2024-07-08 13:32:25,329 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-07-08 13:32:25,675 Running on GPU
2024-07-08 13:32:29,667 Found 6 citations for tools or databases
2024-07-08 13:32:29,667 Query 1/1: AMY1B_EPHA5 (length 1548)
2024-07-08 13:32:30,119 Sleeping for 8s. Reason: PENDING
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2024-07-08 13:34:06,100 Sleeping for 6s. Reason: RUNNING
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2024-07-08 13:36:37,913 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:36:44,346 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:36:53,765 Sleeping for 10s. Reason: RUNNING
2024-07-08 13:37:04,184 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:37:13,614 Sleeping for 6s. Reason: RUNNING
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2024-07-08 13:37:25,478 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:37:32,897 Sleeping for 6s. Reason: RUNNING
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2024-07-08 13:38:32,984 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:39:33,169 Sleeping for 8s. Reason: PENDING
2024-07-08 13:39:41,606 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:39:47,031 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:39:52,448 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:39:58,874 Sleeping for 10s. Reason: RUNNING
2024-07-08 13:40:09,329 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:40:16,747 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:40:26,182 Sleeping for 8s. Reason: RUNNING
2024-07-08 13:40:34,613 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:40:42,038 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:40:48,449 Sleeping for 8s. Reason: RUNNING
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2024-07-08 13:41:44,387 Sleeping for 6s. Reason: RUNNING
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2024-07-08 13:42:14,095 Sleeping for 8s. Reason: RUNNING
2024-07-08 13:42:22,541 Sleeping for 8s. Reason: RUNNING
2024-07-08 13:42:31,476 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:42:37,901 Sleeping for 9s. Reason: RUNNING
2024-07-08 13:42:47,340 Sleeping for 8s. Reason: RUNNING
2024-07-08 13:42:55,762 Sleeping for 7s. Reason: RUNNING
2024-07-08 13:43:03,182 Sleeping for 10s. Reason: RUNNING
2024-07-08 13:43:14,098 Sleeping for 8s. Reason: RUNNING
2024-07-08 13:43:22,523 Sleeping for 10s. Reason: RUNNING
2024-07-08 13:43:32,951 Sleeping for 8s. Reason: RUNNING
2024-07-08 13:43:41,380 Sleeping for 5s. Reason: RUNNING
2024-07-08 13:43:46,810 Sleeping for 6s. Reason: RUNNING
2024-07-08 13:43:53,218 Sleeping for 10s. Reason: RUNNING
2024-07-08 13:44:11,584 Setting max_seq=508, max_extra_seq=2048
2024-07-08 13:47:36,559 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=75.1 pTM=0.432 ipTM=0.188
2024-07-08 13:48:48,356 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=75 pTM=0.432 ipTM=0.186 tol=13.3
2024-07-08 13:50:00,169 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=75.6 pTM=0.431 ipTM=0.187 tol=6.5
2024-07-08 13:51:12,010 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=75 pTM=0.432 ipTM=0.205 tol=18.2
2024-07-08 13:52:23,834 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=76 pTM=0.432 ipTM=0.192 tol=12
2024-07-08 13:53:35,655 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=75.3 pTM=0.433 ipTM=0.2 tol=7.41
2024-07-08 13:54:47,401 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=75.5 pTM=0.439 ipTM=0.227 tol=5.95
2024-07-08 13:55:59,217 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=75.4 pTM=0.432 ipTM=0.194 tol=4.03
2024-07-08 13:57:10,997 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=75.7 pTM=0.435 ipTM=0.202 tol=3.42
2024-07-08 13:58:22,795 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=75.4 pTM=0.432 ipTM=0.204 tol=2.48
2024-07-08 13:59:34,575 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=75.6 pTM=0.435 ipTM=0.202 tol=2.72
2024-07-08 14:00:46,376 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=75.7 pTM=0.435 ipTM=0.211 tol=2.65
2024-07-08 14:01:58,183 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=75.3 pTM=0.44 ipTM=0.23 tol=4.36
2024-07-08 14:03:09,996 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=75.7 pTM=0.433 ipTM=0.206 tol=3.57
2024-07-08 14:04:21,780 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=75.2 pTM=0.442 ipTM=0.255 tol=4.26
2024-07-08 14:05:33,604 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=75.5 pTM=0.433 ipTM=0.203 tol=3.81
2024-07-08 14:06:45,400 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=75.7 pTM=0.434 ipTM=0.199 tol=3.09
2024-07-08 14:07:57,205 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=75.6 pTM=0.433 ipTM=0.198 tol=3.3
2024-07-08 14:09:08,999 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=76.2 pTM=0.436 ipTM=0.206 tol=5.46
2024-07-08 14:10:20,807 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=75.7 pTM=0.433 ipTM=0.209 tol=5.41
2024-07-08 14:11:32,563 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=76.1 pTM=0.44 ipTM=0.237 tol=3.95
2024-07-08 14:12:44,381 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=75.8 pTM=0.431 ipTM=0.206 tol=4.44
2024-07-08 14:13:56,164 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=75.2 pTM=0.434 ipTM=0.221 tol=9.41
2024-07-08 14:15:08,003 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=75.6 pTM=0.431 ipTM=0.203 tol=7.22
2024-07-08 14:16:19,820 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=76.1 pTM=0.433 ipTM=0.196 tol=5.57
2024-07-08 14:17:31,630 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=75.6 pTM=0.433 ipTM=0.208 tol=4.18
2024-07-08 14:18:43,390 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=75.9 pTM=0.437 ipTM=0.213 tol=3.25
2024-07-08 14:19:55,167 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=75.6 pTM=0.437 ipTM=0.221 tol=2.3
2024-07-08 14:21:06,930 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=76 pTM=0.442 ipTM=0.234 tol=1.93
2024-07-08 14:22:18,697 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=75.6 pTM=0.435 ipTM=0.216 tol=3.32
2024-07-08 14:23:30,498 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=75.9 pTM=0.434 ipTM=0.199 tol=3.62
2024-07-08 14:23:30,499 alphafold2_multimer_v3_model_1_seed_000 took 2353.9s (30 recycles)
2024-07-08 14:24:43,784 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=74.9 pTM=0.427 ipTM=0.172
2024-07-08 14:25:55,711 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=77.4 pTM=0.505 ipTM=0.681 tol=18.6
2024-07-08 14:27:07,549 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=78.3 pTM=0.514 ipTM=0.667 tol=11.4
2024-07-08 14:28:19,364 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=78.5 pTM=0.514 ipTM=0.663 tol=5.11
2024-07-08 14:29:31,186 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=78.4 pTM=0.512 ipTM=0.681 tol=1.88
2024-07-08 14:30:43,009 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=78.6 pTM=0.514 ipTM=0.698 tol=2.38
2024-07-08 14:31:54,836 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=78.4 pTM=0.512 ipTM=0.687 tol=1.23
2024-07-08 14:33:06,663 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=78.6 pTM=0.509 ipTM=0.688 tol=1.73
2024-07-08 14:34:18,479 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=78.5 pTM=0.512 ipTM=0.686 tol=0.824
2024-07-08 14:35:30,322 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=78.5 pTM=0.511 ipTM=0.689 tol=1.99
2024-07-08 14:36:42,131 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=78.8 pTM=0.514 ipTM=0.694 tol=1.85
2024-07-08 14:37:53,931 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=78.4 pTM=0.514 ipTM=0.704 tol=1.2
2024-07-08 14:39:05,751 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=78.4 pTM=0.512 ipTM=0.679 tol=1.95
2024-07-08 14:40:17,575 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=78.6 pTM=0.512 ipTM=0.69 tol=0.771
2024-07-08 14:41:29,377 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=78.6 pTM=0.513 ipTM=0.693 tol=1.94
2024-07-08 14:42:41,159 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=78.4 pTM=0.507 ipTM=0.672 tol=0.94
2024-07-08 14:43:52,934 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=78.4 pTM=0.511 ipTM=0.689 tol=1.9
2024-07-08 14:45:04,732 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=78.6 pTM=0.51 ipTM=0.69 tol=1.42
2024-07-08 14:46:16,529 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=78.4 pTM=0.511 ipTM=0.676 tol=1.69
2024-07-08 14:47:28,322 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=78.4 pTM=0.508 ipTM=0.669 tol=0.883
2024-07-08 14:48:40,118 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=78.5 pTM=0.512 ipTM=0.694 tol=1.73
2024-07-08 14:49:51,912 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=78.4 pTM=0.517 ipTM=0.696 tol=1.05
2024-07-08 14:51:03,685 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=78.6 pTM=0.515 ipTM=0.694 tol=1.71
2024-07-08 14:52:15,464 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=78.6 pTM=0.509 ipTM=0.684 tol=1.34
2024-07-08 14:53:27,245 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=78.5 pTM=0.512 ipTM=0.685 tol=1.51
2024-07-08 14:54:39,051 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=78.3 pTM=0.509 ipTM=0.68 tol=0.959
2024-07-08 14:55:50,864 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=78.4 pTM=0.509 ipTM=0.677 tol=2.08
2024-07-08 14:57:02,658 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=78.6 pTM=0.508 ipTM=0.668 tol=1.84
2024-07-08 14:58:14,433 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=78.4 pTM=0.509 ipTM=0.68 tol=2.42
2024-07-08 14:59:26,211 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=78.4 pTM=0.508 ipTM=0.67 tol=2.22
2024-07-08 15:00:38,003 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=78.4 pTM=0.51 ipTM=0.673 tol=0.97
2024-07-08 15:00:38,005 alphafold2_multimer_v3_model_2_seed_000 took 2226.1s (30 recycles)
2024-07-08 15:01:51,521 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=76.8 pTM=0.418 ipTM=0.167
2024-07-08 15:03:03,478 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=76.2 pTM=0.427 ipTM=0.175 tol=21.5
2024-07-08 15:04:15,376 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=76.2 pTM=0.427 ipTM=0.196 tol=14.2
2024-07-08 15:05:27,213 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=75.9 pTM=0.425 ipTM=0.17 tol=10
2024-07-08 15:06:39,065 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=76.5 pTM=0.424 ipTM=0.178 tol=8.14
2024-07-08 15:07:50,932 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=76.1 pTM=0.427 ipTM=0.172 tol=7.8
2024-07-08 15:09:02,768 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=76.2 pTM=0.428 ipTM=0.186 tol=8.27
2024-07-08 15:10:14,559 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=76.8 pTM=0.429 ipTM=0.205 tol=7.19
2024-07-08 15:11:26,399 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=76.2 pTM=0.429 ipTM=0.201 tol=7.92
2024-07-08 15:12:38,245 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=76.4 pTM=0.427 ipTM=0.185 tol=10
2024-07-08 15:13:50,062 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=76.7 pTM=0.426 ipTM=0.186 tol=5
2024-07-08 15:15:01,968 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=76.9 pTM=0.422 ipTM=0.171 tol=3.69
2024-07-08 15:16:13,783 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=76.4 pTM=0.428 ipTM=0.182 tol=6.89
2024-07-08 15:17:25,609 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=76.9 pTM=0.425 ipTM=0.176 tol=2.8
2024-07-08 15:18:37,400 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=76.9 pTM=0.426 ipTM=0.188 tol=1.74
2024-07-08 15:19:49,275 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=76.8 pTM=0.423 ipTM=0.171 tol=2.75
2024-07-08 15:21:01,066 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=76.6 pTM=0.428 ipTM=0.19 tol=4.48
2024-07-08 15:22:12,895 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=77 pTM=0.424 ipTM=0.176 tol=3.69
2024-07-08 15:23:24,717 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=76.8 pTM=0.425 ipTM=0.183 tol=2.73
2024-07-08 15:24:36,580 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=76.5 pTM=0.424 ipTM=0.175 tol=5.55
2024-07-08 15:25:48,355 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=76.6 pTM=0.427 ipTM=0.183 tol=3.91
2024-07-08 15:27:00,233 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76.9 pTM=0.425 ipTM=0.177 tol=3.15
2024-07-08 15:28:12,017 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.7 pTM=0.428 ipTM=0.191 tol=3.85
2024-07-08 15:29:23,912 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=76.8 pTM=0.423 ipTM=0.174 tol=4.38
2024-07-08 15:30:35,708 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76.6 pTM=0.428 ipTM=0.189 tol=4.42
2024-07-08 15:31:47,591 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=76.8 pTM=0.423 ipTM=0.169 tol=5.94
2024-07-08 15:32:59,378 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=76.6 pTM=0.428 ipTM=0.183 tol=6.01
2024-07-08 15:34:11,227 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=76.8 pTM=0.425 ipTM=0.175 tol=6.79
2024-07-08 15:35:23,076 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=76.7 pTM=0.422 ipTM=0.174 tol=3.58
2024-07-08 15:36:34,927 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=76.5 pTM=0.424 ipTM=0.175 tol=9.09
2024-07-08 15:37:46,729 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=76.6 pTM=0.425 ipTM=0.175 tol=4.31
2024-07-08 15:37:46,730 alphafold2_multimer_v3_model_3_seed_000 took 2227.3s (30 recycles)
2024-07-08 15:39:00,114 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=74.1 pTM=0.426 ipTM=0.188
2024-07-08 15:40:12,140 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=74.9 pTM=0.424 ipTM=0.184 tol=16.4
2024-07-08 15:41:24,103 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=75.8 pTM=0.421 ipTM=0.175 tol=13.2
2024-07-08 15:42:36,064 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=75.3 pTM=0.421 ipTM=0.17 tol=6.01
2024-07-08 15:43:48,037 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=75.7 pTM=0.42 ipTM=0.171 tol=3.42
2024-07-08 15:45:00,032 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=75.4 pTM=0.422 ipTM=0.174 tol=4.99
2024-07-08 15:46:11,890 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=75.9 pTM=0.453 ipTM=0.352 tol=10.9
2024-07-08 15:47:23,640 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=76.9 pTM=0.493 ipTM=0.525 tol=5.08
2024-07-08 15:48:35,371 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=76.8 pTM=0.498 ipTM=0.542 tol=2.34
2024-07-08 15:49:47,109 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=77 pTM=0.507 ipTM=0.584 tol=2.36
2024-07-08 15:50:58,845 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=77.5 pTM=0.525 ipTM=0.641 tol=2.27
2024-07-08 15:52:10,556 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=77.4 pTM=0.534 ipTM=0.679 tol=2.42
2024-07-08 15:53:22,275 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=77.6 pTM=0.541 ipTM=0.703 tol=1.21
2024-07-08 15:54:33,988 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=77.6 pTM=0.542 ipTM=0.713 tol=1.72
2024-07-08 15:55:45,701 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=77.4 pTM=0.546 ipTM=0.728 tol=2.06
2024-07-08 15:56:57,438 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=77.6 pTM=0.549 ipTM=0.739 tol=1.84
2024-07-08 15:58:09,183 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=77.6 pTM=0.536 ipTM=0.688 tol=1.85
2024-07-08 15:59:20,913 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=77.4 pTM=0.537 ipTM=0.698 tol=1.1
2024-07-08 16:00:32,654 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=77.3 pTM=0.536 ipTM=0.695 tol=1.92
2024-07-08 16:01:44,375 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=77.4 pTM=0.537 ipTM=0.7 tol=2.37
2024-07-08 16:02:56,111 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=77.6 pTM=0.544 ipTM=0.723 tol=2.86
2024-07-08 16:04:07,857 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=77.7 pTM=0.552 ipTM=0.761 tol=2.48
2024-07-08 16:05:19,585 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=77.9 pTM=0.562 ipTM=0.798 tol=2.07
2024-07-08 16:06:31,306 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=77.9 pTM=0.568 ipTM=0.816 tol=1.06
2024-07-08 16:07:43,060 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=77.9 pTM=0.569 ipTM=0.822 tol=1.92
2024-07-08 16:08:54,803 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=77.8 pTM=0.573 ipTM=0.836 tol=1.4
2024-07-08 16:10:06,547 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=77.6 pTM=0.575 ipTM=0.841 tol=2.54
2024-07-08 16:11:18,292 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=78 pTM=0.575 ipTM=0.845 tol=1.76
2024-07-08 16:12:30,036 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=77.9 pTM=0.578 ipTM=0.849 tol=1.23
2024-07-08 16:13:41,772 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=77.9 pTM=0.579 ipTM=0.854 tol=2.57
2024-07-08 16:14:53,506 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=77.8 pTM=0.578 ipTM=0.851 tol=2.85
2024-07-08 16:14:53,508 alphafold2_multimer_v3_model_4_seed_000 took 2225.3s (30 recycles)
2024-07-08 16:16:06,818 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=74.4 pTM=0.423 ipTM=0.172
2024-07-08 16:17:18,639 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=74.9 pTM=0.437 ipTM=0.256 tol=16.1
2024-07-08 16:18:30,437 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=76.2 pTM=0.446 ipTM=0.289 tol=8.89
2024-07-08 16:19:42,146 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=77.1 pTM=0.49 ipTM=0.549 tol=5.02
2024-07-08 16:20:53,838 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=77.7 pTM=0.53 ipTM=0.667 tol=6.36
2024-07-08 16:22:05,505 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=77.8 pTM=0.536 ipTM=0.701 tol=3.56
2024-07-08 16:23:17,173 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=77.8 pTM=0.544 ipTM=0.723 tol=3.51
2024-07-08 16:24:28,834 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=77.8 pTM=0.548 ipTM=0.74 tol=3.38
2024-07-08 16:25:40,468 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=78 pTM=0.553 ipTM=0.754 tol=2.1
2024-07-08 16:26:52,097 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=77.8 pTM=0.55 ipTM=0.747 tol=1.98
2024-07-08 16:28:03,737 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=78 pTM=0.553 ipTM=0.752 tol=2.64
2024-07-08 16:29:15,394 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=78.1 pTM=0.557 ipTM=0.772 tol=4.59
2024-07-08 16:30:27,038 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=77.8 pTM=0.559 ipTM=0.782 tol=4.23
2024-07-08 16:31:38,666 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=78 pTM=0.555 ipTM=0.769 tol=2.26
2024-07-08 16:32:50,313 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=78 pTM=0.557 ipTM=0.779 tol=3.12
2024-07-08 16:34:02,008 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=78.1 pTM=0.563 ipTM=0.8 tol=2.82
2024-07-08 16:35:13,661 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=78 pTM=0.561 ipTM=0.792 tol=4.77
2024-07-08 16:36:25,326 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=78.1 pTM=0.562 ipTM=0.792 tol=3.45
2024-07-08 16:37:36,950 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=78.1 pTM=0.561 ipTM=0.787 tol=3.36
2024-07-08 16:38:48,592 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=77.9 pTM=0.562 ipTM=0.792 tol=3.15
2024-07-08 16:40:00,219 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=78.2 pTM=0.563 ipTM=0.8 tol=2.22
2024-07-08 16:41:11,855 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=78.1 pTM=0.562 ipTM=0.79 tol=5.32
2024-07-08 16:42:23,475 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=78.1 pTM=0.561 ipTM=0.786 tol=3.07
2024-07-08 16:43:35,068 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=77.7 pTM=0.559 ipTM=0.77 tol=2.7
2024-07-08 16:44:46,693 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=77.8 pTM=0.553 ipTM=0.76 tol=4.02
2024-07-08 16:45:58,315 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=77.8 pTM=0.554 ipTM=0.759 tol=4.8
2024-07-08 16:47:09,938 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=77.8 pTM=0.557 ipTM=0.767 tol=1.55
2024-07-08 16:48:21,576 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=77.9 pTM=0.556 ipTM=0.77 tol=2.24
2024-07-08 16:49:33,190 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=77.9 pTM=0.562 ipTM=0.786 tol=2.6
2024-07-08 16:50:44,818 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=77.9 pTM=0.561 ipTM=0.793 tol=4.45
2024-07-08 16:51:56,464 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=77.9 pTM=0.562 ipTM=0.794 tol=4.1
2024-07-08 16:51:56,466 alphafold2_multimer_v3_model_5_seed_000 took 2221.5s (30 recycles)
2024-07-08 16:51:57,877 reranking models by 'multimer' metric
2024-07-08 16:52:00,637 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-07-08 16:55:07,228 Relaxation took 189.4s
2024-07-08 16:55:07,229 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=77.8 pTM=0.578 ipTM=0.851
2024-07-08 17:20:34,957 Relaxation took 1527.7s
2024-07-08 17:20:34,957 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=77.9 pTM=0.562 ipTM=0.794
2024-07-08 17:21:50,122 Relaxation took 75.2s
2024-07-08 17:21:50,122 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=78.4 pTM=0.51 ipTM=0.673
2024-07-08 17:25:28,713 Relaxation took 218.6s
2024-07-08 17:25:28,714 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=75.9 pTM=0.434 ipTM=0.199
2024-07-08 17:28:47,565 Relaxation took 198.8s
2024-07-08 17:28:47,565 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=76.6 pTM=0.425 ipTM=0.175
2024-07-08 17:28:51,058 Done