2024-07-08 12:49:45,363 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 12:49:45,687 Running on GPU
2024-07-08 12:49:50,266 Found 6 citations for tools or databases
2024-07-08 12:49:50,266 Query 1/1: AGRE3_SH3BG (length 891)
2024-07-08 12:49:50,730 Sleeping for 5s. Reason: PENDING
2024-07-08 12:49:56,144 Sleeping for 5s. Reason: RUNNING
2024-07-08 12:50:01,549 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:50:07,974 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:50:14,401 Sleeping for 10s. Reason: RUNNING
2024-07-08 12:50:24,828 Sleeping for 5s. Reason: RUNNING
2024-07-08 12:50:30,247 Sleeping for 10s. Reason: RUNNING
2024-07-08 12:50:40,680 Sleeping for 5s. Reason: RUNNING
2024-07-08 12:50:46,095 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:50:52,535 Sleeping for 8s. Reason: RUNNING
2024-07-08 12:51:00,954 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:51:07,386 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:51:13,807 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:51:20,226 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:51:26,641 Sleeping for 7s. Reason: RUNNING
2024-07-08 12:51:34,063 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:51:40,503 Sleeping for 9s. Reason: RUNNING
2024-07-08 12:51:49,938 Sleeping for 8s. Reason: RUNNING
2024-07-08 12:51:58,380 Sleeping for 8s. Reason: RUNNING
2024-07-08 12:52:06,797 Sleeping for 8s. Reason: RUNNING
2024-07-08 12:52:15,209 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:52:26,898 Sleeping for 5s. Reason: PENDING
2024-07-08 12:52:32,324 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:52:38,749 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:52:45,175 Sleeping for 7s. Reason: RUNNING
2024-07-08 12:52:52,616 Sleeping for 7s. Reason: RUNNING
2024-07-08 12:53:00,040 Sleeping for 7s. Reason: RUNNING
2024-07-08 12:53:07,486 Sleeping for 6s. Reason: RUNNING
2024-07-08 12:53:13,905 Sleeping for 5s. Reason: RUNNING
2024-07-08 12:53:19,871 Sleeping for 10s. Reason: RUNNING
2024-07-08 12:53:34,420 Setting max_seq=508, max_extra_seq=2048
2024-07-08 12:56:26,496 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.2 pTM=0.401 ipTM=0.184
2024-07-08 12:56:43,924 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.3 pTM=0.409 ipTM=0.194 tol=7.06
2024-07-08 12:57:01,415 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.1 pTM=0.405 ipTM=0.187 tol=3.29
2024-07-08 12:57:18,935 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.3 pTM=0.404 ipTM=0.189 tol=3.15
2024-07-08 12:57:36,523 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=66.2 pTM=0.401 ipTM=0.179 tol=3.33
2024-07-08 12:57:54,117 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.2 pTM=0.402 ipTM=0.185 tol=2.38
2024-07-08 12:58:11,755 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=66.2 pTM=0.4 ipTM=0.178 tol=2.62
2024-07-08 12:58:29,386 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.1 pTM=0.399 ipTM=0.185 tol=2.39
2024-07-08 12:58:47,041 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=65.9 pTM=0.397 ipTM=0.176 tol=1.76
2024-07-08 12:59:04,711 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.2 pTM=0.399 ipTM=0.179 tol=1.82
2024-07-08 12:59:22,383 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.3 pTM=0.398 ipTM=0.177 tol=2.59
2024-07-08 12:59:40,050 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.4 pTM=0.4 ipTM=0.185 tol=5.24
2024-07-08 12:59:57,754 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.3 pTM=0.398 ipTM=0.177 tol=2.57
2024-07-08 13:00:15,431 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.2 pTM=0.398 ipTM=0.182 tol=1.9
2024-07-08 13:00:33,117 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.2 pTM=0.395 ipTM=0.174 tol=1.72
2024-07-08 13:00:50,800 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.3 pTM=0.397 ipTM=0.179 tol=1.43
2024-07-08 13:01:08,477 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.1 pTM=0.394 ipTM=0.173 tol=4.2
2024-07-08 13:01:26,143 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66 pTM=0.396 ipTM=0.182 tol=1.17
2024-07-08 13:01:43,815 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66 pTM=0.394 ipTM=0.176 tol=1.47
2024-07-08 13:02:01,486 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.2 pTM=0.397 ipTM=0.181 tol=1.32
2024-07-08 13:02:19,163 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.1 pTM=0.397 ipTM=0.181 tol=2.38
2024-07-08 13:02:36,834 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.1 pTM=0.398 ipTM=0.187 tol=2.12
2024-07-08 13:02:54,502 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.1 pTM=0.396 ipTM=0.181 tol=1.28
2024-07-08 13:03:12,164 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.2 pTM=0.401 ipTM=0.193 tol=1.28
2024-07-08 13:03:29,847 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66 pTM=0.397 ipTM=0.184 tol=1.39
2024-07-08 13:03:47,507 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.2 pTM=0.403 ipTM=0.196 tol=1.08
2024-07-08 13:04:05,172 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.4 pTM=0.401 ipTM=0.19 tol=1.4
2024-07-08 13:04:22,836 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.4 pTM=0.404 ipTM=0.197 tol=0.758
2024-07-08 13:04:40,514 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.3 pTM=0.402 ipTM=0.192 tol=0.977
2024-07-08 13:04:58,180 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.2 pTM=0.403 ipTM=0.199 tol=0.906
2024-07-08 13:05:15,861 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.3 pTM=0.403 ipTM=0.19 tol=0.979
2024-07-08 13:05:15,862 alphafold2_multimer_v3_model_1_seed_000 took 696.7s (30 recycles)
2024-07-08 13:05:34,009 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=66.1 pTM=0.422 ipTM=0.257
2024-07-08 13:05:51,640 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=66.9 pTM=0.429 ipTM=0.23 tol=5.93
2024-07-08 13:06:09,305 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.1 pTM=0.426 ipTM=0.224 tol=3.55
2024-07-08 13:06:26,968 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=67.2 pTM=0.424 ipTM=0.262 tol=2.85
2024-07-08 13:06:44,640 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.8 pTM=0.424 ipTM=0.326 tol=1.32
2024-07-08 13:07:02,313 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.8 pTM=0.422 ipTM=0.304 tol=1.72
2024-07-08 13:07:19,991 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68 pTM=0.418 ipTM=0.264 tol=2
2024-07-08 13:07:37,670 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=67.8 pTM=0.414 ipTM=0.223 tol=3.54
2024-07-08 13:07:55,340 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=67.9 pTM=0.416 ipTM=0.208 tol=3.2
2024-07-08 13:08:13,018 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.2 pTM=0.415 ipTM=0.205 tol=1.78
2024-07-08 13:08:30,686 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.2 pTM=0.416 ipTM=0.203 tol=1.09
2024-07-08 13:08:48,364 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.2 pTM=0.417 ipTM=0.198 tol=1.27
2024-07-08 13:09:06,033 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.1 pTM=0.416 ipTM=0.194 tol=1.09
2024-07-08 13:09:23,714 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.1 pTM=0.413 ipTM=0.191 tol=0.848
2024-07-08 13:09:41,387 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.1 pTM=0.414 ipTM=0.193 tol=0.917
2024-07-08 13:09:59,068 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.1 pTM=0.411 ipTM=0.193 tol=0.968
2024-07-08 13:10:16,755 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.1 pTM=0.411 ipTM=0.194 tol=1.01
2024-07-08 13:10:34,437 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68 pTM=0.409 ipTM=0.194 tol=1.41
2024-07-08 13:10:52,120 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67.9 pTM=0.406 ipTM=0.195 tol=1.09
2024-07-08 13:11:09,811 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67.8 pTM=0.406 ipTM=0.197 tol=1.32
2024-07-08 13:11:27,505 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.1 pTM=0.409 ipTM=0.192 tol=1.28
2024-07-08 13:11:45,191 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68 pTM=0.408 ipTM=0.203 tol=1.13
2024-07-08 13:12:02,877 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=67.9 pTM=0.407 ipTM=0.204 tol=0.843
2024-07-08 13:12:20,540 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.1 pTM=0.411 ipTM=0.202 tol=1.09
2024-07-08 13:12:38,213 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=67.9 pTM=0.407 ipTM=0.196 tol=1.21
2024-07-08 13:12:55,882 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.2 pTM=0.411 ipTM=0.198 tol=0.805
2024-07-08 13:13:13,564 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.3 pTM=0.411 ipTM=0.195 tol=1.35
2024-07-08 13:13:31,235 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68 pTM=0.41 ipTM=0.206 tol=0.961
2024-07-08 13:13:48,915 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=67.9 pTM=0.407 ipTM=0.206 tol=0.875
2024-07-08 13:14:06,585 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=67.9 pTM=0.409 ipTM=0.192 tol=1.08
2024-07-08 13:14:24,266 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.2 pTM=0.41 ipTM=0.195 tol=0.898
2024-07-08 13:14:24,266 alphafold2_multimer_v3_model_2_seed_000 took 547.9s (30 recycles)
2024-07-08 13:14:42,390 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.8 pTM=0.429 ipTM=0.234
2024-07-08 13:15:00,034 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.4 pTM=0.428 ipTM=0.239 tol=6.55
2024-07-08 13:15:17,686 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=65.6 pTM=0.428 ipTM=0.262 tol=2.76
2024-07-08 13:15:35,352 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.2 pTM=0.427 ipTM=0.245 tol=2.82
2024-07-08 13:15:53,024 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.9 pTM=0.432 ipTM=0.246 tol=1.72
2024-07-08 13:16:10,682 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.8 pTM=0.431 ipTM=0.262 tol=1.52
2024-07-08 13:16:28,357 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.9 pTM=0.432 ipTM=0.259 tol=1.63
2024-07-08 13:16:46,025 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=65.4 pTM=0.424 ipTM=0.235 tol=1.2
2024-07-08 13:17:03,696 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=65.5 pTM=0.428 ipTM=0.245 tol=1.35
2024-07-08 13:17:21,365 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=65.5 pTM=0.426 ipTM=0.235 tol=1.53
2024-07-08 13:17:39,034 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=65.9 pTM=0.432 ipTM=0.258 tol=1.33
2024-07-08 13:17:56,707 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=65.8 pTM=0.429 ipTM=0.251 tol=1.44
2024-07-08 13:18:14,377 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=65.9 pTM=0.431 ipTM=0.246 tol=1.57
2024-07-08 13:18:32,043 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=65.3 pTM=0.424 ipTM=0.243 tol=1.33
2024-07-08 13:18:49,708 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=65.8 pTM=0.429 ipTM=0.246 tol=1.44
2024-07-08 13:19:07,370 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=65.6 pTM=0.426 ipTM=0.238 tol=1.23
2024-07-08 13:19:25,043 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=65.8 pTM=0.429 ipTM=0.249 tol=1.49
2024-07-08 13:19:42,708 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=65.3 pTM=0.424 ipTM=0.243 tol=1.48
2024-07-08 13:20:00,372 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=65.8 pTM=0.428 ipTM=0.24 tol=1.49
2024-07-08 13:20:18,023 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=65.2 pTM=0.427 ipTM=0.246 tol=1.52
2024-07-08 13:20:35,686 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=65.6 pTM=0.428 ipTM=0.244 tol=1.54
2024-07-08 13:20:53,352 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=65.5 pTM=0.425 ipTM=0.25 tol=1.26
2024-07-08 13:21:11,009 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=65.5 pTM=0.426 ipTM=0.248 tol=1.43
2024-07-08 13:21:28,684 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=65.5 pTM=0.426 ipTM=0.243 tol=1.72
2024-07-08 13:21:46,340 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=65.5 pTM=0.427 ipTM=0.243 tol=1.61
2024-07-08 13:22:03,996 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.1 pTM=0.431 ipTM=0.245 tol=2.54
2024-07-08 13:22:21,645 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=65.5 pTM=0.425 ipTM=0.236 tol=5.47
2024-07-08 13:22:39,298 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=65.9 pTM=0.429 ipTM=0.25 tol=3.1
2024-07-08 13:22:56,955 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=65.4 pTM=0.423 ipTM=0.24 tol=2.75
2024-07-08 13:23:14,598 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=65.6 pTM=0.427 ipTM=0.25 tol=2.69
2024-07-08 13:23:32,248 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=65.4 pTM=0.424 ipTM=0.236 tol=1.25
2024-07-08 13:23:32,249 alphafold2_multimer_v3_model_3_seed_000 took 547.5s (30 recycles)
2024-07-08 13:23:50,419 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63 pTM=0.406 ipTM=0.203
2024-07-08 13:24:08,066 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=63.9 pTM=0.408 ipTM=0.212 tol=14.9
2024-07-08 13:24:25,737 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.2 pTM=0.434 ipTM=0.265 tol=8
2024-07-08 13:24:43,412 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.9 pTM=0.429 ipTM=0.303 tol=3.34
2024-07-08 13:25:01,096 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.1 pTM=0.431 ipTM=0.294 tol=3.21
2024-07-08 13:25:18,788 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.9 pTM=0.431 ipTM=0.255 tol=1.76
2024-07-08 13:25:36,464 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.8 pTM=0.43 ipTM=0.25 tol=3.18
2024-07-08 13:25:54,167 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.6 pTM=0.425 ipTM=0.24 tol=2.71
2024-07-08 13:26:11,855 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.6 pTM=0.429 ipTM=0.265 tol=1.59
2024-07-08 13:26:29,549 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.9 pTM=0.429 ipTM=0.271 tol=1.23
2024-07-08 13:26:47,237 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.9 pTM=0.431 ipTM=0.273 tol=1.8
2024-07-08 13:27:04,940 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.1 pTM=0.432 ipTM=0.255 tol=1.97
2024-07-08 13:27:22,647 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=65 pTM=0.433 ipTM=0.25 tol=3.55
2024-07-08 13:27:40,337 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.8 pTM=0.428 ipTM=0.242 tol=2.83
2024-07-08 13:27:58,017 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.7 pTM=0.43 ipTM=0.247 tol=3.16
2024-07-08 13:28:15,709 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.8 pTM=0.425 ipTM=0.233 tol=3.86
2024-07-08 13:28:33,412 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.8 pTM=0.425 ipTM=0.234 tol=3.6
2024-07-08 13:28:51,103 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.7 pTM=0.426 ipTM=0.253 tol=4.56
2024-07-08 13:29:08,786 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.7 pTM=0.425 ipTM=0.246 tol=3.13
2024-07-08 13:29:26,454 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.7 pTM=0.424 ipTM=0.233 tol=3.88
2024-07-08 13:29:44,147 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.6 pTM=0.425 ipTM=0.248 tol=3.78
2024-07-08 13:30:01,816 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.9 pTM=0.424 ipTM=0.258 tol=3.39
2024-07-08 13:30:19,499 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.8 pTM=0.426 ipTM=0.275 tol=1.68
2024-07-08 13:30:37,175 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65 pTM=0.428 ipTM=0.278 tol=3.12
2024-07-08 13:30:54,870 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.9 pTM=0.428 ipTM=0.249 tol=3.24
2024-07-08 13:31:12,565 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.9 pTM=0.428 ipTM=0.249 tol=3.6
2024-07-08 13:31:30,251 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.9 pTM=0.427 ipTM=0.25 tol=2.73
2024-07-08 13:31:47,932 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=65 pTM=0.427 ipTM=0.275 tol=4.19
2024-07-08 13:32:05,620 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.8 pTM=0.426 ipTM=0.262 tol=2.91
2024-07-08 13:32:23,295 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.9 pTM=0.426 ipTM=0.246 tol=4.3
2024-07-08 13:32:40,979 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.9 pTM=0.426 ipTM=0.254 tol=3.55
2024-07-08 13:32:40,979 alphafold2_multimer_v3_model_4_seed_000 took 548.2s (30 recycles)
2024-07-08 13:32:59,182 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.6 pTM=0.421 ipTM=0.212
2024-07-08 13:33:16,867 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.9 pTM=0.437 ipTM=0.33 tol=5.27
2024-07-08 13:33:34,544 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=65.9 pTM=0.439 ipTM=0.33 tol=4.51
2024-07-08 13:33:52,216 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.8 pTM=0.436 ipTM=0.313 tol=1.75
2024-07-08 13:34:09,899 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.2 pTM=0.438 ipTM=0.337 tol=2.24
2024-07-08 13:34:27,598 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.3 pTM=0.438 ipTM=0.391 tol=2.41
2024-07-08 13:34:45,295 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.4 pTM=0.435 ipTM=0.399 tol=2.32
2024-07-08 13:35:02,979 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.1 pTM=0.434 ipTM=0.396 tol=1.88
2024-07-08 13:35:20,663 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.2 pTM=0.435 ipTM=0.401 tol=2.24
2024-07-08 13:35:38,339 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.4 pTM=0.436 ipTM=0.412 tol=1.9
2024-07-08 13:35:56,025 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.5 pTM=0.438 ipTM=0.412 tol=1.75
2024-07-08 13:36:13,701 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.6 pTM=0.441 ipTM=0.419 tol=1.14
2024-07-08 13:36:31,391 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.4 pTM=0.439 ipTM=0.411 tol=2.63
2024-07-08 13:36:49,079 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.4 pTM=0.437 ipTM=0.416 tol=2.09
2024-07-08 13:37:06,762 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.4 pTM=0.435 ipTM=0.417 tol=1.38
2024-07-08 13:37:24,444 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.8 pTM=0.439 ipTM=0.42 tol=1.41
2024-07-08 13:37:42,098 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.4 pTM=0.438 ipTM=0.417 tol=1.96
2024-07-08 13:37:59,761 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.2 pTM=0.437 ipTM=0.419 tol=0.851
2024-07-08 13:38:17,428 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.5 pTM=0.438 ipTM=0.415 tol=1.03
2024-07-08 13:38:35,100 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.4 pTM=0.44 ipTM=0.419 tol=2.31
2024-07-08 13:38:52,762 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.2 pTM=0.438 ipTM=0.416 tol=1.27
2024-07-08 13:39:10,437 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.3 pTM=0.437 ipTM=0.416 tol=1.08
2024-07-08 13:39:28,117 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.2 pTM=0.436 ipTM=0.415 tol=2.49
2024-07-08 13:39:45,784 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.2 pTM=0.438 ipTM=0.412 tol=2.28
2024-07-08 13:40:03,447 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.1 pTM=0.436 ipTM=0.406 tol=2.03
2024-07-08 13:40:21,120 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.3 pTM=0.442 ipTM=0.421 tol=2.19
2024-07-08 13:40:38,804 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.2 pTM=0.435 ipTM=0.413 tol=2.16
2024-07-08 13:40:56,479 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.4 pTM=0.438 ipTM=0.423 tol=1.06
2024-07-08 13:41:14,160 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.9 pTM=0.431 ipTM=0.409 tol=2.22
2024-07-08 13:41:31,833 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=65.9 pTM=0.434 ipTM=0.406 tol=1.27
2024-07-08 13:41:49,515 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.2 pTM=0.433 ipTM=0.41 tol=1.48
2024-07-08 13:41:49,516 alphafold2_multimer_v3_model_5_seed_000 took 548.0s (30 recycles)
2024-07-08 13:41:50,014 reranking models by 'multimer' metric
2024-07-08 13:41:53,260 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 13:43:01,211 Relaxation took 71.2s
2024-07-08 13:43:01,211 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.2 pTM=0.433 ipTM=0.41
2024-07-08 13:44:18,388 Relaxation took 77.2s
2024-07-08 13:44:18,388 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.9 pTM=0.426 ipTM=0.254
2024-07-08 13:45:37,001 Relaxation took 78.6s
2024-07-08 13:45:37,002 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=65.4 pTM=0.424 ipTM=0.236
2024-07-08 13:46:28,280 Relaxation took 51.3s
2024-07-08 13:46:28,280 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.2 pTM=0.41 ipTM=0.195
2024-07-08 13:47:21,333 Relaxation took 53.1s
2024-07-08 13:47:21,333 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.3 pTM=0.403 ipTM=0.19
2024-07-08 13:47:22,975 Done