2024-07-28 15:50:46,115 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 15:50:46,426 Running on GPU
2024-07-28 15:50:47,986 Found 6 citations for tools or databases
2024-07-28 15:50:47,987 Query 1/1: ZNF394_RAB40C (length 842)
2024-07-28 15:50:48,422 Sleeping for 9s. Reason: PENDING
2024-07-28 15:50:57,873 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:51:03,306 Sleeping for 8s. Reason: RUNNING
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2024-07-28 15:51:51,915 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:51:57,338 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:52:05,760 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:52:14,189 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:52:23,630 Sleeping for 7s. Reason: RUNNING
2024-07-28 15:52:31,069 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:52:40,491 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:52:45,916 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:52:54,331 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:52:59,771 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:53:05,211 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:53:14,621 Sleeping for 6s. Reason: RUNNING
2024-07-28 15:53:21,050 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:53:26,468 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:53:31,871 Sleeping for 6s. Reason: RUNNING
2024-07-28 15:53:38,304 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:53:46,717 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:53:56,142 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:54:01,575 Sleeping for 10s. Reason: RUNNING
2024-07-28 15:54:11,994 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:54:20,406 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:54:31,088 Sleeping for 7s. Reason: PENDING
2024-07-28 15:54:38,508 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:54:47,921 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:54:56,330 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:55:05,739 Sleeping for 6s. Reason: RUNNING
2024-07-28 15:55:12,146 Sleeping for 7s. Reason: RUNNING
2024-07-28 15:55:19,552 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:55:27,996 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:55:37,454 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:55:45,884 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:55:55,311 Sleeping for 9s. Reason: RUNNING
2024-07-28 15:56:04,747 Sleeping for 8s. Reason: RUNNING
2024-07-28 15:56:13,171 Sleeping for 5s. Reason: RUNNING
2024-07-28 15:56:22,644 Setting max_seq=508, max_extra_seq=2048
2024-07-28 15:59:27,704 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.7 pTM=0.313 ipTM=0.199
2024-07-28 15:59:42,437 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.8 pTM=0.298 ipTM=0.162 tol=8.75
2024-07-28 15:59:57,219 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=46.8 pTM=0.296 ipTM=0.162 tol=5.52
2024-07-28 16:00:12,026 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.5 pTM=0.295 ipTM=0.159 tol=4.84
2024-07-28 16:00:26,840 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.7 pTM=0.297 ipTM=0.156 tol=6.51
2024-07-28 16:00:41,683 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.7 pTM=0.297 ipTM=0.152 tol=5.14
2024-07-28 16:00:56,517 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.5 pTM=0.297 ipTM=0.148 tol=2.38
2024-07-28 16:01:11,360 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.3 pTM=0.297 ipTM=0.148 tol=3.69
2024-07-28 16:01:26,209 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.4 pTM=0.296 ipTM=0.146 tol=3.78
2024-07-28 16:01:41,066 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.6 pTM=0.296 ipTM=0.147 tol=1.95
2024-07-28 16:01:55,932 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.5 pTM=0.295 ipTM=0.149 tol=3.56
2024-07-28 16:02:10,809 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.4 pTM=0.296 ipTM=0.149 tol=3.99
2024-07-28 16:02:25,690 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.2 pTM=0.296 ipTM=0.147 tol=4.29
2024-07-28 16:02:40,571 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.3 pTM=0.296 ipTM=0.148 tol=4
2024-07-28 16:02:55,458 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.2 pTM=0.297 ipTM=0.149 tol=3
2024-07-28 16:03:10,344 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.8 pTM=0.297 ipTM=0.147 tol=2.8
2024-07-28 16:03:25,242 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.2 pTM=0.299 ipTM=0.152 tol=2.58
2024-07-28 16:03:40,139 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.5 pTM=0.298 ipTM=0.148 tol=4.29
2024-07-28 16:03:55,040 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.4 pTM=0.299 ipTM=0.148 tol=4.07
2024-07-28 16:04:09,941 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.2 pTM=0.297 ipTM=0.147 tol=5.27
2024-07-28 16:04:24,849 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46.1 pTM=0.299 ipTM=0.149 tol=4.42
2024-07-28 16:04:39,758 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.3 pTM=0.297 ipTM=0.147 tol=4.66
2024-07-28 16:04:54,672 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.3 pTM=0.297 ipTM=0.151 tol=2.37
2024-07-28 16:05:09,566 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=46.6 pTM=0.296 ipTM=0.145 tol=2.76
2024-07-28 16:05:24,479 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.2 pTM=0.297 ipTM=0.149 tol=4.53
2024-07-28 16:05:39,394 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.4 pTM=0.297 ipTM=0.147 tol=2.38
2024-07-28 16:05:54,309 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.4 pTM=0.297 ipTM=0.147 tol=5
2024-07-28 16:06:09,213 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.4 pTM=0.297 ipTM=0.146 tol=2.83
2024-07-28 16:06:24,121 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.1 pTM=0.297 ipTM=0.147 tol=3.89
2024-07-28 16:06:39,037 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.2 pTM=0.296 ipTM=0.149 tol=4.52
2024-07-28 16:06:53,939 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=45.9 pTM=0.297 ipTM=0.152 tol=4.94
2024-07-28 16:06:53,939 alphafold2_multimer_v3_model_1_seed_000 took 627.4s (30 recycles)
2024-07-28 16:07:09,261 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=47.1 pTM=0.353 ipTM=0.197
2024-07-28 16:07:24,143 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.7 pTM=0.348 ipTM=0.267 tol=10.4
2024-07-28 16:07:39,053 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.3 pTM=0.325 ipTM=0.203 tol=7.61
2024-07-28 16:07:53,962 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.1 pTM=0.316 ipTM=0.191 tol=8.37
2024-07-28 16:08:08,881 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46.8 pTM=0.309 ipTM=0.172 tol=7.02
2024-07-28 16:08:23,808 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.1 pTM=0.309 ipTM=0.156 tol=3.73
2024-07-28 16:08:38,733 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.8 pTM=0.307 ipTM=0.15 tol=3.93
2024-07-28 16:08:53,667 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=46.4 pTM=0.305 ipTM=0.152 tol=4.24
2024-07-28 16:09:08,604 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.6 pTM=0.307 ipTM=0.157 tol=3.03
2024-07-28 16:09:23,537 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.8 pTM=0.306 ipTM=0.155 tol=3.11
2024-07-28 16:09:38,479 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.6 pTM=0.306 ipTM=0.154 tol=3.03
2024-07-28 16:09:53,404 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.3 pTM=0.308 ipTM=0.151 tol=2.8
2024-07-28 16:10:08,338 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=46.2 pTM=0.306 ipTM=0.149 tol=2.51
2024-07-28 16:10:23,275 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46.9 pTM=0.308 ipTM=0.151 tol=2.31
2024-07-28 16:10:38,199 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.5 pTM=0.307 ipTM=0.151 tol=2.72
2024-07-28 16:10:53,127 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=46.6 pTM=0.305 ipTM=0.149 tol=2.41
2024-07-28 16:11:08,053 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=46.4 pTM=0.307 ipTM=0.15 tol=2.12
2024-07-28 16:11:22,979 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.7 pTM=0.309 ipTM=0.156 tol=2.04
2024-07-28 16:11:37,898 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46.7 pTM=0.311 ipTM=0.155 tol=3.12
2024-07-28 16:11:52,830 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.2 pTM=0.307 ipTM=0.157 tol=2.96
2024-07-28 16:12:07,753 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=46.1 pTM=0.306 ipTM=0.151 tol=2.2
2024-07-28 16:12:22,680 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.5 pTM=0.309 ipTM=0.15 tol=2.3
2024-07-28 16:12:37,590 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46.1 pTM=0.305 ipTM=0.15 tol=2.9
2024-07-28 16:12:52,507 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=45.8 pTM=0.304 ipTM=0.148 tol=2.04
2024-07-28 16:13:07,429 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=46 pTM=0.304 ipTM=0.15 tol=2.44
2024-07-28 16:13:22,354 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=45.9 pTM=0.308 ipTM=0.148 tol=3.37
2024-07-28 16:13:37,272 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=45.7 pTM=0.303 ipTM=0.151 tol=3.5
2024-07-28 16:13:52,193 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=45.8 pTM=0.306 ipTM=0.155 tol=5.69
2024-07-28 16:14:07,111 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=45.4 pTM=0.303 ipTM=0.154 tol=5.35
2024-07-28 16:14:22,029 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=45.3 pTM=0.302 ipTM=0.164 tol=5.01
2024-07-28 16:14:36,955 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.1 pTM=0.304 ipTM=0.156 tol=5.4
2024-07-28 16:14:36,955 alphafold2_multimer_v3_model_2_seed_000 took 462.6s (30 recycles)
2024-07-28 16:14:52,388 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.2 pTM=0.302 ipTM=0.22
2024-07-28 16:15:07,391 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=45.8 pTM=0.291 ipTM=0.178 tol=14.5
2024-07-28 16:15:22,387 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45.6 pTM=0.298 ipTM=0.19 tol=7.89
2024-07-28 16:15:37,406 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=45.3 pTM=0.287 ipTM=0.157 tol=12
2024-07-28 16:15:52,434 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.2 pTM=0.289 ipTM=0.156 tol=6.31
2024-07-28 16:16:07,450 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.2 pTM=0.288 ipTM=0.153 tol=4.95
2024-07-28 16:16:22,450 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.3 pTM=0.291 ipTM=0.16 tol=3.95
2024-07-28 16:16:37,451 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45.1 pTM=0.288 ipTM=0.152 tol=3.73
2024-07-28 16:16:52,447 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.5 pTM=0.291 ipTM=0.164 tol=3.54
2024-07-28 16:17:07,451 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=44.9 pTM=0.289 ipTM=0.152 tol=5.78
2024-07-28 16:17:22,446 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.1 pTM=0.291 ipTM=0.169 tol=6.63
2024-07-28 16:17:37,444 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=44.5 pTM=0.29 ipTM=0.153 tol=6.24
2024-07-28 16:17:52,445 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.1 pTM=0.295 ipTM=0.179 tol=5.32
2024-07-28 16:18:07,454 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.1 pTM=0.288 ipTM=0.156 tol=4.06
2024-07-28 16:18:22,451 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.5 pTM=0.294 ipTM=0.183 tol=5.13
2024-07-28 16:18:37,455 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=44.9 pTM=0.288 ipTM=0.152 tol=6.56
2024-07-28 16:18:52,455 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.1 pTM=0.292 ipTM=0.175 tol=4.4
2024-07-28 16:19:07,451 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=44.8 pTM=0.288 ipTM=0.156 tol=5.14
2024-07-28 16:19:22,445 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=44.8 pTM=0.29 ipTM=0.168 tol=4.89
2024-07-28 16:19:37,438 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=44.2 pTM=0.289 ipTM=0.155 tol=6.12
2024-07-28 16:19:52,434 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=44.8 pTM=0.292 ipTM=0.167 tol=4.38
2024-07-28 16:20:07,442 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=44.5 pTM=0.289 ipTM=0.154 tol=3.96
2024-07-28 16:20:22,442 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=44.9 pTM=0.29 ipTM=0.167 tol=5.19
2024-07-28 16:20:37,459 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=44.6 pTM=0.286 ipTM=0.151 tol=7.55
2024-07-28 16:20:52,460 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=44.9 pTM=0.29 ipTM=0.164 tol=4.9
2024-07-28 16:21:07,472 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=44.4 pTM=0.288 ipTM=0.152 tol=6.2
2024-07-28 16:21:22,476 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=44.9 pTM=0.292 ipTM=0.166 tol=5.57
2024-07-28 16:21:37,488 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=44.8 pTM=0.289 ipTM=0.153 tol=3.78
2024-07-28 16:21:52,499 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45 pTM=0.293 ipTM=0.173 tol=6.02
2024-07-28 16:22:07,519 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=44.6 pTM=0.288 ipTM=0.154 tol=5.95
2024-07-28 16:22:22,538 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.8 pTM=0.294 ipTM=0.183 tol=6.97
2024-07-28 16:22:22,538 alphafold2_multimer_v3_model_3_seed_000 took 465.1s (30 recycles)
2024-07-28 16:22:37,904 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.5 pTM=0.297 ipTM=0.208
2024-07-28 16:22:52,838 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47 pTM=0.302 ipTM=0.206 tol=11.3
2024-07-28 16:23:07,794 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.9 pTM=0.333 ipTM=0.186 tol=8.36
2024-07-28 16:23:22,746 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.5 pTM=0.319 ipTM=0.173 tol=5.49
2024-07-28 16:23:37,694 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48 pTM=0.322 ipTM=0.204 tol=6.09
2024-07-28 16:23:52,654 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.2 pTM=0.314 ipTM=0.168 tol=3.7
2024-07-28 16:24:07,602 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.7 pTM=0.313 ipTM=0.19 tol=4.1
2024-07-28 16:24:22,547 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.9 pTM=0.311 ipTM=0.171 tol=3.98
2024-07-28 16:24:37,488 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.8 pTM=0.314 ipTM=0.186 tol=3.46
2024-07-28 16:24:52,440 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.8 pTM=0.312 ipTM=0.161 tol=2.72
2024-07-28 16:25:07,377 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.4 pTM=0.319 ipTM=0.194 tol=4.09
2024-07-28 16:25:22,331 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47 pTM=0.313 ipTM=0.173 tol=7.29
2024-07-28 16:25:37,266 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.1 pTM=0.315 ipTM=0.203 tol=4.86
2024-07-28 16:25:52,217 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47 pTM=0.317 ipTM=0.171 tol=5.57
2024-07-28 16:26:07,157 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.9 pTM=0.326 ipTM=0.197 tol=5.23
2024-07-28 16:26:22,104 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.3 pTM=0.318 ipTM=0.179 tol=5.88
2024-07-28 16:26:37,040 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47 pTM=0.325 ipTM=0.199 tol=6.2
2024-07-28 16:26:51,978 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.6 pTM=0.315 ipTM=0.173 tol=5.65
2024-07-28 16:27:06,905 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.6 pTM=0.328 ipTM=0.202 tol=8
2024-07-28 16:27:21,851 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.8 pTM=0.314 ipTM=0.166 tol=5.51
2024-07-28 16:27:36,788 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.8 pTM=0.331 ipTM=0.226 tol=5.62
2024-07-28 16:27:51,736 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.8 pTM=0.312 ipTM=0.168 tol=6.42
2024-07-28 16:28:06,681 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.6 pTM=0.321 ipTM=0.188 tol=5.5
2024-07-28 16:28:21,642 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.8 pTM=0.312 ipTM=0.157 tol=4.18
2024-07-28 16:28:36,599 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.9 pTM=0.317 ipTM=0.183 tol=4.68
2024-07-28 16:28:51,563 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47 pTM=0.313 ipTM=0.162 tol=6.16
2024-07-28 16:29:06,512 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.6 pTM=0.316 ipTM=0.182 tol=4.61
2024-07-28 16:29:21,464 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.9 pTM=0.313 ipTM=0.162 tol=5.65
2024-07-28 16:29:36,406 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.8 pTM=0.321 ipTM=0.19 tol=6.16
2024-07-28 16:29:51,361 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.2 pTM=0.316 ipTM=0.166 tol=6.59
2024-07-28 16:30:06,277 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.2 pTM=0.328 ipTM=0.22 tol=6.66
2024-07-28 16:30:06,278 alphafold2_multimer_v3_model_4_seed_000 took 463.3s (30 recycles)
2024-07-28 16:30:21,709 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.9 pTM=0.34 ipTM=0.271
2024-07-28 16:30:36,676 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.1 pTM=0.326 ipTM=0.185 tol=11.5
2024-07-28 16:30:51,685 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.8 pTM=0.316 ipTM=0.187 tol=11.8
2024-07-28 16:31:06,657 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.2 pTM=0.31 ipTM=0.164 tol=9.42
2024-07-28 16:31:21,638 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=46.8 pTM=0.304 ipTM=0.174 tol=8.55
2024-07-28 16:31:36,625 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47 pTM=0.304 ipTM=0.165 tol=5.4
2024-07-28 16:31:51,606 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=46.1 pTM=0.297 ipTM=0.172 tol=5.66
2024-07-28 16:32:06,606 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=46.3 pTM=0.295 ipTM=0.161 tol=4.34
2024-07-28 16:32:21,601 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=46.5 pTM=0.296 ipTM=0.162 tol=5.7
2024-07-28 16:32:36,604 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=46.6 pTM=0.295 ipTM=0.163 tol=7.79
2024-07-28 16:32:51,611 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=46.3 pTM=0.295 ipTM=0.162 tol=7.76
2024-07-28 16:33:06,610 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=46 pTM=0.293 ipTM=0.166 tol=5.79
2024-07-28 16:33:21,622 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.5 pTM=0.294 ipTM=0.153 tol=6.12
2024-07-28 16:33:36,632 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=46.2 pTM=0.298 ipTM=0.164 tol=7.61
2024-07-28 16:33:51,630 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.5 pTM=0.309 ipTM=0.166 tol=8.42
2024-07-28 16:34:06,628 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=46.5 pTM=0.298 ipTM=0.167 tol=4.3
2024-07-28 16:34:21,656 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.2 pTM=0.294 ipTM=0.161 tol=6.07
2024-07-28 16:34:36,677 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=45.9 pTM=0.294 ipTM=0.167 tol=8.77
2024-07-28 16:34:51,689 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=46.2 pTM=0.294 ipTM=0.154 tol=7.54
2024-07-28 16:35:06,716 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.8 pTM=0.299 ipTM=0.168 tol=7.1
2024-07-28 16:35:21,712 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.8 pTM=0.298 ipTM=0.167 tol=5.63
2024-07-28 16:35:36,728 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=45.6 pTM=0.295 ipTM=0.169 tol=8.27
2024-07-28 16:35:51,743 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=46.1 pTM=0.295 ipTM=0.158 tol=7.64
2024-07-28 16:36:06,743 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=46.1 pTM=0.296 ipTM=0.162 tol=8.21
2024-07-28 16:36:21,758 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.9 pTM=0.295 ipTM=0.163 tol=4.65
2024-07-28 16:36:36,775 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.9 pTM=0.294 ipTM=0.168 tol=5.64
2024-07-28 16:36:51,775 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.8 pTM=0.294 ipTM=0.157 tol=8.24
2024-07-28 16:37:06,786 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.8 pTM=0.301 ipTM=0.165 tol=4.69
2024-07-28 16:37:21,798 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.6 pTM=0.296 ipTM=0.16 tol=6.5
2024-07-28 16:37:36,821 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=45.6 pTM=0.292 ipTM=0.171 tol=7.12
2024-07-28 16:37:51,840 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=45.8 pTM=0.29 ipTM=0.151 tol=5.76
2024-07-28 16:37:51,841 alphafold2_multimer_v3_model_5_seed_000 took 465.1s (30 recycles)
2024-07-28 16:37:52,293 reranking models by 'multimer' metric
2024-07-28 16:37:53,284 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 16:39:39,044 Relaxation took 106.8s
2024-07-28 16:39:39,044 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.2 pTM=0.328 ipTM=0.22
2024-07-28 16:41:26,243 Relaxation took 107.2s
2024-07-28 16:41:26,243 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.8 pTM=0.294 ipTM=0.183
2024-07-28 16:43:12,538 Relaxation took 106.3s
2024-07-28 16:43:12,538 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.1 pTM=0.304 ipTM=0.156
2024-07-28 16:45:09,787 Relaxation took 117.2s
2024-07-28 16:45:09,787 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=45.9 pTM=0.297 ipTM=0.152
2024-07-28 16:46:31,420 Relaxation took 81.6s
2024-07-28 16:46:31,420 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=45.8 pTM=0.29 ipTM=0.151
2024-07-28 16:46:33,007 Done