2024-07-08 11:49:54,314 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 11:49:55,367 Running on GPU
2024-07-08 11:49:59,772 Found 6 citations for tools or databases
2024-07-08 11:49:59,772 Query 1/1: ABCBA_NDUA7 (length 851)
2024-07-08 11:50:00,298 Sleeping for 8s. Reason: PENDING
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2024-07-08 11:56:33,141 Sleeping for 8s. Reason: PENDING
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2024-07-08 12:03:04,997 Sleeping for 6s. Reason: RUNNING
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2024-07-08 12:03:47,347 Setting max_seq=508, max_extra_seq=2048
2024-07-08 12:06:36,276 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.7 pTM=0.556 ipTM=0.127
2024-07-08 12:06:51,025 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.3 pTM=0.616 ipTM=0.167 tol=19.7
2024-07-08 12:07:05,846 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.9 pTM=0.638 ipTM=0.17 tol=7.34
2024-07-08 12:07:20,709 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.4 pTM=0.64 ipTM=0.194 tol=4.07
2024-07-08 12:07:35,621 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68 pTM=0.634 ipTM=0.175 tol=5.18
2024-07-08 12:07:50,557 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.3 pTM=0.637 ipTM=0.181 tol=2.92
2024-07-08 12:08:05,512 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68 pTM=0.633 ipTM=0.172 tol=3.39
2024-07-08 12:08:20,492 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.9 pTM=0.631 ipTM=0.163 tol=2.51
2024-07-08 12:08:35,487 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=67.7 pTM=0.634 ipTM=0.167 tol=2.88
2024-07-08 12:08:50,486 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.1 pTM=0.635 ipTM=0.175 tol=2.69
2024-07-08 12:09:05,481 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68 pTM=0.635 ipTM=0.172 tol=4.61
2024-07-08 12:09:20,489 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.6 pTM=0.632 ipTM=0.167 tol=3.99
2024-07-08 12:09:35,493 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.6 pTM=0.632 ipTM=0.162 tol=3.87
2024-07-08 12:09:50,510 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.8 pTM=0.634 ipTM=0.166 tol=4.4
2024-07-08 12:10:05,528 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.6 pTM=0.631 ipTM=0.162 tol=3.89
2024-07-08 12:10:20,557 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.8 pTM=0.632 ipTM=0.162 tol=4.33
2024-07-08 12:10:35,586 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.8 pTM=0.631 ipTM=0.16 tol=3.87
2024-07-08 12:10:50,621 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.8 pTM=0.631 ipTM=0.162 tol=2.42
2024-07-08 12:11:05,661 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=68 pTM=0.633 ipTM=0.162 tol=4.08
2024-07-08 12:11:20,691 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.9 pTM=0.632 ipTM=0.172 tol=4.47
2024-07-08 12:11:35,727 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.7 pTM=0.631 ipTM=0.167 tol=2.14
2024-07-08 12:11:50,751 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.8 pTM=0.63 ipTM=0.168 tol=3.08
2024-07-08 12:12:05,783 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.9 pTM=0.632 ipTM=0.168 tol=4.88
2024-07-08 12:12:20,820 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.9 pTM=0.631 ipTM=0.163 tol=5.23
2024-07-08 12:12:35,854 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68 pTM=0.632 ipTM=0.171 tol=5.8
2024-07-08 12:12:50,885 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=67.9 pTM=0.63 ipTM=0.17 tol=6.06
2024-07-08 12:13:05,917 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68 pTM=0.633 ipTM=0.166 tol=2.31
2024-07-08 12:13:20,944 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.9 pTM=0.632 ipTM=0.16 tol=6.2
2024-07-08 12:13:35,969 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.8 pTM=0.631 ipTM=0.164 tol=4.87
2024-07-08 12:13:51,001 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.8 pTM=0.629 ipTM=0.159 tol=4.52
2024-07-08 12:14:06,037 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.9 pTM=0.631 ipTM=0.166 tol=3.78
2024-07-08 12:14:06,037 alphafold2_multimer_v3_model_1_seed_000 took 614.2s (30 recycles)
2024-07-08 12:14:21,541 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=67.4 pTM=0.617 ipTM=0.139
2024-07-08 12:14:36,587 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.2 pTM=0.63 ipTM=0.141 tol=17.5
2024-07-08 12:14:51,631 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.2 pTM=0.63 ipTM=0.151 tol=4.12
2024-07-08 12:15:06,683 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.5 pTM=0.631 ipTM=0.167 tol=3.22
2024-07-08 12:15:21,745 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.2 pTM=0.627 ipTM=0.168 tol=3.03
2024-07-08 12:15:36,804 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.2 pTM=0.63 ipTM=0.169 tol=2.24
2024-07-08 12:15:51,874 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=67.4 pTM=0.63 ipTM=0.164 tol=2.55
2024-07-08 12:16:06,942 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.2 pTM=0.625 ipTM=0.15 tol=3.82
2024-07-08 12:16:22,009 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.9 pTM=0.624 ipTM=0.148 tol=3.37
2024-07-08 12:16:37,081 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=67.2 pTM=0.624 ipTM=0.147 tol=3.01
2024-07-08 12:16:52,145 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.9 pTM=0.623 ipTM=0.144 tol=2.75
2024-07-08 12:17:07,215 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=67.1 pTM=0.623 ipTM=0.151 tol=3.14
2024-07-08 12:17:22,277 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=67.2 pTM=0.622 ipTM=0.171 tol=6.11
2024-07-08 12:17:37,337 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=67.3 pTM=0.622 ipTM=0.175 tol=2.99
2024-07-08 12:17:52,394 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.4 pTM=0.623 ipTM=0.183 tol=2.67
2024-07-08 12:18:07,453 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=67.6 pTM=0.625 ipTM=0.177 tol=2.84
2024-07-08 12:18:22,506 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=67.5 pTM=0.623 ipTM=0.178 tol=4.73
2024-07-08 12:18:37,565 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=67.8 pTM=0.625 ipTM=0.182 tol=3.9
2024-07-08 12:18:52,620 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.7 pTM=0.625 ipTM=0.185 tol=3.49
2024-07-08 12:19:07,679 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.7 pTM=0.624 ipTM=0.179 tol=2.55
2024-07-08 12:19:22,744 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=67.7 pTM=0.623 ipTM=0.18 tol=2.88
2024-07-08 12:19:37,797 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=67.6 pTM=0.622 ipTM=0.184 tol=2.5
2024-07-08 12:19:52,874 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.6 pTM=0.623 ipTM=0.188 tol=1.92
2024-07-08 12:20:07,942 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=67.8 pTM=0.625 ipTM=0.189 tol=1.93
2024-07-08 12:20:23,006 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.7 pTM=0.623 ipTM=0.182 tol=1.55
2024-07-08 12:20:38,062 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=67.8 pTM=0.624 ipTM=0.181 tol=1.7
2024-07-08 12:20:53,117 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=67.8 pTM=0.624 ipTM=0.182 tol=3.11
2024-07-08 12:21:08,175 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=67.9 pTM=0.626 ipTM=0.19 tol=2.43
2024-07-08 12:21:23,230 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.8 pTM=0.624 ipTM=0.192 tol=3.25
2024-07-08 12:21:38,288 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.8 pTM=0.625 ipTM=0.194 tol=3.59
2024-07-08 12:21:53,353 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=67.7 pTM=0.622 ipTM=0.182 tol=3.03
2024-07-08 12:21:53,353 alphafold2_multimer_v3_model_2_seed_000 took 466.9s (30 recycles)
2024-07-08 12:22:08,860 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.9 pTM=0.597 ipTM=0.163
2024-07-08 12:22:23,896 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.6 pTM=0.622 ipTM=0.151 tol=11.5
2024-07-08 12:22:38,932 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.7 pTM=0.622 ipTM=0.163 tol=6.12
2024-07-08 12:22:53,971 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.8 pTM=0.623 ipTM=0.17 tol=3.49
2024-07-08 12:23:09,011 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.9 pTM=0.622 ipTM=0.173 tol=1.85
2024-07-08 12:23:24,043 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.8 pTM=0.625 ipTM=0.166 tol=1.78
2024-07-08 12:23:39,073 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=67.9 pTM=0.625 ipTM=0.171 tol=1.55
2024-07-08 12:23:54,097 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.8 pTM=0.624 ipTM=0.182 tol=2.25
2024-07-08 12:24:09,122 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.9 pTM=0.627 ipTM=0.182 tol=1.72
2024-07-08 12:24:24,147 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.9 pTM=0.627 ipTM=0.181 tol=2.09
2024-07-08 12:24:39,186 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68 pTM=0.629 ipTM=0.188 tol=2.22
2024-07-08 12:24:54,228 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.8 pTM=0.626 ipTM=0.187 tol=3.04
2024-07-08 12:25:09,274 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.8 pTM=0.628 ipTM=0.187 tol=2.14
2024-07-08 12:25:24,321 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.8 pTM=0.629 ipTM=0.182 tol=2.05
2024-07-08 12:25:39,364 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.6 pTM=0.625 ipTM=0.182 tol=1.84
2024-07-08 12:25:54,421 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.7 pTM=0.627 ipTM=0.176 tol=2.2
2024-07-08 12:26:09,482 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=67.8 pTM=0.626 ipTM=0.174 tol=2.22
2024-07-08 12:26:24,545 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.8 pTM=0.627 ipTM=0.173 tol=2.89
2024-07-08 12:26:39,609 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.8 pTM=0.628 ipTM=0.176 tol=3.5
2024-07-08 12:26:54,668 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.6 pTM=0.626 ipTM=0.175 tol=2.41
2024-07-08 12:27:09,735 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.7 pTM=0.626 ipTM=0.177 tol=1.76
2024-07-08 12:27:24,797 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.6 pTM=0.625 ipTM=0.178 tol=1.61
2024-07-08 12:27:39,866 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.6 pTM=0.625 ipTM=0.169 tol=1.87
2024-07-08 12:27:54,932 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.8 pTM=0.627 ipTM=0.169 tol=0.74
2024-07-08 12:28:09,995 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.6 pTM=0.625 ipTM=0.167 tol=1
2024-07-08 12:28:25,061 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.6 pTM=0.625 ipTM=0.169 tol=1.53
2024-07-08 12:28:40,128 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.7 pTM=0.627 ipTM=0.171 tol=2.14
2024-07-08 12:28:55,189 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.6 pTM=0.627 ipTM=0.174 tol=0.938
2024-07-08 12:29:10,248 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.8 pTM=0.628 ipTM=0.179 tol=0.778
2024-07-08 12:29:25,300 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.7 pTM=0.626 ipTM=0.178 tol=1.01
2024-07-08 12:29:40,357 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.8 pTM=0.626 ipTM=0.177 tol=0.979
2024-07-08 12:29:40,358 alphafold2_multimer_v3_model_3_seed_000 took 466.6s (30 recycles)
2024-07-08 12:29:55,841 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.7 pTM=0.543 ipTM=0.127
2024-07-08 12:30:10,885 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=67.2 pTM=0.613 ipTM=0.148 tol=12.5
2024-07-08 12:30:25,954 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.9 pTM=0.621 ipTM=0.16 tol=5.59
2024-07-08 12:30:41,032 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.1 pTM=0.622 ipTM=0.157 tol=3.55
2024-07-08 12:30:56,118 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=68.2 pTM=0.623 ipTM=0.158 tol=1.09
2024-07-08 12:31:11,208 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.4 pTM=0.625 ipTM=0.151 tol=2.67
2024-07-08 12:31:26,279 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.4 pTM=0.625 ipTM=0.157 tol=1.89
2024-07-08 12:31:41,350 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=68.3 pTM=0.623 ipTM=0.162 tol=3.91
2024-07-08 12:31:56,425 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68.3 pTM=0.625 ipTM=0.159 tol=3.05
2024-07-08 12:32:11,475 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.6 pTM=0.623 ipTM=0.16 tol=2.98
2024-07-08 12:32:26,543 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.3 pTM=0.625 ipTM=0.159 tol=2.9
2024-07-08 12:32:41,608 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68 pTM=0.622 ipTM=0.161 tol=1.16
2024-07-08 12:32:56,674 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68 pTM=0.624 ipTM=0.16 tol=3.12
2024-07-08 12:33:11,742 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.2 pTM=0.625 ipTM=0.164 tol=3.4
2024-07-08 12:33:26,809 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=68.1 pTM=0.623 ipTM=0.162 tol=1.91
2024-07-08 12:33:41,875 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.2 pTM=0.624 ipTM=0.153 tol=1.35
2024-07-08 12:33:56,944 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.2 pTM=0.624 ipTM=0.151 tol=2.1
2024-07-08 12:34:12,017 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.4 pTM=0.625 ipTM=0.155 tol=3.28
2024-07-08 12:34:27,075 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68.4 pTM=0.625 ipTM=0.162 tol=4.01
2024-07-08 12:34:42,148 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.2 pTM=0.625 ipTM=0.153 tol=3.33
2024-07-08 12:34:57,212 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=68.3 pTM=0.624 ipTM=0.159 tol=3.23
2024-07-08 12:35:12,285 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=68.2 pTM=0.622 ipTM=0.158 tol=1.28
2024-07-08 12:35:27,362 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=68.2 pTM=0.624 ipTM=0.157 tol=2.38
2024-07-08 12:35:42,438 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=68.2 pTM=0.624 ipTM=0.156 tol=3.6
2024-07-08 12:35:57,512 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=68.2 pTM=0.623 ipTM=0.155 tol=4.46
2024-07-08 12:36:12,585 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=68.1 pTM=0.622 ipTM=0.156 tol=5.61
2024-07-08 12:36:27,672 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=68.3 pTM=0.625 ipTM=0.157 tol=5.32
2024-07-08 12:36:42,748 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=68.2 pTM=0.625 ipTM=0.157 tol=1.12
2024-07-08 12:36:57,806 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=68.2 pTM=0.623 ipTM=0.155 tol=2.8
2024-07-08 12:37:12,875 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=68.3 pTM=0.623 ipTM=0.162 tol=1.49
2024-07-08 12:37:27,945 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68.4 pTM=0.623 ipTM=0.149 tol=2.72
2024-07-08 12:37:27,946 alphafold2_multimer_v3_model_4_seed_000 took 467.1s (30 recycles)
2024-07-08 12:37:43,423 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.1 pTM=0.582 ipTM=0.154
2024-07-08 12:37:58,472 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.8 pTM=0.619 ipTM=0.13 tol=12.9
2024-07-08 12:38:13,527 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.2 pTM=0.62 ipTM=0.142 tol=4.91
2024-07-08 12:38:28,589 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.4 pTM=0.622 ipTM=0.144 tol=5.24
2024-07-08 12:38:43,640 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.8 pTM=0.622 ipTM=0.147 tol=3.11
2024-07-08 12:38:58,696 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.8 pTM=0.623 ipTM=0.152 tol=3.22
2024-07-08 12:39:13,753 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68 pTM=0.624 ipTM=0.162 tol=3.12
2024-07-08 12:39:28,806 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.1 pTM=0.623 ipTM=0.168 tol=3.48
2024-07-08 12:39:43,853 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.2 pTM=0.625 ipTM=0.163 tol=1.88
2024-07-08 12:39:58,909 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.3 pTM=0.625 ipTM=0.162 tol=2.17
2024-07-08 12:40:13,953 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.2 pTM=0.625 ipTM=0.161 tol=1.17
2024-07-08 12:40:29,003 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.1 pTM=0.625 ipTM=0.159 tol=1.93
2024-07-08 12:40:44,059 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68 pTM=0.625 ipTM=0.158 tol=2
2024-07-08 12:40:59,117 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.1 pTM=0.625 ipTM=0.157 tol=2.99
2024-07-08 12:41:14,168 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.1 pTM=0.623 ipTM=0.16 tol=2.48
2024-07-08 12:41:29,221 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.2 pTM=0.624 ipTM=0.156 tol=1.68
2024-07-08 12:41:44,256 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.2 pTM=0.625 ipTM=0.158 tol=1.19
2024-07-08 12:41:59,306 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.2 pTM=0.625 ipTM=0.162 tol=1.27
2024-07-08 12:42:14,360 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.2 pTM=0.626 ipTM=0.168 tol=2.03
2024-07-08 12:42:29,410 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.2 pTM=0.625 ipTM=0.158 tol=2.77
2024-07-08 12:42:44,458 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.3 pTM=0.626 ipTM=0.165 tol=2.47
2024-07-08 12:42:59,510 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.2 pTM=0.623 ipTM=0.162 tol=2.27
2024-07-08 12:43:14,565 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.1 pTM=0.625 ipTM=0.157 tol=1.93
2024-07-08 12:43:29,620 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.1 pTM=0.625 ipTM=0.16 tol=1.54
2024-07-08 12:43:44,675 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.2 pTM=0.625 ipTM=0.154 tol=2.17
2024-07-08 12:43:59,719 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.2 pTM=0.624 ipTM=0.156 tol=2.15
2024-07-08 12:44:14,767 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.2 pTM=0.626 ipTM=0.157 tol=3.35
2024-07-08 12:44:29,816 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.1 pTM=0.625 ipTM=0.157 tol=3.48
2024-07-08 12:44:44,862 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.1 pTM=0.625 ipTM=0.157 tol=1.88
2024-07-08 12:44:59,909 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.2 pTM=0.625 ipTM=0.163 tol=1.4
2024-07-08 12:45:14,949 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.3 pTM=0.625 ipTM=0.157 tol=1.83
2024-07-08 12:45:14,950 alphafold2_multimer_v3_model_5_seed_000 took 466.6s (30 recycles)
2024-07-08 12:45:15,403 reranking models by 'multimer' metric
2024-07-08 12:45:16,301 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 12:46:21,801 Relaxation took 66.4s
2024-07-08 12:46:21,801 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=67.7 pTM=0.622 ipTM=0.182
2024-07-08 12:47:07,729 Relaxation took 45.9s
2024-07-08 12:47:07,729 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.8 pTM=0.626 ipTM=0.177
2024-07-08 12:47:50,051 Relaxation took 42.3s
2024-07-08 12:47:50,052 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.9 pTM=0.631 ipTM=0.166
2024-07-08 12:48:18,491 Relaxation took 28.4s
2024-07-08 12:48:18,491 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.3 pTM=0.625 ipTM=0.157
2024-07-08 12:49:03,745 Relaxation took 45.3s
2024-07-08 12:49:03,745 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68.4 pTM=0.623 ipTM=0.149
2024-07-08 12:49:05,520 Done