2024-07-28 22:26:44,135 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 22:26:45,486 Running on GPU
2024-07-28 22:26:49,751 Found 6 citations for tools or databases
2024-07-28 22:26:49,752 Query 1/1: ZNF696_RAB40AL (length 652)
2024-07-28 22:26:50,298 Sleeping for 10s. Reason: PENDING
2024-07-28 22:27:00,748 Sleeping for 5s. Reason: RUNNING
2024-07-28 22:27:06,182 Sleeping for 5s. Reason: RUNNING
2024-07-28 22:27:11,617 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:27:22,059 Sleeping for 8s. Reason: RUNNING
2024-07-28 22:27:30,488 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:27:40,903 Sleeping for 7s. Reason: RUNNING
2024-07-28 22:27:48,324 Sleeping for 5s. Reason: RUNNING
2024-07-28 22:27:53,739 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:28:04,166 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:28:14,604 Sleeping for 5s. Reason: RUNNING
2024-07-28 22:28:20,020 Sleeping for 7s. Reason: RUNNING
2024-07-28 22:28:27,440 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:28:37,858 Sleeping for 7s. Reason: RUNNING
2024-07-28 22:28:45,293 Sleeping for 9s. Reason: RUNNING
2024-07-28 22:28:54,707 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:29:05,132 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:29:17,472 Sleeping for 9s. Reason: PENDING
2024-07-28 22:29:26,879 Sleeping for 7s. Reason: RUNNING
2024-07-28 22:29:34,321 Sleeping for 6s. Reason: RUNNING
2024-07-28 22:29:40,758 Sleeping for 6s. Reason: RUNNING
2024-07-28 22:29:47,199 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:29:57,629 Sleeping for 8s. Reason: RUNNING
2024-07-28 22:30:06,047 Sleeping for 5s. Reason: RUNNING
2024-07-28 22:30:11,464 Sleeping for 6s. Reason: RUNNING
2024-07-28 22:30:17,894 Sleeping for 10s. Reason: RUNNING
2024-07-28 22:30:32,143 Setting max_seq=508, max_extra_seq=2048
2024-07-28 22:33:56,699 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=52.8 pTM=0.339 ipTM=0.205
2024-07-28 22:34:08,253 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.3 pTM=0.332 ipTM=0.157 tol=6.81
2024-07-28 22:34:19,798 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.8 pTM=0.327 ipTM=0.154 tol=4.3
2024-07-28 22:34:31,359 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.8 pTM=0.327 ipTM=0.148 tol=2.55
2024-07-28 22:34:42,918 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.7 pTM=0.327 ipTM=0.147 tol=3.15
2024-07-28 22:34:54,487 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54.8 pTM=0.327 ipTM=0.147 tol=2.9
2024-07-28 22:35:06,064 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=55.1 pTM=0.327 ipTM=0.144 tol=2.6
2024-07-28 22:35:17,651 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=55.1 pTM=0.327 ipTM=0.138 tol=2.06
2024-07-28 22:35:29,233 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.9 pTM=0.328 ipTM=0.138 tol=2.91
2024-07-28 22:35:40,818 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=54.4 pTM=0.326 ipTM=0.136 tol=2.39
2024-07-28 22:35:52,404 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.6 pTM=0.325 ipTM=0.14 tol=1.16
2024-07-28 22:36:03,996 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=54.5 pTM=0.327 ipTM=0.14 tol=2.16
2024-07-28 22:36:15,592 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=54.8 pTM=0.326 ipTM=0.141 tol=2.26
2024-07-28 22:36:27,193 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.4 pTM=0.327 ipTM=0.138 tol=2.16
2024-07-28 22:36:38,798 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.2 pTM=0.327 ipTM=0.138 tol=2.02
2024-07-28 22:36:50,408 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=54 pTM=0.327 ipTM=0.139 tol=1.26
2024-07-28 22:37:02,017 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=54.2 pTM=0.327 ipTM=0.139 tol=1.54
2024-07-28 22:37:13,626 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=54.5 pTM=0.327 ipTM=0.14 tol=1.96
2024-07-28 22:37:25,233 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=54.2 pTM=0.326 ipTM=0.137 tol=1.69
2024-07-28 22:37:36,841 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.7 pTM=0.325 ipTM=0.139 tol=2.34
2024-07-28 22:37:48,440 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53.7 pTM=0.325 ipTM=0.14 tol=2.01
2024-07-28 22:38:00,048 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.7 pTM=0.327 ipTM=0.141 tol=1.25
2024-07-28 22:38:11,653 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=54 pTM=0.327 ipTM=0.139 tol=1.82
2024-07-28 22:38:23,258 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.6 pTM=0.326 ipTM=0.141 tol=1.79
2024-07-28 22:38:34,863 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.8 pTM=0.328 ipTM=0.141 tol=1.93
2024-07-28 22:38:46,467 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=54.1 pTM=0.328 ipTM=0.141 tol=1.89
2024-07-28 22:38:58,071 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54 pTM=0.327 ipTM=0.14 tol=1.11
2024-07-28 22:39:09,679 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.9 pTM=0.327 ipTM=0.138 tol=1.47
2024-07-28 22:39:21,282 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.8 pTM=0.326 ipTM=0.14 tol=1.6
2024-07-28 22:39:32,890 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.5 pTM=0.326 ipTM=0.14 tol=1.23
2024-07-28 22:39:44,493 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.6 pTM=0.327 ipTM=0.144 tol=1.19
2024-07-28 22:39:44,493 alphafold2_multimer_v3_model_1_seed_000 took 531.5s (30 recycles)
2024-07-28 22:39:56,493 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.4 pTM=0.338 ipTM=0.16
2024-07-28 22:40:08,120 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.9 pTM=0.332 ipTM=0.158 tol=5.56
2024-07-28 22:40:19,745 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53 pTM=0.328 ipTM=0.154 tol=4.29
2024-07-28 22:40:31,375 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.5 pTM=0.328 ipTM=0.152 tol=1.72
2024-07-28 22:40:43,010 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.7 pTM=0.33 ipTM=0.148 tol=1.64
2024-07-28 22:40:54,648 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.8 pTM=0.328 ipTM=0.147 tol=1.85
2024-07-28 22:41:06,281 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54 pTM=0.329 ipTM=0.145 tol=2
2024-07-28 22:41:17,915 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.6 pTM=0.327 ipTM=0.141 tol=2.19
2024-07-28 22:41:29,549 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.5 pTM=0.327 ipTM=0.141 tol=2.33
2024-07-28 22:41:41,178 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.3 pTM=0.327 ipTM=0.141 tol=3.03
2024-07-28 22:41:52,810 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.5 pTM=0.326 ipTM=0.141 tol=3.96
2024-07-28 22:42:04,439 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.5 pTM=0.328 ipTM=0.143 tol=3.39
2024-07-28 22:42:16,068 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.5 pTM=0.327 ipTM=0.144 tol=3.04
2024-07-28 22:42:27,692 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.3 pTM=0.327 ipTM=0.141 tol=3.74
2024-07-28 22:42:39,319 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.3 pTM=0.327 ipTM=0.143 tol=3.28
2024-07-28 22:42:50,954 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.8 pTM=0.327 ipTM=0.146 tol=4
2024-07-28 22:43:02,580 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.5 pTM=0.326 ipTM=0.144 tol=3.87
2024-07-28 22:43:14,209 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.4 pTM=0.328 ipTM=0.147 tol=3.89
2024-07-28 22:43:25,827 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.9 pTM=0.327 ipTM=0.145 tol=2
2024-07-28 22:43:37,449 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.8 pTM=0.328 ipTM=0.148 tol=2.09
2024-07-28 22:43:49,072 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.6 pTM=0.327 ipTM=0.149 tol=1.81
2024-07-28 22:44:00,700 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54 pTM=0.329 ipTM=0.152 tol=2.69
2024-07-28 22:44:12,335 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54.4 pTM=0.329 ipTM=0.152 tol=2.55
2024-07-28 22:44:23,970 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.3 pTM=0.329 ipTM=0.157 tol=3
2024-07-28 22:44:35,606 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.2 pTM=0.33 ipTM=0.158 tol=4.39
2024-07-28 22:44:47,240 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.4 pTM=0.33 ipTM=0.156 tol=4.85
2024-07-28 22:44:58,870 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.7 pTM=0.33 ipTM=0.158 tol=2.56
2024-07-28 22:45:10,500 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.3 pTM=0.33 ipTM=0.157 tol=2.68
2024-07-28 22:45:22,125 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.8 pTM=0.328 ipTM=0.159 tol=2.15
2024-07-28 22:45:33,753 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.9 pTM=0.328 ipTM=0.159 tol=3.13
2024-07-28 22:45:45,378 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.8 pTM=0.328 ipTM=0.158 tol=5.06
2024-07-28 22:45:45,379 alphafold2_multimer_v3_model_2_seed_000 took 360.5s (30 recycles)
2024-07-28 22:45:57,457 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.2 pTM=0.33 ipTM=0.157
2024-07-28 22:46:09,139 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.5 pTM=0.328 ipTM=0.124 tol=4.78
2024-07-28 22:46:20,822 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.1 pTM=0.33 ipTM=0.116 tol=4.72
2024-07-28 22:46:32,505 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=54.3 pTM=0.326 ipTM=0.113 tol=2.31
2024-07-28 22:46:44,197 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.2 pTM=0.327 ipTM=0.113 tol=3.2
2024-07-28 22:46:55,884 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=53.8 pTM=0.326 ipTM=0.112 tol=2.13
2024-07-28 22:47:07,573 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.2 pTM=0.327 ipTM=0.111 tol=4.2
2024-07-28 22:47:19,267 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=53.9 pTM=0.327 ipTM=0.114 tol=4.24
2024-07-28 22:47:30,965 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.1 pTM=0.327 ipTM=0.113 tol=1.54
2024-07-28 22:47:42,657 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54 pTM=0.328 ipTM=0.117 tol=1.9
2024-07-28 22:47:54,353 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.2 pTM=0.326 ipTM=0.115 tol=2.79
2024-07-28 22:48:06,047 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=53.8 pTM=0.327 ipTM=0.116 tol=2.79
2024-07-28 22:48:17,742 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.1 pTM=0.326 ipTM=0.115 tol=1.4
2024-07-28 22:48:29,439 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54 pTM=0.326 ipTM=0.116 tol=1.81
2024-07-28 22:48:41,138 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.4 pTM=0.327 ipTM=0.116 tol=2.09
2024-07-28 22:48:52,838 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.2 pTM=0.326 ipTM=0.118 tol=1.78
2024-07-28 22:49:04,533 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54 pTM=0.326 ipTM=0.114 tol=2.03
2024-07-28 22:49:16,228 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.5 pTM=0.329 ipTM=0.118 tol=2.41
2024-07-28 22:49:27,921 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54 pTM=0.327 ipTM=0.119 tol=1.48
2024-07-28 22:49:39,614 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.5 pTM=0.327 ipTM=0.117 tol=1.94
2024-07-28 22:49:51,301 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.6 pTM=0.326 ipTM=0.12 tol=1.89
2024-07-28 22:50:02,987 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.2 pTM=0.328 ipTM=0.12 tol=2.01
2024-07-28 22:50:14,674 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.7 pTM=0.332 ipTM=0.118 tol=2.02
2024-07-28 22:50:26,366 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.5 pTM=0.329 ipTM=0.117 tol=2.65
2024-07-28 22:50:38,051 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54 pTM=0.328 ipTM=0.119 tol=1.78
2024-07-28 22:50:49,730 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.3 pTM=0.328 ipTM=0.118 tol=2.04
2024-07-28 22:51:01,406 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.1 pTM=0.327 ipTM=0.118 tol=2.26
2024-07-28 22:51:13,089 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.1 pTM=0.328 ipTM=0.117 tol=2.16
2024-07-28 22:51:24,773 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54 pTM=0.328 ipTM=0.117 tol=1.22
2024-07-28 22:51:36,453 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.8 pTM=0.327 ipTM=0.117 tol=3.33
2024-07-28 22:51:48,140 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.3 pTM=0.329 ipTM=0.117 tol=1.86
2024-07-28 22:51:48,141 alphafold2_multimer_v3_model_3_seed_000 took 362.4s (30 recycles)
2024-07-28 22:52:00,187 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.4 pTM=0.34 ipTM=0.217
2024-07-28 22:52:11,826 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.7 pTM=0.328 ipTM=0.158 tol=10.5
2024-07-28 22:52:23,460 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.1 pTM=0.327 ipTM=0.143 tol=5.34
2024-07-28 22:52:35,106 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.6 pTM=0.325 ipTM=0.13 tol=3.34
2024-07-28 22:52:46,753 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.6 pTM=0.327 ipTM=0.133 tol=1.7
2024-07-28 22:52:58,399 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.1 pTM=0.327 ipTM=0.134 tol=2.62
2024-07-28 22:53:10,050 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.7 pTM=0.328 ipTM=0.13 tol=4.13
2024-07-28 22:53:21,709 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.8 pTM=0.328 ipTM=0.141 tol=5.89
2024-07-28 22:53:33,357 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.9 pTM=0.328 ipTM=0.142 tol=6.47
2024-07-28 22:53:45,005 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57 pTM=0.327 ipTM=0.141 tol=2.72
2024-07-28 22:53:56,651 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.2 pTM=0.327 ipTM=0.142 tol=2.53
2024-07-28 22:54:08,307 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.1 pTM=0.326 ipTM=0.14 tol=4.74
2024-07-28 22:54:19,962 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.1 pTM=0.327 ipTM=0.139 tol=4.68
2024-07-28 22:54:31,617 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.2 pTM=0.327 ipTM=0.142 tol=2.12
2024-07-28 22:54:43,273 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.7 pTM=0.329 ipTM=0.14 tol=5.79
2024-07-28 22:54:54,926 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.4 pTM=0.329 ipTM=0.139 tol=4.98
2024-07-28 22:55:06,578 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.3 pTM=0.331 ipTM=0.143 tol=4.41
2024-07-28 22:55:18,240 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.8 pTM=0.33 ipTM=0.138 tol=4.66
2024-07-28 22:55:29,892 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.5 pTM=0.331 ipTM=0.147 tol=2.92
2024-07-28 22:55:41,546 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.4 pTM=0.329 ipTM=0.141 tol=1.91
2024-07-28 22:55:53,193 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.7 pTM=0.328 ipTM=0.144 tol=2.28
2024-07-28 22:56:04,852 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.9 pTM=0.327 ipTM=0.142 tol=2.78
2024-07-28 22:56:16,506 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57 pTM=0.328 ipTM=0.141 tol=2.67
2024-07-28 22:56:28,168 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.7 pTM=0.326 ipTM=0.144 tol=3.15
2024-07-28 22:56:39,824 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.4 pTM=0.328 ipTM=0.142 tol=5.16
2024-07-28 22:56:51,486 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=56.8 pTM=0.326 ipTM=0.142 tol=4.14
2024-07-28 22:57:03,141 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.4 pTM=0.329 ipTM=0.14 tol=4.05
2024-07-28 22:57:14,797 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57 pTM=0.327 ipTM=0.14 tol=4.77
2024-07-28 22:57:26,444 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.9 pTM=0.328 ipTM=0.138 tol=2.54
2024-07-28 22:57:38,101 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.7 pTM=0.326 ipTM=0.143 tol=3.02
2024-07-28 22:57:49,756 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.1 pTM=0.329 ipTM=0.139 tol=4.51
2024-07-28 22:57:49,756 alphafold2_multimer_v3_model_4_seed_000 took 361.2s (30 recycles)
2024-07-28 22:58:01,826 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.4 pTM=0.328 ipTM=0.186
2024-07-28 22:58:13,515 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.8 pTM=0.324 ipTM=0.14 tol=11.5
2024-07-28 22:58:25,211 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55 pTM=0.325 ipTM=0.113 tol=6.82
2024-07-28 22:58:36,912 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.2 pTM=0.326 ipTM=0.11 tol=7.23
2024-07-28 22:58:48,618 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.3 pTM=0.328 ipTM=0.112 tol=7.49
2024-07-28 22:59:00,316 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55 pTM=0.329 ipTM=0.112 tol=5.03
2024-07-28 22:59:12,014 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.6 pTM=0.33 ipTM=0.117 tol=9.02
2024-07-28 22:59:23,711 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.6 pTM=0.328 ipTM=0.114 tol=7.33
2024-07-28 22:59:35,420 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.3 pTM=0.327 ipTM=0.112 tol=8.03
2024-07-28 22:59:47,118 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.9 pTM=0.328 ipTM=0.114 tol=5.54
2024-07-28 22:59:58,809 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=55.2 pTM=0.33 ipTM=0.117 tol=6.24
2024-07-28 23:00:10,501 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=55 pTM=0.33 ipTM=0.116 tol=6.02
2024-07-28 23:00:22,187 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=55.4 pTM=0.333 ipTM=0.121 tol=4.16
2024-07-28 23:00:33,867 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.1 pTM=0.334 ipTM=0.123 tol=4.37
2024-07-28 23:00:45,541 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=55.7 pTM=0.336 ipTM=0.129 tol=4.98
2024-07-28 23:00:57,223 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=55.3 pTM=0.337 ipTM=0.128 tol=3.29
2024-07-28 23:01:08,901 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.6 pTM=0.339 ipTM=0.134 tol=3.06
2024-07-28 23:01:20,572 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.6 pTM=0.339 ipTM=0.13 tol=3.75
2024-07-28 23:01:32,242 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.6 pTM=0.341 ipTM=0.139 tol=4
2024-07-28 23:01:43,917 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.8 pTM=0.336 ipTM=0.13 tol=2.87
2024-07-28 23:01:55,593 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.4 pTM=0.342 ipTM=0.143 tol=2.93
2024-07-28 23:02:07,276 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.4 pTM=0.338 ipTM=0.131 tol=5.8
2024-07-28 23:02:18,948 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.6 pTM=0.343 ipTM=0.144 tol=4.02
2024-07-28 23:02:30,625 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.3 pTM=0.336 ipTM=0.129 tol=4.73
2024-07-28 23:02:42,306 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=55.5 pTM=0.34 ipTM=0.139 tol=2.36
2024-07-28 23:02:53,990 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.7 pTM=0.339 ipTM=0.13 tol=2.78
2024-07-28 23:03:05,671 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56 pTM=0.342 ipTM=0.147 tol=5.09
2024-07-28 23:03:17,357 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=55.3 pTM=0.337 ipTM=0.129 tol=4.84
2024-07-28 23:03:29,033 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=55.7 pTM=0.34 ipTM=0.14 tol=3.24
2024-07-28 23:03:40,715 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.4 pTM=0.335 ipTM=0.123 tol=3.96
2024-07-28 23:03:52,394 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.7 pTM=0.34 ipTM=0.139 tol=5.92
2024-07-28 23:03:52,394 alphafold2_multimer_v3_model_5_seed_000 took 362.2s (30 recycles)
2024-07-28 23:03:52,792 reranking models by 'multimer' metric
2024-07-28 23:03:55,544 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-28 23:05:31,078 Relaxation took 98.3s
2024-07-28 23:05:31,078 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.8 pTM=0.328 ipTM=0.158
2024-07-28 23:06:45,055 Relaxation took 74.0s
2024-07-28 23:06:45,055 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.6 pTM=0.327 ipTM=0.144
2024-07-28 23:07:49,866 Relaxation took 64.8s
2024-07-28 23:07:49,867 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.7 pTM=0.34 ipTM=0.139
2024-07-28 23:09:11,194 Relaxation took 81.3s
2024-07-28 23:09:11,194 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.1 pTM=0.329 ipTM=0.139
2024-07-28 23:10:23,490 Relaxation took 72.3s
2024-07-28 23:10:23,490 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.3 pTM=0.329 ipTM=0.117
2024-07-28 23:10:25,071 Done