2024-07-28 19:34:59,134 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 19:34:59,466 Running on GPU
2024-07-28 19:35:03,220 Found 6 citations for tools or databases
2024-07-28 19:35:03,220 Query 1/1: ZNF557_SPSB4 (length 704)
2024-07-28 19:35:03,655 Sleeping for 8s. Reason: PENDING
2024-07-28 19:35:12,084 Sleeping for 5s. Reason: RUNNING
2024-07-28 19:35:17,491 Sleeping for 6s. Reason: RUNNING
2024-07-28 19:35:23,914 Sleeping for 5s. Reason: RUNNING
2024-07-28 19:35:29,358 Sleeping for 9s. Reason: RUNNING
2024-07-28 19:35:38,799 Sleeping for 9s. Reason: RUNNING
2024-07-28 19:35:48,216 Sleeping for 10s. Reason: RUNNING
2024-07-28 19:35:58,643 Sleeping for 9s. Reason: RUNNING
2024-07-28 19:36:08,107 Sleeping for 8s. Reason: RUNNING
2024-07-28 19:36:16,544 Sleeping for 10s. Reason: RUNNING
2024-07-28 19:36:26,977 Sleeping for 9s. Reason: RUNNING
2024-07-28 19:36:36,395 Sleeping for 8s. Reason: RUNNING
2024-07-28 19:36:44,817 Sleeping for 6s. Reason: RUNNING
2024-07-28 19:36:51,260 Sleeping for 7s. Reason: RUNNING
2024-07-28 19:36:58,688 Sleeping for 9s. Reason: RUNNING
2024-07-28 19:37:08,164 Sleeping for 5s. Reason: RUNNING
2024-07-28 19:37:13,594 Sleeping for 7s. Reason: RUNNING
2024-07-28 19:37:21,010 Sleeping for 10s. Reason: RUNNING
2024-07-28 19:37:31,452 Sleeping for 10s. Reason: RUNNING
2024-07-28 19:37:41,879 Sleeping for 8s. Reason: RUNNING
2024-07-28 19:37:50,320 Sleeping for 6s. Reason: RUNNING
2024-07-28 19:37:56,764 Sleeping for 6s. Reason: RUNNING
2024-07-28 19:38:05,079 Sleeping for 9s. Reason: PENDING
2024-07-28 19:38:14,495 Sleeping for 10s. Reason: RUNNING
2024-07-28 19:38:24,940 Sleeping for 5s. Reason: RUNNING
2024-07-28 19:38:30,345 Sleeping for 10s. Reason: RUNNING
2024-07-28 19:38:40,760 Sleeping for 5s. Reason: RUNNING
2024-07-28 19:38:46,171 Sleeping for 9s. Reason: RUNNING
2024-07-28 19:38:55,591 Sleeping for 6s. Reason: RUNNING
2024-07-28 19:39:02,043 Sleeping for 9s. Reason: RUNNING
2024-07-28 19:39:14,704 Setting max_seq=508, max_extra_seq=2048
2024-07-28 19:41:31,609 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.4 pTM=0.371 ipTM=0.136
2024-07-28 19:41:40,606 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.5 pTM=0.381 ipTM=0.142 tol=6.23
2024-07-28 19:41:49,625 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.6 pTM=0.382 ipTM=0.139 tol=4.34
2024-07-28 19:41:58,652 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.5 pTM=0.384 ipTM=0.143 tol=2.98
2024-07-28 19:42:07,683 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.5 pTM=0.385 ipTM=0.139 tol=2.77
2024-07-28 19:42:16,722 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.6 pTM=0.388 ipTM=0.146 tol=2.51
2024-07-28 19:42:25,765 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.6 pTM=0.386 ipTM=0.141 tol=2.09
2024-07-28 19:42:34,811 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.2 pTM=0.389 ipTM=0.152 tol=1.96
2024-07-28 19:42:43,839 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.8 pTM=0.388 ipTM=0.139 tol=1.83
2024-07-28 19:42:52,886 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.4 pTM=0.388 ipTM=0.146 tol=1.51
2024-07-28 19:43:01,962 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.6 pTM=0.386 ipTM=0.14 tol=1.61
2024-07-28 19:43:11,023 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.1 pTM=0.39 ipTM=0.149 tol=1.28
2024-07-28 19:43:20,070 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.6 pTM=0.388 ipTM=0.141 tol=1.44
2024-07-28 19:43:29,141 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.8 pTM=0.39 ipTM=0.145 tol=1.23
2024-07-28 19:43:38,212 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.6 pTM=0.387 ipTM=0.141 tol=1.88
2024-07-28 19:43:47,291 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.2 pTM=0.39 ipTM=0.147 tol=1.78
2024-07-28 19:43:56,379 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.2 pTM=0.386 ipTM=0.142 tol=1.21
2024-07-28 19:44:05,438 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.2 pTM=0.388 ipTM=0.146 tol=1.32
2024-07-28 19:44:14,538 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.6 pTM=0.387 ipTM=0.141 tol=1.33
2024-07-28 19:44:23,578 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.1 pTM=0.387 ipTM=0.148 tol=1.68
2024-07-28 19:44:32,668 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.7 pTM=0.387 ipTM=0.142 tol=1.29
2024-07-28 19:44:41,728 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.6 pTM=0.387 ipTM=0.15 tol=1.14
2024-07-28 19:44:50,809 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.8 pTM=0.387 ipTM=0.141 tol=0.871
2024-07-28 19:44:59,889 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.6 pTM=0.388 ipTM=0.148 tol=1.34
2024-07-28 19:45:08,969 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.4 pTM=0.387 ipTM=0.144 tol=0.91
2024-07-28 19:45:18,067 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.8 pTM=0.388 ipTM=0.148 tol=0.853
2024-07-28 19:45:27,117 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58.6 pTM=0.389 ipTM=0.142 tol=1.39
2024-07-28 19:45:36,199 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.9 pTM=0.388 ipTM=0.148 tol=1.27
2024-07-28 19:45:45,268 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.2 pTM=0.389 ipTM=0.142 tol=1.4
2024-07-28 19:45:54,348 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.1 pTM=0.389 ipTM=0.147 tol=1.32
2024-07-28 19:46:03,420 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.6 pTM=0.389 ipTM=0.142 tol=1.49
2024-07-28 19:46:03,421 alphafold2_multimer_v3_model_1_seed_000 took 405.1s (30 recycles)
2024-07-28 19:46:12,837 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.7 pTM=0.369 ipTM=0.152
2024-07-28 19:46:21,924 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.2 pTM=0.371 ipTM=0.144 tol=5.88
2024-07-28 19:46:31,034 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.5 pTM=0.369 ipTM=0.152 tol=8.59
2024-07-28 19:46:40,139 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.4 pTM=0.37 ipTM=0.149 tol=6.56
2024-07-28 19:46:49,238 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.8 pTM=0.369 ipTM=0.147 tol=2.4
2024-07-28 19:46:58,354 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.9 pTM=0.371 ipTM=0.148 tol=2.79
2024-07-28 19:47:07,448 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.9 pTM=0.371 ipTM=0.147 tol=2.23
2024-07-28 19:47:16,557 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.7 pTM=0.371 ipTM=0.15 tol=2.42
2024-07-28 19:47:25,679 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.1 pTM=0.372 ipTM=0.147 tol=3.41
2024-07-28 19:47:34,793 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.2 pTM=0.372 ipTM=0.146 tol=2.05
2024-07-28 19:47:43,909 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.6 pTM=0.371 ipTM=0.152 tol=1.58
2024-07-28 19:47:53,017 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.1 pTM=0.371 ipTM=0.149 tol=2.32
2024-07-28 19:48:02,106 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.8 pTM=0.372 ipTM=0.156 tol=2.01
2024-07-28 19:48:11,211 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58 pTM=0.372 ipTM=0.159 tol=2.66
2024-07-28 19:48:20,299 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.7 pTM=0.373 ipTM=0.155 tol=1.82
2024-07-28 19:48:29,381 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.4 pTM=0.373 ipTM=0.159 tol=1.98
2024-07-28 19:48:38,484 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.2 pTM=0.373 ipTM=0.163 tol=2.83
2024-07-28 19:48:47,577 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.3 pTM=0.373 ipTM=0.159 tol=3.46
2024-07-28 19:48:56,681 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.2 pTM=0.372 ipTM=0.16 tol=3.65
2024-07-28 19:49:05,760 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.4 pTM=0.371 ipTM=0.164 tol=3.12
2024-07-28 19:49:14,852 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.3 pTM=0.372 ipTM=0.162 tol=1.46
2024-07-28 19:49:23,968 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.3 pTM=0.372 ipTM=0.162 tol=3.75
2024-07-28 19:49:33,051 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.5 pTM=0.372 ipTM=0.162 tol=2.32
2024-07-28 19:49:42,144 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.9 pTM=0.372 ipTM=0.162 tol=2.12
2024-07-28 19:49:51,256 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.2 pTM=0.372 ipTM=0.162 tol=1.12
2024-07-28 19:50:00,354 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.2 pTM=0.372 ipTM=0.163 tol=1.84
2024-07-28 19:50:09,440 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.5 pTM=0.372 ipTM=0.157 tol=2.1
2024-07-28 19:50:18,558 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.8 pTM=0.371 ipTM=0.16 tol=1.61
2024-07-28 19:50:27,677 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.5 pTM=0.371 ipTM=0.159 tol=1.36
2024-07-28 19:50:36,797 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.1 pTM=0.371 ipTM=0.156 tol=1.05
2024-07-28 19:50:45,933 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.3 pTM=0.372 ipTM=0.158 tol=1.72
2024-07-28 19:50:45,933 alphafold2_multimer_v3_model_2_seed_000 took 282.2s (30 recycles)
2024-07-28 19:50:55,379 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.9 pTM=0.38 ipTM=0.173
2024-07-28 19:51:04,508 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.9 pTM=0.379 ipTM=0.134 tol=14.7
2024-07-28 19:51:13,661 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.3 pTM=0.385 ipTM=0.138 tol=7.43
2024-07-28 19:51:22,790 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60 pTM=0.383 ipTM=0.137 tol=3.43
2024-07-28 19:51:31,945 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.3 pTM=0.384 ipTM=0.14 tol=2.63
2024-07-28 19:51:41,082 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.7 pTM=0.383 ipTM=0.137 tol=2.4
2024-07-28 19:51:50,245 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.2 pTM=0.386 ipTM=0.144 tol=2.36
2024-07-28 19:51:59,401 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.4 pTM=0.384 ipTM=0.139 tol=1.5
2024-07-28 19:52:08,534 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.6 pTM=0.385 ipTM=0.141 tol=2
2024-07-28 19:52:17,677 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.9 pTM=0.385 ipTM=0.14 tol=1.55
2024-07-28 19:52:26,810 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.7 pTM=0.384 ipTM=0.14 tol=1.85
2024-07-28 19:52:35,932 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.1 pTM=0.384 ipTM=0.146 tol=2.38
2024-07-28 19:52:45,082 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.1 pTM=0.383 ipTM=0.151 tol=2.21
2024-07-28 19:52:54,236 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.3 pTM=0.385 ipTM=0.149 tol=1.9
2024-07-28 19:53:03,391 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59 pTM=0.388 ipTM=0.166 tol=2.7
2024-07-28 19:53:12,519 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.4 pTM=0.384 ipTM=0.148 tol=2.23
2024-07-28 19:53:21,656 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.6 pTM=0.384 ipTM=0.156 tol=1.32
2024-07-28 19:53:30,769 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.7 pTM=0.383 ipTM=0.146 tol=1.3
2024-07-28 19:53:39,894 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.6 pTM=0.385 ipTM=0.151 tol=2
2024-07-28 19:53:49,011 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.2 pTM=0.383 ipTM=0.151 tol=1.95
2024-07-28 19:53:58,137 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.3 pTM=0.387 ipTM=0.167 tol=1.84
2024-07-28 19:54:07,294 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59 pTM=0.384 ipTM=0.151 tol=2.31
2024-07-28 19:54:16,426 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59.2 pTM=0.386 ipTM=0.146 tol=1.89
2024-07-28 19:54:25,590 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.5 pTM=0.383 ipTM=0.144 tol=1.69
2024-07-28 19:54:34,725 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.8 pTM=0.386 ipTM=0.151 tol=3.19
2024-07-28 19:54:43,865 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.3 pTM=0.385 ipTM=0.153 tol=3.53
2024-07-28 19:54:52,981 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59 pTM=0.386 ipTM=0.165 tol=1.59
2024-07-28 19:55:02,113 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=59 pTM=0.384 ipTM=0.148 tol=1.36
2024-07-28 19:55:11,247 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.3 pTM=0.385 ipTM=0.157 tol=1.27
2024-07-28 19:55:20,382 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.4 pTM=0.384 ipTM=0.149 tol=1.45
2024-07-28 19:55:29,505 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=59.2 pTM=0.387 ipTM=0.16 tol=1.83
2024-07-28 19:55:29,505 alphafold2_multimer_v3_model_3_seed_000 took 283.2s (30 recycles)
2024-07-28 19:55:39,002 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.4 pTM=0.362 ipTM=0.135
2024-07-28 19:55:48,127 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63 pTM=0.37 ipTM=0.142 tol=9.68
2024-07-28 19:55:57,258 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.4 pTM=0.371 ipTM=0.139 tol=2.95
2024-07-28 19:56:06,414 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.8 pTM=0.37 ipTM=0.138 tol=4.71
2024-07-28 19:56:15,522 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.8 pTM=0.371 ipTM=0.139 tol=2.06
2024-07-28 19:56:24,679 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61 pTM=0.373 ipTM=0.139 tol=2.04
2024-07-28 19:56:33,818 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.8 pTM=0.372 ipTM=0.136 tol=1.56
2024-07-28 19:56:42,971 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.8 pTM=0.371 ipTM=0.137 tol=1.32
2024-07-28 19:56:52,091 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61 pTM=0.372 ipTM=0.135 tol=1.63
2024-07-28 19:57:01,239 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.7 pTM=0.373 ipTM=0.137 tol=1.73
2024-07-28 19:57:10,372 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.7 pTM=0.37 ipTM=0.139 tol=1.49
2024-07-28 19:57:19,497 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.8 pTM=0.375 ipTM=0.142 tol=1.59
2024-07-28 19:57:28,624 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.4 pTM=0.373 ipTM=0.14 tol=1.48
2024-07-28 19:57:37,759 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.1 pTM=0.374 ipTM=0.143 tol=1.37
2024-07-28 19:57:46,878 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.3 pTM=0.372 ipTM=0.139 tol=1.1
2024-07-28 19:57:56,001 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.4 pTM=0.375 ipTM=0.145 tol=1.34
2024-07-28 19:58:05,108 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.1 pTM=0.373 ipTM=0.141 tol=1.22
2024-07-28 19:58:14,241 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.6 pTM=0.374 ipTM=0.142 tol=1.9
2024-07-28 19:58:23,388 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.7 pTM=0.372 ipTM=0.141 tol=1.19
2024-07-28 19:58:32,532 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.5 pTM=0.373 ipTM=0.14 tol=1.13
2024-07-28 19:58:41,674 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.6 pTM=0.372 ipTM=0.144 tol=1.49
2024-07-28 19:58:50,797 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.7 pTM=0.374 ipTM=0.141 tol=1.35
2024-07-28 19:58:59,937 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.5 pTM=0.373 ipTM=0.139 tol=1.23
2024-07-28 19:59:09,065 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=61 pTM=0.375 ipTM=0.149 tol=1.09
2024-07-28 19:59:18,223 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.7 pTM=0.372 ipTM=0.138 tol=1.24
2024-07-28 19:59:27,332 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.3 pTM=0.374 ipTM=0.14 tol=1.17
2024-07-28 19:59:36,472 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.6 pTM=0.375 ipTM=0.14 tol=1.42
2024-07-28 19:59:45,596 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.5 pTM=0.375 ipTM=0.144 tol=1.06
2024-07-28 19:59:54,722 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.2 pTM=0.374 ipTM=0.141 tol=1.27
2024-07-28 20:00:03,838 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.3 pTM=0.375 ipTM=0.142 tol=1.02
2024-07-28 20:00:12,975 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.2 pTM=0.373 ipTM=0.14 tol=2.01
2024-07-28 20:00:12,975 alphafold2_multimer_v3_model_4_seed_000 took 283.1s (30 recycles)
2024-07-28 20:00:22,417 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59 pTM=0.373 ipTM=0.153
2024-07-28 20:00:31,559 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.5 pTM=0.372 ipTM=0.148 tol=9.83
2024-07-28 20:00:40,717 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.4 pTM=0.372 ipTM=0.141 tol=6.77
2024-07-28 20:00:49,852 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.8 pTM=0.371 ipTM=0.135 tol=6.79
2024-07-28 20:00:58,973 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.8 pTM=0.372 ipTM=0.134 tol=4.76
2024-07-28 20:01:08,085 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.7 pTM=0.373 ipTM=0.137 tol=3.45
2024-07-28 20:01:17,213 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.7 pTM=0.373 ipTM=0.13 tol=4
2024-07-28 20:01:26,322 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59 pTM=0.373 ipTM=0.134 tol=3.78
2024-07-28 20:01:35,429 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59 pTM=0.375 ipTM=0.132 tol=3.21
2024-07-28 20:01:44,556 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.2 pTM=0.374 ipTM=0.134 tol=2.37
2024-07-28 20:01:53,745 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.9 pTM=0.372 ipTM=0.133 tol=2
2024-07-28 20:02:02,882 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59 pTM=0.376 ipTM=0.134 tol=1.93
2024-07-28 20:02:12,059 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.7 pTM=0.375 ipTM=0.136 tol=1.69
2024-07-28 20:02:21,210 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.9 pTM=0.375 ipTM=0.134 tol=2.48
2024-07-28 20:02:30,363 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.7 pTM=0.375 ipTM=0.133 tol=2.29
2024-07-28 20:02:39,509 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.7 pTM=0.375 ipTM=0.135 tol=1.52
2024-07-28 20:02:48,668 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.4 pTM=0.374 ipTM=0.135 tol=1.29
2024-07-28 20:02:57,834 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58 pTM=0.374 ipTM=0.135 tol=2.82
2024-07-28 20:03:06,977 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.5 pTM=0.374 ipTM=0.135 tol=2.16
2024-07-28 20:03:16,115 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.5 pTM=0.373 ipTM=0.137 tol=2.51
2024-07-28 20:03:25,245 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59 pTM=0.376 ipTM=0.133 tol=3.81
2024-07-28 20:03:34,369 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58 pTM=0.373 ipTM=0.131 tol=2.52
2024-07-28 20:03:43,542 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.9 pTM=0.374 ipTM=0.131 tol=1.78
2024-07-28 20:03:52,713 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.1 pTM=0.374 ipTM=0.131 tol=1.91
2024-07-28 20:04:01,869 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.2 pTM=0.373 ipTM=0.134 tol=2.17
2024-07-28 20:04:11,015 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.8 pTM=0.375 ipTM=0.136 tol=2.64
2024-07-28 20:04:20,153 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.1 pTM=0.374 ipTM=0.133 tol=2.67
2024-07-28 20:04:29,298 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.8 pTM=0.375 ipTM=0.139 tol=1.49
2024-07-28 20:04:38,440 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.9 pTM=0.375 ipTM=0.138 tol=1.89
2024-07-28 20:04:47,621 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.4 pTM=0.374 ipTM=0.135 tol=1.32
2024-07-28 20:04:56,751 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.9 pTM=0.375 ipTM=0.137 tol=3.12
2024-07-28 20:04:56,751 alphafold2_multimer_v3_model_5_seed_000 took 283.5s (30 recycles)
2024-07-28 20:04:57,074 reranking models by 'multimer' metric
2024-07-28 20:05:00,136 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 20:06:06,927 Relaxation took 69.9s
2024-07-28 20:06:06,927 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=59.2 pTM=0.387 ipTM=0.16
2024-07-28 20:07:32,831 Relaxation took 85.9s
2024-07-28 20:07:32,831 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.3 pTM=0.372 ipTM=0.158
2024-07-28 20:08:39,934 Relaxation took 67.1s
2024-07-28 20:08:39,935 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.6 pTM=0.389 ipTM=0.142
2024-07-28 20:09:20,310 Relaxation took 40.4s
2024-07-28 20:09:20,310 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.2 pTM=0.373 ipTM=0.14
2024-07-28 20:10:11,454 Relaxation took 51.1s
2024-07-28 20:10:11,454 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.9 pTM=0.375 ipTM=0.137
2024-07-28 20:10:12,751 Done