM=0.438 ipTM=0.162 tol=13.1 2024-07-28 15:48:15,142 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.8 pTM=0.439 ipTM=0.16 tol=5.98 2024-07-28 15:48:44,093 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.8 pTM=0.442 ipTM=0.161 tol=3.37 2024-07-28 15:49:13,036 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.6 pTM=0.442 ipTM=0.163 tol=2.87 2024-07-28 15:49:41,978 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.8 pTM=0.442 ipTM=0.164 tol=2.75 2024-07-28 15:50:10,933 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.7 pTM=0.441 ipTM=0.159 tol=2.17 2024-07-28 15:50:39,881 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.9 pTM=0.443 ipTM=0.165 tol=2.38 2024-07-28 15:51:08,852 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.8 pTM=0.441 ipTM=0.159 tol=2.91 2024-07-28 15:51:37,817 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.9 pTM=0.444 ipTM=0.167 tol=2.51 2024-07-28 15:52:06,779 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55 pTM=0.443 ipTM=0.161 tol=2.38 2024-07-28 15:52:35,738 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.1 pTM=0.445 ipTM=0.167 tol=2.97 2024-07-28 15:53:04,678 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.9 pTM=0.442 ipTM=0.16 tol=2.68 2024-07-28 15:53:33,613 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=55.1 pTM=0.443 ipTM=0.167 tol=2.93 2024-07-28 15:54:02,563 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=55.1 pTM=0.439 ipTM=0.159 tol=2.43 2024-07-28 15:54:31,476 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.2 pTM=0.443 ipTM=0.169 tol=2.38 2024-07-28 15:55:00,402 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=55.2 pTM=0.442 ipTM=0.161 tol=2.12 2024-07-28 15:55:29,319 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.2 pTM=0.446 ipTM=0.171 tol=2.46 2024-07-28 15:55:58,237 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=55 pTM=0.443 ipTM=0.161 tol=2.21 2024-07-28 15:56:27,134 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.2 pTM=0.444 ipTM=0.166 tol=2.29 2024-07-28 15:56:56,087 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.1 pTM=0.441 ipTM=0.159 tol=2.56 2024-07-28 15:57:25,007 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.2 pTM=0.443 ipTM=0.171 tol=2.57 2024-07-28 15:57:53,913 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.9 pTM=0.439 ipTM=0.157 tol=2.12 2024-07-28 15:58:22,793 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=55.2 pTM=0.445 ipTM=0.17 tol=1.8 2024-07-28 15:58:51,689 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=55 pTM=0.441 ipTM=0.161 tol=2.5 2024-07-28 15:59:20,561 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.3 pTM=0.443 ipTM=0.167 tol=3.04 2024-07-28 15:59:49,502 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.2 pTM=0.44 ipTM=0.161 tol=3.4 2024-07-28 16:00:18,399 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.2 pTM=0.443 ipTM=0.167 tol=2.15 2024-07-28 16:00:47,292 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55 pTM=0.441 ipTM=0.161 tol=2.7 2024-07-28 16:00:47,293 alphafold2_multimer_v3_model_3_seed_000 took 896.7s (30 recycles) 2024-07-28 16:01:16,830 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.2 pTM=0.424 ipTM=0.166 2024-07-28 16:01:45,661 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.4 pTM=0.432 ipTM=0.151 tol=16.2 2024-07-28 16:02:14,554 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.7 pTM=0.428 ipTM=0.142 tol=10.4 2024-07-28 16:02:43,401 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.2 pTM=0.43 ipTM=0.148 tol=8.06 2024-07-28 16:03:12,302 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.2 pTM=0.425 ipTM=0.142 tol=6.47 2024-07-28 16:03:41,192 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.2 pTM=0.434 ipTM=0.15 tol=5.27 2024-07-28 16:04:10,118 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.1 pTM=0.432 ipTM=0.146 tol=5.75 2024-07-28 16:04:39,040 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55 pTM=0.43 ipTM=0.149 tol=5.85 2024-07-28 16:05:07,986 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.1 pTM=0.428 ipTM=0.142 tol=6.51 2024-07-28 16:05:36,927 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55 pTM=0.43 ipTM=0.149 tol=5.18 2024-07-28 16:06:05,879 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55 pTM=0.425 ipTM=0.142 tol=5.39 2024-07-28 16:06:34,826 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.1 pTM=0.431 ipTM=0.147 tol=4.51 2024-07-28 16:07:03,780 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.3 pTM=0.433 ipTM=0.142 tol=5.64 2024-07-28 16:07:32,728 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.1 pTM=0.432 ipTM=0.146 tol=2.16 2024-07-28 16:08:01,675 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=54.8 pTM=0.429 ipTM=0.143 tol=6.55 2024-07-28 16:08:30,645 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.3 pTM=0.43 ipTM=0.146 tol=2.08 2024-07-28 16:08:59,629 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.3 pTM=0.427 ipTM=0.142 tol=3.41 2024-07-28 16:09:28,670 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.8 pTM=0.427 ipTM=0.148 tol=11.2 2024-07-28 16:09:57,654 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.5 pTM=0.427 ipTM=0.145 tol=7.11 2024-07-28 16:10:26,629 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.1 pTM=0.427 ipTM=0.146 tol=6.55 2024-07-28 16:10:55,623 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.5 pTM=0.429 ipTM=0.145 tol=6.09 2024-07-28 16:11:24,613 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.4 pTM=0.428 ipTM=0.147 tol=5.88 2024-07-28 16:11:53,609 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.7 pTM=0.43 ipTM=0.146 tol=6.65 2024-07-28 16:12:22,577 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.3 pTM=0.426 ipTM=0.148 tol=8.85 2024-07-28 16:12:51,537 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.2 pTM=0.426 ipTM=0.146 tol=8.38 2024-07-28 16:13:20,502 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.3 pTM=0.429 ipTM=0.146 tol=7.94 2024-07-28 16:13:49,482 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.3 pTM=0.429 ipTM=0.145 tol=6.27 2024-07-28 16:14:18,437 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55 pTM=0.428 ipTM=0.144 tol=4.08 2024-07-28 16:14:47,387 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.1 pTM=0.426 ipTM=0.145 tol=2.59 2024-07-28 16:15:16,327 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.1 pTM=0.431 ipTM=0.146 tol=2.85 2024-07-28 16:15:45,278 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=54.6 pTM=0.426 ipTM=0.146 tol=2.76 2024-07-28 16:15:45,279 alphafold2_multimer_v3_model_4_seed_000 took 897.3s (30 recycles) 2024-07-28 16:16:14,983 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.7 pTM=0.415 ipTM=0.143 2024-07-28 16:16:43,912 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.8 pTM=0.429 ipTM=0.151 tol=14.3 2024-07-28 16:17:12,843 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.9 pTM=0.43 ipTM=0.149 tol=7.82 2024-07-28 16:17:41,777 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.8 pTM=0.431 ipTM=0.149 tol=6.71 2024-07-28 16:18:10,733 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55 pTM=0.432 ipTM=0.15 tol=5.17 2024-07-28 16:18:39,707 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55 pTM=0.434 ipTM=0.15 tol=3.04 2024-07-28 16:19:08,662 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.8 pTM=0.436 ipTM=0.153 tol=6.87 2024-07-28 16:19:37,605 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.7 pTM=0.433 ipTM=0.15 tol=6.4 2024-07-28 16:20:06,555 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.7 pTM=0.435 ipTM=0.149 tol=7.28 2024-07-28 16:20:35,519 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.7 pTM=0.433 ipTM=0.148 tol=6.22 2024-07-28 16:21:04,479 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.8 pTM=0.434 ipTM=0.15 tol=4.7 2024-07-28 16:21:33,440 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.8 pTM=0.434 ipTM=0.15 tol=5.44 2024-07-28 16:22:02,422 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.8 pTM=0.435 ipTM=0.148 tol=2.41 2024-07-28 16:22:31,393 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.8 pTM=0.435 ipTM=0.151 tol=1.87 2024-07-28 16:23:00,360 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.8 pTM=0.436 ipTM=0.15 tol=1.95 2024-07-28 16:23:29,337 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.8 pTM=0.433 ipTM=0.15 tol=2.3 2024-07-28 16:23:58,315 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.9 pTM=0.432 ipTM=0.148 tol=6.15 2024-07-28 16:24:27,307 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.9 pTM=0.433 ipTM=0.147 tol=6.62 2024-07-28 16:24:56,303 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55 pTM=0.435 ipTM=0.15 tol=2.69 2024-07-28 16:25:25,291 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.6 pTM=0.432 ipTM=0.148 tol=8.55 2024-07-28 16:25:54,295 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.8 pTM=0.432 ipTM=0.148 tol=9.09 2024-07-28 16:26:23,287 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.8 pTM=0.433 ipTM=0.149 tol=4.59 2024-07-28 16:26:52,241 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.9 pTM=0.435 ipTM=0.151 tol=3.43 2024-07-28 16:27:21,211 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.8 pTM=0.431 ipTM=0.149 tol=6.25 2024-07-28 16:27:50,185 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.7 pTM=0.433 ipTM=0.149 tol=5.43 2024-07-28 16:28:19,155 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.7 pTM=0.433 ipTM=0.151 tol=7.16 2024-07-28 16:28:48,132 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.7 pTM=0.432 ipTM=0.149 tol=4.78 2024-07-28 16:29:17,095 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.7 pTM=0.433 ipTM=0.152 tol=3.05 2024-07-28 16:29:46,046 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.7 pTM=0.433 ipTM=0.151 tol=2.54 2024-07-28 16:30:14,995 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.7 pTM=0.432 ipTM=0.15 tol=2.11 2024-07-28 16:30:43,926 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.2 pTM=0.431 ipTM=0.15 tol=2.07 2024-07-28 16:30:43,927 alphafold2_multimer_v3_model_5_seed_000 took 897.9s (30 recycles) 2024-07-28 16:30:44,660 reranking models by 'multimer' metric 2024-07-28 16:30:47,858 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 16:32:51,058 Relaxation took 126.4s 2024-07-28 16:32:51,058 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55 pTM=0.441 ipTM=0.161 2024-07-28 16:35:01,502 Relaxation took 130.4s 2024-07-28 16:35:01,502 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.9 pTM=0.429 ipTM=0.154 2024-07-28 16:37:25,797 Relaxation took 144.3s 2024-07-28 16:37:25,798 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.2 pTM=0.431 ipTM=0.15 2024-07-28 16:39:40,116 Relaxation took 134.3s 2024-07-28 16:39:40,116 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=54.6 pTM=0.426 ipTM=0.146 2024-07-28 16:42:26,893 Relaxation took 166.8s 2024-07-28 16:42:26,893 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.3 pTM=0.418 ipTM=0.148 2024-07-28 16:42:29,239 Done