2024-07-08 13:30:50,121 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 13:30:50,472 Running on GPU
2024-07-08 13:30:54,489 Found 6 citations for tools or databases
2024-07-08 13:30:54,489 Query 1/1: AMPD1_OPTN (length 1324)
2024-07-08 13:30:54,936 Sleeping for 9s. Reason: PENDING
2024-07-08 13:31:04,352 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:31:09,790 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:31:19,236 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:31:26,648 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:31:33,585 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:31:43,003 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:31:50,416 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:31:59,842 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:32:05,263 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:32:10,719 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:32:20,141 Sleeping for 10s. Reason: RUNNING
2024-07-08 13:32:30,581 Sleeping for 8s. Reason: RUNNING
2024-07-08 13:32:39,012 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:32:45,438 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:32:55,406 Sleeping for 9s. Reason: PENDING
2024-07-08 13:33:04,812 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:33:11,249 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:33:16,695 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:33:26,131 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:33:31,549 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:33:38,974 Sleeping for 10s. Reason: RUNNING
2024-07-08 13:33:49,399 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:33:55,826 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:34:03,781 Setting max_seq=508, max_extra_seq=2048
2024-07-08 13:36:58,931 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.3 pTM=0.573 ipTM=0.226
2024-07-08 13:37:45,224 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.7 pTM=0.57 ipTM=0.179 tol=6.22
2024-07-08 13:38:31,786 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.1 pTM=0.57 ipTM=0.165 tol=3.93
2024-07-08 13:39:18,382 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.3 pTM=0.575 ipTM=0.172 tol=3.34
2024-07-08 13:40:05,026 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.3 pTM=0.579 ipTM=0.171 tol=2.65
2024-07-08 13:40:51,793 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=62.3 pTM=0.579 ipTM=0.175 tol=2.79
2024-07-08 13:41:38,602 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=62.3 pTM=0.58 ipTM=0.177 tol=2.29
2024-07-08 13:42:25,379 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.4 pTM=0.579 ipTM=0.172 tol=1.42
2024-07-08 13:43:12,106 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.4 pTM=0.581 ipTM=0.178 tol=1.46
2024-07-08 13:43:58,829 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.3 pTM=0.578 ipTM=0.182 tol=1.26
2024-07-08 13:44:45,612 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=62.4 pTM=0.579 ipTM=0.182 tol=1.7
2024-07-08 13:45:32,388 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.4 pTM=0.58 ipTM=0.181 tol=1.46
2024-07-08 13:46:19,164 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.2 pTM=0.579 ipTM=0.181 tol=1.02
2024-07-08 13:47:05,909 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.4 pTM=0.581 ipTM=0.178 tol=1.43
2024-07-08 13:47:52,597 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.2 pTM=0.579 ipTM=0.178 tol=1.36
2024-07-08 13:48:39,241 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.3 pTM=0.579 ipTM=0.175 tol=0.808
2024-07-08 13:49:25,932 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.5 pTM=0.581 ipTM=0.177 tol=1.19
2024-07-08 13:50:12,816 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.6 pTM=0.581 ipTM=0.177 tol=0.996
2024-07-08 13:50:59,526 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.6 pTM=0.581 ipTM=0.18 tol=1.28
2024-07-08 13:51:46,444 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.6 pTM=0.58 ipTM=0.175 tol=1.24
2024-07-08 13:52:33,160 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.5 pTM=0.581 ipTM=0.18 tol=1.36
2024-07-08 13:53:19,896 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.6 pTM=0.581 ipTM=0.185 tol=1.29
2024-07-08 13:54:06,640 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.5 pTM=0.579 ipTM=0.179 tol=1.16
2024-07-08 13:54:53,360 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.6 pTM=0.582 ipTM=0.188 tol=0.969
2024-07-08 13:55:40,065 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.6 pTM=0.581 ipTM=0.187 tol=1.06
2024-07-08 13:56:26,768 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.5 pTM=0.581 ipTM=0.185 tol=1.29
2024-07-08 13:57:13,481 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=62.3 pTM=0.58 ipTM=0.191 tol=1.08
2024-07-08 13:58:00,185 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.6 pTM=0.581 ipTM=0.2 tol=1.56
2024-07-08 13:58:46,921 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=62.7 pTM=0.584 ipTM=0.243 tol=1.47
2024-07-08 13:59:33,675 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63 pTM=0.59 ipTM=0.495 tol=3.11
2024-07-08 14:00:20,430 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.1 pTM=0.599 ipTM=0.568 tol=4.17
2024-07-08 14:00:20,432 alphafold2_multimer_v3_model_1_seed_000 took 1571.6s (30 recycles)
2024-07-08 14:01:08,189 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61 pTM=0.572 ipTM=0.233
2024-07-08 14:01:54,973 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.6 pTM=0.573 ipTM=0.193 tol=8.55
2024-07-08 14:02:41,800 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.2 pTM=0.577 ipTM=0.235 tol=6.53
2024-07-08 14:03:28,654 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.9 pTM=0.579 ipTM=0.192 tol=3.69
2024-07-08 14:04:15,523 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.4 pTM=0.577 ipTM=0.198 tol=5.13
2024-07-08 14:05:02,363 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.6 pTM=0.577 ipTM=0.202 tol=3.3
2024-07-08 14:05:49,118 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.6 pTM=0.573 ipTM=0.189 tol=8.13
2024-07-08 14:06:35,908 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.4 pTM=0.575 ipTM=0.188 tol=4.29
2024-07-08 14:07:22,777 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.5 pTM=0.573 ipTM=0.185 tol=7.5
2024-07-08 14:08:09,652 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.2 pTM=0.573 ipTM=0.19 tol=3.05
2024-07-08 14:08:56,541 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.1 pTM=0.572 ipTM=0.193 tol=1.87
2024-07-08 14:09:43,467 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.3 pTM=0.574 ipTM=0.194 tol=2.06
2024-07-08 14:10:30,294 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.2 pTM=0.572 ipTM=0.191 tol=2.19
2024-07-08 14:11:17,092 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.4 pTM=0.575 ipTM=0.188 tol=2.23
2024-07-08 14:12:03,929 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.2 pTM=0.571 ipTM=0.179 tol=2.54
2024-07-08 14:12:50,816 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.5 pTM=0.575 ipTM=0.179 tol=1.61
2024-07-08 14:13:37,725 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.3 pTM=0.573 ipTM=0.174 tol=1.79
2024-07-08 14:14:24,665 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.7 pTM=0.574 ipTM=0.175 tol=1.09
2024-07-08 14:15:11,586 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.5 pTM=0.573 ipTM=0.177 tol=1.86
2024-07-08 14:15:58,519 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.5 pTM=0.573 ipTM=0.177 tol=1.31
2024-07-08 14:16:45,409 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.6 pTM=0.571 ipTM=0.167 tol=1.87
2024-07-08 14:17:32,251 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.7 pTM=0.573 ipTM=0.173 tol=1.55
2024-07-08 14:18:19,015 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.6 pTM=0.571 ipTM=0.176 tol=3.14
2024-07-08 14:19:05,797 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.9 pTM=0.575 ipTM=0.18 tol=2.71
2024-07-08 14:19:52,535 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.7 pTM=0.572 ipTM=0.174 tol=2.25
2024-07-08 14:20:39,302 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.9 pTM=0.574 ipTM=0.175 tol=1.93
2024-07-08 14:21:26,066 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.2 pTM=0.572 ipTM=0.171 tol=1.47
2024-07-08 14:22:12,876 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65 pTM=0.573 ipTM=0.173 tol=2.11
2024-07-08 14:22:59,718 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.8 pTM=0.573 ipTM=0.175 tol=1.51
2024-07-08 14:23:46,546 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.4 pTM=0.573 ipTM=0.174 tol=1.78
2024-07-08 14:24:33,364 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.6 pTM=0.572 ipTM=0.178 tol=1.61
2024-07-08 14:24:33,366 alphafold2_multimer_v3_model_2_seed_000 took 1451.9s (30 recycles)
2024-07-08 14:25:21,182 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.7 pTM=0.576 ipTM=0.439
2024-07-08 14:26:07,943 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.9 pTM=0.57 ipTM=0.163 tol=14.2
2024-07-08 14:26:54,787 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=62.7 pTM=0.585 ipTM=0.171 tol=8.34
2024-07-08 14:27:41,714 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61.9 pTM=0.577 ipTM=0.167 tol=6.04
2024-07-08 14:28:28,587 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.3 pTM=0.577 ipTM=0.17 tol=7.27
2024-07-08 14:29:15,399 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.1 pTM=0.576 ipTM=0.172 tol=5.27
2024-07-08 14:30:02,215 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.2 pTM=0.575 ipTM=0.175 tol=3.99
2024-07-08 14:30:49,007 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.7 pTM=0.573 ipTM=0.17 tol=7.58
2024-07-08 14:31:35,694 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.5 pTM=0.574 ipTM=0.172 tol=3.97
2024-07-08 14:32:22,453 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62 pTM=0.573 ipTM=0.17 tol=7.45
2024-07-08 14:33:09,175 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=62.2 pTM=0.575 ipTM=0.17 tol=7.29
2024-07-08 14:33:55,906 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=62.7 pTM=0.576 ipTM=0.169 tol=7.63
2024-07-08 14:34:42,617 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.4 pTM=0.576 ipTM=0.172 tol=10.7
2024-07-08 14:35:29,366 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=62.2 pTM=0.576 ipTM=0.17 tol=10.2
2024-07-08 14:36:16,108 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62.2 pTM=0.578 ipTM=0.173 tol=7.65
2024-07-08 14:37:02,820 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63 pTM=0.575 ipTM=0.17 tol=6.48
2024-07-08 14:37:49,660 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63 pTM=0.578 ipTM=0.172 tol=5.14
2024-07-08 14:38:36,373 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.4 pTM=0.578 ipTM=0.173 tol=7.55
2024-07-08 14:39:23,074 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=62.6 pTM=0.582 ipTM=0.208 tol=10.5
2024-07-08 14:40:09,797 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62.3 pTM=0.577 ipTM=0.175 tol=7.51
2024-07-08 14:40:56,617 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=62.8 pTM=0.579 ipTM=0.171 tol=7.41
2024-07-08 14:41:43,433 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63 pTM=0.577 ipTM=0.165 tol=2.67
2024-07-08 14:42:30,188 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.2 pTM=0.577 ipTM=0.166 tol=2.8
2024-07-08 14:43:16,968 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.1 pTM=0.577 ipTM=0.165 tol=3.73
2024-07-08 14:44:03,736 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.4 pTM=0.577 ipTM=0.162 tol=3.74
2024-07-08 14:44:50,573 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.3 pTM=0.577 ipTM=0.166 tol=2.17
2024-07-08 14:45:37,448 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.9 pTM=0.577 ipTM=0.165 tol=3.26
2024-07-08 14:46:24,318 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.9 pTM=0.575 ipTM=0.169 tol=3.11
2024-07-08 14:47:11,212 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.2 pTM=0.575 ipTM=0.165 tol=2.54
2024-07-08 14:47:58,088 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.1 pTM=0.576 ipTM=0.166 tol=2.76
2024-07-08 14:48:44,984 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.1 pTM=0.576 ipTM=0.164 tol=3.9
2024-07-08 14:48:44,985 alphafold2_multimer_v3_model_3_seed_000 took 1450.6s (30 recycles)
2024-07-08 14:49:32,856 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.7 pTM=0.571 ipTM=0.253
2024-07-08 14:50:19,826 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=59.1 pTM=0.562 ipTM=0.167 tol=10.9
2024-07-08 14:51:06,959 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.6 pTM=0.567 ipTM=0.16 tol=17.1
2024-07-08 14:51:53,944 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.2 pTM=0.567 ipTM=0.167 tol=11.4
2024-07-08 14:52:40,952 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.7 pTM=0.569 ipTM=0.18 tol=9.15
2024-07-08 14:53:27,862 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.9 pTM=0.567 ipTM=0.183 tol=4.65
2024-07-08 14:54:14,749 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.6 pTM=0.565 ipTM=0.165 tol=5.43
2024-07-08 14:55:01,562 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.5 pTM=0.564 ipTM=0.166 tol=6.21
2024-07-08 14:55:48,383 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.4 pTM=0.565 ipTM=0.162 tol=2.58
2024-07-08 14:56:35,225 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61.1 pTM=0.563 ipTM=0.163 tol=3.47
2024-07-08 14:57:22,033 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61.7 pTM=0.564 ipTM=0.164 tol=4.68
2024-07-08 14:58:08,851 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=61.5 pTM=0.565 ipTM=0.168 tol=2.72
2024-07-08 14:58:55,706 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.8 pTM=0.564 ipTM=0.172 tol=4.66
2024-07-08 14:59:42,540 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.6 pTM=0.566 ipTM=0.186 tol=6.59
2024-07-08 15:00:29,666 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.2 pTM=0.563 ipTM=0.165 tol=6.53
2024-07-08 15:01:16,592 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.1 pTM=0.564 ipTM=0.168 tol=5.48
2024-07-08 15:02:03,423 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.4 pTM=0.562 ipTM=0.168 tol=5
2024-07-08 15:02:50,234 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.8 pTM=0.564 ipTM=0.167 tol=4.56
2024-07-08 15:03:37,100 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.5 pTM=0.566 ipTM=0.164 tol=5.71
2024-07-08 15:04:23,916 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.1 pTM=0.566 ipTM=0.169 tol=5.38
2024-07-08 15:05:10,779 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.5 pTM=0.567 ipTM=0.178 tol=6.16
2024-07-08 15:05:57,711 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.2 pTM=0.567 ipTM=0.182 tol=6.92
2024-07-08 15:06:44,681 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.7 pTM=0.566 ipTM=0.173 tol=6.55
2024-07-08 15:07:31,605 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62 pTM=0.567 ipTM=0.167 tol=5.02
2024-07-08 15:08:18,523 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=61.6 pTM=0.565 ipTM=0.167 tol=6.18
2024-07-08 15:09:05,441 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62 pTM=0.565 ipTM=0.173 tol=5.59
2024-07-08 15:09:52,291 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61.7 pTM=0.566 ipTM=0.177 tol=5.26
2024-07-08 15:10:39,184 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62 pTM=0.567 ipTM=0.183 tol=6.23
2024-07-08 15:11:26,109 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.6 pTM=0.565 ipTM=0.182 tol=6.24
2024-07-08 15:12:12,983 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.5 pTM=0.565 ipTM=0.173 tol=3.4
2024-07-08 15:12:59,803 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.9 pTM=0.564 ipTM=0.172 tol=3.96
2024-07-08 15:12:59,805 alphafold2_multimer_v3_model_4_seed_000 took 1453.8s (30 recycles)
2024-07-08 15:13:47,565 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.1 pTM=0.563 ipTM=0.196
2024-07-08 15:14:34,405 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.3 pTM=0.561 ipTM=0.154 tol=8.24
2024-07-08 15:15:21,272 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.8 pTM=0.567 ipTM=0.162 tol=5.41
2024-07-08 15:16:08,103 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.7 pTM=0.575 ipTM=0.162 tol=5.26
2024-07-08 15:16:54,969 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.1 pTM=0.571 ipTM=0.164 tol=4.4
2024-07-08 15:17:41,854 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.1 pTM=0.573 ipTM=0.166 tol=3.58
2024-07-08 15:18:28,696 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.3 pTM=0.574 ipTM=0.172 tol=5.54
2024-07-08 15:19:15,550 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.4 pTM=0.575 ipTM=0.171 tol=4.98
2024-07-08 15:20:02,363 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.2 pTM=0.575 ipTM=0.168 tol=7.01
2024-07-08 15:20:49,205 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63 pTM=0.575 ipTM=0.159 tol=3.64
2024-07-08 15:21:36,063 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.8 pTM=0.574 ipTM=0.163 tol=5.05
2024-07-08 15:22:22,930 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.2 pTM=0.574 ipTM=0.166 tol=6.32
2024-07-08 15:23:09,762 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.8 pTM=0.575 ipTM=0.159 tol=2.97
2024-07-08 15:23:56,641 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.9 pTM=0.574 ipTM=0.16 tol=4.61
2024-07-08 15:24:43,474 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.2 pTM=0.574 ipTM=0.163 tol=2.65
2024-07-08 15:25:30,310 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.1 pTM=0.575 ipTM=0.163 tol=4.41
2024-07-08 15:26:17,233 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.8 pTM=0.575 ipTM=0.163 tol=2.89
2024-07-08 15:27:04,244 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.3 pTM=0.576 ipTM=0.164 tol=3.21
2024-07-08 15:27:51,254 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.8 pTM=0.575 ipTM=0.164 tol=3.19
2024-07-08 15:28:38,178 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.1 pTM=0.575 ipTM=0.161 tol=2.95
2024-07-08 15:29:25,037 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.2 pTM=0.575 ipTM=0.162 tol=1.83
2024-07-08 15:30:11,959 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.1 pTM=0.576 ipTM=0.171 tol=2.68
2024-07-08 15:30:58,845 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.1 pTM=0.575 ipTM=0.177 tol=2.79
2024-07-08 15:31:45,694 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.1 pTM=0.576 ipTM=0.186 tol=3.17
2024-07-08 15:32:32,463 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.8 pTM=0.577 ipTM=0.185 tol=5.64
2024-07-08 15:33:19,289 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63 pTM=0.577 ipTM=0.193 tol=3.18
2024-07-08 15:34:06,104 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.3 pTM=0.578 ipTM=0.198 tol=4.91
2024-07-08 15:34:52,896 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63 pTM=0.577 ipTM=0.185 tol=3.26
2024-07-08 15:35:39,689 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.2 pTM=0.576 ipTM=0.189 tol=2.79
2024-07-08 15:36:26,472 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.2 pTM=0.576 ipTM=0.19 tol=2.75
2024-07-08 15:37:13,293 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63 pTM=0.575 ipTM=0.186 tol=2.19
2024-07-08 15:37:13,294 alphafold2_multimer_v3_model_5_seed_000 took 1452.4s (30 recycles)
2024-07-08 15:37:14,346 reranking models by 'multimer' metric
2024-07-08 15:37:17,982 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 15:39:19,397 Relaxation took 125.1s
2024-07-08 15:39:19,398 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.1 pTM=0.599 ipTM=0.568
2024-07-08 15:41:28,157 Relaxation took 128.8s
2024-07-08 15:41:28,157 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63 pTM=0.575 ipTM=0.186
2024-07-08 15:43:35,501 Relaxation took 127.3s
2024-07-08 15:43:35,501 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.6 pTM=0.572 ipTM=0.178
2024-07-08 15:46:32,313 Relaxation took 176.8s
2024-07-08 15:46:32,314 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.9 pTM=0.564 ipTM=0.172
2024-07-08 15:48:30,859 Relaxation took 118.5s
2024-07-08 15:48:30,859 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.1 pTM=0.576 ipTM=0.164
2024-07-08 15:48:33,529 Done