2024-07-29 02:00:37,192 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-29 02:00:37,501 Running on GPU 2024-07-29 02:00:38,254 Found 6 citations for tools or databases 2024-07-29 02:00:38,254 Query 1/1: ZXDC_WSB1 (length 1279) 2024-07-29 02:00:38,699 Sleeping for 10s. Reason: PENDING 2024-07-29 02:00:49,134 Sleeping for 7s. Reason: RUNNING 2024-07-29 02:00:56,562 Sleeping for 6s. Reason: RUNNING 2024-07-29 02:01:02,983 Sleeping for 5s. Reason: RUNNING 2024-07-29 02:01:08,414 Sleeping for 9s. Reason: RUNNING 2024-07-29 02:01:17,834 Sleeping for 6s. Reason: RUNNING 2024-07-29 02:01:24,268 Sleeping for 7s. Reason: RUNNING 2024-07-29 02:01:31,707 Sleeping for 7s. Reason: RUNNING 2024-07-29 02:01:39,133 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:01:47,568 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:01:55,986 Sleeping for 6s. Reason: RUNNING 2024-07-29 02:02:02,429 Sleeping for 10s. Reason: RUNNING 2024-07-29 02:02:12,849 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:02:21,283 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:02:29,703 Sleeping for 9s. Reason: RUNNING 2024-07-29 02:02:39,241 Sleeping for 9s. Reason: RUNNING 2024-07-29 02:02:48,669 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:02:57,091 Sleeping for 9s. Reason: RUNNING 2024-07-29 02:03:06,543 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:03:14,951 Sleeping for 10s. Reason: RUNNING 2024-07-29 02:03:25,384 Sleeping for 6s. Reason: RUNNING 2024-07-29 02:03:31,816 Sleeping for 7s. Reason: RUNNING 2024-07-29 02:03:39,262 Sleeping for 9s. Reason: RUNNING 2024-07-29 02:03:50,749 Sleeping for 8s. Reason: PENDING 2024-07-29 02:03:59,179 Sleeping for 7s. Reason: RUNNING 2024-07-29 02:04:06,600 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:04:15,016 Sleeping for 10s. Reason: RUNNING 2024-07-29 02:04:25,543 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:04:33,990 Sleeping for 9s. Reason: RUNNING 2024-07-29 02:04:43,407 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:04:51,934 Sleeping for 10s. Reason: RUNNING 2024-07-29 02:05:02,359 Sleeping for 7s. Reason: RUNNING 2024-07-29 02:05:09,849 Sleeping for 8s. Reason: RUNNING 2024-07-29 02:05:18,300 Sleeping for 6s. Reason: RUNNING 2024-07-29 02:05:24,743 Sleeping for 10s. Reason: RUNNING 2024-07-29 02:05:35,169 Sleeping for 7s. Reason: RUNNING 2024-07-29 02:05:42,579 Sleeping for 7s. Reason: RUNNING 2024-07-29 02:05:53,919 Setting max_seq=508, max_extra_seq=2048 2024-07-29 02:09:39,146 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=44.6 pTM=0.395 ipTM=0.304 2024-07-29 02:10:21,011 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=45.1 pTM=0.401 ipTM=0.568 tol=14.2 2024-07-29 02:11:03,003 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=45.2 pTM=0.402 ipTM=0.23 tol=10.1 2024-07-29 02:11:45,112 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=46.2 pTM=0.404 ipTM=0.227 tol=7.04 2024-07-29 02:12:27,457 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=46.2 pTM=0.404 ipTM=0.231 tol=10.9 2024-07-29 02:13:09,892 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=46.7 pTM=0.404 ipTM=0.256 tol=10.4 2024-07-29 02:13:52,344 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=46.9 pTM=0.402 ipTM=0.232 tol=8.26 2024-07-29 02:14:34,711 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=46.8 pTM=0.402 ipTM=0.26 tol=8.73 2024-07-29 02:15:17,098 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=46.3 pTM=0.399 ipTM=0.213 tol=6.91 2024-07-29 02:15:59,509 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=46.4 pTM=0.399 ipTM=0.223 tol=5.55 2024-07-29 02:16:41,762 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=46.4 pTM=0.398 ipTM=0.222 tol=7.5 2024-07-29 02:17:24,027 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=46.6 pTM=0.399 ipTM=0.232 tol=9.46 2024-07-29 02:18:06,296 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=46.6 pTM=0.397 ipTM=0.209 tol=6.39 2024-07-29 02:18:48,564 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=46.2 pTM=0.397 ipTM=0.224 tol=5.97 2024-07-29 02:19:30,860 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=46.6 pTM=0.398 ipTM=0.213 tol=4.19 2024-07-29 02:20:13,331 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=46.9 pTM=0.4 ipTM=0.223 tol=6.21 2024-07-29 02:20:55,803 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=46.9 pTM=0.397 ipTM=0.216 tol=3.66 2024-07-29 02:21:38,088 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47 pTM=0.399 ipTM=0.233 tol=8.02 2024-07-29 02:22:20,481 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=46.8 pTM=0.397 ipTM=0.217 tol=4.32 2024-07-29 02:23:02,714 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=46.7 pTM=0.397 ipTM=0.226 tol=3.2 2024-07-29 02:23:45,108 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=46.7 pTM=0.396 ipTM=0.216 tol=3.65 2024-07-29 02:24:27,491 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47 pTM=0.397 ipTM=0.228 tol=3.52 2024-07-29 02:25:09,833 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=46.3 pTM=0.395 ipTM=0.216 tol=3.66 2024-07-29 02:25:52,022 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=46.8 pTM=0.397 ipTM=0.223 tol=3.26 2024-07-29 02:26:34,238 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=46.4 pTM=0.396 ipTM=0.217 tol=3.22 2024-07-29 02:27:16,453 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=46.8 pTM=0.398 ipTM=0.233 tol=4.25 2024-07-29 02:27:58,789 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=46.6 pTM=0.397 ipTM=0.223 tol=3.35 2024-07-29 02:28:41,243 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=46.8 pTM=0.398 ipTM=0.255 tol=8.03 2024-07-29 02:29:23,561 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=46.5 pTM=0.398 ipTM=0.219 tol=6.77 2024-07-29 02:30:05,857 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=46.5 pTM=0.398 ipTM=0.224 tol=4.73 2024-07-29 02:30:48,157 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=46.9 pTM=0.398 ipTM=0.225 tol=3.82 2024-07-29 02:30:48,158 alphafold2_multimer_v3_model_1_seed_000 took 1489.5s (30 recycles) 2024-07-29 02:31:31,565 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.6 pTM=0.394 ipTM=0.206 2024-07-29 02:32:14,029 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.3 pTM=0.401 ipTM=0.441 tol=21.2 2024-07-29 02:32:56,450 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=46.1 pTM=0.395 ipTM=0.256 tol=18.1 2024-07-29 02:33:38,724 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.8 pTM=0.392 ipTM=0.236 tol=14.3 2024-07-29 02:34:21,056 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46.7 pTM=0.397 ipTM=0.324 tol=11.5 2024-07-29 02:35:03,272 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.4 pTM=0.403 ipTM=0.423 tol=9.75 2024-07-29 02:35:45,633 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=47.8 pTM=0.408 ipTM=0.442 tol=10.8 2024-07-29 02:36:27,938 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48 pTM=0.409 ipTM=0.417 tol=9.18 2024-07-29 02:37:10,214 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=47.2 pTM=0.401 ipTM=0.322 tol=6.25 2024-07-29 02:37:52,509 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=47.9 pTM=0.41 ipTM=0.435 tol=5.11 2024-07-29 02:38:34,930 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47.6 pTM=0.404 ipTM=0.375 tol=4.66 2024-07-29 02:39:17,328 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=48.2 pTM=0.413 ipTM=0.494 tol=5.75 2024-07-29 02:39:59,554 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=48.2 pTM=0.409 ipTM=0.384 tol=4.02 2024-07-29 02:40:41,882 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.8 pTM=0.408 ipTM=0.448 tol=3.75 2024-07-29 02:41:24,108 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=47.6 pTM=0.402 ipTM=0.363 tol=2.7 2024-07-29 02:42:06,348 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48 pTM=0.408 ipTM=0.442 tol=3.69 2024-07-29 02:42:48,702 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=48.4 pTM=0.411 ipTM=0.403 tol=3.69 2024-07-29 02:43:31,071 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=48.4 pTM=0.411 ipTM=0.437 tol=3.41 2024-07-29 02:44:13,401 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.1 pTM=0.404 ipTM=0.379 tol=3.49 2024-07-29 02:44:55,692 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.9 pTM=0.406 ipTM=0.43 tol=3.46 2024-07-29 02:45:37,976 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=48.2 pTM=0.406 ipTM=0.397 tol=2.96 2024-07-29 02:46:20,226 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.9 pTM=0.406 ipTM=0.413 tol=2.59 2024-07-29 02:47:02,444 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48 pTM=0.407 ipTM=0.43 tol=3.1 2024-07-29 02:47:44,642 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=48.1 pTM=0.406 ipTM=0.414 tol=2.77 2024-07-29 02:48:26,829 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.8 pTM=0.404 ipTM=0.417 tol=3.33 2024-07-29 02:49:08,989 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.9 pTM=0.405 ipTM=0.4 tol=2.85 2024-07-29 02:49:51,141 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=47.8 pTM=0.406 ipTM=0.452 tol=3.09 2024-07-29 02:50:33,417 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.2 pTM=0.411 ipTM=0.44 tol=2.92 2024-07-29 02:51:15,622 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48 pTM=0.409 ipTM=0.445 tol=2.97 2024-07-29 02:51:57,858 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.2 pTM=0.411 ipTM=0.442 tol=2.51 2024-07-29 02:52:40,205 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=48.3 pTM=0.411 ipTM=0.431 tol=2.3 2024-07-29 02:52:40,207 alphafold2_multimer_v3_model_2_seed_000 took 1311.1s (30 recycles) 2024-07-29 02:53:23,684 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=44.7 pTM=0.396 ipTM=0.241 2024-07-29 02:54:06,150 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=43.9 pTM=0.403 ipTM=0.236 tol=23 2024-07-29 02:54:48,589 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=45 pTM=0.396 ipTM=0.195 tol=26.9 2024-07-29 02:55:31,112 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=45.3 pTM=0.398 ipTM=0.191 tol=17.4 2024-07-29 02:56:13,740 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=45.3 pTM=0.397 ipTM=0.19 tol=8.38 2024-07-29 02:56:56,216 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=45.4 pTM=0.397 ipTM=0.197 tol=8.24 2024-07-29 02:57:38,675 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=45.8 pTM=0.397 ipTM=0.187 tol=11.1 2024-07-29 02:58:21,218 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=45 pTM=0.395 ipTM=0.196 tol=11.9 2024-07-29 02:59:03,694 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=45.2 pTM=0.398 ipTM=0.215 tol=10.5 2024-07-29 02:59:46,299 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=45.6 pTM=0.395 ipTM=0.188 tol=9.45 2024-07-29 03:00:28,887 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=45.5 pTM=0.399 ipTM=0.21 tol=11.7 2024-07-29 03:01:11,317 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=45.7 pTM=0.395 ipTM=0.184 tol=8.41 2024-07-29 03:01:53,853 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=45.5 pTM=0.399 ipTM=0.233 tol=6.61 2024-07-29 03:02:36,367 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=45.3 pTM=0.394 ipTM=0.187 tol=6.29 2024-07-29 03:03:18,819 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=45.5 pTM=0.398 ipTM=0.222 tol=5.73 2024-07-29 03:04:01,251 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=45.5 pTM=0.395 ipTM=0.193 tol=6.38 2024-07-29 03:04:43,689 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=45.6 pTM=0.399 ipTM=0.223 tol=6.67 2024-07-29 03:05:26,126 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=45.4 pTM=0.396 ipTM=0.201 tol=7.03 2024-07-29 03:06:08,614 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=45.8 pTM=0.4 ipTM=0.228 tol=7.41 2024-07-29 03:06:51,114 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=45.3 pTM=0.397 ipTM=0.202 tol=8.49 2024-07-29 03:07:33,477 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=45.4 pTM=0.398 ipTM=0.239 tol=7.47 2024-07-29 03:08:15,993 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=45.2 pTM=0.401 ipTM=0.206 tol=7.53 2024-07-29 03:08:58,408 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=45.4 pTM=0.399 ipTM=0.232 tol=8.38 2024-07-29 03:09:40,821 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=45.3 pTM=0.398 ipTM=0.2 tol=7.46 2024-07-29 03:10:23,240 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=45.8 pTM=0.4 ipTM=0.227 tol=4.94 2024-07-29 03:11:05,692 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=45.3 pTM=0.398 ipTM=0.198 tol=5.04 2024-07-29 03:11:48,101 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=45.6 pTM=0.402 ipTM=0.255 tol=7.98 2024-07-29 03:12:30,476 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=45.7 pTM=0.398 ipTM=0.191 tol=9.06 2024-07-29 03:13:12,836 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=45.6 pTM=0.401 ipTM=0.235 tol=12.4 2024-07-29 03:13:55,331 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=45.6 pTM=0.402 ipTM=0.209 tol=7.22 2024-07-29 03:14:37,793 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=46.1 pTM=0.403 ipTM=0.235 tol=17.3 2024-07-29 03:14:37,794 alphafold2_multimer_v3_model_3_seed_000 took 1316.6s (30 recycles) 2024-07-29 03:15:21,094 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.2 pTM=0.422 ipTM=0.515 2024-07-29 03:16:03,674 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.3 pTM=0.384 ipTM=0.201 tol=21.3 2024-07-29 03:16:46,300 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=44.9 pTM=0.386 ipTM=0.202 tol=13.3 2024-07-29 03:17:28,852 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=45.6 pTM=0.385 ipTM=0.185 tol=11.5 2024-07-29 03:18:11,482 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45.4 pTM=0.384 ipTM=0.193 tol=12.9 2024-07-29 03:18:54,140 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=45.1 pTM=0.383 ipTM=0.216 tol=8.99 2024-07-29 03:19:36,697 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=45.4 pTM=0.397 ipTM=0.322 tol=15.1 2024-07-29 03:20:19,188 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.8 pTM=0.387 ipTM=0.241 tol=12.4 2024-07-29 03:21:01,823 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.9 pTM=0.396 ipTM=0.323 tol=8.92 2024-07-29 03:21:44,208 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.8 pTM=0.4 ipTM=0.412 tol=7.88 2024-07-29 03:22:26,677 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.3 pTM=0.394 ipTM=0.364 tol=8.46 2024-07-29 03:23:09,272 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=45.9 pTM=0.389 ipTM=0.293 tol=11 2024-07-29 03:23:51,864 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.2 pTM=0.389 ipTM=0.293 tol=6.6 2024-07-29 03:24:34,480 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.2 pTM=0.395 ipTM=0.336 tol=10.5 2024-07-29 03:25:17,048 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.4 pTM=0.392 ipTM=0.325 tol=9.85 2024-07-29 03:25:59,631 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=45.8 pTM=0.385 ipTM=0.264 tol=4.69 2024-07-29 03:26:42,053 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46 pTM=0.39 ipTM=0.31 tol=5.77 2024-07-29 03:27:24,474 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46 pTM=0.386 ipTM=0.29 tol=5.59 2024-07-29 03:28:07,064 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.1 pTM=0.391 ipTM=0.3 tol=4.76 2024-07-29 03:28:49,559 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.2 pTM=0.389 ipTM=0.325 tol=8.38 2024-07-29 03:29:32,128 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45.9 pTM=0.39 ipTM=0.292 tol=5.28 2024-07-29 03:30:14,543 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.2 pTM=0.391 ipTM=0.31 tol=5.87 2024-07-29 03:30:56,946 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.1 pTM=0.396 ipTM=0.387 tol=5.39 2024-07-29 03:31:39,403 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.7 pTM=0.388 ipTM=0.288 tol=5.67 2024-07-29 03:32:21,918 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46 pTM=0.389 ipTM=0.306 tol=5.3 2024-07-29 03:33:04,522 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.8 pTM=0.387 ipTM=0.27 tol=4.78 2024-07-29 03:33:47,009 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.2 pTM=0.387 ipTM=0.273 tol=6.99 2024-07-29 03:34:29,563 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46 pTM=0.389 ipTM=0.261 tol=5.05 2024-07-29 03:35:12,033 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.2 pTM=0.394 ipTM=0.345 tol=6.77 2024-07-29 03:35:54,562 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.3 pTM=0.394 ipTM=0.333 tol=5.51 2024-07-29 03:36:36,952 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.4 pTM=0.396 ipTM=0.323 tol=11.8 2024-07-29 03:36:36,954 alphafold2_multimer_v3_model_4_seed_000 took 1318.2s (30 recycles) 2024-07-29 03:37:20,322 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=46.1 pTM=0.391 ipTM=0.228 2024-07-29 03:38:02,784 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.3 pTM=0.397 ipTM=0.218 tol=11.5 2024-07-29 03:38:45,219 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.7 pTM=0.398 ipTM=0.22 tol=8.66 2024-07-29 03:39:27,727 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.9 pTM=0.4 ipTM=0.194 tol=10.7 2024-07-29 03:40:10,356 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.2 pTM=0.397 ipTM=0.181 tol=6.94 2024-07-29 03:40:52,950 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.5 pTM=0.398 ipTM=0.197 tol=5.81 2024-07-29 03:41:35,418 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.5 pTM=0.397 ipTM=0.174 tol=7.42 2024-07-29 03:42:17,880 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.4 pTM=0.398 ipTM=0.203 tol=7.48 2024-07-29 03:43:00,554 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.2 pTM=0.396 ipTM=0.173 tol=5.96 2024-07-29 03:43:43,061 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.5 pTM=0.398 ipTM=0.219 tol=8.64 2024-07-29 03:44:25,721 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.3 pTM=0.396 ipTM=0.17 tol=7.14 2024-07-29 03:45:08,150 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.5 pTM=0.398 ipTM=0.21 tol=7.75 2024-07-29 03:45:50,744 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.2 pTM=0.395 ipTM=0.17 tol=7.51 2024-07-29 03:46:33,329 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.3 pTM=0.398 ipTM=0.202 tol=6.97 2024-07-29 03:47:15,899 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.1 pTM=0.396 ipTM=0.174 tol=7.97 2024-07-29 03:47:58,433 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.3 pTM=0.398 ipTM=0.213 tol=4.04 2024-07-29 03:48:40,973 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.3 pTM=0.396 ipTM=0.175 tol=3.17 2024-07-29 03:49:23,523 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.3 pTM=0.396 ipTM=0.201 tol=3.93 2024-07-29 03:50:05,959 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.5 pTM=0.396 ipTM=0.184 tol=3.52 2024-07-29 03:50:48,480 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.2 pTM=0.396 ipTM=0.2 tol=7.92 2024-07-29 03:51:30,942 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.2 pTM=0.395 ipTM=0.182 tol=8.31 2024-07-29 03:52:13,310 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.2 pTM=0.397 ipTM=0.212 tol=4.79 2024-07-29 03:52:55,805 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.1 pTM=0.393 ipTM=0.173 tol=2.98 2024-07-29 03:53:38,283 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.3 pTM=0.396 ipTM=0.196 tol=9.23 2024-07-29 03:54:20,793 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.3 pTM=0.393 ipTM=0.171 tol=4.31 2024-07-29 03:55:03,261 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.2 pTM=0.396 ipTM=0.197 tol=8.08 2024-07-29 03:55:45,839 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47 pTM=0.395 ipTM=0.174 tol=9.87 2024-07-29 03:56:28,251 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.1 pTM=0.396 ipTM=0.188 tol=8.4 2024-07-29 03:57:10,639 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=46.9 pTM=0.394 ipTM=0.172 tol=7.79 2024-07-29 03:57:53,140 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47 pTM=0.396 ipTM=0.197 tol=4.43 2024-07-29 03:58:35,514 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.1 pTM=0.395 ipTM=0.174 tol=4.37 2024-07-29 03:58:35,516 alphafold2_multimer_v3_model_5_seed_000 took 1317.6s (30 recycles) 2024-07-29 03:58:36,501 reranking models by 'multimer' metric 2024-07-29 03:58:37,863 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-29 04:02:16,355 Relaxation took 219.9s 2024-07-29 04:02:16,356 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=48.3 pTM=0.411 ipTM=0.431 2024-07-29 04:05:01,702 Relaxation took 165.3s 2024-07-29 04:05:01,703 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.4 pTM=0.396 ipTM=0.323 2024-07-29 04:08:04,912 Relaxation took 183.2s 2024-07-29 04:08:04,913 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=46.1 pTM=0.403 ipTM=0.235 2024-07-29 04:11:05,554 Relaxation took 180.6s 2024-07-29 04:11:05,554 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=46.9 pTM=0.398 ipTM=0.225 2024-07-29 04:13:18,545 Relaxation took 133.0s 2024-07-29 04:13:18,546 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.1 pTM=0.395 ipTM=0.174 2024-07-29 04:13:20,920 Done