2024-07-28 15:49:52,767 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 15:49:53,085 Running on GPU 2024-07-28 15:49:54,121 Found 6 citations for tools or databases 2024-07-28 15:49:54,122 Query 1/1: ZNF394_LZTR1 (length 1401) 2024-07-28 15:49:54,547 Sleeping for 5s. Reason: PENDING 2024-07-28 15:49:59,968 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:50:08,396 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:50:16,833 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:50:22,263 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:50:30,673 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:50:41,097 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:50:48,510 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:50:58,921 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:51:04,346 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:51:14,774 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:51:24,191 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:51:31,622 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:51:38,073 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:51:44,496 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:51:50,959 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:51:57,399 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:52:05,848 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:52:12,280 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:52:17,708 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:52:28,127 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:52:34,541 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:52:40,974 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:52:51,422 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:52:57,838 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:53:05,261 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:53:10,675 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:53:20,108 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:53:29,531 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:53:34,955 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:53:42,378 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:53:48,814 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:53:54,222 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:54:02,625 Sleeping for 7s. Reason: RUNNING 2024-07-28 15:54:12,115 Sleeping for 5s. Reason: PENDING 2024-07-28 15:54:17,554 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:54:26,999 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:54:32,417 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:54:37,836 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:54:46,262 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:54:51,696 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:54:58,127 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:55:08,545 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:55:13,971 Sleeping for 5s. Reason: RUNNING 2024-07-28 15:55:19,420 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:55:28,842 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:55:39,271 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:55:48,708 Sleeping for 9s. Reason: RUNNING 2024-07-28 15:55:58,150 Sleeping for 6s. Reason: RUNNING 2024-07-28 15:56:04,571 Sleeping for 10s. Reason: RUNNING 2024-07-28 15:56:14,996 Sleeping for 8s. Reason: RUNNING 2024-07-28 15:56:27,900 Setting max_seq=508, max_extra_seq=2048 2024-07-28 16:00:40,170 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.2 pTM=0.477 ipTM=0.178 2024-07-28 16:01:33,720 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61 pTM=0.438 ipTM=0.17 tol=8.61 2024-07-28 16:02:27,452 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.8 pTM=0.442 ipTM=0.168 tol=4.54 2024-07-28 16:03:21,150 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.9 pTM=0.459 ipTM=0.168 tol=4.25 2024-07-28 16:04:14,913 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.8 pTM=0.457 ipTM=0.169 tol=2.54 2024-07-28 16:05:08,669 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.7 pTM=0.451 ipTM=0.169 tol=4.9 2024-07-28 16:06:02,446 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.8 pTM=0.457 ipTM=0.171 tol=4.68 2024-07-28 16:06:56,212 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61 pTM=0.466 ipTM=0.171 tol=4.77 2024-07-28 16:07:49,995 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.9 pTM=0.46 ipTM=0.171 tol=2.26 2024-07-28 16:08:43,730 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.8 pTM=0.455 ipTM=0.172 tol=5.86 2024-07-28 16:09:37,473 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.6 pTM=0.46 ipTM=0.172 tol=2.03 2024-07-28 16:10:31,258 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61 pTM=0.467 ipTM=0.173 tol=2.1 2024-07-28 16:11:25,069 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.8 pTM=0.462 ipTM=0.171 tol=2.75 2024-07-28 16:12:18,891 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.6 pTM=0.458 ipTM=0.171 tol=2.06 2024-07-28 16:13:12,692 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.8 pTM=0.461 ipTM=0.171 tol=4.92 2024-07-28 16:14:06,458 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.9 pTM=0.468 ipTM=0.169 tol=5.15 2024-07-28 16:15:00,207 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.8 pTM=0.465 ipTM=0.17 tol=5.05 2024-07-28 16:15:53,985 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.6 pTM=0.454 ipTM=0.17 tol=4.79 2024-07-28 16:16:47,838 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.8 pTM=0.463 ipTM=0.171 tol=1.18 2024-07-28 16:17:41,661 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61 pTM=0.474 ipTM=0.171 tol=5.01 2024-07-28 16:18:35,467 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61 pTM=0.468 ipTM=0.172 tol=1.29 2024-07-28 16:19:29,254 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.8 pTM=0.464 ipTM=0.173 tol=1.55 2024-07-28 16:20:23,038 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.9 pTM=0.468 ipTM=0.172 tol=4.42 2024-07-28 16:21:16,828 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.9 pTM=0.469 ipTM=0.173 tol=4.7 2024-07-28 16:22:10,651 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61 pTM=0.462 ipTM=0.173 tol=3.37 2024-07-28 16:23:04,493 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.8 pTM=0.456 ipTM=0.172 tol=4.04 2024-07-28 16:23:58,337 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.8 pTM=0.463 ipTM=0.173 tol=1.37 2024-07-28 16:24:52,159 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.7 pTM=0.461 ipTM=0.173 tol=4.66 2024-07-28 16:25:46,015 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61 pTM=0.465 ipTM=0.173 tol=5.6 2024-07-28 16:26:39,872 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.9 pTM=0.465 ipTM=0.173 tol=5.75 2024-07-28 16:27:33,679 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.9 pTM=0.464 ipTM=0.171 tol=1.31 2024-07-28 16:27:33,680 alphafold2_multimer_v3_model_1_seed_000 took 1861.6s (30 recycles) 2024-07-28 16:28:28,697 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60 pTM=0.482 ipTM=0.183 2024-07-28 16:29:22,585 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.7 pTM=0.468 ipTM=0.17 tol=9.78 2024-07-28 16:30:16,475 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.8 pTM=0.477 ipTM=0.167 tol=6.11 2024-07-28 16:31:10,386 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.7 pTM=0.495 ipTM=0.168 tol=5.4 2024-07-28 16:32:04,304 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.8 pTM=0.498 ipTM=0.168 tol=2.99 2024-07-28 16:32:58,186 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.2 pTM=0.502 ipTM=0.168 tol=6.36 2024-07-28 16:33:52,074 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.4 pTM=0.506 ipTM=0.17 tol=4.39 2024-07-28 16:34:45,950 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.5 pTM=0.506 ipTM=0.17 tol=3.47 2024-07-28 16:35:39,807 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.3 pTM=0.504 ipTM=0.172 tol=3.55 2024-07-28 16:36:33,704 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.6 pTM=0.507 ipTM=0.169 tol=3.06 2024-07-28 16:37:27,592 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.5 pTM=0.512 ipTM=0.171 tol=5.85 2024-07-28 16:38:21,461 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.9 pTM=0.513 ipTM=0.171 tol=5.72 2024-07-28 16:39:15,341 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.5 pTM=0.515 ipTM=0.171 tol=5.21 2024-07-28 16:40:09,199 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.5 pTM=0.515 ipTM=0.171 tol=3.52 2024-07-28 16:41:03,109 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.8 pTM=0.519 ipTM=0.172 tol=4.4 2024-07-28 16:41:56,974 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.8 pTM=0.52 ipTM=0.171 tol=3.29 2024-07-28 16:42:50,850 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.7 pTM=0.521 ipTM=0.171 tol=3.43 2024-07-28 16:43:44,747 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.7 pTM=0.518 ipTM=0.17 tol=3.06 2024-07-28 16:44:38,637 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.7 pTM=0.523 ipTM=0.171 tol=3.29 2024-07-28 16:45:32,593 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.8 pTM=0.521 ipTM=0.169 tol=3.75 2024-07-28 16:46:26,516 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.8 pTM=0.522 ipTM=0.17 tol=3.77 2024-07-28 16:47:20,432 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.8 pTM=0.52 ipTM=0.171 tol=2.11 2024-07-28 16:48:14,331 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.6 pTM=0.521 ipTM=0.172 tol=2.8 2024-07-28 16:49:08,213 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.7 pTM=0.518 ipTM=0.17 tol=3.05 2024-07-28 16:50:02,127 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.7 pTM=0.517 ipTM=0.169 tol=2.99 2024-07-28 16:50:56,064 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.7 pTM=0.519 ipTM=0.171 tol=2.96 2024-07-28 16:51:49,984 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.7 pTM=0.524 ipTM=0.17 tol=2.65 2024-07-28 16:52:43,879 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.8 pTM=0.521 ipTM=0.17 tol=2.81 2024-07-28 16:53:37,873 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.9 pTM=0.529 ipTM=0.171 tol=2.46 2024-07-28 16:54:31,805 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.8 pTM=0.527 ipTM=0.171 tol=3.04 2024-07-28 16:55:25,732 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.8 pTM=0.525 ipTM=0.171 tol=3.61 2024-07-28 16:55:25,733 alphafold2_multimer_v3_model_2_seed_000 took 1670.9s (30 recycles) 2024-07-28 16:56:21,137 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.8 pTM=0.505 ipTM=0.166 2024-07-28 16:57:15,200 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.2 pTM=0.493 ipTM=0.173 tol=11.3 2024-07-28 16:58:09,254 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.1 pTM=0.5 ipTM=0.178 tol=5.41 2024-07-28 16:59:03,276 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.2 pTM=0.506 ipTM=0.178 tol=2.85 2024-07-28 16:59:57,298 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.9 pTM=0.502 ipTM=0.177 tol=3.45 2024-07-28 17:00:51,313 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.2 pTM=0.511 ipTM=0.178 tol=2.58 2024-07-28 17:01:45,304 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.4 pTM=0.519 ipTM=0.181 tol=2.82 2024-07-28 17:02:39,295 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.5 pTM=0.519 ipTM=0.179 tol=2.55 2024-07-28 17:03:33,297 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.4 pTM=0.512 ipTM=0.181 tol=2.33 2024-07-28 17:04:27,219 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.5 pTM=0.517 ipTM=0.182 tol=2.86 2024-07-28 17:05:21,111 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.3 pTM=0.515 ipTM=0.183 tol=2.74 2024-07-28 17:06:15,041 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.3 pTM=0.513 ipTM=0.183 tol=2.38 2024-07-28 17:07:08,972 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.2 pTM=0.514 ipTM=0.184 tol=2.19 2024-07-28 17:08:03,023 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.3 pTM=0.518 ipTM=0.184 tol=1.96 2024-07-28 17:08:56,986 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.4 pTM=0.517 ipTM=0.185 tol=1.72 2024-07-28 17:09:50,946 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.4 pTM=0.519 ipTM=0.184 tol=1.52 2024-07-28 17:10:44,920 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.2 pTM=0.514 ipTM=0.185 tol=1.2 2024-07-28 17:11:38,924 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.4 pTM=0.526 ipTM=0.184 tol=1.14 2024-07-28 17:12:32,891 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.5 pTM=0.531 ipTM=0.185 tol=1.09 2024-07-28 17:13:26,880 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.5 pTM=0.532 ipTM=0.183 tol=1.17 2024-07-28 17:14:20,877 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.8 pTM=0.534 ipTM=0.186 tol=1.15 2024-07-28 17:15:14,848 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.6 pTM=0.532 ipTM=0.184 tol=1.27 2024-07-28 17:16:08,818 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.8 pTM=0.534 ipTM=0.185 tol=1.25 2024-07-28 17:17:02,817 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.8 pTM=0.531 ipTM=0.182 tol=1.11 2024-07-28 17:17:56,806 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.9 pTM=0.531 ipTM=0.183 tol=1.23 2024-07-28 17:18:50,787 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.7 pTM=0.531 ipTM=0.183 tol=1.15 2024-07-28 17:19:44,799 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62 pTM=0.538 ipTM=0.191 tol=1.17 2024-07-28 17:20:38,794 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62 pTM=0.541 ipTM=0.183 tol=1.29 2024-07-28 17:21:32,785 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.2 pTM=0.549 ipTM=0.19 tol=1.59 2024-07-28 17:22:26,784 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.2 pTM=0.549 ipTM=0.182 tol=1.92 2024-07-28 17:23:20,765 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.2 pTM=0.551 ipTM=0.187 tol=1.65 2024-07-28 17:23:20,767 alphafold2_multimer_v3_model_3_seed_000 took 1673.9s (30 recycles) 2024-07-28 17:24:16,090 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.3 pTM=0.474 ipTM=0.162 2024-07-28 17:25:10,091 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.7 pTM=0.484 ipTM=0.17 tol=16.9 2024-07-28 17:26:04,064 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62.2 pTM=0.516 ipTM=0.185 tol=10.9 2024-07-28 17:26:58,029 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.9 pTM=0.502 ipTM=0.174 tol=11.5 2024-07-28 17:27:52,071 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.1 pTM=0.501 ipTM=0.169 tol=10.2 2024-07-28 17:28:46,041 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.1 pTM=0.511 ipTM=0.172 tol=10.5 2024-07-28 17:29:40,067 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.9 pTM=0.516 ipTM=0.164 tol=9.05 2024-07-28 17:30:34,095 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.5 pTM=0.512 ipTM=0.172 tol=6.8 2024-07-28 17:31:28,165 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.7 pTM=0.517 ipTM=0.168 tol=5.01 2024-07-28 17:32:22,162 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62 pTM=0.523 ipTM=0.171 tol=6.39 2024-07-28 17:33:16,135 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.8 pTM=0.525 ipTM=0.169 tol=4.5 2024-07-28 17:34:10,124 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.7 pTM=0.522 ipTM=0.171 tol=3.12 2024-07-28 17:35:04,107 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.9 pTM=0.522 ipTM=0.17 tol=3.96 2024-07-28 17:35:58,087 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.8 pTM=0.524 ipTM=0.174 tol=3.95 2024-07-28 17:36:52,122 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.5 pTM=0.527 ipTM=0.169 tol=7.66 2024-07-28 17:37:46,111 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.7 pTM=0.525 ipTM=0.17 tol=7.21 2024-07-28 17:38:40,132 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.8 pTM=0.522 ipTM=0.167 tol=3.14 2024-07-28 17:39:34,167 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.7 pTM=0.526 ipTM=0.172 tol=5.26 2024-07-28 17:40:28,214 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.8 pTM=0.531 ipTM=0.169 tol=5.93 2024-07-28 17:41:22,265 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.1 pTM=0.536 ipTM=0.172 tol=3.38 2024-07-28 17:42:16,299 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62 pTM=0.531 ipTM=0.172 tol=3.17 2024-07-28 17:43:10,313 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.2 pTM=0.539 ipTM=0.173 tol=3.67 2024-07-28 17:44:04,301 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.1 pTM=0.539 ipTM=0.171 tol=3.48 2024-07-28 17:44:58,354 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.2 pTM=0.544 ipTM=0.168 tol=4.77 2024-07-28 17:45:52,343 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.2 pTM=0.541 ipTM=0.173 tol=4.59 2024-07-28 17:46:46,365 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.1 pTM=0.542 ipTM=0.169 tol=4.09 2024-07-28 17:47:40,346 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.4 pTM=0.547 ipTM=0.173 tol=4.85 2024-07-28 17:48:34,383 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.4 pTM=0.55 ipTM=0.168 tol=3.46 2024-07-28 17:49:28,400 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.3 pTM=0.552 ipTM=0.172 tol=4.21 2024-07-28 17:50:22,434 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.2 pTM=0.55 ipTM=0.169 tol=4.45 2024-07-28 17:51:16,448 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.3 pTM=0.551 ipTM=0.173 tol=6.29 2024-07-28 17:51:16,449 alphafold2_multimer_v3_model_4_seed_000 took 1674.5s (30 recycles) 2024-07-28 17:52:11,825 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.2 pTM=0.482 ipTM=0.172 2024-07-28 17:53:05,912 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.5 pTM=0.472 ipTM=0.169 tol=11.5 2024-07-28 17:53:59,914 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.3 pTM=0.481 ipTM=0.171 tol=10.3 2024-07-28 17:54:53,922 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.3 pTM=0.491 ipTM=0.173 tol=4.1 2024-07-28 17:55:47,926 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=60.1 pTM=0.489 ipTM=0.173 tol=3.77 2024-07-28 17:56:41,947 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.1 pTM=0.484 ipTM=0.172 tol=4.2 2024-07-28 17:57:35,991 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=60.4 pTM=0.491 ipTM=0.173 tol=3.45 2024-07-28 17:58:30,057 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.5 pTM=0.489 ipTM=0.174 tol=3.92 2024-07-28 17:59:24,082 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=60.6 pTM=0.482 ipTM=0.173 tol=7.09 2024-07-28 18:00:18,108 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.7 pTM=0.488 ipTM=0.175 tol=2.95 2024-07-28 18:01:12,122 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=60.5 pTM=0.486 ipTM=0.175 tol=2.5 2024-07-28 18:02:06,117 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.4 pTM=0.486 ipTM=0.173 tol=6.66 2024-07-28 18:03:00,172 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=60.5 pTM=0.486 ipTM=0.176 tol=6.63 2024-07-28 18:03:54,254 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.3 pTM=0.487 ipTM=0.172 tol=4.83 2024-07-28 18:04:48,303 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=60.6 pTM=0.494 ipTM=0.176 tol=4.74 2024-07-28 18:05:42,345 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.5 pTM=0.494 ipTM=0.176 tol=7.6 2024-07-28 18:06:36,375 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.8 pTM=0.506 ipTM=0.182 tol=3.33 2024-07-28 18:07:30,413 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.8 pTM=0.507 ipTM=0.183 tol=7.57 2024-07-28 18:08:24,442 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61 pTM=0.51 ipTM=0.183 tol=6.81 2024-07-28 18:09:18,463 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61 pTM=0.517 ipTM=0.177 tol=6.29 2024-07-28 18:10:12,466 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.2 pTM=0.516 ipTM=0.179 tol=3.72 2024-07-28 18:11:06,452 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.1 pTM=0.522 ipTM=0.177 tol=1.92 2024-07-28 18:12:00,392 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.2 pTM=0.52 ipTM=0.177 tol=1.68 2024-07-28 18:12:54,379 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.3 pTM=0.523 ipTM=0.186 tol=5.45 2024-07-28 18:13:48,387 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.2 pTM=0.52 ipTM=0.185 tol=6.25 2024-07-28 18:14:42,417 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.1 pTM=0.522 ipTM=0.183 tol=2.79 2024-07-28 18:15:36,492 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.3 pTM=0.526 ipTM=0.186 tol=2.11 2024-07-28 18:16:30,525 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.4 pTM=0.528 ipTM=0.18 tol=2.13 2024-07-28 18:17:24,560 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.5 pTM=0.531 ipTM=0.182 tol=1.84 2024-07-28 18:18:18,585 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.5 pTM=0.532 ipTM=0.185 tol=5.7 2024-07-28 18:19:12,609 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.4 pTM=0.531 ipTM=0.182 tol=6.29 2024-07-28 18:19:12,611 alphafold2_multimer_v3_model_5_seed_000 took 1675.0s (30 recycles) 2024-07-28 18:19:13,770 reranking models by 'multimer' metric 2024-07-28 18:19:17,321 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 18:22:55,794 Relaxation took 222.0s 2024-07-28 18:22:55,794 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.2 pTM=0.551 ipTM=0.187 2024-07-28 18:26:12,080 Relaxation took 196.3s 2024-07-28 18:26:12,080 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.4 pTM=0.531 ipTM=0.182 2024-07-28 18:47:39,392 Relaxation took 1287.3s 2024-07-28 18:47:39,392 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.3 pTM=0.551 ipTM=0.173 2024-07-28 18:50:50,543 Relaxation took 191.1s 2024-07-28 18:50:50,543 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.8 pTM=0.525 ipTM=0.171 2024-07-28 18:53:44,914 Relaxation took 174.4s 2024-07-28 18:53:44,914 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.9 pTM=0.464 ipTM=0.171 2024-07-28 18:53:47,940 Done