2024-07-08 11:49:54,314 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 11:49:55,367 Running on GPU
2024-07-08 11:49:59,771 Found 6 citations for tools or databases
2024-07-08 11:49:59,771 Query 1/1: ABHD5_PP16B (length 916)
2024-07-08 11:50:00,343 Sleeping for 10s. Reason: PENDING
2024-07-08 11:50:10,760 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:50:17,193 Sleeping for 8s. Reason: RUNNING
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2024-07-08 11:51:05,767 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:51:12,194 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:51:19,609 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:51:30,027 Sleeping for 8s. Reason: RUNNING
2024-07-08 11:51:38,450 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:51:45,866 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:51:53,307 Sleeping for 5s. Reason: RUNNING
2024-07-08 11:51:58,727 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:52:09,140 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:52:19,596 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:52:30,019 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:52:39,469 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:52:45,903 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:52:52,333 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:52:59,899 Sleeping for 6s. Reason: RUNNING
2024-07-08 11:53:06,667 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:53:14,095 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:53:23,513 Sleeping for 5s. Reason: RUNNING
2024-07-08 11:53:32,310 Sleeping for 7s. Reason: PENDING
2024-07-08 11:53:39,743 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:53:50,155 Sleeping for 8s. Reason: RUNNING
2024-07-08 11:53:58,583 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:54:08,992 Sleeping for 5s. Reason: RUNNING
2024-07-08 11:54:14,416 Sleeping for 5s. Reason: RUNNING
2024-07-08 11:54:19,847 Sleeping for 5s. Reason: RUNNING
2024-07-08 11:54:25,298 Sleeping for 8s. Reason: RUNNING
2024-07-08 11:54:33,721 Sleeping for 10s. Reason: RUNNING
2024-07-08 11:54:44,658 Sleeping for 5s. Reason: RUNNING
2024-07-08 11:54:50,091 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:54:59,559 Sleeping for 8s. Reason: RUNNING
2024-07-08 11:55:07,977 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:55:17,419 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:55:27,018 Sleeping for 7s. Reason: RUNNING
2024-07-08 11:55:34,437 Sleeping for 9s. Reason: RUNNING
2024-07-08 11:55:51,604 Setting max_seq=508, max_extra_seq=2048
2024-07-08 11:58:18,160 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.9 pTM=0.443 ipTM=0.269
2024-07-08 11:58:35,617 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.3 pTM=0.429 ipTM=0.193 tol=6.37
2024-07-08 11:58:53,108 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=60.6 pTM=0.44 ipTM=0.266 tol=4.06
2024-07-08 11:59:10,644 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.1 pTM=0.423 ipTM=0.198 tol=3.89
2024-07-08 11:59:28,188 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.3 pTM=0.43 ipTM=0.235 tol=2.81
2024-07-08 11:59:45,759 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.7 pTM=0.424 ipTM=0.205 tol=3.63
2024-07-08 12:00:03,350 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.4 pTM=0.426 ipTM=0.218 tol=3.62
2024-07-08 12:00:20,956 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.5 pTM=0.424 ipTM=0.195 tol=2.74
2024-07-08 12:00:38,578 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.6 pTM=0.426 ipTM=0.215 tol=2.92
2024-07-08 12:00:56,201 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.6 pTM=0.424 ipTM=0.2 tol=2.45
2024-07-08 12:01:13,822 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.3 pTM=0.424 ipTM=0.209 tol=2.2
2024-07-08 12:01:31,463 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.1 pTM=0.425 ipTM=0.211 tol=2.76
2024-07-08 12:01:49,089 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.2 pTM=0.423 ipTM=0.205 tol=1.96
2024-07-08 12:02:06,727 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=59.8 pTM=0.425 ipTM=0.198 tol=3.29
2024-07-08 12:02:24,361 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.1 pTM=0.424 ipTM=0.206 tol=4.49
2024-07-08 12:02:42,012 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.6 pTM=0.426 ipTM=0.207 tol=4.34
2024-07-08 12:02:59,648 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.2 pTM=0.427 ipTM=0.232 tol=2.41
2024-07-08 12:03:17,292 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=60.7 pTM=0.424 ipTM=0.207 tol=3.05
2024-07-08 12:03:34,935 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=60.3 pTM=0.427 ipTM=0.225 tol=5.51
2024-07-08 12:03:52,588 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=60.5 pTM=0.423 ipTM=0.21 tol=4.13
2024-07-08 12:04:10,235 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.2 pTM=0.425 ipTM=0.214 tol=2.87
2024-07-08 12:04:27,883 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.4 pTM=0.423 ipTM=0.214 tol=2.9
2024-07-08 12:04:45,532 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.1 pTM=0.426 ipTM=0.237 tol=5.61
2024-07-08 12:05:03,198 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.4 pTM=0.422 ipTM=0.202 tol=3.55
2024-07-08 12:05:20,855 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=59.8 pTM=0.422 ipTM=0.209 tol=4.02
2024-07-08 12:05:38,514 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.6 pTM=0.418 ipTM=0.211 tol=2.81
2024-07-08 12:05:56,167 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60.1 pTM=0.425 ipTM=0.215 tol=3.11
2024-07-08 12:06:13,819 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.4 pTM=0.424 ipTM=0.223 tol=1.69
2024-07-08 12:06:31,463 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60 pTM=0.423 ipTM=0.209 tol=7.09
2024-07-08 12:06:49,114 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.9 pTM=0.427 ipTM=0.232 tol=3.76
2024-07-08 12:07:06,771 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.2 pTM=0.427 ipTM=0.205 tol=6
2024-07-08 12:07:06,772 alphafold2_multimer_v3_model_1_seed_000 took 669.0s (30 recycles)
2024-07-08 12:07:24,942 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.2 pTM=0.432 ipTM=0.236
2024-07-08 12:07:42,642 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.5 pTM=0.42 ipTM=0.219 tol=10.8
2024-07-08 12:08:00,319 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.6 pTM=0.421 ipTM=0.231 tol=8.17
2024-07-08 12:08:18,013 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.7 pTM=0.411 ipTM=0.2 tol=4.11
2024-07-08 12:08:35,700 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.6 pTM=0.417 ipTM=0.224 tol=4.67
2024-07-08 12:08:53,384 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.5 pTM=0.415 ipTM=0.212 tol=2.99
2024-07-08 12:09:11,078 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.7 pTM=0.417 ipTM=0.218 tol=5.95
2024-07-08 12:09:28,760 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.6 pTM=0.416 ipTM=0.216 tol=3.9
2024-07-08 12:09:46,451 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.7 pTM=0.417 ipTM=0.221 tol=3.44
2024-07-08 12:10:04,132 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.5 pTM=0.414 ipTM=0.218 tol=3.79
2024-07-08 12:10:21,821 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=61.7 pTM=0.414 ipTM=0.215 tol=1.91
2024-07-08 12:10:39,497 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.6 pTM=0.417 ipTM=0.229 tol=1.67
2024-07-08 12:10:57,185 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.5 pTM=0.412 ipTM=0.219 tol=1.88
2024-07-08 12:11:14,863 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=61.6 pTM=0.416 ipTM=0.224 tol=1.9
2024-07-08 12:11:32,546 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.7 pTM=0.413 ipTM=0.213 tol=2.73
2024-07-08 12:11:50,240 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62 pTM=0.417 ipTM=0.226 tol=2.5
2024-07-08 12:12:07,936 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.7 pTM=0.413 ipTM=0.207 tol=3.12
2024-07-08 12:12:25,628 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62 pTM=0.421 ipTM=0.242 tol=1.79
2024-07-08 12:12:43,328 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.9 pTM=0.414 ipTM=0.214 tol=1.7
2024-07-08 12:13:01,010 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=61.9 pTM=0.418 ipTM=0.221 tol=1.5
2024-07-08 12:13:18,693 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.8 pTM=0.415 ipTM=0.214 tol=1.41
2024-07-08 12:13:36,363 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=61.4 pTM=0.416 ipTM=0.221 tol=1.37
2024-07-08 12:13:54,048 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.6 pTM=0.413 ipTM=0.217 tol=1.56
2024-07-08 12:14:11,728 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=61.6 pTM=0.417 ipTM=0.223 tol=1.58
2024-07-08 12:14:29,413 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.3 pTM=0.413 ipTM=0.219 tol=2.24
2024-07-08 12:14:47,086 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=61.4 pTM=0.416 ipTM=0.224 tol=2.14
2024-07-08 12:15:04,778 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.5 pTM=0.413 ipTM=0.212 tol=1.46
2024-07-08 12:15:22,455 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=61.5 pTM=0.417 ipTM=0.231 tol=1.86
2024-07-08 12:15:40,141 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.6 pTM=0.413 ipTM=0.208 tol=1.61
2024-07-08 12:15:57,827 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.7 pTM=0.416 ipTM=0.221 tol=1.9
2024-07-08 12:16:15,515 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.5 pTM=0.414 ipTM=0.216 tol=1.76
2024-07-08 12:16:15,516 alphafold2_multimer_v3_model_2_seed_000 took 548.2s (30 recycles)
2024-07-08 12:16:33,756 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60 pTM=0.41 ipTM=0.14
2024-07-08 12:16:51,494 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.4 pTM=0.415 ipTM=0.185 tol=22.2
2024-07-08 12:17:09,231 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.8 pTM=0.405 ipTM=0.203 tol=16.5
2024-07-08 12:17:26,981 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.4 pTM=0.405 ipTM=0.186 tol=8.99
2024-07-08 12:17:44,700 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.5 pTM=0.41 ipTM=0.194 tol=6.54
2024-07-08 12:18:02,414 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.4 pTM=0.403 ipTM=0.164 tol=4.82
2024-07-08 12:18:20,166 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.2 pTM=0.407 ipTM=0.195 tol=9.62
2024-07-08 12:18:37,899 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.4 pTM=0.407 ipTM=0.16 tol=7.71
2024-07-08 12:18:55,665 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.5 pTM=0.407 ipTM=0.165 tol=7.41
2024-07-08 12:19:13,397 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.6 pTM=0.406 ipTM=0.158 tol=9.59
2024-07-08 12:19:31,151 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.4 pTM=0.406 ipTM=0.158 tol=6.35
2024-07-08 12:19:48,878 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.6 pTM=0.408 ipTM=0.163 tol=6.93
2024-07-08 12:20:06,638 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.7 pTM=0.411 ipTM=0.167 tol=13.5
2024-07-08 12:20:24,380 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.8 pTM=0.407 ipTM=0.174 tol=14.7
2024-07-08 12:20:42,126 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=59.6 pTM=0.407 ipTM=0.156 tol=5.34
2024-07-08 12:20:59,840 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.7 pTM=0.406 ipTM=0.162 tol=4.08
2024-07-08 12:21:17,566 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60 pTM=0.412 ipTM=0.167 tol=3.88
2024-07-08 12:21:35,290 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.6 pTM=0.409 ipTM=0.147 tol=5.55
2024-07-08 12:21:53,030 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.7 pTM=0.418 ipTM=0.201 tol=15.9
2024-07-08 12:22:10,770 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=58.8 pTM=0.403 ipTM=0.147 tol=17.1
2024-07-08 12:22:28,484 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=59.3 pTM=0.406 ipTM=0.159 tol=5.71
2024-07-08 12:22:46,185 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58.7 pTM=0.407 ipTM=0.168 tol=3.96
2024-07-08 12:23:03,882 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=59 pTM=0.402 ipTM=0.164 tol=4.48
2024-07-08 12:23:21,584 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.3 pTM=0.406 ipTM=0.164 tol=6
2024-07-08 12:23:39,287 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=59.8 pTM=0.414 ipTM=0.157 tol=5.86
2024-07-08 12:23:56,979 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.2 pTM=0.405 ipTM=0.149 tol=5.33
2024-07-08 12:24:14,723 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=59 pTM=0.407 ipTM=0.15 tol=8.15
2024-07-08 12:24:32,446 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.2 pTM=0.405 ipTM=0.148 tol=7.51
2024-07-08 12:24:50,165 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=59.8 pTM=0.41 ipTM=0.157 tol=8.61
2024-07-08 12:25:07,868 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.2 pTM=0.408 ipTM=0.151 tol=6.78
2024-07-08 12:25:25,590 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.2 pTM=0.413 ipTM=0.151 tol=6.63
2024-07-08 12:25:25,590 alphafold2_multimer_v3_model_3_seed_000 took 549.5s (30 recycles)
2024-07-08 12:25:43,802 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.8 pTM=0.436 ipTM=0.28
2024-07-08 12:26:01,494 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.2 pTM=0.427 ipTM=0.232 tol=12.5
2024-07-08 12:26:19,191 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59 pTM=0.42 ipTM=0.233 tol=10.7
2024-07-08 12:26:36,882 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.5 pTM=0.417 ipTM=0.266 tol=5.47
2024-07-08 12:26:54,560 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.2 pTM=0.414 ipTM=0.243 tol=5.03
2024-07-08 12:27:12,252 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58 pTM=0.412 ipTM=0.257 tol=6.23
2024-07-08 12:27:29,936 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.1 pTM=0.405 ipTM=0.223 tol=5.77
2024-07-08 12:27:47,622 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.1 pTM=0.409 ipTM=0.254 tol=5.98
2024-07-08 12:28:05,308 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.2 pTM=0.406 ipTM=0.226 tol=5.52
2024-07-08 12:28:22,992 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.8 pTM=0.41 ipTM=0.26 tol=5.54
2024-07-08 12:28:40,659 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.9 pTM=0.404 ipTM=0.223 tol=5.77
2024-07-08 12:28:58,339 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.8 pTM=0.41 ipTM=0.254 tol=7.63
2024-07-08 12:29:16,023 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.7 pTM=0.403 ipTM=0.222 tol=6.09
2024-07-08 12:29:33,707 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58 pTM=0.406 ipTM=0.227 tol=5.52
2024-07-08 12:29:51,385 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.1 pTM=0.4 ipTM=0.205 tol=6.07
2024-07-08 12:30:09,061 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58 pTM=0.405 ipTM=0.24 tol=7.46
2024-07-08 12:30:26,743 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58 pTM=0.403 ipTM=0.22 tol=5.95
2024-07-08 12:30:44,436 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.3 pTM=0.405 ipTM=0.232 tol=6.48
2024-07-08 12:31:02,109 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.1 pTM=0.404 ipTM=0.225 tol=5.72
2024-07-08 12:31:19,790 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.2 pTM=0.408 ipTM=0.246 tol=5.64
2024-07-08 12:31:37,466 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.2 pTM=0.404 ipTM=0.216 tol=5.76
2024-07-08 12:31:55,147 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.8 pTM=0.403 ipTM=0.236 tol=5.52
2024-07-08 12:32:12,818 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.8 pTM=0.401 ipTM=0.223 tol=5.87
2024-07-08 12:32:30,504 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58 pTM=0.406 ipTM=0.234 tol=6.55
2024-07-08 12:32:48,186 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.7 pTM=0.402 ipTM=0.228 tol=4.59
2024-07-08 12:33:05,873 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.9 pTM=0.405 ipTM=0.234 tol=3.68
2024-07-08 12:33:23,550 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.8 pTM=0.404 ipTM=0.228 tol=5.64
2024-07-08 12:33:41,226 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58 pTM=0.403 ipTM=0.227 tol=7.43
2024-07-08 12:33:58,903 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.2 pTM=0.402 ipTM=0.21 tol=6.29
2024-07-08 12:34:16,578 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.5 pTM=0.402 ipTM=0.243 tol=5.92
2024-07-08 12:34:34,233 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.8 pTM=0.406 ipTM=0.234 tol=6.86
2024-07-08 12:34:34,234 alphafold2_multimer_v3_model_4_seed_000 took 548.1s (30 recycles)
2024-07-08 12:34:52,429 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.1 pTM=0.452 ipTM=0.314
2024-07-08 12:35:10,121 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.3 pTM=0.422 ipTM=0.237 tol=8.03
2024-07-08 12:35:27,826 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.2 pTM=0.416 ipTM=0.207 tol=4.6
2024-07-08 12:35:45,540 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=59.1 pTM=0.413 ipTM=0.224 tol=5.85
2024-07-08 12:36:03,266 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.8 pTM=0.411 ipTM=0.222 tol=2.5
2024-07-08 12:36:20,988 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.9 pTM=0.41 ipTM=0.216 tol=6.75
2024-07-08 12:36:38,694 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.1 pTM=0.42 ipTM=0.254 tol=8.11
2024-07-08 12:36:56,424 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.8 pTM=0.411 ipTM=0.221 tol=4.43
2024-07-08 12:37:14,155 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.7 pTM=0.409 ipTM=0.214 tol=5.38
2024-07-08 12:37:31,887 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.5 pTM=0.412 ipTM=0.234 tol=5.61
2024-07-08 12:37:49,620 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.9 pTM=0.404 ipTM=0.202 tol=3.09
2024-07-08 12:38:07,353 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.4 pTM=0.415 ipTM=0.242 tol=4.94
2024-07-08 12:38:25,097 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.9 pTM=0.406 ipTM=0.203 tol=4.54
2024-07-08 12:38:42,832 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.1 pTM=0.421 ipTM=0.256 tol=4.24
2024-07-08 12:39:00,579 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.9 pTM=0.406 ipTM=0.201 tol=6.93
2024-07-08 12:39:18,321 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.3 pTM=0.412 ipTM=0.226 tol=6.53
2024-07-08 12:39:36,062 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=58.6 pTM=0.405 ipTM=0.199 tol=4.17
2024-07-08 12:39:53,806 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59 pTM=0.408 ipTM=0.204 tol=5.12
2024-07-08 12:40:11,551 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.9 pTM=0.404 ipTM=0.183 tol=3.13
2024-07-08 12:40:29,293 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.1 pTM=0.407 ipTM=0.213 tol=6.02
2024-07-08 12:40:47,030 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=58.5 pTM=0.403 ipTM=0.198 tol=7.25
2024-07-08 12:41:04,760 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.4 pTM=0.403 ipTM=0.199 tol=6.43
2024-07-08 12:41:22,478 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.2 pTM=0.405 ipTM=0.206 tol=3.55
2024-07-08 12:41:40,211 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.5 pTM=0.404 ipTM=0.196 tol=3.19
2024-07-08 12:41:57,930 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=58.1 pTM=0.402 ipTM=0.208 tol=5.29
2024-07-08 12:42:15,657 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.4 pTM=0.403 ipTM=0.203 tol=3.98
2024-07-08 12:42:33,398 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.2 pTM=0.408 ipTM=0.22 tol=5.12
2024-07-08 12:42:51,122 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.7 pTM=0.401 ipTM=0.193 tol=4.57
2024-07-08 12:43:08,847 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.3 pTM=0.41 ipTM=0.218 tol=4.41
2024-07-08 12:43:26,568 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58.6 pTM=0.404 ipTM=0.201 tol=5.08
2024-07-08 12:43:44,303 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58.8 pTM=0.406 ipTM=0.202 tol=2.41
2024-07-08 12:43:44,304 alphafold2_multimer_v3_model_5_seed_000 took 549.5s (30 recycles)
2024-07-08 12:43:44,840 reranking models by 'multimer' metric
2024-07-08 12:43:47,168 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 12:45:01,802 Relaxation took 77.0s
2024-07-08 12:45:01,802 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.8 pTM=0.406 ipTM=0.234
2024-07-08 12:46:09,238 Relaxation took 67.4s
2024-07-08 12:46:09,238 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.5 pTM=0.414 ipTM=0.216
2024-07-08 12:47:39,423 Relaxation took 90.2s
2024-07-08 12:47:39,423 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.2 pTM=0.427 ipTM=0.205
2024-07-08 12:48:48,733 Relaxation took 69.3s
2024-07-08 12:48:48,733 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58.8 pTM=0.406 ipTM=0.202
2024-07-08 12:50:20,981 Relaxation took 92.2s
2024-07-08 12:50:20,981 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.2 pTM=0.413 ipTM=0.151
2024-07-08 12:50:22,638 Done