2024-07-08 13:44:39,448 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-07-08 13:44:39,783 Running on GPU 2024-07-08 13:44:43,607 Found 6 citations for tools or databases 2024-07-08 13:44:43,607 Query 1/1: ANFY1_CLD23 (length 1461) 2024-07-08 13:44:44,091 Sleeping for 8s. Reason: PENDING 2024-07-08 13:44:52,515 Sleeping for 8s. Reason: RUNNING 2024-07-08 13:45:00,924 Sleeping for 9s. Reason: RUNNING 2024-07-08 13:45:10,352 Sleeping for 5s. Reason: RUNNING 2024-07-08 13:45:15,799 Sleeping for 7s. Reason: RUNNING 2024-07-08 13:45:23,210 Sleeping for 10s. Reason: RUNNING 2024-07-08 13:45:33,623 Sleeping for 9s. Reason: RUNNING 2024-07-08 13:45:43,045 Sleeping for 7s. Reason: RUNNING 2024-07-08 13:45:50,458 Sleeping for 6s. Reason: RUNNING 2024-07-08 13:45:56,891 Sleeping for 5s. Reason: RUNNING 2024-07-08 13:46:02,308 Sleeping for 9s. Reason: RUNNING 2024-07-08 13:46:11,720 Sleeping for 6s. Reason: RUNNING 2024-07-08 13:46:18,138 Sleeping for 10s. Reason: RUNNING 2024-07-08 13:46:28,561 Sleeping for 8s. Reason: RUNNING 2024-07-08 13:46:36,991 Sleeping for 7s. Reason: RUNNING 2024-07-08 13:46:44,421 Sleeping for 5s. Reason: RUNNING 2024-07-08 13:46:49,843 Sleeping for 9s. Reason: RUNNING 2024-07-08 13:46:59,268 Sleeping for 8s. Reason: RUNNING 2024-07-08 13:47:07,694 Sleeping for 10s. Reason: RUNNING 2024-07-08 13:47:21,549 Sleeping for 8s. Reason: PENDING 2024-07-08 13:47:30,446 Sleeping for 7s. Reason: RUNNING 2024-07-08 13:47:37,869 Sleeping for 10s. Reason: RUNNING 2024-07-08 13:47:48,297 Sleeping for 5s. Reason: RUNNING 2024-07-08 13:47:53,727 Sleeping for 7s. Reason: RUNNING 2024-07-08 13:48:01,140 Sleeping for 5s. Reason: RUNNING 2024-07-08 13:48:06,593 Sleeping for 8s. Reason: RUNNING 2024-07-08 13:48:15,004 Sleeping for 9s. Reason: RUNNING 2024-07-08 13:48:24,438 Sleeping for 8s. Reason: RUNNING 2024-07-08 13:48:32,856 Sleeping for 10s. Reason: RUNNING 2024-07-08 13:48:43,560 Sleeping for 5s. Reason: RUNNING 2024-07-08 13:48:48,984 Sleeping for 6s. Reason: RUNNING 2024-07-08 13:48:55,399 Sleeping for 6s. Reason: RUNNING 2024-07-08 13:49:01,826 Sleeping for 8s. Reason: RUNNING 2024-07-08 13:49:10,245 Sleeping for 7s. Reason: RUNNING 2024-07-08 13:49:22,720 Setting max_seq=508, max_extra_seq=2048 2024-07-08 13:53:15,687 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=78.6 pTM=0.477 ipTM=0.151 2024-07-08 13:54:16,965 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=79.4 pTM=0.485 ipTM=0.168 tol=8.39 2024-07-08 13:55:18,448 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=79.4 pTM=0.484 ipTM=0.166 tol=5.32 2024-07-08 13:56:20,011 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=79.3 pTM=0.48 ipTM=0.17 tol=3.83 2024-07-08 13:57:21,581 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=79.6 pTM=0.479 ipTM=0.172 tol=3.78 2024-07-08 13:58:23,048 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=79.6 pTM=0.483 ipTM=0.18 tol=2.14 2024-07-08 13:59:24,523 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=79.6 pTM=0.491 ipTM=0.183 tol=2.79 2024-07-08 14:00:25,942 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=80.1 pTM=0.491 ipTM=0.188 tol=1.78 2024-07-08 14:01:27,336 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=79.8 pTM=0.489 ipTM=0.19 tol=1.39 2024-07-08 14:02:28,779 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=79.8 pTM=0.483 ipTM=0.187 tol=1.68 2024-07-08 14:03:30,321 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=79.6 pTM=0.48 ipTM=0.188 tol=1.59 2024-07-08 14:04:31,759 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=79.9 pTM=0.488 ipTM=0.189 tol=4.23 2024-07-08 14:05:33,219 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=79.6 pTM=0.477 ipTM=0.188 tol=1.05 2024-07-08 14:06:34,648 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=79.7 pTM=0.483 ipTM=0.185 tol=1.88 2024-07-08 14:07:36,052 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=79.5 pTM=0.478 ipTM=0.19 tol=1.03 2024-07-08 14:08:37,479 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=79.7 pTM=0.481 ipTM=0.193 tol=3.54 2024-07-08 14:09:38,907 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=79.7 pTM=0.484 ipTM=0.19 tol=3.08 2024-07-08 14:10:40,316 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=79.9 pTM=0.49 ipTM=0.19 tol=1.79 2024-07-08 14:11:41,701 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=79.6 pTM=0.487 ipTM=0.195 tol=1.45 2024-07-08 14:12:43,124 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=79.6 pTM=0.482 ipTM=0.192 tol=1.48 2024-07-08 14:13:44,573 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=79.7 pTM=0.482 ipTM=0.192 tol=3.39 2024-07-08 14:14:46,041 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=79.6 pTM=0.482 ipTM=0.19 tol=1.12 2024-07-08 14:15:47,478 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=79.6 pTM=0.486 ipTM=0.187 tol=0.958 2024-07-08 14:16:48,907 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=79.8 pTM=0.489 ipTM=0.189 tol=2.78 2024-07-08 14:17:50,361 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=79.9 pTM=0.491 ipTM=0.192 tol=1.52 2024-07-08 14:18:51,761 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=80.1 pTM=0.499 ipTM=0.193 tol=1.83 2024-07-08 14:19:53,194 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=79.8 pTM=0.49 ipTM=0.19 tol=2.39 2024-07-08 14:20:54,661 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=79.5 pTM=0.48 ipTM=0.192 tol=2.42 2024-07-08 14:21:56,078 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=79.8 pTM=0.491 ipTM=0.196 tol=2.8 2024-07-08 14:22:57,495 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=79.6 pTM=0.482 ipTM=0.191 tol=1.66 2024-07-08 14:23:58,956 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=79.3 pTM=0.481 ipTM=0.187 tol=1.64 2024-07-08 14:23:58,958 alphafold2_multimer_v3_model_1_seed_000 took 2071.2s (30 recycles) 2024-07-08 14:25:01,728 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=80.1 pTM=0.511 ipTM=0.171 2024-07-08 14:26:03,279 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=81.2 pTM=0.51 ipTM=0.167 tol=11.2 2024-07-08 14:27:04,893 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=81.5 pTM=0.505 ipTM=0.164 tol=6.24 2024-07-08 14:28:06,593 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=81.4 pTM=0.493 ipTM=0.161 tol=4.71 2024-07-08 14:29:08,128 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=81.8 pTM=0.495 ipTM=0.161 tol=5.18 2024-07-08 14:30:09,682 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=81.4 pTM=0.49 ipTM=0.16 tol=2.34 2024-07-08 14:31:11,216 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=81.6 pTM=0.5 ipTM=0.159 tol=2.27 2024-07-08 14:32:12,706 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=81.6 pTM=0.496 ipTM=0.159 tol=1.75 2024-07-08 14:33:14,208 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=81.9 pTM=0.501 ipTM=0.161 tol=1.64 2024-07-08 14:34:15,851 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=81.8 pTM=0.49 ipTM=0.159 tol=2.62 2024-07-08 14:35:17,403 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=81.4 pTM=0.489 ipTM=0.158 tol=2.32 2024-07-08 14:36:18,966 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=81.6 pTM=0.492 ipTM=0.158 tol=2.17 2024-07-08 14:37:20,577 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=81.4 pTM=0.487 ipTM=0.157 tol=2.18 2024-07-08 14:38:22,188 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=81.5 pTM=0.489 ipTM=0.157 tol=1.36 2024-07-08 14:39:23,771 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=81.7 pTM=0.493 ipTM=0.159 tol=1.61 2024-07-08 14:40:25,364 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=81.5 pTM=0.49 ipTM=0.159 tol=1.17 2024-07-08 14:41:26,962 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=81.7 pTM=0.491 ipTM=0.159 tol=1.19 2024-07-08 14:42:28,566 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=81.9 pTM=0.498 ipTM=0.162 tol=1.1 2024-07-08 14:43:30,117 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=81.6 pTM=0.492 ipTM=0.161 tol=2.2 2024-07-08 14:44:31,663 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=81.4 pTM=0.488 ipTM=0.16 tol=1.8 2024-07-08 14:45:33,247 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=81.6 pTM=0.491 ipTM=0.16 tol=1.6 2024-07-08 14:46:34,872 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=81.6 pTM=0.488 ipTM=0.159 tol=1.69 2024-07-08 14:47:36,435 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=81.4 pTM=0.486 ipTM=0.16 tol=1.18 2024-07-08 14:48:37,996 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=81.7 pTM=0.493 ipTM=0.159 tol=0.851 2024-07-08 14:49:39,583 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=81.8 pTM=0.498 ipTM=0.161 tol=1.22 2024-07-08 14:50:41,204 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=81.8 pTM=0.501 ipTM=0.161 tol=1.72 2024-07-08 14:51:42,755 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=81.8 pTM=0.498 ipTM=0.161 tol=2.03 2024-07-08 14:52:44,314 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=81.4 pTM=0.49 ipTM=0.159 tol=1.36 2024-07-08 14:53:45,868 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=81.7 pTM=0.496 ipTM=0.161 tol=2.24 2024-07-08 14:54:47,464 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=81.4 pTM=0.488 ipTM=0.159 tol=2.67 2024-07-08 14:55:49,024 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=81.4 pTM=0.489 ipTM=0.158 tol=2.61 2024-07-08 14:55:49,026 alphafold2_multimer_v3_model_2_seed_000 took 1908.8s (30 recycles) 2024-07-08 14:56:51,868 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=77.6 pTM=0.493 ipTM=0.157 2024-07-08 14:57:53,435 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=80.1 pTM=0.496 ipTM=0.167 tol=8.06 2024-07-08 14:58:55,022 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=80.3 pTM=0.491 ipTM=0.156 tol=6.14 2024-07-08 14:59:56,619 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=80.4 pTM=0.489 ipTM=0.158 tol=4.66 2024-07-08 15:00:58,247 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=80.4 pTM=0.486 ipTM=0.154 tol=4.08 2024-07-08 15:01:59,877 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=80.2 pTM=0.486 ipTM=0.158 tol=1.67 2024-07-08 15:03:01,492 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=80.1 pTM=0.482 ipTM=0.149 tol=13.8 2024-07-08 15:04:03,092 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=80.4 pTM=0.487 ipTM=0.155 tol=6.61 2024-07-08 15:05:04,707 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=80.6 pTM=0.49 ipTM=0.161 tol=6.29 2024-07-08 15:06:06,440 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=80.4 pTM=0.483 ipTM=0.16 tol=4.27 2024-07-08 15:07:08,046 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=80.1 pTM=0.483 ipTM=0.166 tol=6.2 2024-07-08 15:08:09,646 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=80.1 pTM=0.486 ipTM=0.167 tol=3.69 2024-07-08 15:09:11,239 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=80.2 pTM=0.488 ipTM=0.168 tol=3.1 2024-07-08 15:10:12,835 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=80.1 pTM=0.489 ipTM=0.17 tol=4.16 2024-07-08 15:11:14,423 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=80.2 pTM=0.489 ipTM=0.17 tol=1.31 2024-07-08 15:12:16,018 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=80.1 pTM=0.487 ipTM=0.172 tol=1.99 2024-07-08 15:13:17,626 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=80.1 pTM=0.485 ipTM=0.176 tol=4.1 2024-07-08 15:14:19,162 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=80.2 pTM=0.491 ipTM=0.172 tol=3.56 2024-07-08 15:15:20,748 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=79.9 pTM=0.484 ipTM=0.172 tol=1.88 2024-07-08 15:16:22,374 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=80.2 pTM=0.487 ipTM=0.17 tol=4.6 2024-07-08 15:17:23,991 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=80.3 pTM=0.489 ipTM=0.166 tol=3.54 2024-07-08 15:18:25,570 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=80.3 pTM=0.488 ipTM=0.162 tol=3.31 2024-07-08 15:19:27,142 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=80.1 pTM=0.483 ipTM=0.158 tol=9.97 2024-07-08 15:20:28,708 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=80.6 pTM=0.492 ipTM=0.157 tol=7.31 2024-07-08 15:21:30,295 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=80.3 pTM=0.485 ipTM=0.16 tol=6.13 2024-07-08 15:22:31,858 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=80.6 pTM=0.493 ipTM=0.167 tol=2.3 2024-07-08 15:23:33,444 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=80.2 pTM=0.486 ipTM=0.171 tol=4.11 2024-07-08 15:24:35,064 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=80.1 pTM=0.479 ipTM=0.169 tol=1.58 2024-07-08 15:25:36,641 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=80.2 pTM=0.486 ipTM=0.176 tol=2.47 2024-07-08 15:26:38,206 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=80.3 pTM=0.489 ipTM=0.18 tol=2.4 2024-07-08 15:27:39,870 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=80.1 pTM=0.481 ipTM=0.176 tol=1.21 2024-07-08 15:27:39,872 alphafold2_multimer_v3_model_3_seed_000 took 1909.6s (30 recycles) 2024-07-08 15:28:42,753 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=77.1 pTM=0.496 ipTM=0.15 2024-07-08 15:29:44,379 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=79.5 pTM=0.497 ipTM=0.147 tol=27.1 2024-07-08 15:30:45,934 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=80.6 pTM=0.513 ipTM=0.157 tol=12.6 2024-07-08 15:31:47,534 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=80.6 pTM=0.507 ipTM=0.158 tol=5.18 2024-07-08 15:32:49,135 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=81.1 pTM=0.508 ipTM=0.158 tol=7.83 2024-07-08 15:33:50,738 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=80.8 pTM=0.507 ipTM=0.159 tol=4.07 2024-07-08 15:34:52,295 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=80.9 pTM=0.51 ipTM=0.159 tol=6.12 2024-07-08 15:35:53,779 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=80.9 pTM=0.51 ipTM=0.159 tol=3.81 2024-07-08 15:36:55,258 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=81.3 pTM=0.516 ipTM=0.161 tol=3.26 2024-07-08 15:37:56,779 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=80.9 pTM=0.505 ipTM=0.16 tol=2.4 2024-07-08 15:38:58,266 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=80.8 pTM=0.505 ipTM=0.161 tol=1.84 2024-07-08 15:39:59,764 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=81.1 pTM=0.511 ipTM=0.159 tol=1.44 2024-07-08 15:41:01,267 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=81.2 pTM=0.515 ipTM=0.161 tol=1.36 2024-07-08 15:42:02,857 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=80.8 pTM=0.506 ipTM=0.161 tol=1.51 2024-07-08 15:43:04,355 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=81.2 pTM=0.512 ipTM=0.16 tol=1.32 2024-07-08 15:44:05,842 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=80.9 pTM=0.506 ipTM=0.161 tol=1.36 2024-07-08 15:45:07,363 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=80.9 pTM=0.506 ipTM=0.16 tol=1.64 2024-07-08 15:46:08,902 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=81.2 pTM=0.51 ipTM=0.16 tol=2.34 2024-07-08 15:47:10,422 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=80.8 pTM=0.506 ipTM=0.16 tol=3.8 2024-07-08 15:48:11,913 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=80.8 pTM=0.504 ipTM=0.161 tol=4.38 2024-07-08 15:49:13,396 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=81.2 pTM=0.511 ipTM=0.16 tol=2.26 2024-07-08 15:50:14,896 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=80.9 pTM=0.507 ipTM=0.159 tol=2.54 2024-07-08 15:51:16,492 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=80.8 pTM=0.508 ipTM=0.16 tol=2.32 2024-07-08 15:52:17,996 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=81.3 pTM=0.516 ipTM=0.16 tol=3.28 2024-07-08 15:53:19,502 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=81 pTM=0.509 ipTM=0.16 tol=4.23 2024-07-08 15:54:20,990 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=81.4 pTM=0.516 ipTM=0.161 tol=5.93 2024-07-08 15:55:22,488 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=81.1 pTM=0.512 ipTM=0.161 tol=4.99 2024-07-08 15:56:23,994 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=80.9 pTM=0.506 ipTM=0.159 tol=3.17 2024-07-08 15:57:25,536 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=80.9 pTM=0.503 ipTM=0.159 tol=3.51 2024-07-08 15:58:27,060 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=80.9 pTM=0.509 ipTM=0.16 tol=5.63 2024-07-08 15:59:28,569 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=80.9 pTM=0.505 ipTM=0.159 tol=5.82 2024-07-08 15:59:28,571 alphafold2_multimer_v3_model_4_seed_000 took 1907.4s (30 recycles) 2024-07-08 16:00:31,374 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=79.2 pTM=0.517 ipTM=0.151 2024-07-08 16:01:32,883 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=79.7 pTM=0.484 ipTM=0.154 tol=9.89 2024-07-08 16:02:34,430 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=80.2 pTM=0.495 ipTM=0.153 tol=9.02 2024-07-08 16:03:35,913 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=80.2 pTM=0.491 ipTM=0.159 tol=4.4 2024-07-08 16:04:37,383 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=80.7 pTM=0.501 ipTM=0.162 tol=3.22 2024-07-08 16:05:38,915 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=80.4 pTM=0.494 ipTM=0.16 tol=3.39 2024-07-08 16:06:40,462 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=80.5 pTM=0.5 ipTM=0.159 tol=2.55 2024-07-08 16:07:41,955 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=80.4 pTM=0.498 ipTM=0.163 tol=2.18 2024-07-08 16:08:43,480 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=80.8 pTM=0.507 ipTM=0.165 tol=2.6 2024-07-08 16:09:45,017 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=80.5 pTM=0.495 ipTM=0.163 tol=2.02 2024-07-08 16:10:46,558 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=80.2 pTM=0.491 ipTM=0.162 tol=3.19 2024-07-08 16:11:48,074 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=80.6 pTM=0.499 ipTM=0.165 tol=1.39 2024-07-08 16:12:49,630 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=80.2 pTM=0.493 ipTM=0.163 tol=1.59 2024-07-08 16:13:51,165 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=80.2 pTM=0.494 ipTM=0.163 tol=2.5 2024-07-08 16:14:52,723 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=80.8 pTM=0.504 ipTM=0.161 tol=2.32 2024-07-08 16:15:54,260 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=80.3 pTM=0.494 ipTM=0.163 tol=1.67 2024-07-08 16:16:55,770 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=80.3 pTM=0.493 ipTM=0.163 tol=1.76 2024-07-08 16:17:57,276 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=80.6 pTM=0.502 ipTM=0.162 tol=1.86 2024-07-08 16:18:58,799 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=80.3 pTM=0.494 ipTM=0.163 tol=1.93 2024-07-08 16:20:00,335 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=80.2 pTM=0.49 ipTM=0.16 tol=2.51 2024-07-08 16:21:01,903 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=80.6 pTM=0.497 ipTM=0.161 tol=1.31 2024-07-08 16:22:03,451 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=80.3 pTM=0.492 ipTM=0.161 tol=1.85 2024-07-08 16:23:04,972 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=80.1 pTM=0.492 ipTM=0.161 tol=1.12 2024-07-08 16:24:06,517 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=80.9 pTM=0.512 ipTM=0.161 tol=2.05 2024-07-08 16:25:08,014 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=80.4 pTM=0.497 ipTM=0.163 tol=2.09 2024-07-08 16:26:09,453 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=80.5 pTM=0.504 ipTM=0.165 tol=1.63 2024-07-08 16:27:10,882 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=80.6 pTM=0.506 ipTM=0.16 tol=1.13 2024-07-08 16:28:12,323 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=80.1 pTM=0.488 ipTM=0.161 tol=2.28 2024-07-08 16:29:13,765 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=80.2 pTM=0.492 ipTM=0.16 tol=2.7 2024-07-08 16:30:15,244 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=80 pTM=0.49 ipTM=0.163 tol=2.01 2024-07-08 16:31:16,756 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=80.1 pTM=0.492 ipTM=0.164 tol=2.01 2024-07-08 16:31:16,758 alphafold2_multimer_v3_model_5_seed_000 took 1906.9s (30 recycles) 2024-07-08 16:31:18,016 reranking models by 'multimer' metric 2024-07-08 16:31:19,474 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-07-08 16:32:50,376 Relaxation took 92.4s 2024-07-08 16:32:50,376 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=79.3 pTM=0.481 ipTM=0.187 2024-07-08 16:34:57,295 Relaxation took 126.9s 2024-07-08 16:34:57,295 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=80.1 pTM=0.481 ipTM=0.176 2024-07-08 16:36:29,022 Relaxation took 91.7s 2024-07-08 16:36:29,022 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=80.1 pTM=0.492 ipTM=0.164 2024-07-08 16:38:42,002 Relaxation took 133.0s 2024-07-08 16:38:42,002 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=80.9 pTM=0.505 ipTM=0.159 2024-07-08 16:40:56,709 Relaxation took 134.7s 2024-07-08 16:40:56,709 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=81.4 pTM=0.489 ipTM=0.158 2024-07-08 16:40:59,962 Done