2024-07-08 11:49:54,314 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 11:49:55,367 Running on GPU
2024-07-08 11:49:59,771 Found 6 citations for tools or databases
2024-07-08 11:49:59,771 Query 1/1: ABD18_NELL2 (length 1230)
2024-07-08 11:50:00,295 Sleeping for 5s. Reason: PENDING
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2024-07-08 11:51:27,961 Sleeping for 5s. Reason: RUNNING
2024-07-08 11:51:33,396 Sleeping for 8s. Reason: RUNNING
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2024-07-08 11:51:51,230 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:52:00,662 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:52:11,096 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:52:17,844 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:52:27,287 Sleeping for 6s. Reason: RUNNING
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2024-07-08 11:52:39,118 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:52:46,358 Sleeping for 8s. Reason: RUNNING
2024-07-08 11:52:54,788 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:53:02,206 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:53:08,614 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:53:19,042 Sleeping for 7s. Reason: RUNNING
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2024-07-08 11:53:35,895 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:53:43,334 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:54:05,080 Sleeping for 10s. Reason: PENDING
2024-07-08 11:54:15,538 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:54:26,462 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:54:35,892 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:54:45,313 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:54:55,758 Sleeping for 5s. Reason: RUNNING
2024-07-08 11:55:01,170 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:55:11,597 Sleeping for 8s. Reason: RUNNING
2024-07-08 11:55:20,017 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:55:27,440 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:55:37,867 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:55:48,283 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:56:01,379 Setting max_seq=508, max_extra_seq=2048
2024-07-08 11:59:05,054 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.9 pTM=0.398 ipTM=0.199
2024-07-08 11:59:42,164 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.1 pTM=0.388 ipTM=0.189 tol=8.62
2024-07-08 12:00:19,429 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=68.3 pTM=0.371 ipTM=0.187 tol=6.08
2024-07-08 12:00:56,763 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.4 pTM=0.435 ipTM=0.398 tol=14.7
2024-07-08 12:01:34,104 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.1 pTM=0.468 ipTM=0.462 tol=2.71
2024-07-08 12:02:11,502 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.9 pTM=0.43 ipTM=0.377 tol=2.13
2024-07-08 12:02:48,914 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=68.9 pTM=0.416 ipTM=0.334 tol=3.39
2024-07-08 12:03:26,364 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.4 pTM=0.379 ipTM=0.224 tol=6.43
2024-07-08 12:04:03,798 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.2 pTM=0.376 ipTM=0.208 tol=6.7
2024-07-08 12:04:41,220 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.3 pTM=0.434 ipTM=0.395 tol=5.88
2024-07-08 12:05:18,635 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=69.7 pTM=0.452 ipTM=0.411 tol=2.73
2024-07-08 12:05:56,039 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.8 pTM=0.427 ipTM=0.361 tol=1.44
2024-07-08 12:06:33,433 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=68.9 pTM=0.419 ipTM=0.32 tol=1.7
2024-07-08 12:07:10,833 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=68.2 pTM=0.394 ipTM=0.258 tol=3.21
2024-07-08 12:07:48,250 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.8 pTM=0.373 ipTM=0.202 tol=3.02
2024-07-08 12:08:25,630 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.8 pTM=0.378 ipTM=0.217 tol=3.46
2024-07-08 12:09:03,030 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68.2 pTM=0.378 ipTM=0.222 tol=1.34
2024-07-08 12:09:40,426 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.3 pTM=0.375 ipTM=0.21 tol=1.42
2024-07-08 12:10:17,838 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.6 pTM=0.371 ipTM=0.2 tol=4.2
2024-07-08 12:10:55,221 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.3 pTM=0.412 ipTM=0.323 tol=3.94
2024-07-08 12:11:32,588 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=68.6 pTM=0.413 ipTM=0.308 tol=2.54
2024-07-08 12:12:09,970 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.2 pTM=0.391 ipTM=0.253 tol=1.09
2024-07-08 12:12:47,371 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.1 pTM=0.375 ipTM=0.213 tol=1.67
2024-07-08 12:13:24,761 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.2 pTM=0.371 ipTM=0.196 tol=2.15
2024-07-08 12:14:02,155 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.9 pTM=0.37 ipTM=0.196 tol=1.86
2024-07-08 12:14:39,548 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.6 pTM=0.396 ipTM=0.276 tol=3.6
2024-07-08 12:15:16,940 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.9 pTM=0.392 ipTM=0.257 tol=1.09
2024-07-08 12:15:54,355 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.6 pTM=0.372 ipTM=0.198 tol=2.2
2024-07-08 12:16:31,746 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.4 pTM=0.401 ipTM=0.296 tol=2.49
2024-07-08 12:17:09,120 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69.8 pTM=0.472 ipTM=0.489 tol=2.65
2024-07-08 12:17:46,455 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=69.5 pTM=0.468 ipTM=0.472 tol=1.84
2024-07-08 12:17:46,456 alphafold2_multimer_v3_model_1_seed_000 took 1300.6s (30 recycles)
2024-07-08 12:18:24,727 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.3 pTM=0.363 ipTM=0.192
2024-07-08 12:19:02,114 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.2 pTM=0.426 ipTM=0.199 tol=9.07
2024-07-08 12:19:39,553 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=70.8 pTM=0.414 ipTM=0.199 tol=12.3
2024-07-08 12:20:16,902 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.9 pTM=0.438 ipTM=0.347 tol=9.31
2024-07-08 12:20:54,240 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.1 pTM=0.473 ipTM=0.445 tol=2.19
2024-07-08 12:21:31,578 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=71.6 pTM=0.447 ipTM=0.399 tol=1.97
2024-07-08 12:22:08,927 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=71.3 pTM=0.422 ipTM=0.359 tol=1.55
2024-07-08 12:22:46,273 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=71.2 pTM=0.408 ipTM=0.309 tol=1.85
2024-07-08 12:23:23,600 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=71.2 pTM=0.404 ipTM=0.306 tol=1.13
2024-07-08 12:24:00,921 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.6 pTM=0.394 ipTM=0.279 tol=5.16
2024-07-08 12:24:38,247 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.4 pTM=0.388 ipTM=0.262 tol=5.98
2024-07-08 12:25:15,626 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.5 pTM=0.394 ipTM=0.298 tol=3.62
2024-07-08 12:25:53,002 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.3 pTM=0.383 ipTM=0.262 tol=2.65
2024-07-08 12:26:30,376 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.9 pTM=0.375 ipTM=0.25 tol=5.46
2024-07-08 12:27:07,768 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.4 pTM=0.38 ipTM=0.25 tol=4.32
2024-07-08 12:27:45,153 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.1 pTM=0.375 ipTM=0.25 tol=3.16
2024-07-08 12:28:22,556 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.4 pTM=0.377 ipTM=0.253 tol=3.33
2024-07-08 12:28:59,916 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.3 pTM=0.383 ipTM=0.248 tol=2.95
2024-07-08 12:29:37,290 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.7 pTM=0.393 ipTM=0.289 tol=3.1
2024-07-08 12:30:14,651 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.6 pTM=0.398 ipTM=0.308 tol=1.39
2024-07-08 12:30:52,031 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.8 pTM=0.394 ipTM=0.287 tol=1.46
2024-07-08 12:31:29,395 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.6 pTM=0.406 ipTM=0.34 tol=2.99
2024-07-08 12:32:06,757 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.9 pTM=0.406 ipTM=0.323 tol=3.07
2024-07-08 12:32:44,107 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.9 pTM=0.406 ipTM=0.32 tol=2.82
2024-07-08 12:33:21,451 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=71.1 pTM=0.403 ipTM=0.304 tol=2.33
2024-07-08 12:33:58,794 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70.8 pTM=0.407 ipTM=0.316 tol=1.85
2024-07-08 12:34:36,166 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.2 pTM=0.39 ipTM=0.276 tol=2.06
2024-07-08 12:35:13,528 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.6 pTM=0.375 ipTM=0.251 tol=3.11
2024-07-08 12:35:50,891 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=70.4 pTM=0.395 ipTM=0.299 tol=2.29
2024-07-08 12:36:28,245 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=70.5 pTM=0.419 ipTM=0.359 tol=1.02
2024-07-08 12:37:05,592 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=70.9 pTM=0.42 ipTM=0.359 tol=1.91
2024-07-08 12:37:05,594 alphafold2_multimer_v3_model_2_seed_000 took 1158.2s (30 recycles)
2024-07-08 12:37:43,925 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65 pTM=0.354 ipTM=0.164
2024-07-08 12:38:21,364 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.3 pTM=0.381 ipTM=0.185 tol=8.69
2024-07-08 12:38:58,825 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.6 pTM=0.386 ipTM=0.198 tol=6.4
2024-07-08 12:39:36,296 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.8 pTM=0.395 ipTM=0.206 tol=5.4
2024-07-08 12:40:13,747 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66.8 pTM=0.396 ipTM=0.208 tol=2.9
2024-07-08 12:40:51,186 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=66.5 pTM=0.399 ipTM=0.211 tol=1.52
2024-07-08 12:41:28,619 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.8 pTM=0.402 ipTM=0.217 tol=3.03
2024-07-08 12:42:06,044 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.1 pTM=0.413 ipTM=0.223 tol=1.39
2024-07-08 12:42:43,467 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.8 pTM=0.415 ipTM=0.22 tol=2.38
2024-07-08 12:43:20,930 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.6 pTM=0.416 ipTM=0.216 tol=6.14
2024-07-08 12:43:58,275 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.8 pTM=0.46 ipTM=0.345 tol=4.39
2024-07-08 12:44:35,569 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=69.8 pTM=0.477 ipTM=0.411 tol=2.72
2024-07-08 12:45:12,862 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=70 pTM=0.484 ipTM=0.432 tol=1.5
2024-07-08 12:45:50,153 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=70.3 pTM=0.489 ipTM=0.429 tol=2.51
2024-07-08 12:46:27,445 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.2 pTM=0.478 ipTM=0.406 tol=1.38
2024-07-08 12:47:04,760 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=70.3 pTM=0.48 ipTM=0.407 tol=1.05
2024-07-08 12:47:42,064 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=70.4 pTM=0.482 ipTM=0.4 tol=0.966
2024-07-08 12:48:19,354 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=70.6 pTM=0.494 ipTM=0.439 tol=0.906
2024-07-08 12:48:56,644 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=70.6 pTM=0.489 ipTM=0.422 tol=1.35
2024-07-08 12:49:33,942 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=70.6 pTM=0.496 ipTM=0.439 tol=2.11
2024-07-08 12:50:11,246 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=70.9 pTM=0.498 ipTM=0.432 tol=1.78
2024-07-08 12:50:48,501 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=70.9 pTM=0.505 ipTM=0.455 tol=1.11
2024-07-08 12:51:25,767 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=70.6 pTM=0.49 ipTM=0.411 tol=1.31
2024-07-08 12:52:03,036 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=70.7 pTM=0.487 ipTM=0.402 tol=1.57
2024-07-08 12:52:40,304 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=71 pTM=0.505 ipTM=0.438 tol=1
2024-07-08 12:53:17,590 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=70.6 pTM=0.494 ipTM=0.404 tol=1.04
2024-07-08 12:53:54,879 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=70.6 pTM=0.49 ipTM=0.391 tol=1.17
2024-07-08 12:54:32,134 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=70.5 pTM=0.502 ipTM=0.427 tol=2.74
2024-07-08 12:55:09,385 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=70.9 pTM=0.508 ipTM=0.435 tol=0.705
2024-07-08 12:55:46,652 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=70.5 pTM=0.504 ipTM=0.443 tol=0.775
2024-07-08 12:56:23,906 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=70.9 pTM=0.5 ipTM=0.422 tol=1.45
2024-07-08 12:56:23,907 alphafold2_multimer_v3_model_3_seed_000 took 1157.4s (30 recycles)
2024-07-08 12:57:02,108 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.8 pTM=0.374 ipTM=0.191
2024-07-08 12:57:39,474 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.6 pTM=0.4 ipTM=0.206 tol=14.7
2024-07-08 12:58:16,885 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.6 pTM=0.402 ipTM=0.195 tol=6.93
2024-07-08 12:58:54,305 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=68.9 pTM=0.391 ipTM=0.193 tol=2.88
2024-07-08 12:59:31,715 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=69 pTM=0.392 ipTM=0.203 tol=2.78
2024-07-08 13:00:09,157 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68.9 pTM=0.387 ipTM=0.197 tol=2.34
2024-07-08 13:00:46,612 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=69.2 pTM=0.392 ipTM=0.199 tol=1.49
2024-07-08 13:01:24,033 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=69.8 pTM=0.4 ipTM=0.201 tol=1.21
2024-07-08 13:02:01,467 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.1 pTM=0.405 ipTM=0.2 tol=1.95
2024-07-08 13:02:38,887 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70 pTM=0.405 ipTM=0.201 tol=1.36
2024-07-08 13:03:16,318 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=69.9 pTM=0.404 ipTM=0.199 tol=5.45
2024-07-08 13:03:53,729 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.1 pTM=0.404 ipTM=0.2 tol=1.79
2024-07-08 13:04:31,134 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70 pTM=0.405 ipTM=0.207 tol=4.64
2024-07-08 13:05:08,576 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.1 pTM=0.411 ipTM=0.2 tol=3.52
2024-07-08 13:05:46,015 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.6 pTM=0.408 ipTM=0.203 tol=3.79
2024-07-08 13:06:23,428 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.4 pTM=0.415 ipTM=0.204 tol=6.14
2024-07-08 13:07:00,882 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.3 pTM=0.42 ipTM=0.201 tol=3.67
2024-07-08 13:07:38,308 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.5 pTM=0.425 ipTM=0.206 tol=4.94
2024-07-08 13:08:15,780 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.8 pTM=0.423 ipTM=0.218 tol=4.66
2024-07-08 13:08:53,236 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.7 pTM=0.427 ipTM=0.235 tol=3.37
2024-07-08 13:09:30,720 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=69.8 pTM=0.423 ipTM=0.207 tol=10.5
2024-07-08 13:10:08,123 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.1 pTM=0.426 ipTM=0.205 tol=6.49
2024-07-08 13:10:45,532 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.6 pTM=0.433 ipTM=0.211 tol=5.84
2024-07-08 13:11:22,938 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.3 pTM=0.432 ipTM=0.207 tol=3.42
2024-07-08 13:12:00,333 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.7 pTM=0.435 ipTM=0.205 tol=2.23
2024-07-08 13:12:37,766 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.9 pTM=0.436 ipTM=0.21 tol=4.94
2024-07-08 13:13:15,184 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.6 pTM=0.431 ipTM=0.205 tol=3.34
2024-07-08 13:13:52,621 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.1 pTM=0.428 ipTM=0.205 tol=7.13
2024-07-08 13:14:30,065 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.2 pTM=0.431 ipTM=0.202 tol=3.52
2024-07-08 13:15:07,506 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.1 pTM=0.425 ipTM=0.205 tol=4.69
2024-07-08 13:15:44,930 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.4 pTM=0.427 ipTM=0.209 tol=5.21
2024-07-08 13:15:44,931 alphafold2_multimer_v3_model_4_seed_000 took 1160.1s (30 recycles)
2024-07-08 13:16:23,315 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.9 pTM=0.361 ipTM=0.15
2024-07-08 13:17:00,768 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.4 pTM=0.364 ipTM=0.17 tol=11.7
2024-07-08 13:17:38,235 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.9 pTM=0.359 ipTM=0.186 tol=5.83
2024-07-08 13:18:15,695 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.1 pTM=0.37 ipTM=0.195 tol=3.15
2024-07-08 13:18:53,165 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.6 pTM=0.376 ipTM=0.198 tol=2.71
2024-07-08 13:19:30,628 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.4 pTM=0.373 ipTM=0.2 tol=2.71
2024-07-08 13:20:08,100 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.4 pTM=0.376 ipTM=0.201 tol=2.09
2024-07-08 13:20:45,572 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.6 pTM=0.379 ipTM=0.202 tol=1.95
2024-07-08 13:21:23,068 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.8 pTM=0.378 ipTM=0.201 tol=4.41
2024-07-08 13:22:00,540 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.5 pTM=0.376 ipTM=0.202 tol=7.17
2024-07-08 13:22:37,988 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.6 pTM=0.377 ipTM=0.209 tol=6.12
2024-07-08 13:23:15,407 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.1 pTM=0.385 ipTM=0.217 tol=3.51
2024-07-08 13:23:52,803 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.7 pTM=0.388 ipTM=0.245 tol=3.98
2024-07-08 13:24:30,164 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.3 pTM=0.405 ipTM=0.339 tol=6.05
2024-07-08 13:25:07,523 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.3 pTM=0.395 ipTM=0.289 tol=6.16
2024-07-08 13:25:44,908 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.5 pTM=0.391 ipTM=0.252 tol=3.5
2024-07-08 13:26:22,278 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.9 pTM=0.4 ipTM=0.281 tol=2.13
2024-07-08 13:26:59,624 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.1 pTM=0.405 ipTM=0.27 tol=2.29
2024-07-08 13:27:36,955 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68 pTM=0.428 ipTM=0.317 tol=3.55
2024-07-08 13:28:14,269 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.8 pTM=0.427 ipTM=0.316 tol=5.84
2024-07-08 13:28:51,581 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.5 pTM=0.452 ipTM=0.387 tol=6.05
2024-07-08 13:29:28,861 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.8 pTM=0.433 ipTM=0.339 tol=3.23
2024-07-08 13:30:06,162 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68 pTM=0.437 ipTM=0.342 tol=0.702
2024-07-08 13:30:43,495 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.3 pTM=0.447 ipTM=0.367 tol=3.39
2024-07-08 13:31:20,803 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.5 pTM=0.453 ipTM=0.364 tol=5.12
2024-07-08 13:31:58,139 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.8 pTM=0.425 ipTM=0.323 tol=5.73
2024-07-08 13:32:35,468 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.7 pTM=0.439 ipTM=0.346 tol=1.27
2024-07-08 13:33:12,786 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.7 pTM=0.437 ipTM=0.35 tol=2.21
2024-07-08 13:33:50,126 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.6 pTM=0.436 ipTM=0.347 tol=2.47
2024-07-08 13:34:27,462 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.7 pTM=0.441 ipTM=0.357 tol=6.5
2024-07-08 13:35:04,812 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.7 pTM=0.437 ipTM=0.36 tol=6.03
2024-07-08 13:35:04,813 alphafold2_multimer_v3_model_5_seed_000 took 1159.0s (30 recycles)
2024-07-08 13:35:05,727 reranking models by 'multimer' metric
2024-07-08 13:35:09,503 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 13:36:50,106 Relaxation took 104.4s
2024-07-08 13:36:50,106 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=69.5 pTM=0.468 ipTM=0.472
2024-07-08 13:38:31,664 Relaxation took 101.6s
2024-07-08 13:38:31,664 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=70.9 pTM=0.5 ipTM=0.422
2024-07-08 13:40:38,733 Relaxation took 127.1s
2024-07-08 13:40:38,733 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.7 pTM=0.437 ipTM=0.36
2024-07-08 13:42:25,883 Relaxation took 107.1s
2024-07-08 13:42:25,883 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.9 pTM=0.42 ipTM=0.359
2024-07-08 13:44:12,918 Relaxation took 107.0s
2024-07-08 13:44:12,918 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.4 pTM=0.427 ipTM=0.209
2024-07-08 13:44:15,807 Done