2024-07-28 22:23:33,225 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-28 22:23:33,600 Running on GPU 2024-07-28 22:23:37,654 Found 6 citations for tools or databases 2024-07-28 22:23:37,654 Query 1/1: ZNF696_KLHL2 (length 967) 2024-07-28 22:23:38,106 Sleeping for 7s. Reason: PENDING 2024-07-28 22:23:45,559 Sleeping for 7s. Reason: RUNNING 2024-07-28 22:23:53,011 Sleeping for 9s. Reason: RUNNING 2024-07-28 22:24:02,454 Sleeping for 7s. Reason: RUNNING 2024-07-28 22:24:09,874 Sleeping for 8s. Reason: RUNNING 2024-07-28 22:24:18,309 Sleeping for 9s. Reason: RUNNING 2024-07-28 22:24:27,748 Sleeping for 10s. Reason: RUNNING 2024-07-28 22:24:38,164 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:24:43,599 Sleeping for 6s. Reason: RUNNING 2024-07-28 22:24:50,046 Sleeping for 6s. Reason: RUNNING 2024-07-28 22:24:56,471 Sleeping for 9s. Reason: RUNNING 2024-07-28 22:25:05,888 Sleeping for 7s. Reason: RUNNING 2024-07-28 22:25:13,319 Sleeping for 8s. Reason: RUNNING 2024-07-28 22:25:21,723 Sleeping for 8s. Reason: RUNNING 2024-07-28 22:25:30,143 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:25:35,558 Sleeping for 6s. Reason: RUNNING 2024-07-28 22:25:41,995 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:25:47,433 Sleeping for 9s. Reason: RUNNING 2024-07-28 22:25:56,891 Sleeping for 8s. Reason: RUNNING 2024-07-28 22:26:05,342 Sleeping for 10s. Reason: RUNNING 2024-07-28 22:26:15,806 Sleeping for 9s. Reason: RUNNING 2024-07-28 22:26:25,252 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:26:30,674 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:26:36,094 Sleeping for 6s. Reason: RUNNING 2024-07-28 22:26:42,519 Sleeping for 7s. Reason: RUNNING 2024-07-28 22:26:49,964 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:26:55,409 Sleeping for 7s. Reason: RUNNING 2024-07-28 22:27:02,845 Sleeping for 6s. Reason: RUNNING 2024-07-28 22:27:09,276 Sleeping for 6s. Reason: RUNNING 2024-07-28 22:27:15,718 Sleeping for 9s. Reason: RUNNING 2024-07-28 22:27:27,153 Sleeping for 9s. Reason: PENDING 2024-07-28 22:27:36,598 Sleeping for 8s. Reason: RUNNING 2024-07-28 22:27:45,001 Sleeping for 8s. Reason: RUNNING 2024-07-28 22:27:53,427 Sleeping for 6s. Reason: RUNNING 2024-07-28 22:27:59,863 Sleeping for 10s. Reason: RUNNING 2024-07-28 22:28:10,300 Sleeping for 10s. Reason: RUNNING 2024-07-28 22:28:20,720 Sleeping for 9s. Reason: RUNNING 2024-07-28 22:28:30,163 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:28:35,568 Sleeping for 6s. Reason: RUNNING 2024-07-28 22:28:41,985 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:28:47,408 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:28:52,831 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:28:58,247 Sleeping for 5s. Reason: RUNNING 2024-07-28 22:29:03,662 Sleeping for 8s. Reason: RUNNING 2024-07-28 22:29:17,066 Setting max_seq=508, max_extra_seq=2048 2024-07-28 22:33:28,751 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.9 pTM=0.394 ipTM=0.149 2024-07-28 22:33:53,313 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.8 pTM=0.396 ipTM=0.171 tol=8.45 2024-07-28 22:34:17,952 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.6 pTM=0.396 ipTM=0.159 tol=5 2024-07-28 22:34:42,626 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.4 pTM=0.395 ipTM=0.161 tol=2.91 2024-07-28 22:35:07,386 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.2 pTM=0.393 ipTM=0.153 tol=3.02 2024-07-28 22:35:32,198 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.2 pTM=0.393 ipTM=0.152 tol=2.21 2024-07-28 22:35:57,030 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.1 pTM=0.394 ipTM=0.15 tol=1.48 2024-07-28 22:36:21,847 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=69.2 pTM=0.395 ipTM=0.152 tol=2.22 2024-07-28 22:36:46,700 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=69.1 pTM=0.394 ipTM=0.152 tol=1.81 2024-07-28 22:37:11,569 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.1 pTM=0.395 ipTM=0.152 tol=1.92 2024-07-28 22:37:36,440 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.1 pTM=0.393 ipTM=0.151 tol=1.77 2024-07-28 22:38:01,301 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=69.6 pTM=0.394 ipTM=0.151 tol=2 2024-07-28 22:38:26,176 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.2 pTM=0.394 ipTM=0.15 tol=2.87 2024-07-28 22:38:51,041 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.1 pTM=0.395 ipTM=0.153 tol=1.48 2024-07-28 22:39:15,933 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=68.9 pTM=0.393 ipTM=0.153 tol=1.26 2024-07-28 22:39:40,828 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69.1 pTM=0.394 ipTM=0.155 tol=2.04 2024-07-28 22:40:05,755 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.2 pTM=0.395 ipTM=0.152 tol=1.67 2024-07-28 22:40:30,673 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.1 pTM=0.394 ipTM=0.153 tol=2.54 2024-07-28 22:40:55,548 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68.8 pTM=0.392 ipTM=0.151 tol=1.92 2024-07-28 22:41:20,434 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.9 pTM=0.394 ipTM=0.153 tol=1.81 2024-07-28 22:41:45,321 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.1 pTM=0.394 ipTM=0.151 tol=1.5 2024-07-28 22:42:10,180 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=69.1 pTM=0.395 ipTM=0.152 tol=1.95 2024-07-28 22:42:35,037 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.1 pTM=0.394 ipTM=0.15 tol=2.07 2024-07-28 22:42:59,885 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=69.1 pTM=0.394 ipTM=0.154 tol=2.15 2024-07-28 22:43:24,741 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.3 pTM=0.395 ipTM=0.151 tol=1.69 2024-07-28 22:43:49,602 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.2 pTM=0.394 ipTM=0.154 tol=2.52 2024-07-28 22:44:14,393 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.1 pTM=0.392 ipTM=0.149 tol=1.26 2024-07-28 22:44:39,213 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.2 pTM=0.394 ipTM=0.155 tol=2.32 2024-07-28 22:45:04,012 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.1 pTM=0.393 ipTM=0.152 tol=1.06 2024-07-28 22:45:28,848 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.9 pTM=0.394 ipTM=0.154 tol=2 2024-07-28 22:45:53,653 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.9 pTM=0.393 ipTM=0.148 tol=2.62 2024-07-28 22:45:53,654 alphafold2_multimer_v3_model_1_seed_000 took 989.6s (30 recycles) 2024-07-28 22:46:19,269 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67 pTM=0.394 ipTM=0.141 2024-07-28 22:46:44,108 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.8 pTM=0.396 ipTM=0.145 tol=9.4 2024-07-28 22:47:08,996 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.4 pTM=0.396 ipTM=0.142 tol=4.54 2024-07-28 22:47:33,895 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69.2 pTM=0.399 ipTM=0.149 tol=4.86 2024-07-28 22:47:58,796 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.4 pTM=0.399 ipTM=0.147 tol=2.43 2024-07-28 22:48:23,712 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.2 pTM=0.402 ipTM=0.148 tol=1.73 2024-07-28 22:48:48,638 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.6 pTM=0.403 ipTM=0.152 tol=5.12 2024-07-28 22:49:13,536 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.7 pTM=0.402 ipTM=0.168 tol=8.79 2024-07-28 22:49:38,427 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.3 pTM=0.402 ipTM=0.236 tol=3.1 2024-07-28 22:50:03,336 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.4 pTM=0.403 ipTM=0.244 tol=2.54 2024-07-28 22:50:28,204 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.3 pTM=0.401 ipTM=0.237 tol=3.21 2024-07-28 22:50:53,068 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.5 pTM=0.402 ipTM=0.238 tol=2.58 2024-07-28 22:51:17,926 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.4 pTM=0.402 ipTM=0.243 tol=1.47 2024-07-28 22:51:42,802 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.3 pTM=0.403 ipTM=0.239 tol=1.42 2024-07-28 22:52:07,640 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.1 pTM=0.4 ipTM=0.231 tol=2.84 2024-07-28 22:52:32,533 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.2 pTM=0.401 ipTM=0.232 tol=3.62 2024-07-28 22:52:57,400 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.4 pTM=0.402 ipTM=0.237 tol=4.08 2024-07-28 22:53:22,264 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.3 pTM=0.401 ipTM=0.242 tol=2.29 2024-07-28 22:53:47,118 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.2 pTM=0.401 ipTM=0.244 tol=1.51 2024-07-28 22:54:11,969 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70 pTM=0.402 ipTM=0.254 tol=2.87 2024-07-28 22:54:36,825 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.2 pTM=0.401 ipTM=0.259 tol=3.96 2024-07-28 22:55:01,690 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.3 pTM=0.401 ipTM=0.264 tol=1.39 2024-07-28 22:55:26,533 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.1 pTM=0.402 ipTM=0.265 tol=5.07 2024-07-28 22:55:51,381 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.4 pTM=0.401 ipTM=0.26 tol=2.46 2024-07-28 22:56:16,216 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.1 pTM=0.4 ipTM=0.261 tol=2.69 2024-07-28 22:56:41,076 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70.1 pTM=0.401 ipTM=0.269 tol=3.98 2024-07-28 22:57:05,927 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.1 pTM=0.402 ipTM=0.257 tol=3.26 2024-07-28 22:57:30,763 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=70.2 pTM=0.402 ipTM=0.255 tol=1.02 2024-07-28 22:57:55,598 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.5 pTM=0.401 ipTM=0.258 tol=0.626 2024-07-28 22:58:20,453 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.3 pTM=0.402 ipTM=0.259 tol=2.97 2024-07-28 22:58:45,318 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.1 pTM=0.401 ipTM=0.26 tol=4.26 2024-07-28 22:58:45,319 alphafold2_multimer_v3_model_2_seed_000 took 770.9s (30 recycles) 2024-07-28 22:59:11,100 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=70.7 pTM=0.435 ipTM=0.136 2024-07-28 22:59:36,023 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=71.1 pTM=0.437 ipTM=0.157 tol=11.6 2024-07-28 23:00:00,924 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=72.3 pTM=0.45 ipTM=0.202 tol=7 2024-07-28 23:00:25,834 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=71.3 pTM=0.42 ipTM=0.162 tol=3.12 2024-07-28 23:00:50,785 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=71.3 pTM=0.427 ipTM=0.174 tol=2.32 2024-07-28 23:01:15,736 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=70.8 pTM=0.416 ipTM=0.162 tol=3.78 2024-07-28 23:01:40,656 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.8 pTM=0.417 ipTM=0.177 tol=3.86 2024-07-28 23:02:05,590 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.2 pTM=0.41 ipTM=0.16 tol=11.1 2024-07-28 23:02:30,574 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.6 pTM=0.411 ipTM=0.164 tol=11.5 2024-07-28 23:02:55,520 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=69.8 pTM=0.409 ipTM=0.16 tol=9.8 2024-07-28 23:03:20,495 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.2 pTM=0.41 ipTM=0.165 tol=8.76 2024-07-28 23:03:45,462 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.4 pTM=0.403 ipTM=0.155 tol=9.29 2024-07-28 23:04:10,446 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70.4 pTM=0.408 ipTM=0.165 tol=10.1 2024-07-28 23:04:35,406 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=69.2 pTM=0.406 ipTM=0.16 tol=8.54 2024-07-28 23:05:00,347 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=69.9 pTM=0.409 ipTM=0.172 tol=7.91 2024-07-28 23:05:25,344 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=69.1 pTM=0.403 ipTM=0.155 tol=9.7 2024-07-28 23:05:50,333 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=69.8 pTM=0.405 ipTM=0.161 tol=8.72 2024-07-28 23:06:15,334 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=69.1 pTM=0.401 ipTM=0.155 tol=8.59 2024-07-28 23:06:40,325 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=69.8 pTM=0.404 ipTM=0.16 tol=7.61 2024-07-28 23:07:05,318 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.4 pTM=0.402 ipTM=0.156 tol=5.73 2024-07-28 23:07:30,279 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=69.8 pTM=0.409 ipTM=0.169 tol=8.89 2024-07-28 23:07:55,265 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=69.5 pTM=0.403 ipTM=0.155 tol=9.89 2024-07-28 23:08:20,230 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=69.5 pTM=0.406 ipTM=0.161 tol=8.49 2024-07-28 23:08:45,208 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=68.9 pTM=0.402 ipTM=0.153 tol=8 2024-07-28 23:09:10,187 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70 pTM=0.408 ipTM=0.165 tol=8.62 2024-07-28 23:09:35,201 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=69.2 pTM=0.402 ipTM=0.153 tol=9.16 2024-07-28 23:10:00,174 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=69.8 pTM=0.408 ipTM=0.165 tol=8.73 2024-07-28 23:10:25,154 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=69.1 pTM=0.404 ipTM=0.157 tol=8.23 2024-07-28 23:10:50,119 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70 pTM=0.41 ipTM=0.169 tol=7.92 2024-07-28 23:11:15,074 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=69.2 pTM=0.405 ipTM=0.16 tol=8.09 2024-07-28 23:11:40,002 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=69.8 pTM=0.408 ipTM=0.167 tol=8.58 2024-07-28 23:11:40,003 alphafold2_multimer_v3_model_3_seed_000 took 773.9s (30 recycles) 2024-07-28 23:12:05,633 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=70.6 pTM=0.408 ipTM=0.152 2024-07-28 23:12:30,545 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.2 pTM=0.412 ipTM=0.17 tol=9.57 2024-07-28 23:12:55,450 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=72 pTM=0.419 ipTM=0.173 tol=6.04 2024-07-28 23:13:20,360 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=71.5 pTM=0.42 ipTM=0.164 tol=5.27 2024-07-28 23:13:45,275 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.5 pTM=0.427 ipTM=0.165 tol=5.64 2024-07-28 23:14:10,209 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=71.4 pTM=0.435 ipTM=0.167 tol=4.93 2024-07-28 23:14:35,110 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.9 pTM=0.429 ipTM=0.168 tol=5.48 2024-07-28 23:15:00,006 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.3 pTM=0.435 ipTM=0.165 tol=1.98 2024-07-28 23:15:24,897 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.8 pTM=0.43 ipTM=0.168 tol=2.49 2024-07-28 23:15:49,782 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.9 pTM=0.43 ipTM=0.165 tol=3.4 2024-07-28 23:16:14,694 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=71 pTM=0.423 ipTM=0.165 tol=3.25 2024-07-28 23:16:39,610 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=71.3 pTM=0.426 ipTM=0.164 tol=3.18 2024-07-28 23:17:04,503 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=71 pTM=0.425 ipTM=0.167 tol=4.75 2024-07-28 23:17:29,417 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=71.1 pTM=0.43 ipTM=0.168 tol=3.61 2024-07-28 23:17:54,305 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=71 pTM=0.428 ipTM=0.168 tol=3.49 2024-07-28 23:18:19,223 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=71.2 pTM=0.43 ipTM=0.167 tol=3.72 2024-07-28 23:18:44,118 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.8 pTM=0.429 ipTM=0.167 tol=4.01 2024-07-28 23:19:09,022 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=71.1 pTM=0.428 ipTM=0.169 tol=4.09 2024-07-28 23:19:33,919 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.8 pTM=0.425 ipTM=0.165 tol=3 2024-07-28 23:19:58,825 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=71 pTM=0.428 ipTM=0.168 tol=3.48 2024-07-28 23:20:23,746 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.9 pTM=0.428 ipTM=0.169 tol=3.21 2024-07-28 23:20:48,667 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=71.1 pTM=0.429 ipTM=0.169 tol=4.18 2024-07-28 23:21:13,557 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.9 pTM=0.426 ipTM=0.166 tol=3.37 2024-07-28 23:21:38,460 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=71.4 pTM=0.43 ipTM=0.168 tol=3.54 2024-07-28 23:22:03,364 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=71.1 pTM=0.431 ipTM=0.166 tol=4.31 2024-07-28 23:22:28,290 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.2 pTM=0.434 ipTM=0.169 tol=4.18 2024-07-28 23:22:53,178 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.8 pTM=0.428 ipTM=0.169 tol=3.72 2024-07-28 23:23:18,094 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.9 pTM=0.431 ipTM=0.17 tol=3.75 2024-07-28 23:23:43,002 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.8 pTM=0.426 ipTM=0.166 tol=4.09 2024-07-28 23:24:07,935 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=71 pTM=0.43 ipTM=0.169 tol=4.32 2024-07-28 23:24:32,851 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.9 pTM=0.429 ipTM=0.168 tol=3.3 2024-07-28 23:24:32,852 alphafold2_multimer_v3_model_4_seed_000 took 772.1s (30 recycles) 2024-07-28 23:24:58,562 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=71.4 pTM=0.408 ipTM=0.162 2024-07-28 23:25:23,505 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=71 pTM=0.41 ipTM=0.156 tol=11 2024-07-28 23:25:48,447 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=70.7 pTM=0.419 ipTM=0.184 tol=7.58 2024-07-28 23:26:13,393 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=70 pTM=0.416 ipTM=0.176 tol=4.72 2024-07-28 23:26:38,328 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.5 pTM=0.412 ipTM=0.171 tol=2.22 2024-07-28 23:27:03,293 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.6 pTM=0.413 ipTM=0.173 tol=2.58 2024-07-28 23:27:28,255 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.1 pTM=0.41 ipTM=0.17 tol=2.63 2024-07-28 23:27:53,234 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.4 pTM=0.411 ipTM=0.176 tol=2.89 2024-07-28 23:28:18,208 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69 pTM=0.409 ipTM=0.169 tol=3.92 2024-07-28 23:28:43,186 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=69.2 pTM=0.411 ipTM=0.172 tol=2.95 2024-07-28 23:29:08,148 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=69.2 pTM=0.411 ipTM=0.17 tol=2.3 2024-07-28 23:29:33,108 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=69.2 pTM=0.412 ipTM=0.171 tol=2.4 2024-07-28 23:29:58,046 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=69.2 pTM=0.412 ipTM=0.169 tol=2.16 2024-07-28 23:30:23,022 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=69.1 pTM=0.413 ipTM=0.172 tol=2.42 2024-07-28 23:30:47,960 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=69.2 pTM=0.41 ipTM=0.166 tol=2.45 2024-07-28 23:31:12,921 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=69 pTM=0.411 ipTM=0.171 tol=2.28 2024-07-28 23:31:37,863 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=69 pTM=0.411 ipTM=0.166 tol=2.54 2024-07-28 23:32:02,817 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=69.1 pTM=0.411 ipTM=0.171 tol=2.32 2024-07-28 23:32:27,764 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=69 pTM=0.411 ipTM=0.167 tol=1.84 2024-07-28 23:32:52,735 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=69 pTM=0.414 ipTM=0.175 tol=2.03 2024-07-28 23:33:17,701 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=69.1 pTM=0.413 ipTM=0.17 tol=2.58 2024-07-28 23:33:42,663 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.9 pTM=0.411 ipTM=0.169 tol=2.85 2024-07-28 23:34:07,629 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.9 pTM=0.41 ipTM=0.166 tol=2.23 2024-07-28 23:34:32,590 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=69 pTM=0.411 ipTM=0.17 tol=2.03 2024-07-28 23:34:57,544 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=69.1 pTM=0.411 ipTM=0.167 tol=2.99 2024-07-28 23:35:22,522 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=69 pTM=0.411 ipTM=0.17 tol=6.34 2024-07-28 23:35:47,481 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=69.1 pTM=0.41 ipTM=0.168 tol=2.11 2024-07-28 23:36:12,439 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=69.1 pTM=0.411 ipTM=0.171 tol=5.88 2024-07-28 23:36:37,404 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=69.1 pTM=0.411 ipTM=0.171 tol=2.48 2024-07-28 23:37:02,370 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.9 pTM=0.413 ipTM=0.172 tol=2.07 2024-07-28 23:37:27,310 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.9 pTM=0.41 ipTM=0.167 tol=2.94 2024-07-28 23:37:27,311 alphafold2_multimer_v3_model_5_seed_000 took 773.7s (30 recycles) 2024-07-28 23:37:28,043 reranking models by 'multimer' metric 2024-07-28 23:37:29,187 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-28 23:39:36,532 Relaxation took 128.5s 2024-07-28 23:39:36,532 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.1 pTM=0.401 ipTM=0.26 2024-07-28 23:42:39,061 Relaxation took 182.5s 2024-07-28 23:42:39,062 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.9 pTM=0.429 ipTM=0.168 2024-07-28 23:46:01,675 Relaxation took 202.6s 2024-07-28 23:46:01,675 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.9 pTM=0.41 ipTM=0.167 2024-07-28 23:48:53,927 Relaxation took 172.3s 2024-07-28 23:48:53,928 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=69.8 pTM=0.408 ipTM=0.167 2024-07-28 23:51:05,814 Relaxation took 131.9s 2024-07-28 23:51:05,814 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.9 pTM=0.393 ipTM=0.148 2024-07-28 23:51:07,891 Done