2024-07-28 20:27:49,897 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 20:27:50,214 Running on GPU 2024-07-28 20:27:53,793 Found 6 citations for tools or databases 2024-07-28 20:27:53,793 Query 1/1: ZNF566_KDM2B (length 1755) 2024-07-28 20:27:54,259 Sleeping for 10s. Reason: PENDING 2024-07-28 20:28:04,675 Sleeping for 9s. Reason: RUNNING 2024-07-28 20:28:14,123 Sleeping for 9s. Reason: RUNNING 2024-07-28 20:28:23,565 Sleeping for 8s. Reason: RUNNING 2024-07-28 20:28:31,991 Sleeping for 8s. Reason: RUNNING 2024-07-28 20:28:40,424 Sleeping for 6s. Reason: RUNNING 2024-07-28 20:28:46,842 Sleeping for 8s. Reason: RUNNING 2024-07-28 20:28:55,266 Sleeping for 8s. Reason: RUNNING 2024-07-28 20:29:03,703 Sleeping for 10s. Reason: RUNNING 2024-07-28 20:29:14,127 Sleeping for 5s. Reason: RUNNING 2024-07-28 20:29:19,552 Sleeping for 6s. Reason: RUNNING 2024-07-28 20:29:26,026 Sleeping for 8s. Reason: RUNNING 2024-07-28 20:29:34,462 Sleeping for 8s. Reason: RUNNING 2024-07-28 20:29:42,892 Sleeping for 6s. Reason: RUNNING 2024-07-28 20:29:49,348 Sleeping for 9s. Reason: RUNNING 2024-07-28 20:29:58,758 Sleeping for 7s. Reason: RUNNING 2024-07-28 20:30:06,179 Sleeping for 10s. Reason: RUNNING 2024-07-28 20:30:16,613 Sleeping for 10s. Reason: RUNNING 2024-07-28 20:30:27,021 Sleeping for 6s. Reason: RUNNING 2024-07-28 20:30:33,459 Sleeping for 8s. Reason: RUNNING 2024-07-28 20:30:43,887 Sleeping for 7s. Reason: PENDING 2024-07-28 20:30:51,323 Sleeping for 8s. Reason: RUNNING 2024-07-28 20:30:59,760 Sleeping for 10s. Reason: RUNNING 2024-07-28 20:31:10,178 Sleeping for 5s. Reason: RUNNING 2024-07-28 20:31:15,582 Sleeping for 5s. Reason: RUNNING 2024-07-28 20:31:20,997 Sleeping for 6s. Reason: RUNNING 2024-07-28 20:31:27,405 Sleeping for 10s. Reason: RUNNING 2024-07-28 20:31:37,818 Sleeping for 6s. Reason: RUNNING 2024-07-28 20:31:44,249 Sleeping for 5s. Reason: RUNNING 2024-07-28 20:31:49,668 Sleeping for 7s. Reason: RUNNING 2024-07-28 20:31:57,094 Sleeping for 6s. Reason: RUNNING 2024-07-28 20:32:03,527 Sleeping for 5s. Reason: RUNNING 2024-07-28 20:32:08,953 Sleeping for 9s. Reason: RUNNING 2024-07-28 20:32:18,385 Sleeping for 10s. Reason: RUNNING 2024-07-28 20:32:28,809 Sleeping for 10s. Reason: RUNNING 2024-07-28 20:32:39,244 Sleeping for 5s. Reason: RUNNING 2024-07-28 20:32:50,338 Setting max_seq=508, max_extra_seq=2048 2024-07-28 20:37:57,591 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50 pTM=0.363 ipTM=0.192 2024-07-28 20:39:42,965 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.6 pTM=0.365 ipTM=0.196 tol=13.5 2024-07-28 20:41:28,423 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.9 pTM=0.366 ipTM=0.195 tol=6.91 2024-07-28 20:43:13,972 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.2 pTM=0.365 ipTM=0.194 tol=4.49 2024-07-28 20:44:59,541 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.2 pTM=0.365 ipTM=0.198 tol=4.3 2024-07-28 20:46:45,150 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.6 pTM=0.366 ipTM=0.195 tol=4.13 2024-07-28 20:48:30,779 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.5 pTM=0.367 ipTM=0.197 tol=2.87 2024-07-28 20:50:16,395 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.8 pTM=0.367 ipTM=0.197 tol=2.58 2024-07-28 20:52:02,002 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.8 pTM=0.367 ipTM=0.196 tol=3.07 2024-07-28 20:53:47,614 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51 pTM=0.367 ipTM=0.197 tol=3.56 2024-07-28 20:55:33,248 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.9 pTM=0.367 ipTM=0.198 tol=3.66 2024-07-28 20:57:18,885 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.2 pTM=0.368 ipTM=0.198 tol=3.96 2024-07-28 20:59:04,526 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.1 pTM=0.368 ipTM=0.198 tol=8.42 2024-07-28 21:00:50,223 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.2 pTM=0.368 ipTM=0.198 tol=4.25 2024-07-28 21:02:35,819 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.1 pTM=0.368 ipTM=0.197 tol=2.92 2024-07-28 21:04:21,476 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.1 pTM=0.368 ipTM=0.199 tol=2.84 2024-07-28 21:06:07,144 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.2 pTM=0.369 ipTM=0.197 tol=5.81 2024-07-28 21:07:52,812 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.4 pTM=0.368 ipTM=0.197 tol=6.13 2024-07-28 21:09:38,469 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.3 pTM=0.369 ipTM=0.199 tol=2.54 2024-07-28 21:11:24,101 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.1 pTM=0.369 ipTM=0.198 tol=2.68 2024-07-28 21:13:09,764 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.2 pTM=0.369 ipTM=0.198 tol=2.19 2024-07-28 21:14:55,382 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51 pTM=0.368 ipTM=0.197 tol=9.52 2024-07-28 21:16:40,964 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51 pTM=0.369 ipTM=0.198 tol=9.81 2024-07-28 21:18:26,556 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.1 pTM=0.368 ipTM=0.198 tol=2.29 2024-07-28 21:20:12,157 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.1 pTM=0.369 ipTM=0.198 tol=7.86 2024-07-28 21:21:57,780 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51 pTM=0.369 ipTM=0.198 tol=8.13 2024-07-28 21:23:43,366 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.1 pTM=0.369 ipTM=0.196 tol=2.65 2024-07-28 21:25:28,964 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.2 pTM=0.368 ipTM=0.197 tol=2.25 2024-07-28 21:27:14,557 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.1 pTM=0.369 ipTM=0.197 tol=2.9 2024-07-28 21:29:00,172 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.9 pTM=0.369 ipTM=0.197 tol=2.88 2024-07-28 21:30:45,793 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51 pTM=0.368 ipTM=0.197 tol=2.43 2024-07-28 21:30:45,794 alphafold2_multimer_v3_model_1_seed_000 took 3464.8s (30 recycles) 2024-07-28 21:32:33,178 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.7 pTM=0.383 ipTM=0.214 2024-07-28 21:34:18,886 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50.8 pTM=0.366 ipTM=0.201 tol=17.7 2024-07-28 21:36:04,652 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.2 pTM=0.366 ipTM=0.2 tol=8.23 2024-07-28 21:37:50,431 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.6 pTM=0.366 ipTM=0.2 tol=5.01 2024-07-28 21:39:36,248 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.9 pTM=0.366 ipTM=0.2 tol=3.56 2024-07-28 21:41:22,069 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.2 pTM=0.366 ipTM=0.198 tol=3.61 2024-07-28 21:43:07,876 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.1 pTM=0.365 ipTM=0.198 tol=3.44 2024-07-28 21:44:53,703 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.3 pTM=0.366 ipTM=0.196 tol=3.56 2024-07-28 21:46:39,524 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.3 pTM=0.366 ipTM=0.196 tol=3.96 2024-07-28 21:48:25,317 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.4 pTM=0.365 ipTM=0.195 tol=3.67 2024-07-28 21:50:11,163 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.3 pTM=0.365 ipTM=0.197 tol=4.55 2024-07-28 21:51:57,043 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.6 pTM=0.365 ipTM=0.195 tol=4.68 2024-07-28 21:53:42,862 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.4 pTM=0.365 ipTM=0.196 tol=4.7 2024-07-28 21:55:28,681 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.5 pTM=0.365 ipTM=0.196 tol=7.98 2024-07-28 21:57:14,435 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.3 pTM=0.366 ipTM=0.196 tol=6.59 2024-07-28 21:59:00,211 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.2 pTM=0.365 ipTM=0.197 tol=5.16 2024-07-28 22:00:46,034 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.4 pTM=0.365 ipTM=0.195 tol=3.09 2024-07-28 22:02:31,837 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.6 pTM=0.365 ipTM=0.194 tol=3.74 2024-07-28 22:04:17,650 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.5 pTM=0.365 ipTM=0.195 tol=2.38 2024-07-28 22:06:03,495 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.6 pTM=0.365 ipTM=0.196 tol=2.24 2024-07-28 22:07:49,369 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.5 pTM=0.365 ipTM=0.197 tol=2.74 2024-07-28 22:09:35,208 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.5 pTM=0.365 ipTM=0.197 tol=2.39 2024-07-28 22:11:21,043 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.5 pTM=0.365 ipTM=0.197 tol=2.24 2024-07-28 22:13:06,864 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.8 pTM=0.366 ipTM=0.197 tol=2.41 2024-07-28 22:14:52,708 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.8 pTM=0.366 ipTM=0.198 tol=3.85 2024-07-28 22:16:38,567 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.7 pTM=0.366 ipTM=0.195 tol=3.86 2024-07-28 22:18:24,354 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.8 pTM=0.366 ipTM=0.195 tol=6.81 2024-07-28 22:20:10,193 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.7 pTM=0.366 ipTM=0.196 tol=5.18 2024-07-28 22:21:56,040 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.8 pTM=0.367 ipTM=0.197 tol=3.03 2024-07-28 22:23:41,879 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.6 pTM=0.367 ipTM=0.197 tol=4.23 2024-07-28 22:25:27,720 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.5 pTM=0.368 ipTM=0.197 tol=4.74 2024-07-28 22:25:27,722 alphafold2_multimer_v3_model_2_seed_000 took 3280.1s (30 recycles) 2024-07-28 22:27:15,450 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.4 pTM=0.36 ipTM=0.224 2024-07-28 22:29:01,381 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.1 pTM=0.361 ipTM=0.212 tol=18 2024-07-28 22:30:47,386 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.9 pTM=0.361 ipTM=0.211 tol=12.9 2024-07-28 22:32:33,368 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=52.4 pTM=0.363 ipTM=0.218 tol=8.16 2024-07-28 22:34:19,338 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=52.3 pTM=0.364 ipTM=0.22 tol=6.97 2024-07-28 22:36:05,322 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=52.4 pTM=0.365 ipTM=0.215 tol=3.96 2024-07-28 22:37:51,242 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=52.4 pTM=0.367 ipTM=0.216 tol=4.05 2024-07-28 22:39:37,197 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.5 pTM=0.367 ipTM=0.216 tol=4.15 2024-07-28 22:41:23,140 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52.5 pTM=0.368 ipTM=0.222 tol=3.87 2024-07-28 22:43:09,091 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.7 pTM=0.368 ipTM=0.225 tol=3.21 2024-07-28 22:44:55,050 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=52.8 pTM=0.368 ipTM=0.224 tol=3.58 2024-07-28 22:46:41,043 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.7 pTM=0.368 ipTM=0.218 tol=6.1 2024-07-28 22:48:27,048 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52.7 pTM=0.367 ipTM=0.21 tol=2.94 2024-07-28 22:50:13,064 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.9 pTM=0.367 ipTM=0.212 tol=2.88 2024-07-28 22:51:59,044 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=52.6 pTM=0.366 ipTM=0.214 tol=6.43 2024-07-28 22:53:44,997 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52.6 pTM=0.366 ipTM=0.211 tol=4.23 2024-07-28 22:55:30,965 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=52.7 pTM=0.365 ipTM=0.213 tol=2.96 2024-07-28 22:57:16,959 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=52.8 pTM=0.365 ipTM=0.209 tol=6.01 2024-07-28 22:59:03,019 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.7 pTM=0.365 ipTM=0.209 tol=6.68 2024-07-28 23:00:49,041 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=52.5 pTM=0.366 ipTM=0.211 tol=2.83 2024-07-28 23:02:35,052 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.6 pTM=0.366 ipTM=0.222 tol=3.2 2024-07-28 23:04:21,053 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=52.5 pTM=0.365 ipTM=0.211 tol=2.67 2024-07-28 23:06:07,028 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=52.6 pTM=0.366 ipTM=0.223 tol=5.85 2024-07-28 23:07:53,012 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52.6 pTM=0.365 ipTM=0.216 tol=2.97 2024-07-28 23:09:39,035 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.6 pTM=0.366 ipTM=0.224 tol=5.61 2024-07-28 23:11:25,075 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.6 pTM=0.365 ipTM=0.21 tol=2.99 2024-07-28 23:13:11,133 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.7 pTM=0.365 ipTM=0.221 tol=6.14 2024-07-28 23:14:57,162 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.4 pTM=0.365 ipTM=0.208 tol=5.9 2024-07-28 23:16:43,143 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52.7 pTM=0.365 ipTM=0.216 tol=5.39 2024-07-28 23:18:29,159 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=52.4 pTM=0.365 ipTM=0.208 tol=3.34 2024-07-28 23:20:15,166 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=52.7 pTM=0.366 ipTM=0.216 tol=3.69 2024-07-28 23:20:15,168 alphafold2_multimer_v3_model_3_seed_000 took 3285.7s (30 recycles) 2024-07-28 23:22:02,822 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.3 pTM=0.361 ipTM=0.277 2024-07-28 23:23:48,941 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=51.6 pTM=0.357 ipTM=0.202 tol=14.7 2024-07-28 23:25:35,023 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52 pTM=0.358 ipTM=0.205 tol=9.54 2024-07-28 23:27:21,070 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.4 pTM=0.358 ipTM=0.204 tol=9.25 2024-07-28 23:29:07,103 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=52.2 pTM=0.36 ipTM=0.202 tol=9.12 2024-07-28 23:30:53,016 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=52.3 pTM=0.361 ipTM=0.208 tol=7.98 2024-07-28 23:32:38,917 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.4 pTM=0.36 ipTM=0.214 tol=5.98 2024-07-28 23:34:24,860 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.4 pTM=0.362 ipTM=0.21 tol=5.97 2024-07-28 23:36:10,852 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.3 pTM=0.363 ipTM=0.212 tol=3.2 2024-07-28 23:37:56,856 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.4 pTM=0.364 ipTM=0.215 tol=2.7 2024-07-28 23:39:42,885 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.6 pTM=0.364 ipTM=0.211 tol=5.35 2024-07-28 23:41:28,928 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.4 pTM=0.363 ipTM=0.212 tol=3.92 2024-07-28 23:43:14,925 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.6 pTM=0.364 ipTM=0.214 tol=1.9 2024-07-28 23:45:00,970 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=52.7 pTM=0.364 ipTM=0.214 tol=2.17 2024-07-28 23:46:47,037 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.5 pTM=0.364 ipTM=0.212 tol=3.31 2024-07-28 23:48:33,047 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.5 pTM=0.364 ipTM=0.215 tol=4.57 2024-07-28 23:50:19,025 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.8 pTM=0.364 ipTM=0.21 tol=4.75 2024-07-28 23:52:04,976 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.7 pTM=0.364 ipTM=0.216 tol=4.83 2024-07-28 23:53:50,918 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.8 pTM=0.365 ipTM=0.214 tol=4.84 2024-07-28 23:55:36,787 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.5 pTM=0.364 ipTM=0.211 tol=3.44 2024-07-28 23:57:22,701 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.8 pTM=0.365 ipTM=0.215 tol=5.54 2024-07-28 23:59:08,572 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.7 pTM=0.364 ipTM=0.21 tol=5.11 2024-07-29 00:00:54,448 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.6 pTM=0.365 ipTM=0.211 tol=1.85 2024-07-29 00:02:40,393 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.7 pTM=0.364 ipTM=0.214 tol=1.89 2024-07-29 00:04:26,343 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.6 pTM=0.364 ipTM=0.21 tol=5.95 2024-07-29 00:06:12,286 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.5 pTM=0.364 ipTM=0.213 tol=5.82 2024-07-29 00:07:58,216 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=52.6 pTM=0.364 ipTM=0.215 tol=1.93 2024-07-29 00:09:44,073 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.6 pTM=0.364 ipTM=0.219 tol=2.19 2024-07-29 00:11:29,979 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.7 pTM=0.364 ipTM=0.209 tol=3.17 2024-07-29 00:13:15,857 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.4 pTM=0.362 ipTM=0.214 tol=3.87 2024-07-29 00:15:01,720 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.4 pTM=0.363 ipTM=0.213 tol=4.59 2024-07-29 00:15:01,721 alphafold2_multimer_v3_model_4_seed_000 took 3284.8s (30 recycles) 2024-07-29 00:16:49,291 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49.8 pTM=0.361 ipTM=0.211 2024-07-29 00:18:35,060 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.8 pTM=0.36 ipTM=0.209 tol=16.2 2024-07-29 00:20:20,981 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.9 pTM=0.359 ipTM=0.202 tol=13.4 2024-07-29 00:22:06,841 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.9 pTM=0.361 ipTM=0.202 tol=12.1 2024-07-29 00:23:52,708 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.1 pTM=0.363 ipTM=0.206 tol=13.5 2024-07-29 00:25:38,599 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.5 pTM=0.363 ipTM=0.195 tol=10.1 2024-07-29 00:27:24,529 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.5 pTM=0.362 ipTM=0.198 tol=10.1 2024-07-29 00:29:10,484 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=52.7 pTM=0.362 ipTM=0.2 tol=6.67 2024-07-29 00:30:56,468 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.6 pTM=0.362 ipTM=0.206 tol=6.73 2024-07-29 00:32:42,468 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.6 pTM=0.361 ipTM=0.211 tol=9.02 2024-07-29 00:34:28,515 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.9 pTM=0.361 ipTM=0.207 tol=5.33 2024-07-29 00:36:14,466 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53 pTM=0.363 ipTM=0.207 tol=8.07 2024-07-29 00:38:00,371 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.9 pTM=0.363 ipTM=0.203 tol=7.23 2024-07-29 00:39:46,265 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.9 pTM=0.364 ipTM=0.207 tol=4.12 2024-07-29 00:41:32,158 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.9 pTM=0.366 ipTM=0.203 tol=4.85 2024-07-29 00:43:18,033 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=52.8 pTM=0.366 ipTM=0.206 tol=5.08 2024-07-29 00:45:03,943 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.8 pTM=0.366 ipTM=0.197 tol=5.8 2024-07-29 00:46:49,831 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53 pTM=0.366 ipTM=0.204 tol=6.69 2024-07-29 00:48:35,745 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=52.9 pTM=0.367 ipTM=0.202 tol=5.19 2024-07-29 00:50:21,576 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.7 pTM=0.366 ipTM=0.203 tol=5.12 2024-07-29 00:52:07,410 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.9 pTM=0.365 ipTM=0.194 tol=6.62 2024-07-29 00:53:53,193 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.1 pTM=0.364 ipTM=0.199 tol=6.89 2024-07-29 00:55:39,053 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.1 pTM=0.365 ipTM=0.196 tol=7.3 2024-07-29 00:57:24,897 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53 pTM=0.366 ipTM=0.201 tol=6.43 2024-07-29 00:59:10,771 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53 pTM=0.365 ipTM=0.195 tol=6.2 2024-07-29 01:00:56,669 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.1 pTM=0.364 ipTM=0.204 tol=4.06 2024-07-29 01:02:42,574 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.2 pTM=0.364 ipTM=0.195 tol=7.5 2024-07-29 01:04:28,496 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53 pTM=0.364 ipTM=0.2 tol=8.93 2024-07-29 01:06:14,407 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.2 pTM=0.365 ipTM=0.195 tol=6.78 2024-07-29 01:08:00,305 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53 pTM=0.365 ipTM=0.201 tol=6.57 2024-07-29 01:09:46,199 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.2 pTM=0.365 ipTM=0.197 tol=7.22 2024-07-29 01:09:46,201 alphafold2_multimer_v3_model_5_seed_000 took 3282.7s (30 recycles) 2024-07-29 01:09:47,990 reranking models by 'multimer' metric 2024-07-29 01:09:50,475 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-29 01:15:23,108 Relaxation took 335.1s 2024-07-29 01:15:23,108 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=52.7 pTM=0.366 ipTM=0.216 2024-07-29 01:20:09,972 Relaxation took 286.9s 2024-07-29 01:20:09,972 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.4 pTM=0.363 ipTM=0.213 2024-07-29 01:26:11,228 Relaxation took 361.3s 2024-07-29 01:26:11,229 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51 pTM=0.368 ipTM=0.197 2024-07-29 01:40:07,797 Relaxation took 836.6s 2024-07-29 01:40:07,798 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.5 pTM=0.368 ipTM=0.197 2024-07-29 01:47:24,224 Relaxation took 436.4s 2024-07-29 01:47:24,225 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.2 pTM=0.365 ipTM=0.197 2024-07-29 01:47:28,264 Done