2024-07-28 18:54:20,775 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 18:54:21,094 Running on GPU 2024-07-28 18:54:24,408 Found 6 citations for tools or databases 2024-07-28 18:54:24,409 Query 1/1: ZNF557_FBXO2 (length 727) 2024-07-28 18:54:24,890 Sleeping for 6s. Reason: PENDING 2024-07-28 18:54:31,321 Sleeping for 9s. Reason: RUNNING 2024-07-28 18:54:40,773 Sleeping for 9s. Reason: RUNNING 2024-07-28 18:54:50,202 Sleeping for 9s. Reason: RUNNING 2024-07-28 18:54:59,631 Sleeping for 10s. Reason: RUNNING 2024-07-28 18:55:10,063 Sleeping for 5s. Reason: RUNNING 2024-07-28 18:55:15,467 Sleeping for 9s. Reason: RUNNING 2024-07-28 18:55:24,908 Sleeping for 6s. Reason: RUNNING 2024-07-28 18:55:31,350 Sleeping for 8s. Reason: RUNNING 2024-07-28 18:55:39,757 Sleeping for 8s. Reason: RUNNING 2024-07-28 18:55:48,181 Sleeping for 7s. Reason: RUNNING 2024-07-28 18:55:55,604 Sleeping for 6s. Reason: RUNNING 2024-07-28 18:56:02,016 Sleeping for 8s. Reason: RUNNING 2024-07-28 18:56:10,465 Sleeping for 6s. Reason: RUNNING 2024-07-28 18:56:16,875 Sleeping for 5s. Reason: RUNNING 2024-07-28 18:56:22,294 Sleeping for 9s. Reason: RUNNING 2024-07-28 18:56:33,586 Sleeping for 6s. Reason: PENDING 2024-07-28 18:56:40,033 Sleeping for 9s. Reason: RUNNING 2024-07-28 18:56:49,472 Sleeping for 6s. Reason: RUNNING 2024-07-28 18:56:55,888 Sleeping for 8s. Reason: RUNNING 2024-07-28 18:57:04,305 Sleeping for 8s. Reason: RUNNING 2024-07-28 18:57:12,727 Sleeping for 6s. Reason: RUNNING 2024-07-28 18:57:19,183 Sleeping for 10s. Reason: RUNNING 2024-07-28 18:57:29,621 Sleeping for 7s. Reason: RUNNING 2024-07-28 18:57:40,632 Setting max_seq=508, max_extra_seq=2048 2024-07-28 19:00:51,059 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.8 pTM=0.392 ipTM=0.137 2024-07-28 19:01:01,517 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=52.7 pTM=0.395 ipTM=0.142 tol=7.66 2024-07-28 19:01:11,999 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.9 pTM=0.398 ipTM=0.139 tol=6.83 2024-07-28 19:01:22,504 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.1 pTM=0.398 ipTM=0.139 tol=8 2024-07-28 19:01:33,009 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.3 pTM=0.399 ipTM=0.141 tol=5.17 2024-07-28 19:01:43,534 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.4 pTM=0.4 ipTM=0.141 tol=2.27 2024-07-28 19:01:54,092 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.3 pTM=0.399 ipTM=0.14 tol=3.29 2024-07-28 19:02:04,649 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54 pTM=0.397 ipTM=0.14 tol=2.13 2024-07-28 19:02:15,223 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.7 pTM=0.401 ipTM=0.143 tol=2.31 2024-07-28 19:02:25,798 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.4 pTM=0.4 ipTM=0.147 tol=13.8 2024-07-28 19:02:36,389 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.5 pTM=0.404 ipTM=0.173 tol=3.72 2024-07-28 19:02:46,979 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.7 pTM=0.402 ipTM=0.164 tol=2.24 2024-07-28 19:02:57,569 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.1 pTM=0.399 ipTM=0.161 tol=1.97 2024-07-28 19:03:08,196 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.7 pTM=0.402 ipTM=0.165 tol=2.39 2024-07-28 19:03:18,813 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.3 pTM=0.404 ipTM=0.174 tol=4.25 2024-07-28 19:03:29,426 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54.5 pTM=0.405 ipTM=0.179 tol=2.74 2024-07-28 19:03:40,057 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.4 pTM=0.405 ipTM=0.179 tol=3.04 2024-07-28 19:03:50,687 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.3 pTM=0.406 ipTM=0.179 tol=2.64 2024-07-28 19:04:01,297 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.5 pTM=0.406 ipTM=0.176 tol=3.66 2024-07-28 19:04:11,921 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=54.3 pTM=0.404 ipTM=0.183 tol=3.3 2024-07-28 19:04:22,541 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=54.4 pTM=0.405 ipTM=0.178 tol=2.14 2024-07-28 19:04:33,174 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=54.3 pTM=0.406 ipTM=0.177 tol=2.04 2024-07-28 19:04:43,801 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54.2 pTM=0.406 ipTM=0.19 tol=3.32 2024-07-28 19:04:54,448 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=54.1 pTM=0.405 ipTM=0.182 tol=2.21 2024-07-28 19:05:05,093 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=54.1 pTM=0.405 ipTM=0.188 tol=3.35 2024-07-28 19:05:15,723 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.9 pTM=0.405 ipTM=0.178 tol=2.71 2024-07-28 19:05:26,350 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.2 pTM=0.404 ipTM=0.178 tol=1.83 2024-07-28 19:05:36,972 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=54.1 pTM=0.404 ipTM=0.173 tol=3.17 2024-07-28 19:05:47,615 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.6 pTM=0.404 ipTM=0.182 tol=2.66 2024-07-28 19:05:58,250 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.5 pTM=0.409 ipTM=0.202 tol=3.01 2024-07-28 19:06:08,880 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.5 pTM=0.403 ipTM=0.192 tol=3.03 2024-07-28 19:06:08,881 alphafold2_multimer_v3_model_1_seed_000 took 503.4s (30 recycles) 2024-07-28 19:06:19,841 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.2 pTM=0.387 ipTM=0.14 2024-07-28 19:06:30,488 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.7 pTM=0.382 ipTM=0.157 tol=10.2 2024-07-28 19:06:41,141 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53 pTM=0.387 ipTM=0.152 tol=6.91 2024-07-28 19:06:51,788 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.7 pTM=0.384 ipTM=0.152 tol=6.06 2024-07-28 19:07:02,435 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.7 pTM=0.384 ipTM=0.148 tol=4.67 2024-07-28 19:07:13,096 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.9 pTM=0.384 ipTM=0.148 tol=2.74 2024-07-28 19:07:23,746 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.1 pTM=0.385 ipTM=0.152 tol=4.93 2024-07-28 19:07:34,383 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.3 pTM=0.385 ipTM=0.151 tol=1.89 2024-07-28 19:07:45,019 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.4 pTM=0.386 ipTM=0.153 tol=4.39 2024-07-28 19:07:55,652 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.2 pTM=0.384 ipTM=0.151 tol=2.47 2024-07-28 19:08:06,286 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.2 pTM=0.385 ipTM=0.15 tol=1.59 2024-07-28 19:08:16,904 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.5 pTM=0.386 ipTM=0.153 tol=2.11 2024-07-28 19:08:27,561 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.5 pTM=0.386 ipTM=0.152 tol=3.35 2024-07-28 19:08:38,203 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.5 pTM=0.387 ipTM=0.152 tol=1.89 2024-07-28 19:08:48,840 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.6 pTM=0.387 ipTM=0.154 tol=0.988 2024-07-28 19:08:59,494 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.5 pTM=0.385 ipTM=0.154 tol=1.44 2024-07-28 19:09:10,147 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.9 pTM=0.387 ipTM=0.158 tol=1.02 2024-07-28 19:09:20,802 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.8 pTM=0.388 ipTM=0.153 tol=1.18 2024-07-28 19:09:31,446 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.8 pTM=0.386 ipTM=0.154 tol=1.76 2024-07-28 19:09:42,084 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.8 pTM=0.386 ipTM=0.153 tol=2.34 2024-07-28 19:09:52,734 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.6 pTM=0.385 ipTM=0.151 tol=2.38 2024-07-28 19:10:03,391 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.3 pTM=0.386 ipTM=0.15 tol=1.78 2024-07-28 19:10:14,024 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.5 pTM=0.384 ipTM=0.153 tol=3.73 2024-07-28 19:10:24,675 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.4 pTM=0.385 ipTM=0.149 tol=2.16 2024-07-28 19:10:35,320 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.2 pTM=0.383 ipTM=0.148 tol=1.71 2024-07-28 19:10:45,961 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.2 pTM=0.383 ipTM=0.147 tol=2.16 2024-07-28 19:10:56,604 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.3 pTM=0.384 ipTM=0.149 tol=5.91 2024-07-28 19:11:07,256 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.5 pTM=0.384 ipTM=0.149 tol=3.95 2024-07-28 19:11:17,897 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.3 pTM=0.382 ipTM=0.149 tol=2.1 2024-07-28 19:11:28,540 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.2 pTM=0.384 ipTM=0.15 tol=2.17 2024-07-28 19:11:39,173 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.2 pTM=0.383 ipTM=0.151 tol=3.75 2024-07-28 19:11:39,174 alphafold2_multimer_v3_model_2_seed_000 took 330.0s (30 recycles) 2024-07-28 19:11:50,210 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.8 pTM=0.407 ipTM=0.153 2024-07-28 19:12:00,887 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.4 pTM=0.404 ipTM=0.18 tol=7.93 2024-07-28 19:12:11,570 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.9 pTM=0.391 ipTM=0.141 tol=9.13 2024-07-28 19:12:22,266 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.8 pTM=0.393 ipTM=0.139 tol=7.61 2024-07-28 19:12:32,948 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.7 pTM=0.392 ipTM=0.139 tol=4.2 2024-07-28 19:12:43,637 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54 pTM=0.394 ipTM=0.144 tol=4.07 2024-07-28 19:12:54,332 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.2 pTM=0.391 ipTM=0.144 tol=6 2024-07-28 19:13:05,027 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.9 pTM=0.396 ipTM=0.142 tol=3.92 2024-07-28 19:13:15,705 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.8 pTM=0.393 ipTM=0.142 tol=2.64 2024-07-28 19:13:26,396 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.2 pTM=0.4 ipTM=0.146 tol=3.05 2024-07-28 19:13:37,092 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.2 pTM=0.392 ipTM=0.145 tol=2.02 2024-07-28 19:13:47,775 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54 pTM=0.398 ipTM=0.15 tol=1.78 2024-07-28 19:13:58,450 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.2 pTM=0.39 ipTM=0.146 tol=1.99 2024-07-28 19:14:09,140 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54 pTM=0.397 ipTM=0.144 tol=1.97 2024-07-28 19:14:19,835 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54 pTM=0.391 ipTM=0.145 tol=1.65 2024-07-28 19:14:30,513 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.6 pTM=0.397 ipTM=0.152 tol=1.77 2024-07-28 19:14:41,215 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.8 pTM=0.392 ipTM=0.148 tol=2.11 2024-07-28 19:14:51,890 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.6 pTM=0.4 ipTM=0.155 tol=1.86 2024-07-28 19:15:02,583 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.9 pTM=0.394 ipTM=0.153 tol=2.57 2024-07-28 19:15:13,262 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.9 pTM=0.394 ipTM=0.148 tol=2.72 2024-07-28 19:15:23,949 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.8 pTM=0.394 ipTM=0.147 tol=3.42 2024-07-28 19:15:34,643 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.5 pTM=0.394 ipTM=0.144 tol=2.31 2024-07-28 19:15:45,313 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.5 pTM=0.393 ipTM=0.144 tol=2.25 2024-07-28 19:15:56,013 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.3 pTM=0.398 ipTM=0.149 tol=2.05 2024-07-28 19:16:06,705 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.1 pTM=0.393 ipTM=0.146 tol=2.64 2024-07-28 19:16:17,401 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.1 pTM=0.396 ipTM=0.148 tol=1.97 2024-07-28 19:16:28,087 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.1 pTM=0.396 ipTM=0.152 tol=1.85 2024-07-28 19:16:38,782 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.1 pTM=0.394 ipTM=0.146 tol=1.95 2024-07-28 19:16:49,467 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.2 pTM=0.398 ipTM=0.152 tol=2.38 2024-07-28 19:17:00,155 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.8 pTM=0.393 ipTM=0.146 tol=1.82 2024-07-28 19:17:10,842 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.6 pTM=0.395 ipTM=0.146 tol=1.83 2024-07-28 19:17:10,843 alphafold2_multimer_v3_model_3_seed_000 took 331.3s (30 recycles) 2024-07-28 19:17:21,894 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.5 pTM=0.387 ipTM=0.141 2024-07-28 19:17:32,585 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55.9 pTM=0.392 ipTM=0.15 tol=13.6 2024-07-28 19:17:43,251 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.5 pTM=0.39 ipTM=0.144 tol=5.74 2024-07-28 19:17:53,909 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.5 pTM=0.396 ipTM=0.152 tol=6.7 2024-07-28 19:18:04,545 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.3 pTM=0.398 ipTM=0.172 tol=5.02 2024-07-28 19:18:15,190 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.4 pTM=0.391 ipTM=0.159 tol=3.17 2024-07-28 19:18:25,851 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.1 pTM=0.384 ipTM=0.148 tol=2.64 2024-07-28 19:18:36,493 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.2 pTM=0.394 ipTM=0.155 tol=3.3 2024-07-28 19:18:47,151 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.2 pTM=0.387 ipTM=0.15 tol=2.88 2024-07-28 19:18:57,814 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.4 pTM=0.398 ipTM=0.155 tol=2.18 2024-07-28 19:19:08,475 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.7 pTM=0.407 ipTM=0.178 tol=4.11 2024-07-28 19:19:19,131 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.5 pTM=0.395 ipTM=0.173 tol=3.84 2024-07-28 19:19:29,805 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.4 pTM=0.39 ipTM=0.146 tol=3.75 2024-07-28 19:19:40,471 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.2 pTM=0.39 ipTM=0.145 tol=2.61 2024-07-28 19:19:51,153 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.1 pTM=0.39 ipTM=0.147 tol=2.59 2024-07-28 19:20:01,825 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.6 pTM=0.385 ipTM=0.149 tol=3.37 2024-07-28 19:20:12,504 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.1 pTM=0.398 ipTM=0.213 tol=5.12 2024-07-28 19:20:23,168 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56 pTM=0.401 ipTM=0.165 tol=5.22 2024-07-28 19:20:33,843 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.8 pTM=0.391 ipTM=0.154 tol=3.45 2024-07-28 19:20:44,515 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.2 pTM=0.392 ipTM=0.174 tol=4.58 2024-07-28 19:20:55,180 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.7 pTM=0.394 ipTM=0.155 tol=3.11 2024-07-28 19:21:05,848 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.2 pTM=0.391 ipTM=0.16 tol=2.77 2024-07-28 19:21:16,528 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.9 pTM=0.393 ipTM=0.152 tol=2.86 2024-07-28 19:21:27,202 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.2 pTM=0.386 ipTM=0.151 tol=2.45 2024-07-28 19:21:37,882 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56 pTM=0.393 ipTM=0.15 tol=1.86 2024-07-28 19:21:48,540 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.2 pTM=0.383 ipTM=0.149 tol=3.07 2024-07-28 19:21:59,212 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.2 pTM=0.39 ipTM=0.156 tol=3.07 2024-07-28 19:22:09,874 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=56.3 pTM=0.389 ipTM=0.144 tol=4.13 2024-07-28 19:22:20,542 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.1 pTM=0.393 ipTM=0.154 tol=3.77 2024-07-28 19:22:31,206 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.2 pTM=0.387 ipTM=0.15 tol=2.65 2024-07-28 19:22:41,876 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56 pTM=0.391 ipTM=0.153 tol=2.23 2024-07-28 19:22:41,877 alphafold2_multimer_v3_model_4_seed_000 took 330.7s (30 recycles) 2024-07-28 19:22:52,907 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.4 pTM=0.388 ipTM=0.146 2024-07-28 19:23:03,593 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.1 pTM=0.39 ipTM=0.154 tol=10.6 2024-07-28 19:23:14,297 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=53.6 pTM=0.392 ipTM=0.146 tol=7.52 2024-07-28 19:23:24,979 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.5 pTM=0.387 ipTM=0.151 tol=2.94 2024-07-28 19:23:35,667 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.6 pTM=0.385 ipTM=0.149 tol=2.88 2024-07-28 19:23:46,354 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54 pTM=0.389 ipTM=0.144 tol=3.46 2024-07-28 19:23:57,036 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.8 pTM=0.385 ipTM=0.144 tol=2.99 2024-07-28 19:24:07,743 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.5 pTM=0.388 ipTM=0.145 tol=2.36 2024-07-28 19:24:18,407 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.3 pTM=0.385 ipTM=0.143 tol=2.16 2024-07-28 19:24:29,077 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.3 pTM=0.387 ipTM=0.142 tol=1.87 2024-07-28 19:24:39,762 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.4 pTM=0.385 ipTM=0.146 tol=2.84 2024-07-28 19:24:50,453 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.6 pTM=0.387 ipTM=0.145 tol=2.48 2024-07-28 19:25:01,147 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.2 pTM=0.386 ipTM=0.147 tol=2.91 2024-07-28 19:25:11,834 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.5 pTM=0.384 ipTM=0.149 tol=3.46 2024-07-28 19:25:22,527 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.4 pTM=0.388 ipTM=0.147 tol=3.64 2024-07-28 19:25:33,210 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.4 pTM=0.384 ipTM=0.145 tol=3.72 2024-07-28 19:25:43,892 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.5 pTM=0.384 ipTM=0.146 tol=3.9 2024-07-28 19:25:54,564 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.5 pTM=0.388 ipTM=0.145 tol=3.96 2024-07-28 19:26:05,240 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.2 pTM=0.385 ipTM=0.147 tol=3.39 2024-07-28 19:26:15,917 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.3 pTM=0.384 ipTM=0.146 tol=4.95 2024-07-28 19:26:26,598 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.4 pTM=0.386 ipTM=0.147 tol=2.94 2024-07-28 19:26:37,284 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.2 pTM=0.386 ipTM=0.144 tol=1.76 2024-07-28 19:26:47,962 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.5 pTM=0.387 ipTM=0.148 tol=3.18 2024-07-28 19:26:58,645 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.6 pTM=0.389 ipTM=0.146 tol=1.04 2024-07-28 19:27:09,325 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.3 pTM=0.389 ipTM=0.146 tol=2.64 2024-07-28 19:27:20,004 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.5 pTM=0.388 ipTM=0.146 tol=2.08 2024-07-28 19:27:30,670 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.5 pTM=0.385 ipTM=0.146 tol=3.81 2024-07-28 19:27:41,332 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.7 pTM=0.39 ipTM=0.146 tol=3.38 2024-07-28 19:27:52,000 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.2 pTM=0.388 ipTM=0.146 tol=2.29 2024-07-28 19:28:02,665 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52.8 pTM=0.384 ipTM=0.147 tol=2.51 2024-07-28 19:28:13,333 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.1 pTM=0.387 ipTM=0.148 tol=2.61 2024-07-28 19:28:13,333 alphafold2_multimer_v3_model_5_seed_000 took 331.1s (30 recycles) 2024-07-28 19:28:13,671 reranking models by 'multimer' metric 2024-07-28 19:28:15,188 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 19:29:21,589 Relaxation took 67.9s 2024-07-28 19:29:21,589 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.5 pTM=0.403 ipTM=0.192 2024-07-28 19:30:23,481 Relaxation took 61.9s 2024-07-28 19:30:23,481 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56 pTM=0.391 ipTM=0.153 2024-07-28 19:31:14,608 Relaxation took 51.1s 2024-07-28 19:31:14,608 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.2 pTM=0.383 ipTM=0.151 2024-07-28 19:31:41,603 Relaxation took 27.0s 2024-07-28 19:31:41,604 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.6 pTM=0.395 ipTM=0.146 2024-07-28 19:32:20,345 Relaxation took 38.7s 2024-07-28 19:32:20,345 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.1 pTM=0.387 ipTM=0.148 2024-07-28 19:32:21,774 Done