2024-07-08 11:49:54,305 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-08 11:49:55,967 Running on GPU 2024-07-08 11:49:59,770 Found 6 citations for tools or databases 2024-07-08 11:49:59,770 Query 1/1: 2AAA_CAC1C (length 2810) 2024-07-08 11:50:00,364 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:50:09,795 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:50:15,254 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:50:24,668 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:50:32,098 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:50:42,900 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:50:48,320 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:50:57,741 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:51:03,166 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:51:13,578 Sleeping for 8s. Reason: RUNNING 2024-07-08 11:51:22,021 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:51:32,463 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:51:39,873 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:51:49,304 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:51:56,735 Sleeping for 6s. Reason: RUNNING 2024-07-08 11:53:00,691 Sleeping for 7s. Reason: PENDING 2024-07-08 11:53:08,110 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:53:17,545 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:53:22,962 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:53:28,389 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:53:38,814 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:53:46,244 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:53:56,663 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:54:06,094 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:54:16,532 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:54:23,962 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:54:31,388 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:54:38,811 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:54:48,237 Sleeping for 8s. Reason: RUNNING 2024-07-08 11:54:56,689 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:55:07,104 Sleeping for 8s. Reason: RUNNING 2024-07-08 11:55:15,524 Sleeping for 8s. Reason: RUNNING 2024-07-08 11:55:23,953 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:55:31,370 Sleeping for 8s. Reason: RUNNING 2024-07-08 11:55:39,777 Sleeping for 6s. Reason: RUNNING 2024-07-08 11:55:46,202 Sleeping for 6s. Reason: RUNNING 2024-07-08 11:55:53,856 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:56:03,282 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:56:13,702 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:56:21,124 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:56:31,558 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:56:40,983 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:56:48,430 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:56:58,852 Sleeping for 6s. Reason: RUNNING 2024-07-08 11:57:05,292 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:57:15,714 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:57:23,152 Sleeping for 8s. Reason: RUNNING 2024-07-08 11:57:31,592 Sleeping for 6s. Reason: RUNNING 2024-07-08 11:57:38,055 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:57:43,474 Sleeping for 8s. Reason: RUNNING 2024-07-08 11:57:51,911 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:57:57,340 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:58:04,767 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:58:10,208 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:58:17,646 Sleeping for 5s. Reason: RUNNING 2024-07-08 11:58:23,081 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:58:32,497 Sleeping for 6s. Reason: RUNNING 2024-07-08 11:58:39,268 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:58:49,690 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:58:57,109 Sleeping for 9s. Reason: RUNNING 2024-07-08 11:59:06,562 Sleeping for 8s. Reason: RUNNING 2024-07-08 11:59:14,986 Sleeping for 7s. Reason: RUNNING 2024-07-08 11:59:22,418 Sleeping for 10s. Reason: RUNNING 2024-07-08 11:59:57,204 Setting max_seq=508, max_extra_seq=2048 2024-07-08 12:09:58,950 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.5 pTM=0.564 ipTM=0.268 2024-07-08 12:17:03,534 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.8 pTM=0.567 ipTM=0.285 tol=12.2 2024-07-08 12:24:08,076 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.2 pTM=0.573 ipTM=0.292 tol=9.69 2024-07-08 12:31:12,654 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.2 pTM=0.573 ipTM=0.292 tol=7.83 2024-07-08 12:38:17,322 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.5 pTM=0.566 ipTM=0.257 tol=13.6 2024-07-08 12:45:21,995 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.7 pTM=0.566 ipTM=0.254 tol=18.2 2024-07-08 12:52:26,692 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.6 pTM=0.566 ipTM=0.245 tol=10.6 2024-07-08 12:59:31,576 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.9 pTM=0.564 ipTM=0.242 tol=10.9 2024-07-08 13:06:36,250 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.2 pTM=0.567 ipTM=0.265 tol=9.09 2024-07-08 13:13:40,858 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.1 pTM=0.566 ipTM=0.261 tol=6.62 2024-07-08 13:20:45,390 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.3 pTM=0.569 ipTM=0.265 tol=3.92 2024-07-08 13:27:50,077 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.8 pTM=0.57 ipTM=0.266 tol=18.2 2024-07-08 13:34:54,755 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.9 pTM=0.575 ipTM=0.274 tol=15.6 2024-07-08 13:41:59,598 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.8 pTM=0.567 ipTM=0.243 tol=9.92 2024-07-08 13:49:04,367 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.7 pTM=0.568 ipTM=0.245 tol=7.88 2024-07-08 13:56:09,156 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.8 pTM=0.568 ipTM=0.243 tol=10.1 2024-07-08 14:03:13,939 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.1 pTM=0.568 ipTM=0.25 tol=8.81 2024-07-08 14:10:18,637 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62 pTM=0.567 ipTM=0.262 tol=11.3 2024-07-08 14:17:23,205 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.2 pTM=0.569 ipTM=0.265 tol=8.52 2024-07-08 14:24:27,753 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.2 pTM=0.572 ipTM=0.276 tol=7.71 2024-07-08 14:31:32,002 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.3 pTM=0.574 ipTM=0.285 tol=6.97 2024-07-08 14:38:36,352 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.3 pTM=0.573 ipTM=0.282 tol=7.74 2024-07-08 14:45:40,807 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.4 pTM=0.572 ipTM=0.278 tol=7.35 2024-07-08 14:52:45,594 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.1 pTM=0.567 ipTM=0.254 tol=9.28 2024-07-08 14:59:50,072 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.8 pTM=0.57 ipTM=0.263 tol=16.2 2024-07-08 15:06:54,677 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.6 pTM=0.57 ipTM=0.26 tol=12 2024-07-08 15:13:59,434 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.8 pTM=0.567 ipTM=0.243 tol=8.38 2024-07-08 15:21:04,194 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.9 pTM=0.566 ipTM=0.24 tol=11.1 2024-07-08 15:28:08,863 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.1 pTM=0.567 ipTM=0.258 tol=12 2024-07-08 15:35:13,330 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.3 pTM=0.577 ipTM=0.274 tol=10.6 2024-07-08 15:42:17,864 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.4 pTM=0.575 ipTM=0.271 tol=8.82 2024-07-08 15:42:17,867 alphafold2_multimer_v3_model_1_seed_000 took 13337.3s (30 recycles) 2024-07-08 15:49:26,944 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.2 pTM=0.566 ipTM=0.303 2024-07-08 15:56:31,900 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.3 pTM=0.563 ipTM=0.292 tol=9.55 2024-07-08 16:03:37,206 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.2 pTM=0.555 ipTM=0.255 tol=13.4 2024-07-08 16:10:42,549 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.1 pTM=0.551 ipTM=0.241 tol=12.4 2024-07-08 16:17:48,023 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.5 pTM=0.552 ipTM=0.24 tol=7.77 2024-07-08 16:24:53,573 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.7 pTM=0.554 ipTM=0.238 tol=10.8 2024-07-08 16:31:59,130 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.4 pTM=0.55 ipTM=0.235 tol=8.02 2024-07-08 16:39:04,743 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.8 pTM=0.551 ipTM=0.231 tol=6.45 2024-07-08 16:46:10,301 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.9 pTM=0.551 ipTM=0.232 tol=3.83 2024-07-08 16:53:15,836 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.9 pTM=0.55 ipTM=0.23 tol=5.6 2024-07-08 17:00:21,367 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.8 pTM=0.55 ipTM=0.229 tol=4.38 2024-07-08 17:07:26,926 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.9 pTM=0.549 ipTM=0.229 tol=6.32 2024-07-08 17:14:32,462 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.7 pTM=0.549 ipTM=0.23 tol=6.01 2024-07-08 17:21:37,968 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.7 pTM=0.549 ipTM=0.231 tol=7.53 2024-07-08 17:28:43,596 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.6 pTM=0.547 ipTM=0.232 tol=7.86 2024-07-08 17:35:49,193 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=61.6 pTM=0.547 ipTM=0.236 tol=8.05 2024-07-08 17:42:54,779 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.7 pTM=0.547 ipTM=0.237 tol=4.93 2024-07-08 17:50:00,268 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.2 pTM=0.554 ipTM=0.243 tol=15.3 2024-07-08 17:57:05,729 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.9 pTM=0.554 ipTM=0.238 tol=9.5 2024-07-08 18:04:11,417 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.8 pTM=0.553 ipTM=0.235 tol=6.95 2024-07-08 18:11:17,162 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62 pTM=0.553 ipTM=0.234 tol=6.04 2024-07-08 18:18:22,919 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62 pTM=0.55 ipTM=0.228 tol=6.96 2024-07-08 18:25:28,654 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.9 pTM=0.549 ipTM=0.229 tol=6.13 2024-07-08 18:32:34,301 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.1 pTM=0.552 ipTM=0.229 tol=7.3 2024-07-08 18:39:39,938 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.1 pTM=0.552 ipTM=0.23 tol=4.38 2024-07-08 18:46:45,452 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62 pTM=0.55 ipTM=0.23 tol=4.61 2024-07-08 18:53:51,145 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.1 pTM=0.55 ipTM=0.23 tol=4.2 2024-07-08 19:00:56,767 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.9 pTM=0.55 ipTM=0.229 tol=6.65 2024-07-08 19:08:02,394 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.2 pTM=0.552 ipTM=0.231 tol=6.39 2024-07-08 19:15:08,037 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62 pTM=0.551 ipTM=0.229 tol=4.98 2024-07-08 19:22:13,664 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62 pTM=0.552 ipTM=0.229 tol=7.21 2024-07-08 19:22:13,668 alphafold2_multimer_v3_model_2_seed_000 took 13191.4s (30 recycles) 2024-07-08 19:29:23,357 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.4 pTM=0.55 ipTM=0.243 2024-07-08 19:36:28,558 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.1 pTM=0.552 ipTM=0.25 tol=13.3 2024-07-08 19:43:33,694 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.8 pTM=0.554 ipTM=0.241 tol=12.3 2024-07-08 19:50:38,865 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.9 pTM=0.552 ipTM=0.239 tol=9.01 2024-07-08 19:57:43,979 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.9 pTM=0.552 ipTM=0.241 tol=5.86 2024-07-08 20:04:49,069 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.2 pTM=0.553 ipTM=0.241 tol=3.96 2024-07-08 20:11:54,289 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.4 pTM=0.55 ipTM=0.237 tol=6.92 2024-07-08 20:18:59,394 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.1 pTM=0.55 ipTM=0.242 tol=7.76 2024-07-08 20:26:04,455 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.3 pTM=0.552 ipTM=0.241 tol=4.22 2024-07-08 20:33:09,574 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.4 pTM=0.553 ipTM=0.246 tol=7.43 2024-07-08 20:40:14,848 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.4 pTM=0.549 ipTM=0.235 tol=4.04 2024-07-08 20:47:19,997 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.4 pTM=0.55 ipTM=0.24 tol=4.73 2024-07-08 20:54:25,117 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.6 pTM=0.552 ipTM=0.24 tol=8.4 2024-07-08 21:01:30,259 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.5 pTM=0.554 ipTM=0.25 tol=10.1 2024-07-08 21:08:35,389 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.3 pTM=0.552 ipTM=0.242 tol=4.72 2024-07-08 21:15:40,549 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.4 pTM=0.552 ipTM=0.242 tol=3.75 2024-07-08 21:22:45,765 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.6 pTM=0.552 ipTM=0.241 tol=7.83 2024-07-08 21:29:50,886 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.3 pTM=0.552 ipTM=0.243 tol=7.29 2024-07-08 21:36:55,945 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.6 pTM=0.555 ipTM=0.248 tol=7.16 2024-07-08 21:44:00,946 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.5 pTM=0.554 ipTM=0.253 tol=6.19 2024-07-08 21:51:06,058 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.3 pTM=0.552 ipTM=0.242 tol=9.68 2024-07-08 21:58:11,240 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=62.5 pTM=0.553 ipTM=0.248 tol=7.9 2024-07-08 22:05:16,318 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=62.5 pTM=0.553 ipTM=0.247 tol=7.38 2024-07-08 22:12:21,410 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=62.3 pTM=0.553 ipTM=0.249 tol=3.67 2024-07-08 22:19:26,403 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=62.5 pTM=0.555 ipTM=0.249 tol=3.26 2024-07-08 22:26:31,371 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=62.5 pTM=0.554 ipTM=0.251 tol=4.62 2024-07-08 22:33:36,415 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.3 pTM=0.554 ipTM=0.246 tol=4.16 2024-07-08 22:40:41,492 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.4 pTM=0.554 ipTM=0.252 tol=8.36 2024-07-08 22:47:46,576 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.4 pTM=0.552 ipTM=0.243 tol=7.88 2024-07-08 22:54:51,727 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.3 pTM=0.552 ipTM=0.252 tol=3.08 2024-07-08 23:01:56,775 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=62.2 pTM=0.553 ipTM=0.249 tol=8.88 2024-07-08 23:01:56,778 alphafold2_multimer_v3_model_3_seed_000 took 13178.7s (30 recycles) 2024-07-08 23:09:05,929 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60 pTM=0.554 ipTM=0.277 2024-07-08 23:16:10,852 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.5 pTM=0.55 ipTM=0.266 tol=11.3 2024-07-08 23:23:15,963 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.3 pTM=0.546 ipTM=0.248 tol=9.24 2024-07-08 23:30:21,107 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.7 pTM=0.544 ipTM=0.247 tol=10.5 2024-07-08 23:37:26,352 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.6 pTM=0.543 ipTM=0.24 tol=7.46 2024-07-08 23:44:31,572 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.8 pTM=0.543 ipTM=0.24 tol=6.23 2024-07-08 23:51:36,772 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=59.4 pTM=0.548 ipTM=0.239 tol=27.6 2024-07-08 23:58:42,023 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60 pTM=0.553 ipTM=0.25 tol=13 2024-07-09 00:05:47,244 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.1 pTM=0.555 ipTM=0.26 tol=10.1 2024-07-09 00:12:52,365 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.1 pTM=0.557 ipTM=0.261 tol=10.1 2024-07-09 00:19:57,449 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.3 pTM=0.557 ipTM=0.263 tol=11.1 2024-07-09 00:27:02,509 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.2 pTM=0.558 ipTM=0.266 tol=5.18 2024-07-09 00:34:07,610 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.5 pTM=0.557 ipTM=0.266 tol=5.2 2024-07-09 00:41:12,693 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.5 pTM=0.557 ipTM=0.263 tol=3.29 2024-07-09 00:48:17,860 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.4 pTM=0.557 ipTM=0.265 tol=3.57 2024-07-09 00:55:22,897 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.4 pTM=0.555 ipTM=0.262 tol=4.49 2024-07-09 01:02:27,856 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.6 pTM=0.556 ipTM=0.264 tol=5.64 2024-07-09 01:09:32,977 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.8 pTM=0.56 ipTM=0.27 tol=8.37 2024-07-09 01:16:38,144 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.5 pTM=0.558 ipTM=0.268 tol=6.3 2024-07-09 01:23:43,243 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.5 pTM=0.558 ipTM=0.271 tol=6.66 2024-07-09 01:30:48,293 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.5 pTM=0.557 ipTM=0.271 tol=5 2024-07-09 01:37:53,418 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.5 pTM=0.556 ipTM=0.265 tol=5.43 2024-07-09 01:44:58,563 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.7 pTM=0.558 ipTM=0.268 tol=4.55 2024-07-09 01:52:03,593 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.5 pTM=0.558 ipTM=0.268 tol=4.86 2024-07-09 01:59:08,706 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.6 pTM=0.559 ipTM=0.271 tol=7.12 2024-07-09 02:06:13,793 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.6 pTM=0.558 ipTM=0.27 tol=5.4 2024-07-09 02:13:18,826 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.6 pTM=0.559 ipTM=0.271 tol=6.51 2024-07-09 02:20:23,943 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.4 pTM=0.559 ipTM=0.27 tol=5.66 2024-07-09 02:27:29,056 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.5 pTM=0.558 ipTM=0.269 tol=8.07 2024-07-09 02:34:34,111 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.6 pTM=0.559 ipTM=0.269 tol=8.11 2024-07-09 02:41:39,266 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.7 pTM=0.558 ipTM=0.266 tol=6.62 2024-07-09 02:41:39,270 alphafold2_multimer_v3_model_4_seed_000 took 13178.0s (30 recycles) 2024-07-09 02:48:48,704 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.4 pTM=0.542 ipTM=0.246 2024-07-09 02:55:53,759 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.2 pTM=0.547 ipTM=0.241 tol=15 2024-07-09 03:02:58,931 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.4 pTM=0.553 ipTM=0.236 tol=26.2 2024-07-09 03:10:04,034 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.2 pTM=0.558 ipTM=0.241 tol=14 2024-07-09 03:17:09,042 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.3 pTM=0.558 ipTM=0.245 tol=12.4 2024-07-09 03:24:14,095 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.4 pTM=0.557 ipTM=0.241 tol=9.8 2024-07-09 03:31:19,059 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.4 pTM=0.555 ipTM=0.24 tol=12.3 2024-07-09 03:38:24,121 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.7 pTM=0.558 ipTM=0.244 tol=8.5 2024-07-09 03:45:29,202 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.5 pTM=0.558 ipTM=0.239 tol=9.11 2024-07-09 03:52:34,142 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.3 pTM=0.557 ipTM=0.24 tol=9.39 2024-07-09 03:59:39,224 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.5 pTM=0.558 ipTM=0.238 tol=6.27 2024-07-09 04:06:44,311 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.5 pTM=0.557 ipTM=0.239 tol=6.02 2024-07-09 04:13:49,314 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.6 pTM=0.557 ipTM=0.24 tol=8.77 2024-07-09 04:20:54,369 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.6 pTM=0.558 ipTM=0.24 tol=9.16 2024-07-09 04:27:59,433 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.5 pTM=0.557 ipTM=0.239 tol=10 2024-07-09 04:35:04,427 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.6 pTM=0.558 ipTM=0.239 tol=7.89 2024-07-09 04:42:09,494 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.7 pTM=0.556 ipTM=0.236 tol=8.33 2024-07-09 04:49:14,487 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.5 pTM=0.556 ipTM=0.236 tol=8.81 2024-07-09 04:56:19,485 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.6 pTM=0.555 ipTM=0.231 tol=5.78 2024-07-09 05:03:24,476 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.5 pTM=0.555 ipTM=0.234 tol=8.06 2024-07-09 05:10:29,585 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.5 pTM=0.556 ipTM=0.236 tol=9.84 2024-07-09 05:17:34,681 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.5 pTM=0.554 ipTM=0.23 tol=6.99 2024-07-09 05:24:39,734 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.6 pTM=0.555 ipTM=0.234 tol=9.34 2024-07-09 05:31:44,679 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.6 pTM=0.557 ipTM=0.237 tol=5.43 2024-07-09 05:38:49,597 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.6 pTM=0.557 ipTM=0.238 tol=9.64 2024-07-09 05:45:54,527 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.6 pTM=0.557 ipTM=0.235 tol=4.89 2024-07-09 05:52:59,503 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.6 pTM=0.557 ipTM=0.24 tol=9.74 2024-07-09 06:00:04,496 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.3 pTM=0.557 ipTM=0.236 tol=9.34 2024-07-09 06:07:09,571 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.5 pTM=0.557 ipTM=0.242 tol=10.6 2024-07-09 06:14:14,508 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.5 pTM=0.558 ipTM=0.243 tol=8.3 2024-07-09 06:21:19,514 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.6 pTM=0.557 ipTM=0.238 tol=10.1 2024-07-09 06:21:19,518 alphafold2_multimer_v3_model_5_seed_000 took 13175.8s (30 recycles) 2024-07-09 06:21:23,950 reranking models by 'multimer' metric 2024-07-09 06:21:28,762 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-09 06:31:20,081 Relaxation took 596.1s 2024-07-09 06:31:20,081 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.4 pTM=0.575 ipTM=0.271 2024-07-09 06:39:43,993 Relaxation took 503.9s 2024-07-09 06:39:43,993 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.7 pTM=0.558 ipTM=0.266 2024-07-09 06:50:23,293 Relaxation took 639.3s 2024-07-09 06:50:23,293 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=62.2 pTM=0.553 ipTM=0.249 2024-07-09 07:06:11,231 Relaxation took 947.9s 2024-07-09 07:06:11,231 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.6 pTM=0.557 ipTM=0.238 2024-07-09 07:17:06,366 Relaxation took 655.1s 2024-07-09 07:17:06,366 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62 pTM=0.552 ipTM=0.229 2024-07-09 07:17:15,639 Done