2024-07-28 23:54:18,041 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-28 23:54:18,388 Running on GPU
2024-07-28 23:54:21,163 Found 6 citations for tools or databases
2024-07-28 23:54:21,163 Query 1/1: ZNF746_SKP2 (length 1070)
2024-07-28 23:54:21,600 Sleeping for 7s. Reason: PENDING
2024-07-28 23:54:29,709 Sleeping for 7s. Reason: RUNNING
2024-07-28 23:54:37,140 Sleeping for 10s. Reason: RUNNING
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2024-07-28 23:54:59,383 Sleeping for 5s. Reason: RUNNING
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2024-07-28 23:55:11,266 Sleeping for 7s. Reason: RUNNING
2024-07-28 23:55:18,679 Sleeping for 5s. Reason: RUNNING
2024-07-28 23:55:24,101 Sleeping for 5s. Reason: RUNNING
2024-07-28 23:55:29,507 Sleeping for 6s. Reason: RUNNING
2024-07-28 23:55:35,951 Sleeping for 8s. Reason: RUNNING
2024-07-28 23:55:44,380 Sleeping for 10s. Reason: RUNNING
2024-07-28 23:55:54,820 Sleeping for 5s. Reason: RUNNING
2024-07-28 23:56:00,236 Sleeping for 5s. Reason: RUNNING
2024-07-28 23:56:05,654 Sleeping for 7s. Reason: RUNNING
2024-07-28 23:56:13,077 Sleeping for 5s. Reason: RUNNING
2024-07-28 23:56:18,479 Sleeping for 6s. Reason: RUNNING
2024-07-28 23:56:24,888 Sleeping for 10s. Reason: RUNNING
2024-07-28 23:56:35,323 Sleeping for 5s. Reason: RUNNING
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2024-07-28 23:56:46,153 Sleeping for 9s. Reason: RUNNING
2024-07-28 23:56:55,581 Sleeping for 10s. Reason: RUNNING
2024-07-28 23:57:07,686 Sleeping for 8s. Reason: PENDING
2024-07-28 23:57:16,093 Sleeping for 9s. Reason: RUNNING
2024-07-28 23:57:25,526 Sleeping for 5s. Reason: RUNNING
2024-07-28 23:57:30,933 Sleeping for 5s. Reason: RUNNING
2024-07-28 23:57:36,363 Sleeping for 7s. Reason: RUNNING
2024-07-28 23:57:43,780 Sleeping for 9s. Reason: RUNNING
2024-07-28 23:57:53,203 Sleeping for 7s. Reason: RUNNING
2024-07-28 23:58:00,629 Sleeping for 9s. Reason: RUNNING
2024-07-28 23:58:10,046 Sleeping for 7s. Reason: RUNNING
2024-07-28 23:58:17,476 Sleeping for 7s. Reason: RUNNING
2024-07-28 23:58:24,887 Sleeping for 9s. Reason: RUNNING
2024-07-28 23:58:38,019 Setting max_seq=508, max_extra_seq=2048
2024-07-29 00:02:30,364 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.5 pTM=0.4 ipTM=0.181
2024-07-29 00:03:00,125 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.8 pTM=0.397 ipTM=0.208 tol=15.3
2024-07-29 00:03:30,004 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.9 pTM=0.398 ipTM=0.275 tol=8.16
2024-07-29 00:03:59,970 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=45.8 pTM=0.397 ipTM=0.264 tol=6.91
2024-07-29 00:04:29,981 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=45.7 pTM=0.399 ipTM=0.233 tol=7.28
2024-07-29 00:05:00,002 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=45.9 pTM=0.4 ipTM=0.274 tol=6.25
2024-07-29 00:05:30,020 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.1 pTM=0.411 ipTM=0.288 tol=3.6
2024-07-29 00:06:00,046 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.5 pTM=0.412 ipTM=0.292 tol=3.53
2024-07-29 00:06:30,089 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.7 pTM=0.417 ipTM=0.335 tol=3.04
2024-07-29 00:07:00,120 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.4 pTM=0.415 ipTM=0.318 tol=3.94
2024-07-29 00:07:30,160 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.8 pTM=0.426 ipTM=0.381 tol=2.75
2024-07-29 00:08:00,211 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.8 pTM=0.425 ipTM=0.37 tol=3.82
2024-07-29 00:08:30,265 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47 pTM=0.428 ipTM=0.389 tol=4.68
2024-07-29 00:09:00,315 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.7 pTM=0.422 ipTM=0.339 tol=3.6
2024-07-29 00:09:30,368 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.8 pTM=0.422 ipTM=0.356 tol=4.26
2024-07-29 00:10:00,430 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.6 pTM=0.418 ipTM=0.31 tol=3.73
2024-07-29 00:10:30,483 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.6 pTM=0.419 ipTM=0.328 tol=3.06
2024-07-29 00:11:00,521 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=46.5 pTM=0.419 ipTM=0.328 tol=4.12
2024-07-29 00:11:30,555 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.7 pTM=0.422 ipTM=0.346 tol=2.62
2024-07-29 00:12:00,592 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.7 pTM=0.423 ipTM=0.351 tol=2.31
2024-07-29 00:12:30,632 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46.9 pTM=0.425 ipTM=0.374 tol=2.26
2024-07-29 00:13:00,668 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=46.7 pTM=0.421 ipTM=0.338 tol=1.91
2024-07-29 00:13:30,708 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.8 pTM=0.424 ipTM=0.357 tol=1.68
2024-07-29 00:14:00,739 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=46.6 pTM=0.419 ipTM=0.312 tol=1.79
2024-07-29 00:14:30,775 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.9 pTM=0.426 ipTM=0.382 tol=1.25
2024-07-29 00:15:00,810 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.7 pTM=0.419 ipTM=0.321 tol=1.69
2024-07-29 00:15:30,828 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.8 pTM=0.423 ipTM=0.341 tol=1.89
2024-07-29 00:16:00,829 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.6 pTM=0.417 ipTM=0.299 tol=1.61
2024-07-29 00:16:30,824 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.8 pTM=0.421 ipTM=0.34 tol=1.62
2024-07-29 00:17:00,840 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.8 pTM=0.422 ipTM=0.34 tol=2.09
2024-07-29 00:17:30,843 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=46.7 pTM=0.423 ipTM=0.357 tol=1.93
2024-07-29 00:17:30,844 alphafold2_multimer_v3_model_1_seed_000 took 1127.2s (30 recycles)
2024-07-29 00:18:01,710 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.2 pTM=0.392 ipTM=0.146
2024-07-29 00:18:31,761 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=47.1 pTM=0.419 ipTM=0.391 tol=11.4
2024-07-29 00:19:01,827 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.1 pTM=0.408 ipTM=0.281 tol=10.3
2024-07-29 00:19:31,906 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=47.2 pTM=0.401 ipTM=0.249 tol=7.86
2024-07-29 00:20:02,013 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=47.2 pTM=0.4 ipTM=0.245 tol=6.52
2024-07-29 00:20:32,114 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.2 pTM=0.396 ipTM=0.22 tol=4.17
2024-07-29 00:21:02,223 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.1 pTM=0.401 ipTM=0.266 tol=3.28
2024-07-29 00:21:32,349 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47 pTM=0.396 ipTM=0.204 tol=3.75
2024-07-29 00:22:02,498 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47 pTM=0.392 ipTM=0.168 tol=4.63
2024-07-29 00:22:32,630 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.9 pTM=0.391 ipTM=0.159 tol=3.08
2024-07-29 00:23:02,753 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=46.9 pTM=0.392 ipTM=0.16 tol=2.47
2024-07-29 00:23:32,891 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=46.9 pTM=0.391 ipTM=0.15 tol=2.99
2024-07-29 00:24:03,026 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.1 pTM=0.392 ipTM=0.154 tol=3.84
2024-07-29 00:24:33,168 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=46.8 pTM=0.392 ipTM=0.153 tol=4.92
2024-07-29 00:25:03,313 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47 pTM=0.392 ipTM=0.149 tol=5.72
2024-07-29 00:25:33,461 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=46.9 pTM=0.392 ipTM=0.148 tol=4.53
2024-07-29 00:26:03,583 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47 pTM=0.392 ipTM=0.151 tol=4.14
2024-07-29 00:26:33,723 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=46.8 pTM=0.391 ipTM=0.151 tol=2.91
2024-07-29 00:27:03,857 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=46.9 pTM=0.392 ipTM=0.157 tol=2.88
2024-07-29 00:27:33,999 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=46.7 pTM=0.392 ipTM=0.152 tol=3.01
2024-07-29 00:28:04,136 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=46.8 pTM=0.392 ipTM=0.155 tol=2.54
2024-07-29 00:28:34,256 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=46.8 pTM=0.392 ipTM=0.158 tol=3.32
2024-07-29 00:29:04,372 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=46.9 pTM=0.392 ipTM=0.155 tol=3.26
2024-07-29 00:29:34,510 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=46.7 pTM=0.392 ipTM=0.153 tol=2.9
2024-07-29 00:30:04,641 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=46.8 pTM=0.392 ipTM=0.15 tol=3.02
2024-07-29 00:30:34,776 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.8 pTM=0.393 ipTM=0.151 tol=2.38
2024-07-29 00:31:04,910 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47 pTM=0.393 ipTM=0.155 tol=2.69
2024-07-29 00:31:35,072 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=46.9 pTM=0.391 ipTM=0.151 tol=4.06
2024-07-29 00:32:05,281 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47 pTM=0.391 ipTM=0.147 tol=3.92
2024-07-29 00:32:35,412 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.8 pTM=0.392 ipTM=0.145 tol=3.86
2024-07-29 00:33:05,539 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.9 pTM=0.391 ipTM=0.143 tol=2.91
2024-07-29 00:33:05,540 alphafold2_multimer_v3_model_2_seed_000 took 933.8s (30 recycles)
2024-07-29 00:33:36,709 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=45.9 pTM=0.395 ipTM=0.17
2024-07-29 00:34:06,970 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=46.6 pTM=0.415 ipTM=0.385 tol=23.8
2024-07-29 00:34:37,245 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=46 pTM=0.391 ipTM=0.186 tol=11.4
2024-07-29 00:35:07,529 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=46.6 pTM=0.4 ipTM=0.224 tol=7.86
2024-07-29 00:35:37,802 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=46.6 pTM=0.393 ipTM=0.217 tol=7.55
2024-07-29 00:36:08,088 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=46.7 pTM=0.397 ipTM=0.223 tol=8.99
2024-07-29 00:36:38,357 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=46.6 pTM=0.396 ipTM=0.248 tol=5.73
2024-07-29 00:37:08,636 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=46.7 pTM=0.397 ipTM=0.238 tol=5.41
2024-07-29 00:37:38,938 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=46.4 pTM=0.389 ipTM=0.186 tol=6.37
2024-07-29 00:38:09,229 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=46.4 pTM=0.397 ipTM=0.217 tol=6.37
2024-07-29 00:38:39,510 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=46.5 pTM=0.395 ipTM=0.23 tol=7.71
2024-07-29 00:39:09,820 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=46.4 pTM=0.395 ipTM=0.233 tol=5.32
2024-07-29 00:39:40,102 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=46.1 pTM=0.392 ipTM=0.195 tol=5.43
2024-07-29 00:40:10,397 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=46 pTM=0.396 ipTM=0.219 tol=4.57
2024-07-29 00:40:40,695 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=46.2 pTM=0.392 ipTM=0.216 tol=3.06
2024-07-29 00:41:10,991 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=46.1 pTM=0.395 ipTM=0.206 tol=3.97
2024-07-29 00:41:41,279 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=46.1 pTM=0.391 ipTM=0.211 tol=3.15
2024-07-29 00:42:11,571 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=46.1 pTM=0.392 ipTM=0.196 tol=3.99
2024-07-29 00:42:41,863 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=45.8 pTM=0.392 ipTM=0.207 tol=1.98
2024-07-29 00:43:12,141 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.7 pTM=0.391 ipTM=0.186 tol=4.57
2024-07-29 00:43:42,420 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.7 pTM=0.395 ipTM=0.214 tol=5.68
2024-07-29 00:44:12,699 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=46 pTM=0.391 ipTM=0.201 tol=3.86
2024-07-29 00:44:42,978 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=46.2 pTM=0.395 ipTM=0.214 tol=2.69
2024-07-29 00:45:13,279 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=46 pTM=0.39 ipTM=0.211 tol=3.22
2024-07-29 00:45:43,573 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=46.2 pTM=0.396 ipTM=0.22 tol=3.06
2024-07-29 00:46:13,862 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.9 pTM=0.388 ipTM=0.179 tol=4.42
2024-07-29 00:46:44,148 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=46.2 pTM=0.396 ipTM=0.205 tol=3.33
2024-07-29 00:47:14,410 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=46 pTM=0.388 ipTM=0.185 tol=4.44
2024-07-29 00:47:44,719 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=46.2 pTM=0.395 ipTM=0.202 tol=4.14
2024-07-29 00:48:15,166 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=46.2 pTM=0.392 ipTM=0.215 tol=5.27
2024-07-29 00:48:45,666 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46.3 pTM=0.396 ipTM=0.23 tol=4.3
2024-07-29 00:48:45,667 alphafold2_multimer_v3_model_3_seed_000 took 939.2s (30 recycles)
2024-07-29 00:49:16,891 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.1 pTM=0.404 ipTM=0.19
2024-07-29 00:49:47,241 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.2 pTM=0.401 ipTM=0.219 tol=20.5
2024-07-29 00:50:17,579 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.8 pTM=0.397 ipTM=0.204 tol=15.1
2024-07-29 00:50:47,888 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=44.9 pTM=0.402 ipTM=0.212 tol=10.5
2024-07-29 00:51:18,174 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45.2 pTM=0.405 ipTM=0.229 tol=8.84
2024-07-29 00:51:48,425 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=45.2 pTM=0.405 ipTM=0.231 tol=9.35
2024-07-29 00:52:18,697 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=45.2 pTM=0.4 ipTM=0.214 tol=5.33
2024-07-29 00:52:48,953 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.1 pTM=0.404 ipTM=0.206 tol=7.2
2024-07-29 00:53:19,229 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.3 pTM=0.396 ipTM=0.198 tol=9.05
2024-07-29 00:53:49,490 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.1 pTM=0.401 ipTM=0.206 tol=7.96
2024-07-29 00:54:19,782 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=44.9 pTM=0.398 ipTM=0.205 tol=13.3
2024-07-29 00:54:50,047 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=45.2 pTM=0.401 ipTM=0.209 tol=11.9
2024-07-29 00:55:20,329 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=45.1 pTM=0.396 ipTM=0.199 tol=8.18
2024-07-29 00:55:50,597 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=45.1 pTM=0.4 ipTM=0.204 tol=7.77
2024-07-29 00:56:20,900 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=45.1 pTM=0.396 ipTM=0.205 tol=10.3
2024-07-29 00:56:51,198 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=45.4 pTM=0.401 ipTM=0.211 tol=9.81
2024-07-29 00:57:21,499 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=45.2 pTM=0.397 ipTM=0.205 tol=6.71
2024-07-29 00:57:51,790 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=45.4 pTM=0.402 ipTM=0.214 tol=4.49
2024-07-29 00:58:22,059 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=45.2 pTM=0.399 ipTM=0.213 tol=5.21
2024-07-29 00:58:52,334 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=45.3 pTM=0.403 ipTM=0.215 tol=6.62
2024-07-29 00:59:22,648 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45.3 pTM=0.401 ipTM=0.227 tol=4.95
2024-07-29 00:59:52,923 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=45.5 pTM=0.403 ipTM=0.218 tol=4.12
2024-07-29 01:00:23,200 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.3 pTM=0.404 ipTM=0.225 tol=5.05
2024-07-29 01:00:53,508 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.3 pTM=0.403 ipTM=0.219 tol=5.37
2024-07-29 01:01:23,803 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.3 pTM=0.402 ipTM=0.225 tol=4.28
2024-07-29 01:01:54,103 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.4 pTM=0.403 ipTM=0.213 tol=4.97
2024-07-29 01:02:24,417 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=45.4 pTM=0.402 ipTM=0.221 tol=6.67
2024-07-29 01:02:54,738 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.7 pTM=0.402 ipTM=0.219 tol=5.47
2024-07-29 01:03:25,059 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=45.3 pTM=0.402 ipTM=0.22 tol=6.8
2024-07-29 01:03:55,348 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=45.3 pTM=0.406 ipTM=0.219 tol=9.52
2024-07-29 01:04:25,633 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=45.3 pTM=0.402 ipTM=0.229 tol=9.35
2024-07-29 01:04:25,634 alphafold2_multimer_v3_model_4_seed_000 took 939.1s (30 recycles)
2024-07-29 01:04:56,796 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=44.1 pTM=0.385 ipTM=0.161
2024-07-29 01:05:27,079 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=44.3 pTM=0.387 ipTM=0.168 tol=12.5
2024-07-29 01:05:57,416 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=44.8 pTM=0.385 ipTM=0.156 tol=9.62
2024-07-29 01:06:27,735 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=45.1 pTM=0.387 ipTM=0.156 tol=7.46
2024-07-29 01:06:58,061 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=45.1 pTM=0.389 ipTM=0.158 tol=6.95
2024-07-29 01:07:28,397 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=45.4 pTM=0.391 ipTM=0.175 tol=5.45
2024-07-29 01:07:58,739 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=45.2 pTM=0.39 ipTM=0.168 tol=4.3
2024-07-29 01:08:29,091 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=45.5 pTM=0.39 ipTM=0.167 tol=6.09
2024-07-29 01:08:59,447 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=45.4 pTM=0.389 ipTM=0.161 tol=3.6
2024-07-29 01:09:29,822 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=45.5 pTM=0.39 ipTM=0.154 tol=3.93
2024-07-29 01:10:00,172 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=45.3 pTM=0.391 ipTM=0.159 tol=3.83
2024-07-29 01:10:30,537 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=45.3 pTM=0.391 ipTM=0.157 tol=3.97
2024-07-29 01:11:00,893 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=45.2 pTM=0.393 ipTM=0.169 tol=6.1
2024-07-29 01:11:31,258 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=45.2 pTM=0.396 ipTM=0.176 tol=7.7
2024-07-29 01:12:01,621 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=45.1 pTM=0.394 ipTM=0.179 tol=8.38
2024-07-29 01:12:31,977 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=44.9 pTM=0.395 ipTM=0.181 tol=6.18
2024-07-29 01:13:02,301 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=45.2 pTM=0.394 ipTM=0.184 tol=3.85
2024-07-29 01:13:32,631 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=45.3 pTM=0.395 ipTM=0.185 tol=6.9
2024-07-29 01:14:02,968 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=45.2 pTM=0.395 ipTM=0.183 tol=7.82
2024-07-29 01:14:33,297 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=45.2 pTM=0.396 ipTM=0.183 tol=6.57
2024-07-29 01:15:03,613 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=45.2 pTM=0.395 ipTM=0.184 tol=3.57
2024-07-29 01:15:33,939 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=45.3 pTM=0.394 ipTM=0.179 tol=6.88
2024-07-29 01:16:04,265 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=45.3 pTM=0.396 ipTM=0.184 tol=5.3
2024-07-29 01:16:34,609 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=45.4 pTM=0.395 ipTM=0.181 tol=7.5
2024-07-29 01:17:04,948 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=45.3 pTM=0.393 ipTM=0.176 tol=6.36
2024-07-29 01:17:35,269 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=45.2 pTM=0.395 ipTM=0.181 tol=5.41
2024-07-29 01:18:05,611 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=45.3 pTM=0.395 ipTM=0.181 tol=5.79
2024-07-29 01:18:35,939 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=45.3 pTM=0.395 ipTM=0.18 tol=4.82
2024-07-29 01:19:06,265 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=45.2 pTM=0.395 ipTM=0.178 tol=3.64
2024-07-29 01:19:36,579 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=45.2 pTM=0.395 ipTM=0.179 tol=3.53
2024-07-29 01:20:06,920 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=45.1 pTM=0.396 ipTM=0.183 tol=2.57
2024-07-29 01:20:06,921 alphafold2_multimer_v3_model_5_seed_000 took 940.4s (30 recycles)
2024-07-29 01:20:07,809 reranking models by 'multimer' metric
2024-07-29 01:20:11,127 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-29 01:22:38,058 Relaxation took 150.2s
2024-07-29 01:22:38,059 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=46.7 pTM=0.423 ipTM=0.357
2024-07-29 01:24:56,653 Relaxation took 138.6s
2024-07-29 01:24:56,653 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=45.3 pTM=0.402 ipTM=0.229
2024-07-29 01:27:59,526 Relaxation took 182.9s
2024-07-29 01:27:59,526 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46.3 pTM=0.396 ipTM=0.23
2024-07-29 01:29:56,330 Relaxation took 116.8s
2024-07-29 01:29:56,330 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=45.1 pTM=0.396 ipTM=0.183
2024-07-29 01:31:57,855 Relaxation took 121.5s
2024-07-29 01:31:57,856 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.9 pTM=0.391 ipTM=0.143
2024-07-29 01:32:00,180 Done